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Lourdes Migura Antimicrobial consumption and emergence of cephalosporin resistant Escherichia coli and Salmonella in pigs

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Sponsor Day: Seminar on Animal Feeding 15th-16th May 2014 IRTA Mas Bover

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Page 1: Sponsor Day on animal feeding: Antimicrobial consumption and emergence of cephalosporin resistant Escherichia coli and Salmonella in pigs

Lourdes Migura

Antimicrobial consumption and emergence of

cephalosporin resistant Escherichia coli and Salmonella in pigs

Page 2: Sponsor Day on animal feeding: Antimicrobial consumption and emergence of cephalosporin resistant Escherichia coli and Salmonella in pigs

Consumption of antimicrobials

ANTIMICROBIALS (mg/PCU)Tetracycline: 35.9Penicillins: 21.2 Polymyxins: 10.5 Macrolides: 7.6 Lincosamides: 7.5 Pleuromutilins: 4.4 Aminoglycosides: 3.8 (Fluoro)quinolones: 3.41 Sulfonamides: 2.5 Others: 2.1 Amphenicols: 0.5 Trimethoprims: 0.4 3rd-4th gen. cephalosporins: 0.1 (1.5 tonnes)

Sales active ingredient (tonnes)

1,000 Tonnes PCU (food producing animals)

mg/PCU (mg/kg of

meat)Italy 1,663 4,497 370

Spain 1,779 7,135 249Germany 1,819 8,600 211Hungary 147 767 192Belgium 297 1,695 175Portugal 164 1,016 161Poland 471 3,929 120France 896 7,643 117

Netherlands 363 3,186 114Czech Rep 61 732 83

Austria 53 977 54UK 344 6,724 51

Ireland 87 1,770 49Denmark 106 2,479 43Finland 12 520 24Sweden 11 835 13.6Norway 6.2 1,680 3.7

Population correction unit (PCU): multiplying numbers of livestock animals (dairy cows, sheep, sows and horses) and slaughtered animals (cattle, pigs, lambs, poultry and turkeys) by the theoretical weightat the time most likely for treatment

Data obtained from the 3rd ESVAC report (EMA 2011)

Page 3: Sponsor Day on animal feeding: Antimicrobial consumption and emergence of cephalosporin resistant Escherichia coli and Salmonella in pigs

OBJECTIVES

To evaluate the possible association between consumption of different antimicrobials (b-lactams, cephalosporins and other unrelated antimicrobial compounds) and occurrence of cephalosporin resistant (CR) E. coli and Salmonella enterica

To assess if the animals are a real reservoir of cephalosporin resistance genes that can spread to the community via the food chain

To characterize both, the resistant population and the genetic determinants coding for resistance genes

Page 4: Sponsor Day on animal feeding: Antimicrobial consumption and emergence of cephalosporin resistant Escherichia coli and Salmonella in pigs

• 1st treatment: seven day-old piglets, 6 visits, day 0 (pre-treatment) and days 2, 7, 21, 41 post-treatment

• 2nd treatment: fattening period, 7 visits, day 0 (pre-treatment) and days 2, 7, 14, 22, 45 y 73 (age of 4 to 6 months aprox.)

2nd treatment N=92

Group 1 controln=20

Group 2 Amoxicillin

n=26

Group 4 Ceft+ Amoxi

n=26

Group 3Ceftiofurn=20

+amoxi 10mg/kg lifeweigt/day (14 days)

+amoxi 10mg/kg lifeweight/day (14 days)

1st treatmentN=100

Control group n=50

Ceftiofur group n=50 7 day-old piglets

Page 5: Sponsor Day on animal feeding: Antimicrobial consumption and emergence of cephalosporin resistant Escherichia coli and Salmonella in pigs

RESULTSSampling days

Age (days)

Positive animals in the control group (N=50*)

Positive animals in the treated group (N=50)

0 6-8 5 (10%) 6 (12%)

2 8-10 5 (10%) 13 (26%)

7 13-15 1 (2%) 0

14 20-22 1 (2%) 4 (8%)

21 27-29 0 0

41 47-49 0 0

Positive animals in each group after amoxi treatment

Sampling days

Age (days)

Group 1Control(N=20)

Group 2Amoxi(N=26)

Group 3 Ceftiofur(N=20)

Group 4Amox+Ceft

(N=26)

0 70 0 0 0 0

2 72 0 2 (8%) 0 0

7 77 0 7 (27%) 0 0

14 84 0 1 (4%) 0 0

22 115 0 0 0 1 (4%)

45 138 0 1 (4%) 0 0

73 155 0 0 0 0

p=0.03

Fisher test p=0.02

Page 6: Sponsor Day on animal feeding: Antimicrobial consumption and emergence of cephalosporin resistant Escherichia coli and Salmonella in pigs

RESULTSDice (Opt:1.50%) (Tol 1.5%-1.5%) (H>0.0% S>0.0%) [0.0%-100.0%]PFGE E. coli

