protein identification and localization of afadin, nectin
TRANSCRIPT
The Role of the Nectin-Afadin Cell Adhesion Complex in
Migrating Parietal Endoderm
Caroline Kuzoian and Anurag Ojha
Cell Migration is found in:◦ Wound healing◦ Embryonic Development◦ Cancer (metastasis)
PE (Parietal Endoderm) and F9 cells were used in the experiment
PE cells are made from F9 cells The interaction with each other helps the cells
migrate properly to form the yolk sac surrounding the embryo
Cell Migration
To determine the presence and function of the Nectin-Afadin complex.
Objective
Model System
Afadin – intracellular component of nectin-afadin complex, binding to the cytoskeleton
Nectin – extracellular component of the nectin-afadin complex, creates homophilic bonds
Partitioning Defective 3 (Par-3) – binds to nectin and recruits afadin to create the nectin-afadin complex
Actin – is a major component of the cytoskeleton and is involved in cell-to-cell interactions.
Proteins of Interest
Par-3 binds to nectin, nectin binds to afadin, which binds to actin◦ This causes actin to reorganize and recruit inactive E-
Cadherins to the binding site.
Nectin-Afadin Complex
Cell One
Cell Two
Primary Secondary
◦ Tags Horseradish Peroxidase – Western blotting Alexa fluor – immunofluorescence
Antibodies
A process to determine presence of specific proteins within a cell lysate.◦ Used to compare presence of the same proteins
within different cell types Identification of proteins by molecular
weight
Western Blotting
•Lyse=burst• Isolate proteinsCell Lysis
•Find unknown protein concentration
Bradford Assay
•Run current through gel
•Separate proteins by size
Loading Gel
•Run current•Proteins pulled onto membrane
Semi-Dry Blotting
• Incubate overnight
•WashPrimary Antibody
• Incubate one hour
•Wash
Secondary
Antibody
•Substrate produces color
OPTI-4CN Stain
WB:ProcessProtein
Western Blots
Protein Molecular Weight (kDa)
Nectin 87
Afadin 200
Par-3 180, 150, 100
Actin 42
Si Treatment Afadin 7/17
Si Treatment Actin 7/17
Control Lipofectamine Si Scramble Actin Par-3 Control
Control Lipofectamine Si Scramble Actin Par-3 Control
Add biotin to the cells when they are whole Labels proteins on cell surface
Bradford Assay- Protein Concentrations Antibodies over night to isolate desired protein Run Gel Transfer to membrane Streptavidin: Binds to biotin to show whether the protein
was cell surface bound Used OPTI4CN to develop a blot Biotin can be directly searched for
Immunoprecipitation
Immunofluorescence
Immunofluorescence
A technique used to decrease the translation of a targeted protein. ◦ Results in double stranded mRNA which cannot be
translated completely.
siRNA Mediated Knockdown
Immunofluorescence staining of siRNA treated cells to determine functional changes of the nectin-afadin complex
Western blotting to determine changes of levels in par3 and nectin after siRNA treatment
Future Directions
Kathy Martin Jim Mulrooney Theo Szurlo David Artus Nate Aponte Alex Pokorski
Acknowledgements
Kudra, Randy, 2011, The Role of Cell to Cell Adhesions in Parietal Endoderm Migration, Central Connecticut State University, 1-34.
Science Direct. 2012 Elsevier B.V., 22 Sept. 2003. Web. 19 July 2012. <http://www.sciencedirect.com/science/article/pii/S0959438803001247>.
The University of Queensland. 2012 The University of Queensland, n.d. Web. 20 July 2012.
References