some notes and recommendations for a succesful meeting
TRANSCRIPT
SOME NOTES AND RECOMMENDATIONS FOR A SUCCESFUL MEETING
BROADCASTING OF OPENING CEREMONY
http://tv.usc.es/directo2.html
236 participants
ISGA XII FIGURES: PARTICIPANTS
EUROPE105
SOUTH AMERICA46
NORTH AMERICA
20
ASIA46
AFRICA4
AUSTRALIA10
ISGA XII FIGURES: CONTINENTS
ISGA XII FIGURES: 38 COUNTRIES
Spain43
Chile24
Brazil18
China16
Japan14
Norway14
USA14
Australia10
UK10
France6
Greece6
The Netherlands6
Singapore5
Hungary4
Canada3
Mexico3
Philippines3
Finland3
Other 29 from 20 countries
29
Private Company15 Re-
search Center
76
Uni-versity
140
ISGA XII FIGURES: INSTITUTIONS
Breeding programs78
Genomes and Genetic Architecture
46
Functional Genomics
41
Environmental risk21
Biotechnology18
Sex Control17
Genomic Select MAS10
ISGA XII FIGURES: RESEARCH AREAS
Fish169
Mollusc33
General Aqua-
culture24
Crustacean5
ISGA XII FIGURES: TAXONOMIC GROUPS
Other 35 species
46
Atlantic salmon
32
General Aquaculture
25Oyster
15Tilapia
15
Turbot12
Asian sea bass 9
Gilthead seabream
9
Rainbow trout9
Other flatfish8
Catfish7
Clam7
Sturgeon7
European sea bass
6
Mussel6
Abalone4
Amberjack4
Carp4
Coho salmon4
Shrimp4
ISGA XII FIGURES: 54 SPECIES
Oral presenta-tions
87
Poster presenta-tions131
ISGA XII FIGURES: PRESENTATION TYPE
PERSONAL FOR ASSISTANCE
Diego Robledo Xoana Taboada
ORAL PRESENTATIONS
María PérezMónica Otero
GENERAL INFORMATION
INSTRUCTIONS AND RECOMMENDATIONS
20 min City center
South Campus
LAW FACULTY
INSTRUCTIONS AND RECOMMENDATIONS
wc
TO LUNCH
COFFE
COFFE
COFFE
MEETING VENUE
LUNCH VENUE
9 MIN
INSTRUCTIONS AND RECOMMENDATIONS
UNIVERSITY OF SANTIAGO
PAULINO MARTÍNEZ
VISIT GENETICS CONGRESS
ISGA EXCURSIONS: VISIT TO STOLT SEA FARM SA
ISGA EXCURSIONS: VISIT TO SANTIAGO
Sign in the list at the registration desk before Wednesday
THE HISTORY OF AQUACULTURE AND
BREEDING PROGRAMS IN SPAIN
Paulino MartínezUniversity of Santiago de Compostela
8th Spain 41 kg/person/year
SEAFOOD PRODUCTION IN SPAIN
19th Spain ~ 300,000 tons
ATLANTIC OCEAN
MEDITERRANEAN SEA
Romans, and especially the upper class, appreciated very much seafood. Since century II BC Romans reared and grew fish and
mollusk in captivity using nurseries like the one shown in this slide from coastal remainders in Tarragona (Spain). Such facilities reflected the wealth of the upper Roman classes
ROMAN SEAFOOD
The first European aquaculture facilities appear in the Middle Age associated to monasteries and abbeys where fish, especially carps and trouts, were reared. The first Spanish fish farm is founded in 1870 in the Monasterio de Piedra (shown in this picture). By that time, the Spanish Government was concerned about the declining of fish populations in rivers, streams and lakes. The initial objectives of this fish farming centre were repopulation with freshwater trout (Salmo trutta), teaching and research of freshwater ecosystems.
THE FIRST FISH FARMS: ABBEYS AND MONASTERIES
Practical fish farm manual in Spanish for employees of public administration working in fresh and salt water. Mr.
Mariano de la Paz Graells. Madrid. 1844.
FIRST STEPS IN FISH FARMING
GALICIAN REGION
S. EAST ATLANTIC REGION
MEDIT. REGION
CONT.REGION
MAIN AQUACULTURE REGIONS IN SPAIN
Cockle Flat oyster
MusselClam
Turbot Sole
Protected and highly productive ecosystems
Sole
Sea bream
Warmer water. Shallow waters enables extensive
culture in Andalucia
Meager
Sea bream
Sea bass
Closed sea, narrow tide range, warm
temperatures in summer
Long and rich hydrographic system
Tª
-
+
Tª salinity- +
The high importance of Galician Aquaculture is related to its high primary production in the Galician Rias (250 g C/ m2 /year) and its long coast (1200 km: ¼ of the Spanish coast, but only
1/10 of the Spanish territytory)
GALICIAN AQUACULTURE
GALICIAN SEAFOOD RICHNESS
Galician seafood richness is recognized from long time ago. In the 18th century settles in Galicia an important canned and brine industry, which expands in the 19th
and 20th centuries with more sophisticated ways of production and technology associated with food conservation
Photo Museo Pontevedra Photo Historia de la Conserva (bluscus.es)
Fisheries/Aquaculture sector represents 10,7 % of the Galician economy Fisheries, mollusk collection and aquaculture produce more than 1.000 mill.