100

95908580757065

PFGE E. coli

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E1V4C90

E1V1C17a

E1V2C100a

E1V1C80a

E1V2C55a

E1V2C70a

E1V2C35a

E1V1C63a

E1V1C75a

E1V2C72a

E1V2C73a

E1V4C80a

E1V1C97a

E1V2C97a

E1V4C29b

E1V3C29a

E1V1C26a

E1V1C27a

E1V1C28a

E1V1C29a

E1V2C26a

E1V2C27a

E1V2C29c

E1V2C30a

E1V2C96a

E1V1C96a

E1V1C59a

E1V1C65a

E2V6C29c

E1V2C93b

E2V5C75c

E1V4C89c

E2V3C47b

E2V2C31a

E2V3C34b

E2V3C35b

E2V3C40b

E2V2C32c

E2V3C32c

E2V3C33b

E2V3C41c

E2V4C33a

E1V4C59c

E1V4C64a

E1V2C52a

E1V2C53c

E1V2C62a

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A

D

A

B1

B1

B1

A

A

A

A

A

A

B1

B1

A

A

A

A

A

A

A

A

A

B1

B1

A

A

A

A

B1

A

A

A

A

A

A

A

A

A

A

A

A

B1

B1

B1

B1

D

TEM-1

TEM-1,CTXM-14

TEM-1

TEM-1, SHV-12

TEM-1b, SHV-12

TEM-1, SHV-12

TEM-1

TEM-1,CTXM-9

TEM-1,CTXM-9

TEM-1,CTXM-9

TEM-1,CTXM-9

TEM-1,CTXM-1

TEM-1

TEM-1

TEM-1,CTXM-1

TEM-1,CTXM-1

TEM-1,CTXM-1

TEM-1,CTXM-1

TEM-1,CTXM-1

TEM-1,CTXM-1

TEM-1,CTXM-1

TEM-1,CTXM-1

TEM-1,CTXM-1

TEM-1,CTXM-1

TEM-1,CTXM-1

TEM-1,CTXM-1

TEM, SHV-12

CTXM-1

TEM-1,CTXM-1

TEM-1

TEM-1, SHV-12

TEM-1,CTXM-15

TEM-1,CTXM-15

CTXM-14

CTXM-14

CTXM-14

CTXM-14

CTXM-14

CTXM-14

CTXM-14

CTXM-14

CTXM-14

TEM-1

TEM-1

TEM-1

TEM-1

TEM-1

cef

control

cef

cef

cef

cef

control

cef

cef

cef

cef

cef

cef

cef

control

control

control

control

control

control

control

control

control

control

cef

cef

cef

cef

amox

cef

cef+amox

cef

cef+control

amox

amox

amox

amox

amox

amox

amox

amox

amox

cef

cef

cef

cef

cef

Id phylo R genes treatmt Caz Am Cs Su Tm Cm Km Ctx Ci Nal Gm Sm Tc Ff

Page 7: Sponsor Day on animal feeding: Antimicrobial consumption and emergence of cephalosporin resistant Escherichia coli and Salmonella in pigs

CONCLUSIONS

Both treatments generated an increase in the proportions of CR E. coli, which was statistically significant during the ingestion of the antimicrobials

The treatment with ceftiofur and amoxicillin was associated to the emergence of CR E. coli, however did not pose enough selective pressure to select for long-term resistant organisms

Both treatments have selected for a wide range of cephalosporin resistance genes: CTX-M-1, CTX-M-9, CTX-M-14, CTX-M-15 and SHV12

CR E. coli were phenotypically resistant to different families of antimicrobials. Half of them were resistant to ciprofloxacin, even though fluoroquinolones were never used to treat these animals

Page 8: Sponsor Day on animal feeding: Antimicrobial consumption and emergence of cephalosporin resistant Escherichia coli and Salmonella in pigs

ceftiof

ur

tulat

hrom

ycin

40

40

30

30

Visit 07 day-old

piglets

Visit 148hr post-

treat

Visit 27 days

post-treat

Visit 3slaughter

SalmonellaCR Salmonella

CR E. coliEnumeration

Isolation

STUDY DESIGN

Page 9: Sponsor Day on animal feeding: Antimicrobial consumption and emergence of cephalosporin resistant Escherichia coli and Salmonella in pigs

Farm TreatmentSows

Day 0 prior

treatment

48hr post

treatment

7 days post treatment Departure to

abattoir

Positive Control Treated Control Treated Control Treated Control Treated

1*Tulathromyci

n5/6 16.7% 77.5% 30% 65% 30% 82.1% 0 0

2 Ceftiofur 7/7 93.3% 92.5% 96.7% 100% 100% 100% 14.3% 63.3%

3Tulathromyci

n0/7 0 0 0 0 0 0 0 0

4 Ceftiofur 6/7 82.8% 71.8% 86.2% 79.5% 89.7% 87.2% 0 0

5 Ceftiofur 0/7 0 0 0 0 0 0 0 0

6Tulathromyci

n5/7 73.3% 87.5% 100% 100% 90% 85% 20.8% 23.5%

7Tulathromyci

n6/7 86.7% 57.5% 76.7% 77.5% 86.7% 75% 50% 47%

8 Ceftiofur 0/7 0 0 0 0 0 0

CR E. coli RESULTSP=0.001

Page 10: Sponsor Day on animal feeding: Antimicrobial consumption and emergence of cephalosporin resistant Escherichia coli and Salmonella in pigs

