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Byron Yu Assistant Professor Electrical & Computer Engineering and Biomedical Engineering Brain-machine interfaces

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Page 1: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Byron Yu

Assistant Professor

Electrical & Computer Engineering and Biomedical Engineering

Brain-machine interfaces

Page 2: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Introduction •  Problem: Hundreds of thousands are unable to move or communicate due to injury/disease.

•  Potential solution: Neural prostheses translate cortical signals into control signals.

Injury & Disease

Spinal cord injuries (~200K in US; 40K quadriplegic)

ALS / Lou Gehrig’s (~30K in US)

Visual Motor

Control signals (to muscle stims, prosthetic arm, computer cursors, etc.)

Neural signals

Estimation

Page 3: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Brain-machine interfaces

Cyberkinetics, Inc.

Page 4: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Cochlear implants

Sensory input

Motor output

Prosthesis

Advanced Bionics Corp.

•  Provides sense of hearing by stimulating auditory nerves

•  ~150,000 patients worldwide have received cochlear implants

Page 5: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Deep brain stimulation (DBS)

Sensory input

Motor output

Prosthesis

•  Alleviates symptoms of Parkinson’s disease by stimulating basal ganglia

•  >55,000 patients worldwide have received DBS therapy

Brain processing

Medtronic, Inc.

Page 6: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Motor prosthetics

Sensory input

Motor output

Prosthesis

•  Allows paralyzed patients to control prosthetic limbs, computer icons

•  In US, ~150k with spinal cord injuries, ~120k quadriplegic, ~30k with ALS / Lou Gehrig’s

Cyberkinetics, Inc.

Page 7: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Brain-machine interfaces

Hochberg et al., Nature, 2006.

Patient’s workspace

Email TV

Lights

Heater

Music

Wheel chair

Food Window

Page 8: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Two different control strategies

Discrete: decode reach goal location

Continuous: decode moment-by-moment arm trajectory

Page 9: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

High-speed key selection device

1 2 3 4 5 6 7 8

Target onset

Santhanam, Ryu, Yu, Afshar, Shenoy. Nature, 2006.

6.5 bits / sec, equivalent to typing ~15 words / min

Page 10: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Two different control strategies

Discrete: decode reach goal location

Continuous: decode moment-by-moment arm trajectory

Page 11: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Controlling a robotic arm

Velliste et al., Nature, 2008.

Page 12: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

FDA-approved human trials

Hochberg et al., Nature, 2006.

Page 13: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense
Page 14: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Trajectory model

Dynamical model

Linear Gaussian model:

Page 15: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Touch hold Delay period Go cue Reach

hand speed

Trial G20040123.430

Page 16: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Touch hold Delay period Go cue Reach

hand speed

Trial G20040123.430

1 2 0 0 1 0 3 1 0 0 1 0 0 2 3 1 0 1 0

Spike count vector

Page 17: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Touch hold Delay period Go cue Reach

hand speed

Trial G20040123.430

1 2 0 0 1 0 3 1 0 0 1 0 0 2 3 1 0 1 0

Spike count vector

0 1 1 0 0 0 1 2 2 1 0 1 0 3 1 0 2 0 0

Page 18: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Touch hold Delay period Go cue Reach

hand speed

Trial G20040123.430

1 2 0 0 1 0 3 1 0 0 1 0 0 2 3 1 0 1 0

Spike count vector

0 1 1 0 0 0 1 2 2 1 0 1 0 3 1 0 2 0 0

2 0 0 0 1 1 0 2 0 0 1 1 2 1 2 1 1 0 1

Page 19: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Dynamical model

Observation model

Trajectory model

Page 20: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Kalman Filter

Using the trajectory model and observation model, we compute at each timepoint:

Arm state estimate

Confidence region

Page 21: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Kalman Filter

Page 22: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Gilja, Nuyujukian, Chestek, Cunningham, Yu, Ryu, Shenoy

Closed-loop cursor control using Kalman filter

Page 23: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Cursor control along instructed paths

Sadtler, Ryu, Yu, Batista, IEEE Neural Engineering, 2011.

Page 24: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Road ahead There is still much work to be done to get decoded movements to rival natural movements.

Monkey  hand-­‐controlling  a  virtual  cursor  

Credit: Churchland, Kaufman, Shenoy

Page 25: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Monkey  hand-­‐controlling  a  virtual  cursor  

Monkey  brain-­‐controlling  a  virtual  cursor  

Credit: Churchland, Kaufman, Shenoy Credit: Gilja, Nuyujukian, Chestek, Cunningham, Yu, Ryu, Shenoy

Road ahead There is still much work to be done to get decoded movements to rival natural movements.

Page 26: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

Clinical progress & challenges ahead

Hochberg et al., Nature 2006.

Challenges:

• Increase decoding performance (algorithms)

•  Minimize surgical invasiveness

•  Increase electrode lifetime

•  Increase electrode recording stability (adaptive algorithms)

•  Fully implantable, low-power electronics

•  Replace connector/wires with telemetry

•  Increase capabilities of prosthetic devices

Clinical trials:

•  Braingate (Brown, MGH, Stanford)

•  University of Pittsburgh

Page 27: Byron Yu - compneurosci.comcompneurosci.com/wiki/images/8/87/20120815_cosmo.pdf · Cochlear implants Sensory input Motor output Prosthesis Advanced Bionics Corp. • Provides sense

See “Kalman Filter” notes