building your own 2-photon microscope: challenges...

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Roberto Weigert, Ph.D. Chief, Intracellular Membrane Trafficking Section Oral and Pharyngeal Cancer Branch NIDCR-NIH Building Your Own 2-Photon Microscope: Challenges, Advantages and Limitations

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Page 1: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

Roberto Weigert, Ph.D. Chief, Intracellular Membrane Trafficking Section Oral and Pharyngeal Cancer Branch NIDCR-NIH

Building Your Own 2-Photon Microscope: Challenges, Advantages and Limitations

Page 2: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

Building Your Own 2-Photon Microscope:! Challenges, Advantages and Limitations!

How did we manage to build a 2-photon microscope?!

Caffeine (Strictly Italian Espresso) !12% Ethanol (Preferably Italian) !

Being a pain in the neck……………….!

put together!

Page 3: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

Building Your Own 2-Photon Microscope! !

Why? !Turn Key System! Build your own!

1)  Budget!1)  Low-Start up package!2)  Maintenance!

2)  Flexibility!3)  Upgrades!

More expensive!$400K-500K!

!$150K Laser!

First step (first major decision)!

Buy Confocal microscope! Convert to a 2-photon!

Which Platform?!

Olympus!1) We copied the system built here!2) Flexibility!3) Support!

$150K !

Thorlabs!Labvision!

Page 4: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

Flexibility:!!

!1) 2-photon!!2) Confocal!!!

!Motion artifacts!

Upright vs. Inverted!

All the organs!Upright!

All the organs but the brain!Live Cell Imaging!

Inverted!

“Custom made holding device specifically designed for the organ of interest”!

“Positioning and securing the organ to the coverslip”!

1)  Intravital imaging!2)  Live Cell imaging!

1)  All the organs!

w/o holding device! with holding device!

Page 5: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

All the organs!

All the organs but the brain!Live Cell Imaging!

Upright!

Inverted!

Inverted converted to upright!

Upright vs. Inverted!

Page 6: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

Excitation beam (IR)!

Emitted light (visible)!

1)  Optimized for visible light!2)  Increase the light path!

1)  Model available with PMT on top!3)  Loss of power (5-10%)!4)  No effects on laser pulse width!5)  Requires extra stage!6)  Head can be rotated!7)  Adaptors for lenses !

Upright vs. Inverted!

Page 7: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

All the organs!Upright!

Upright converted to inverted!

Upright vs. Inverted!

Page 8: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

1)  Microscope

Scanning unit

Microscope UV laser 405 nm

Laser combiner

488 nm 561 nm 633 nm

High power lasers (3-4 W)

Pulses: 100-150 fs

Repetition rates: 80-100 Hz

Tunable: 680-1080 nm

“Laser”

Ti-sapphire lasers Tunable vs. single wavelength

Beam diameter: 1.2 +/- 0.2 mm

Laser

Page 9: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

2) Laser!

High power lasers (3-4 W)!

Ti-sapphire lasers!

1)  Microscope!

Scanning unit!

Microscope!UV laser 405 nm!

Laser combiner!488 nm,561 nm,633 nm!

Laser output power!

Page 10: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

2) Laser!

High power lasers (3-4 W)!

Ti-sapphire lasers!

1)  Microscope!

Scanning unit!

Microscope!UV laser 405 nm!

Laser combiner!488 nm,561 nm,633 nm!

Beam expander! Dichroic mirrors!

(A) 800 nm – 3520 mW (100%)!

(A) !

3280 mW (93%)!(B) !

(B) !

864 mW (25%) !(C) !

(C) !

(D) ! 340 mW (10%) – 60x N.A 1.2!

(D) !

Loss of power throughout the optics!

Page 11: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

2) Laser!

High power lasers (3-4 W)!

Ti-sapphire lasers!

1)  Microscope!

Scanning unit!

Microscope!UV laser 405 nm!

Laser combiner!

488 nm,561 nm,633 nm!

Beam expander!3) Control output power!

1) ND filters! a)  Single!b)  Carousel with multiple filters (8-10)!

a)  Manually or software controlled!

2) ND continuous filter wheel!

Control the power at the specimen!

Page 12: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

2) Laser!

High power lasers (3-4 W)!

Ti-sapphire lasers!

1)  Microscope!

Scanning unit!

Microscope!UV laser 405 nm!

Laser combiner!

488 nm,561 nm,633 nm!

Beam expander!3) Control output power!

1) ND filters!

2) ND continuous filter wheel!

3) AOM (Acousto-optic modulator) !