CR E. coli were found before any treatment, the frequency was variable between farms, and the origin of the grandmothers was associated to the presence of CR E. coli

The occurrence of CR E. coli increased before weaning and decreased with the age of the animals

There were not significant differences in the proportions of animals excreting CR E. coli neither between the two different treatments, nor between the control and the treated groups

Only in one farm, at finishing time the proportion of animals shedding CR E. coli in the group treated with ceftiofur was significantly higher than in the control group

These results suggest that control measures to reduce the prevalence of CR E. coli should be applied in a case by case situation

CONCLUSIONS

Page 11: Sponsor Day on animal feeding: Antimicrobial consumption and emergence of cephalosporin resistant Escherichia coli and Salmonella in pigs

Results CR Salmonella (on going)

66 Salmonella enterica from 5 different farms

4 CR Salmonella containing blaCTX-M-1 and blaCTX-M-14 (all from the same farm) before treatment with ceftiofur

Serotype Nº %Salmonella Rissen 39 59Salmonella Typhimurium monophasic

9 14

Salmonella Panama 7 11Salmonella Brandenburg 7 11Salmonella Anatum 3 5Salmonella Derby 1 2Total 66 100

Page 12: Sponsor Day on animal feeding: Antimicrobial consumption and emergence of cephalosporin resistant Escherichia coli and Salmonella in pigs

SALMONELLA RESULTSDice (Opt:2.00%) (Tol 2.0%-2.0%) (H>0.0% S>0.0%) [0.0%-100.0%]

10

0

80

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E3G3V4C19

E3G3V2C57

E3G3V4C17

E3G2V4C25

E3G2V4C63

E3G3V4C16

E3G3V4C46

E3G3V4C48

E3G3V1C1

E3G3V1C35

E3G3V2C1

E3G3V1C67

E3G2V1C5

E3G2V1C7R

E3G2V1C10

E3G2V1C41

E3G2V1C42

E3G2V1C45

E3G2V1C48

E3G2V1C50R

E3G2V1C53

E3G2V1C54

E3G2V1C55

E3G1V1C51

E3G1V1C62

E3G1V2C61

E3G1V2C67

E3G1V2C70

E3G1V3C62

E3G1V3C67

E3G1V3C70

E3G6V4C23

E3G5V4C6

E3G5V4C41

E3G5V4C44

E3G5V4C48

E3G5V4C63

E3G2V1C19

E3G2V1C33

E3G2V1C34R

E3G2V1C30

E3G2V1C46

E3G2V1C49

E3G2V2C30

E3G2V2C34

E3G2V1C404.

E3G2V2C22

E3G1V4C48

E3G1V4C19

E3G2V1C56

E3G2V1C57

E3G2V1C60

E3G2V2C7

E3G2V2C8

E3G2V2C41

E3G2V2C45

E3G2V2C48

E3G2V2C50R

E3G2V3C10

E3G2V3C50

E3G1V4C36

E3G1V4C42

E3G3V1C591.

E3G3V2C59

E3G3V2C63

E3G6V4C13

S.Tiphymurium mo.

S.Tiphymurium mo.

S.Tiphymurium mo.

S.Tiphymurium mo.

S.Tiphymurium mo.

S.Panama

S.Panama

S.Panama

S.Panama

S.Panama

S.Panama

S.Panama

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Anatum

S.Anatum

S.Anatum

S.Brandenburg

S.Brandenburg

S.Brandenburg

S.Brandenburg

S.Brandenburg

S.Brandenburg

S.Brandenburg

S.Derby

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Rissen

S.Tiphymurium mo.

S.Tiphymurium mo.

S.Tiphymurium mo.

S.Tiphymurium mo.

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CTXM-14

CTXM-1

CTXM-1

CTXM-1

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Page 13: Sponsor Day on animal feeding: Antimicrobial consumption and emergence of cephalosporin resistant Escherichia coli and Salmonella in pigs

CONCLUSIONS

It was not observed any increase in the percentage of samples positive for CR Salmonella during treatment with ceftiofur

This preliminary study suggests that it is not necessary to implement additional control measures focused on reducing the load of CR Salmonella of pig origin

Page 14: Sponsor Day on animal feeding: Antimicrobial consumption and emergence of cephalosporin resistant Escherichia coli and Salmonella in pigs

Edifici CReSA. Campus UAB. 08193 Bellaterra (Barcelona) Spain.Tel. (+34) 93 581 32 84 Fax. (+34) 93 581 44 90e-mail: [email protected] - www.cresa.cat

Acknowledgments :

Project AGL2011-28836 (MINECO)

Farm companies

Karla Cameron-Veas

Lorenzo Fraile Miguel Angel Moreno