bo deng university of nebraska-lincoln topics: circuit basics circuit models of neurons ---...

40
Bo Deng University of Nebraska-Lincoln Topics: Circuit Basics Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model --- Our Models Examples of Dynamics --- Bursting Spikes --- Metastability and Plasticity --- Chaos --- Signal Transduction Joint work with undergraduate and graduate students: Suzan Coons, Noah Weis, Adrienne Amador, Tyler Takeshita, Brittney Hinds, and Kaelly Simpson

Upload: hugo-mckenzie

Post on 28-Dec-2015

217 views

Category:

Documents


1 download

TRANSCRIPT

Page 1: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Bo DengUniversity of Nebraska-Lincoln

Topics: Circuit Basics Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model --- Our Models Examples of Dynamics --- Bursting Spikes --- Metastability and Plasticity --- Chaos --- Signal Transduction

Topics: Circuit Basics Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model --- Our Models Examples of Dynamics --- Bursting Spikes --- Metastability and Plasticity --- Chaos --- Signal Transduction

Joint work with undergraduate and graduate students: Suzan Coons, Noah Weis, Adrienne Amador, Tyler Takeshita, Brittney Hinds, and Kaelly Simpson

Page 2: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Circuit Basics

Q = Q(t) denotes the net positive charge at a point of a circuit. I = dQ(t)/dt defines the current through a point. V = V(t) denotes the voltage across the point.

Analysis Convention: When discussing current, we first assign a reference direction for the current I of each device. Then we have: I > 0 implies Q flows in the reference direction. I < 0 implies Q flows opposite the reference direction.

Analysis Convention: When discussing current, we first assign a reference direction for the current I of each device. Then we have: I > 0 implies Q flows in the reference direction. I < 0 implies Q flows opposite the reference direction.

Page 3: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Capacitors

A capacitor is a device that stores energy in an electric potential field.Q

Review of Elementary Components

Page 4: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Inductors

An inductor is a device that stores (kinetic) energy in a magnetic field.dI/dt

2

2

Inductor

dt

QdL

dt

dILV

Page 5: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Resistors

A resistor is an energy converting device. Two Types:

Linear Obeying Ohm’s Law: V=RI, where R is resistance. Equivalently, I=GV with G = 1/R the conductance.

Variable Having the IV – characteristic constrained by an equation g (V, I )=0.

I

V

g (V, I )=0

Page 6: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Kirchhoff’s Voltage Law

The directed sum of electrical potential differences around a circuit loop is 0. To apply this law: 1) Choose the orientation of the loop.2) Sum the voltages to zero (“+” if its current is of the same direction as the orientation and “-” if current is opposite the orientation).

Page 7: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Kirchhoff’s Current Law

The directed sum of the currents flowing into a point is zero. To apply this law: 1) Choose the directions of the current branches.2) Sum the currents to zero (“+” if a current points toward the point and “-” if it points away from the point).

Page 8: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Example By Kirchhoff’s Voltage Law

with Device Relationships

and substitution to get

or

Page 9: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Circuit Models of Neurons

I = F(V)

10 C

Page 10: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Excitable Membranes

Neuroscience: 3ed

• Kandel, E.R., J.H. Schwartz, and T.M. Jessell Principles of Neural Science, 3rd ed., Elsevier, 1991.• Zigmond, M.J., F.E. Bloom, S.C. Landis, J.L. Roberts, and L.R. Squire Fundamental Neuroscience, Academic Press, 1999.

• Kandel, E.R., J.H. Schwartz, and T.M. Jessell Principles of Neural Science, 3rd ed., Elsevier, 1991.• Zigmond, M.J., F.E. Bloom, S.C. Landis, J.L. Roberts, and L.R. Squire Fundamental Neuroscience, Academic Press, 1999.

Page 11: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Kirchhoff’s Current LawKirchhoff’s Current Law - I (t)

Hodgkin-Huxley Model

Page 12: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

-I (t)

Page 13: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

• Morris, C. and H. Lecar, Voltage oscillations in the barnacle giant muscle fiber, Biophysical J., 35(1981), pp.193--213.

• Hindmarsh, J.L. and R.M. Rose, A model of neuronal bursting using three coupled first order differential equations, Proc. R. Soc. Lond. B. 221(1984), pp.87--102.

• Chay, T.R., Y.S. Fan, and Y.S. Lee Bursting, spiking, chaos, fractals, and universality in biological rhythms, Int. J. Bif. & Chaos, 5(1995), pp.595--635.