4) EOM (Electro-optic modulator) !

a)  Easy integration with the software!b)  Size of the beam matching the aperture of the AOM!c)  Significant pulse broadening (up to 600 fs)!

a)  Need for a pre-chirping system!d)  Deflection of the beam !

a)  Not practical if different wavelengths are needed!b)  Need for an automatic realignment set up (expensive)!

Control the power at the specimen!

Page 13: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

2) Laser!

Ti-sapphire lasers!

1)  Microscope!

Scanning unit!

Microscope!UV laser 405 nm!

Laser combiner!488 nm,561 nm,633 nm!

Beam expander!

3) Control output power!

Pulses: 100-150 fs !

4) Autocorrelator!

Broadening of the pulse width!

(b) Measure the pulse and the power at the “specimen” !(b) !(a) Measure the pulse at the “source”!

!

(a) !

(a) !

Page 14: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

2) Laser!

Ti-sapphire lasers!

1)  Microscope!

Scanning unit!

Microscope!UV laser 405 nm!

Laser combiner! 488 nm,561 nm,633 nm!

5) Beam expander!

3) Control output power!

4) Autocorrelator!

1)  Control the size of the beam!

2)  Control the power at the specimen!

Size of the laser beam!

Page 15: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

Filling the back aperture of the lens!

Underfilling!

Filling!

Essential for large lenses such as the 20X !

Control the power at the specimen by overfilling!

Filling the backaperture of the lens!

Page 16: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

2) Laser!

Ti-sapphire lasers!

1)  Microscope!

Scanning unit!

Microscope!UV laser 405 nm!

Laser combiner! 488 nm,561 nm,633 nm!

5) Beam expander!

3) Control output power!

4) Autocorrelator!

Challenge: alignment of the beam!

Page 17: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

2) Laser!

Ti-sapphire lasers!

1)  Microscope!

Scanning unit!

Microscope!UV laser 405 nm!

Laser combiner!488 nm,561 nm,633 nm!

5) Beam expander!

3) Control output power!

4) Autocorrelator!

6) Optics!

6) Excitation Dichroic mirror – reflect above 675-680 nm!

Proper optics!

Page 18: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

2) Laser!

Ti-sapphire lasers!

1)  Microscope!

Scanning unit!

Microscope!

UV laser 405 nm!Laser combiner!488 nm,561 nm,633 nm!

5) Beam expander!

3) Control output power!

4) Autocorrelator!

6) Optics!

A)  Descanned detectors !

B)  Non-descanned detector!

7) Detectors!

Non-descanned detectors!

Positioning!

Page 19: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

PMT-­‐1  

PMT-­‐2   PMT-­‐3  

GaAs  detector  

3 Cooled PMT from Hamamatzu R6060-11

SDM  500  

PMT-­‐1  

SDM  570  

PMT-­‐2  

PMT-­‐3  

DM  590-­‐650  SDM  500  BF  680  BF680

DM  405-­‐560  

SDM  560  

GaAS  

Non-descanned detectors

1 Gallium Arsenide PMT

Page 20: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

Non-descanned detectors

Objective inverter with PMT

Page 21: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

2) Laser

Ti-sapphire lasers

1)  Microscope

Scanning unit

Microscope

UV laser 405 nm Laser combiner 488 nm,561 nm,633 nm

5) Beam expander

3) Control output power

4) Autocorrelator

6) Optics

7) Detectors CCD camera

Confocal microscopy Two-photon microscopy

Page 22: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!
Page 23: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

Confocal!

60x

Oil

N.A

. 1.4!

Confocal!

60 µm!

z  

y  

y  

x  

30 µm!

15 µm!

0 µm!

y  

x  

30 µm!

A! Two-photon!

120 µm!

0 µm!

z  

y  

60 µm!

y  

x  

y  

x  

120 µm!

60 µm!

60x

Wat

er N

.A. 1

.2!

B!

Confocal!

25x

Wat

erN

.A. 1

.05 !

90 µm!

z  

y  

y  

x  

45 µm! 45 µm!

90 µm!

y  

x  

0 µm!Two-photon!

250 µm!

y  

x  

125 µm!

0 µm!

250 µm!

125 µm!

y  

x  

z  

y  

Page 24: Building Your Own 2-Photon Microscope: Challenges ...static.medicine.iupui.edu/obrien/2015Presentations/... · 1) Microscope! Scanning unit! Microscope! UV laser 405 nm! Laser combiner!

Two-photon!

30x

Silic

on o

il N

.A. 1

.05 !

300 µm!

100 µm!

z  

y  

y  

x   300 µm!

50 µm!

150 µm!

0 µm!

150 µm!

100 µm!50 µm!

D!

Con

foca

l!Tw

o-ph

oton!