liquid biopsies - uclmontgodinne.be · 5 why? comparison to gold standard : tumor biopsy o...

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1 o Peter Vuylsteke o Oncologie médicale o CHU UCL Namur , Ste-Elisabeth Liquid Biopsies

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Page 1: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

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o Peter Vuylsteke o Oncologie médicale o CHU UCL Namur , Ste-Elisabeth

Liquid Biopsies

Page 2: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

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o What

o Why

o When and How

Outline

Page 3: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

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What?

Page 4: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

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What?

o ctDNA (short DNA fragments of dying cancer cells)

o Circulating microRNA

o CTC (xenografts)

o Microvesicles

o Proteins and metabolites,…

…(can be found in any body-fluid)

Page 5: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

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Why?

Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid »

o Sometimes no tumor…

o Repeat biopsy : « please don’t do it again, doc »

o Heterogeneinity

o Processing time

o Paraffin blocs (if retrospective),...

Page 6: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

cfDNA • Used routinely in pregnancy: detect fetal DNA

• Cancer: ctDNA: not as « easy » as fetal DNA

Page 7: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

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When and How

o Screening: Detect cancer « earlier »

o Post-treatment: residual ?disease recurrence ?

o Advanced disease: treatment selection and monitoring

o Refractory disease: mechanism of resistance

Page 8: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

1/Screening Detect tumor before the tumor is « visible »

• Conclusion;: « These data suggest circulating miRNAs have potential to develop a non-invasive diagnostic test for ovarian cancer »

Page 9: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

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Benign disease

Borderline tumors

non-HGSOC invasive carcinomas

HGSOC invasive carcinomas

Stable genome (2n)

Unstable genome

Vanderstichele et al. Clin Cancer Res 2017

Masse adnexielle: Bénin ou non? cfDNA: Copy Number Variation

Page 10: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

cfDNA RMI CA-125

high specificity:cfDNA is 2-5 times higher

2x

5x

Useful for presurgical characterization

Benign versus HGSOC

Vanderstichele et al. Clin Cancer Res 2017

Page 11: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

cfDNA always specific? «normal» cells can also shed mutated cfDNA

• Why? • Clonal Mosaicism.. • Aging (WBC)

• Eg SCLC: tp 53 mutation

Page 12: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

cfDNA screening in general population for cancers

without a specific mutation = not mature

– Whom to screen then? Patients at risk:

Page 13: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

2/Detect residual disease and screening for recurrence

• Sequence the tumor first! Personalised ctDNA assay looking for the mutations found in tumor.

Page 14: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

prognostic

Colorectal cancer st II

Pancreatic cancer Breast cancer

CEA Tumor marker

ctDNA

ctDNA ctDNA

Sausen M et al.

Nat Commun 2015

Garcia-Murillas I et

al.

Sci Transl Med 2015

Tie et al.

Sci Transl Med 2016

Page 15: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

Can you do something about it? Trials needed:

• Colon Ca st II: adj chemotherapy helps?

• cTRAK TN (UK) – High risk TN breast Ca, post adjuvant setting

• If ctDNA becomes pos in first year – Random : Pembro vs observation

• Treat CTC trial (EORTC)

Page 16: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please
Page 17: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

ctDNA: EARLY marker of Recurrence

Page 18: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

Ovarian

Pereira E et al. Plos One 2015

Lead time for ctDNA

6 months over CA-125

7 months over symptoms

Page 19: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

3/ Relapse

Finetune your Therapy

–Choose best treatment

–Monitor response

Page 20: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

Choose the best treatment upfront

• Trials: ctDNA sequencing in metastatic setting. – Treatment according to mutation(s) found

– Challenges: • All tumors? (only « targetable» tumors?)

• Treatment available ?(off-label? Precision-trial BSMO)

• Better than standard approach? Randomised..?

– AURORA

Page 22: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

Monitor: ctDNA, early marker of response

Parkinson CA et al. Plos Medicine 2016

Ovarian cancer: >60% decrease in ctDNA (p53)

after 1 cycle chemo

= predictor of longer time-to-progression

(D CA125 was no significant predictor)

USEFUL in the CLINIC? We treat if there is response, even if minimal response…

Page 23: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

4/Resistance • Often a sign of subclonal development.

Page 24: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

Resistance: ctDNA clinical use (FDA)

• Lung Cancer with EGFR mutation

– Gefitinib/ Erlotinib: EGFR TKI

– Monitor cfDNA for EGFR T790: start Osimertinib

• Breast cancer?

Page 25: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

TR

• Breast

• Ovarian: Resistance to PARP-inhibitors ?

Page 26: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

Norquist et al. JCO 2011

45 recurrent BRCA-mutated relapsed ovarian cancers

13/45 (29%) had secondary rev mutation

12/13 (92%) were platinum-resistant at recurrence

BRCA reversion mutations: platinum/PARP-Inh resistance

Page 27: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

Clinically usefull

• Whether to Start/Stop Parp-Inhibitor

• At 5000 euro/mth of treatment cost

– A 500 euro ctDNA monitoring may be worth it.

• Etude CLIO

Page 28: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

Conclusion

• Liquid biopsies: part of our TR research tools

• They are getting faster…and cheaper…

• They will help us to help our patients better: find the right treatment, for the right tumor, at the right moment.

Page 29: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please

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THANK YOU

Page 30: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please
Page 31: Liquid Biopsies - uclmontgodinne.be · 5 Why? Comparison to gold standard : Tumor biopsy o Accessibility >< « liquid » o Sometimes no tumor… o Repeat biopsy : « please