• Izhikevich, E.M Neural excitability, spiking, and bursting, Int. J. Bif. & Chaos, 10(2000), pp.1171--1266. (also see his article in SIAM Review)

(Non-circuit) Models for Excitable Membranes

Page 14: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Our Circuit Models

Page 15: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---
Page 16: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---
Page 17: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

By Ion Pump Characteristics

with substitution and assumption

to get

Equations for Ion Pumps

Page 18: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Dynamics of Ion Pump as Battery Charger

Page 19: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Equivalent IV-Characteristics --- for parallel sodium channels

Passive sodium current can be explicitly expressed as

Passive sodium current can be explicitly expressed as

Page 20: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Passive potassium current can be implicitly expressed as

A standard circuit technique to represent the hysteresis is to turn it into a singularly perturbed equation

Passive potassium current can be implicitly expressed as

A standard circuit technique to represent the hysteresis is to turn it into a singularly perturbed equation

Equivalent IV-Characteristics --- for serial potassium channels

0

Page 21: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---
Page 22: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Examples of Dynamics

--- Bursting Spikes --- Metastability & Plasticity --- Chaotic Shilnikov Attractor --- Signal Transduction

--- Bursting Spikes --- Metastability & Plasticity --- Chaotic Shilnikov Attractor --- Signal Transduction

Geometric Method of Singular Perturbation

Small Parameters: 0 < << 1 with ideal hysteresis at = 0 both C and have independent time scales

Page 23: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

C = 0.005

Rinzel & Wang (1997)Rinzel & Wang (1997)

Bursting Spikes

Page 24: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Metastability and Plasticity

Terminology: A transient state which behaves like a steady state is referred to as metastable.

A system which can switch from one metastable state to another metastable state is referred to as plastic.

Terminology: A transient state which behaves like a steady state is referred to as metastable.

A system which can switch from one metastable state to another metastable state is referred to as plastic.

Page 25: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Metastability and Plasticity

Page 26: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

C = 0.005

C = 0.5

Neural ChaosC = 0.5 = 0.05 = 0.18 = 0.0005I

in = 0

gK = 0.1515

dK

= -0.1382

i1 = 0.14

i2 = 0.52

EK

= - 0.7

gNa

= 1

dNa

= - 1.22

v1 = - 0.8

v2 = - 0.1

ENa

= 0.6

Page 27: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---
Page 28: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Myelinated Axon with Multiple Nodes

Inside the cell

Outside the cell

Page 29: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Signal Transduction along Axons

Neuroscience: 3ed

Page 30: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Neuroscience: 3ed

Page 31: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Neuroscience: 3ed

Page 32: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Circuit Equations of Individual Node

Cext Na K KC A

A S C A

S A C A

Na Na Na NaC

dVC I I f V E I

dtI I V I

I I V I

I V E h I

Page 33: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Coupled Equations for Neighboring Nodes

• Couple the nodes by adding a linear resistor between them

1 2 11 1 1 1

11

1 1 1

11 1 1

11 1 1

2 2 12 2 2 2

12

2 2 2

2

C C Cext Na K KC A

AS C A

SA C A

NaNa Na NaC

C C CNa K KC A

AS C A

S

dV V VC I I f V E I

Rdt

dII V I

dtdI

I V IdtdI

V E h Idt

dV V VC I f V E I

Rdt

dII V I

dtdI

2 2 2

22 2 2

A C A

NaNa Na NaC

I V IdtdI

V E h Idt

Page 34: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

The General Case for N Nodes

This is the general equation for the nth node

In and out currents are derived in a similar manner:

1n

n n n n n nCout inNa K KC A

nn n nAS C A

nn n nSA C A

nn n nNa

Na Na NaC

dVC I I f V E I I

dtdI

I V Idt

dII V I

dtdI

V E h Idt

1 1

1

1

if 1

if 1

if 1

0 if

extn n nout C C

n

n nC Cn nin

I nI V V

nR

V Vn NI R

n N

Page 35: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

C=.1 pF C=.7 pF

(x10 pF)

Page 36: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

C=.7 pF

Page 37: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Transmission Speed

C=.01 pFC=.1 pF

Page 38: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---
Page 39: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---

Closing Remarks:

The circuit models can be further improved by dropping the serial connectivity of the passive electrical and diffusive currents. Existence of chaotic attractors can be rigorously proved, including junction-fold, Shilnikov, and canard attractors.

Can be fitted to experimental data.

Can be used to form neural networks.

Closing Remarks:

The circuit models can be further improved by dropping the serial connectivity of the passive electrical and diffusive currents. Existence of chaotic attractors can be rigorously proved, including junction-fold, Shilnikov, and canard attractors.

Can be fitted to experimental data.

Can be used to form neural networks.

References: A Conceptual Circuit Model of Neuron, Journal of Integrative Neuroscience, 2009. Metastability and Plasticity of Conceptual Circuit Models of Neurons, Journal of Integrative Neuroscience, 2010.

References: A Conceptual Circuit Model of Neuron, Journal of Integrative Neuroscience, 2009. Metastability and Plasticity of Conceptual Circuit Models of Neurons, Journal of Integrative Neuroscience, 2010.

Page 40: Bo Deng University of Nebraska-Lincoln Topics:  Circuit Basics  Circuit Models of Neurons --- FitzHuge-Nagumo Equations --- Hodgkin-Huxley Model ---