€/year Galician employment associated with sea-production: 25.000 direct
employments
GALICIAN AQUACULTURE
RÍA (ESTUARY) OF VIGO
MAIN GALICIAN AQUACULTURE SPECIES
Mediterranean mussel( Mytilus galloprovincialis)
~250,000 tonnes
Turbot( Scophthalmus maximus)
~10,000 tonnes
AQUACULTURE RESEARCH
MEDITERRANEO
CANARY ISLANDS
WORLD AQUACULTURE ASSISTANCE
• Project in one country
• Project with more than one country
• Project in several countries
FIRST BREEDING PROGRAMS: THE TURBOT
0,70
0,73
0,75
0,78
0,80
0,83
0,85
0,88
0,90
0,93
0,95
0,98
1,00
1 2 3 4 5 6 7 8 9 10 11
E XCL 1
E XCL 2
In 1995 the first microsatellite tool used in the Spanish Aquaculture were developed to support broodstock organization and genealogical tracing in a
family breeding program starting in 1991 in Stolt Sea Farm SA
INSUIÑA S.A.
6
21
29
36
0
8 8
42
19
13
0
18
3
63
7
24
3
27
9
32
15
6
3
52
30
17
12 1213
60
0 00
20
40
60
80
TURBOT BREEDING PROGRAMS.I
In 1999 Insuiña SA (filial of Pescanova SA) begins a masal selection program supported bymolecular markers
MAIN GENOMICS AQUACULTURE PROJECTS
SmaUSC-E420,0Sma-USC2680,9
Sma-USC1(1)14,4Sma-E23115,7
Sma-USC22830,7
Sma-USC1544,8SmaUSC-E1551,1SMAC0951,51/4AC1852,3Sma-USC4253,0Sma-USC13953,5Sma-USC27156,4Sma-USC10457,4SmaSNP20460,3Sma-E27761,5Sma-USC10174,1SMAC0775,0Sma-USC21880,1
Sma-USC1386,9Sma-USC22291,5Sma-USC23392,6SmaSNP1997,6SmaSNP15398,4
LG01
LG01
Sma-USC900,0Sma-USC46(2)9,2Sma-USC166SmaSNP10310,1
SmaSNP911,0Sma-USC18612,2Sma-E22517,9Sma-USC24218,0Sma-USC16122,9Sma-USC21928,6SMAC0129,8SmaSNP14930,5Sma-USC16831,2SmaSNP7132,5SmaSNP13935,5SmaSNP17838,3SmaSNP3040,2Sma-USC8441,0Sma-USC24541,2SmaUSC-E641,8Sma-USC4441,9Sma-USC24944,8Sma-USC18549,0Sma-USC3650,3Sma-USC10951,6Sma-USC18752,5Sma-USC17152,6Sma-USC6455,0Sma-USC4356,7Sma-USC112(3)85,7
LG02LG02
Sma-USC930,0Sma-USC304,1
Sma-E5216,7
Sma-USC1724,5Sma-USC14428,1SMAC1132,6SmaUSC-E3436,8Sma-USC15738,0
Sma-USC17946,6
Sma-E11852,3
Sma-USC20059,3Sma-E7265,9Sma-E27267,2Sma-USC6867,8Smax-0370,0Sma-USC7773,9Sma-USC9876,5
LG03
LG03
Sma-USC470,0
Sma-E283(4)10,0
SmaSNP18119,1Sma-USC100Sma-USC16719,8
Sma-USC10219,9Sma-USC17723,0Sma-USC27728,5SmaSNP7234,8
SmaSNP12243,6Sma-USC748,8Sma-E18053,1SmaUSC-E354,7B12-IGT1458,5Sma-USC20561,9Sma-USC23063,7
LG04
LG04
Sma-USC2700,0
SmaUSC-E30(5)6,4Sma-USC2886,5SmaSNP3111,7Sma-USC25416,5Sma-USC6518,1
Sma1-152INRA35,7Sma-USC24736,1Sma-USC19136,2Sma-USC19845,1Sma-USC1245,3Sma-USC20248,9Sma-USC26551,9Sma-USC8852,6Sma-E25453,6Sma-USC22554,6Sma-USC27855,3Sma-USC1061,4
SmaSNP4691,9
LG05
LG05
