hpp – shotgun status

Download HPP –  Shotgun  Status

Post on 22-Feb-2016

21 views

Category:

Documents

0 download

Embed Size (px)

DESCRIPTION

A.M. 30/11/2012. HPP – Shotgun Status. Project 22/8. FDR 1%: Protein level. Peptides & proteins by labs. Proteins by experiment. Exclusive Proteins ( including secretome ). Chr16 - distribution. Prot : 537 Genes: 385. Exclusive proteins Chr16. - PowerPoint PPT Presentation

TRANSCRIPT

HPP Shotgun Status

HPP Shotgun StatusA.M.30/11/2012Project 22/8

22 experimentos en 8 laboratorios2FDR 1%: Protein level

Peptides & proteins by labs

Proteins by experiment

Nmero de protenas identificadas en cada experimento5Exclusive Proteins (including secretome)

Protenas nicas identificadas en cada experimento6Chr16 - distribution

Prot: 537Genes: 385Exclusive proteins Chr16

Protenas nicas del cromosoma 16 identificadas en cada experimento8 FDR 1% at peptide level from 24 experiments

FDR 1% at peptide level from 24 experiments

Exclusive Proteins

Exclusive Proteins of chromosome 16

Protein increase with experiment number

Quantitative information?Q = # peptides/kDaOnly for chromosome 16 proteinsQuantitative information?5 Less abundant proteins of chromosome 16CHD9_HUMAN Chromodomain-helicase-DNA-binding proteinCBP_HUMAN CREB-binding proteinIsoform 3 of Dynein heavy chain 3, axonemalRBBP6_HUMAN Isoform 3 of E3 ubiquitin-protein ligase RBBP6ZN646_HUMAN Zinc finger protein 646

5 Most abundant proteins of chromosome 16RS2_HUMAN 40S ribosomal protein S2RS15A_HUMAN 40S ribosomal protein S15aCOTL1_HUMAN Coactosin-like proteinELOB_HUMAN Transcription elongation factor B polypeptide 2ALDOA_HUMAN Fructose-bisphosphate aldolase A