SmaSNP290,0
3/3GT4,9Sma-USC1888,8
Sma-USC147(6)19,5Sma-USC10721,6SmaSNP124,1Sma3-12INRA26,0Sma-USC2828,8Sma-USC11037,6SmaUSC-E29Sma-E31540,2
Sma-USC13245,7Sma-USC22746,8
Sma-USC15974,3
SMAC0486,6Sma-USC264(7)87,27/1TC1890,1
LG06
LG06
Sma-USC1780,0Sma-USC2384,2Sma-USC2065,7SmaSNP627,2Sma-USC15411,5Sma-USC22413,8Sma-E10014,1SmaSNP9417,2B11-I12/6/319,2Sma-USC135(8)25,0Sma-USC27227,1Sma-USC17430,4Sma-USC3731,6Sma-E7833,7Sma4-14INRA38,4Sma-E8441,1Sma-E19443,5
LG07
LG07
Sma-USC590,0Sma-USC1943,7
Sma-E21810,1SMAC0812,6SmaUSC-E4314,3
SmaSNP14725,6Sma-USC269Sma-USC17029,4
Sma-USC1839,6Sma-E30541,1Sma-E97Sma-USC4842,1
Sma-USC20847,5SmaUSC-E447,8
LG08
LG08
Sma-USC2160,0Sma-USC150(9)2,7Sma-USC1188,6SmaUSC-E169,4Sma-E9912,2SmaSNP10019,5SmaUSC-E3621,2Sma-USC12626,9SmaUSC-E2329,3Sma-E7131,8SmaSNP3532,4Sma-E19735,8Sma-E13937,6SmaUSC-E5Sma-E30238,1
F12-ITG1638,4SmaUSC-E4140,1SmaSNP10645,8SmaSNP5846,3Sma-USC5748,9Sma-E24849,6SmaUSC-E250,2Sma-USC2152,3Sma-E11758,6SMAC0563,54/5CA22/6/266,1Sma-USC22670,3
LG09LG09
Sma-USC175(10)0,0Sma-USC2790,8
Sma-USC21710,1SmaUSC-E2011,8
SmaUSC-E2726,5SmaUSC-E3232,2Sma-USC16235,1Sma-USC1141,2Sma-USC2642,6SmaSNP15743,4Sma-USC163Sma-USC24443,5
Sma-USC11344,7Sma-E22048,1Sma-USC9661,2Sma-USC53Sma-E14461,5
Sma-E29062,1Sma-E22462,2Sma-USC7962,3SmaSNP3(11)64,4Sma-USC28167,3
LG10
LG10
SmaSNP520,0Sma-USC2584,3Sma-USC201(12)Sma-USC1527,0
SmaSNP6913,2SmaSNP3423,3Sma-E28424,4Sma-USC15828,8SmaUSC-E2434,8Sma-USC6236,9Sma-USC839,2Sma-USC16540,3Sma-E9641,5Sma3-10INRA42,4Sma-USC2243,0Sma-E15646,0Sma-USC23550,7Sma-USC27551,7Sma-USC11652,6
LG11
LG11
Sma-USC600,0SmaSNP1402,1Sma-USC354,93/9CA156,4Sma-USC1847,14/4CA4/138,1Sma-USC183(13)8,2SmaSNP1139,5Sma-USC8915,2Sma-USC2020,3SmaUSC-E1424,2Sma-USC1924,7Sma-USC13325,5Sma-USC5626,8SmaSNP7327,2SmaUSC-E2128,1Sma-USC14330,1SmaUSC-E2231,6Sma-E31031,9SmaSNP12632,2
Sma-USC26660,3
LG12LG12
Sma-USC2800,0Sma1-125INRA2,8Sma-E8212,4Sma-USC913,1Sma-USC26714,5Sma-USC12521,5Sma-USC9423,6Sma-USC3423,7Sma-USC20323,8Sma-USC21523,9Sma-USC7625,0SmaSNP15025,4Sma-USC1632,0Sma-USC11534,9
Sma-E12047,2Sma-E215SmaUSC-E1049,5
SmaUSC-E3858,9TUR0361,3Sma-E7465,9Sma-USC155(14)66,5SmaSNP4467,8
SmaSNP19277,7
LG13
LG13
Sma-USC1460,0Sma-USC332,2SmaUSC-E284,0Sma-USC856,5Sma-USC2208,8
Sma-USC8225,1Sma-USC8126,4SmaUSC-E18(15)31,8Sma-USC63(16)32,1Sma-USC21338,4Sma-USC2541,0Sma-USC7445,4
Sma-USC25355,7
Sma-E16460,7
LG14
LG14
Sma-USC780,0Sma-E610,9SmaUSC-E81,6Sma-E2614,5Sma-E2765,2Sma-USC214(17)8,8Sma-E8610,2Sma-USC4516,7Sma-USC425,9Sma-USC3228,2Sma-USC21131,2Sma-E28939,2Sma-USC11143,9Smax-0145,7Sma-USC10350,2SmaSNP18850,4Sma-USC28750,9Sma-USC14951,9Sma-USC22152,1Sma-USC23252,4
LG15LG15
Sma-E1870,0Sma-E1371,3Sma-USC2073,7Sma-E1589,0
Sma-USC17220,6Sma-USC19520,9SmaUSC-E11(18)21,3Sma-USC12823,7Sma-USC25031,8Sma-USC25632,3Sma-USC13641,03/20CA1743,5Sma-USC28245,9Sma-USC28547,3Sma-USC22354,1Sma-USC5055,6Sma-E18357,2
Sma3-8INRA(19)66,5
LG16
LG16
SMAC060,0Sma-USC915,4Sma-E1126,7
Smax-0212,8Sma-USC31Sma-USC13818,3
Sma-USC5525,6Sma-USC5227,8
Sma-E15933,5
Sma3-129INRA46,3Sma-USC13447,3Sma-USC14249,4SmaUSC-E1Sma-E18455,8
SmaUSC-E1267,1
LG17
LG17
Sma-USC1930,0Sma-E2279,3SmaUSC-E40(20)11,1SmaUSC-E13Sma-E19512,2
Sma-USC16013,3Sma-USC13716,0
SmaUSC-E1925,9
LG18
LG18
3/20CA170,0Sma-E1426,8Sma-USC10810,6Sma-E20514,0F1-OCA1918,6Sma-E10519,42/5TG14(21)20,7Sma-USC2422,7Sma-USC12923,4Sma-USC8624,2Sma-USC26325,4Smax-04b33,6Sma-USC2338,1
LG19
LG19Sma-USC176(22)0,0SmaSNP1941,6Sma-USC295,1Sma-E255(23)10,2
Sma-E12817,1Sma-E18917,8Sma-E24419,9
Sma-E27030,1Sma-USC9230,6Sma-USC28435,6
LG20
LG20SmaSNP2100,0Sma-USC412,6Sma-USC873,0Sma-USC759,6Sma-USC14810,9Sma-USC11713,3Sma-USC23118,1Sma-USC23420,7Sma-E31624,2
LG21
LG21Sma-E1670,0SmaSNP2021,6Sma-USC14(24)2,6Sma-USC97Sma-USC2414,3
Sma-USC805,5Sma-USC405,8Sma-USC1235,9Sma5-111INRA8,6SmaUSC-E399,0
Sma-USC58(25)25,5
SmaSNP16038,9
LG22LG22Sma-USC1640,0Sma-E1680,4
Sma-USC27311,2Sma-USC212,8
Sma-USC38(26)20,1Sma-USC5421,9SmaSNP6827,9Sma-E12728,9Sma-E15432,9
SmaUSC-E3346,9SmaUSC-E3149,8
Sma-USC25260,7
LG23
LG23Sma-USC2100,0F8-I11/8/172,7Sma-USC2296,7
LG24
LG24
THE TURBOT GENETIC MAP
Bouza et al (Genetics, 2007)
QTLs resistance AS (BMC Genomics, 2011)
QTL sex (Genetics, 2009)
QTLs resistance PD (Animal Genetics, 2012)
QTLs growth (BMC Genomics, 2010)
GENOMIC ARCHITECTURE OF PRODUCTIVE TRAITS
FLATFISH ESTs DATABASES: SOLEAMOLD & TURBOTBASE
Cerdá et al., BMC Genomics (2008)Pardo et al., BMC Vet Res (2008)
Systematic annotation
GO termsKEGG pathways
Homology search
BLAST homology
E- valueScore
Alignment
Sequence data
Clustering
Group code SequencesAlignmentConsensus
sequences
Quality assessment
Cleaning and edition
Clustering
Raw sequence, code, quality, edition
Contigs and singletons
Sequences: Sanger/NGS
FUNCTIONAL GENOMICS: EST DATABASES AND MICROARRAYS DEVELOPMENT
WHOLE GENOME SEQUENCING
Figueras et al. (in preparation)Chen and Shao (poster presentation)
Manchado et al. (draft genome)
NEW BREEDING PROGRAMS: FISH
NEW BREEDING PROGRAMS: MOLLUSK
Flat oyster (Ostrea edulis)Resistance to bonamia
Mussel (Mytilus galloprovincialis)
Toxin accumulation
