biodiversity, biosecurity and industry. an example of them ... · biodiversity, biosecurity and...
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Biodiversity, Biosecurity
and Industry.
An example of them working
together on Barrow Island
July 2010
Ken Walker – [email protected]
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Barrow Island, some 202 square kms, is 90kms off the north Western Australian coastline
and is classified as a Class A Nature Reserve. ABC TV Series: In the Wild
1976 – 1981 Harry Butler
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Chevron has been producing crude oil on Barrow Island for almost 40 years.
In 2009, it was granted a license toestablish a $50 Billion Liquid Natural Gas
Plant on Barrow Island
Barrow's wildlife includes:- 15 mammal species,- 7 marine mammal species,- 110 bird species, - 54 species of reptile- and 1 species of frog.
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Quarantine Incursion Managementis a significant condition on this mining license.
Chevron must demonstrate that Non Indigenous Species (NIS) Incursionsare minimised, quickly recognised and
strategies are in place to deal with them.
Vertebrates Invertebrates!
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The best way to implement a
Quarantine Incursion Management Program
is to know what animals you have on the island.
We know the vertebrates but what about the invertebrates?
So what happened?
Quarantine Incursion Management
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Quarantine Incursion ManagementExtensive invertebrate faunal surveys were conducted on
Barrow Island between 2005 and 2007.
Queensland University of Technology
Maths Department developed a
trapping model for the Chevron
footprint on Barrow Island. It has
a theoretical capture success rate
of 95% or better.
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Quarantine Incursion ManagementA wide range of collecting was done several times a year
And replicated between 2005 and 2007 -> 14,000 specimens.
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Quarantine Incursion Management
Australian and International taxonomists examined the 14,000 specimens and identified almost 2,100 species.
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Quarantine Incursion Management
The statistics are interesting:
14,000 specimens collected
2,100 species identified
Only
268speciesknown
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Quarantine Incursion Management
These specimens are now stored at Curtin University and the WA Museum.
But how accessibleis this information
to assist withQuarantine Management
on Barrow Island?
And what aboutits biodiversity value?
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Quarantine Incursion Management
So, a few specimens of each species and their full collection datasets were sent to the
Museum Victoria’s .....
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Quarantine Incursion ManagementBiosecurity Diagnostic Image Capture Centre.
Our external collaborators
- Industry (Chevron)- CRC National Plant Biosecurity
Have provided:
- 3 Leica motorised microscopes- 2 Leica digital cameras- Image management software- Montaging software- 2 fulltime staff x 3 years
Museum Victoria has provided:
- Taxonomic expertise- Access to collections- World wide Museum Networks- Built the website
Our Motto: If it’s not Digital, then it’s Invisible!
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Quarantine Incursion ManagementImage Montaging
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Quarantine Incursion ManagementImage Montaging
A Montaged Image from 40 single images Single image
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Quarantine Incursion ManagementWe have now over 10,000 BWI montaged images
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Quarantine Incursion ManagementWe have now over 10,000 BWI montaged images
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Quarantine Incursion ManagementWe have now over 10,000 BWI invertebrate images
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Quarantine Incursion ManagementA Collembola world expert marked diagnostic characters
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Quarantine Incursion Management
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Quarantine Incursion ManagementEach species has its own web pagewith a series of diagnostic images
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Quarantine Incursion ManagementEach image can be enlarged
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Quarantine Incursion ManagementEach image can be zoomified!
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Every species provides:
Scientific Name&
Taxonomic Hierarchy
Order: Family: SubfamilyHymenoptera: Formicidae: Formicinae
What data do we have an how can we use it?
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Spatial coordinates
Temporal data- Month- Year
Every data label provides:
What data do we have an how can we use it?
Collection location code
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Database the Raw available data
What data do we have an how can we use it?
Scientific NameTaxonomic Hierarchy
Spatial coordinates
Collectionlocation
code
Temporal data
- Month- Year
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“Imagination is moreimportant than knowledge”
Albert Einstein.
“Knowledge is power.”Sir Francis Bacon
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The web world has offered two search paradigms:
-Navigational or Hierarchical search (taxonomy)which enables users to browsethe information by narrowing the scope of their queryin a predetermined order.
- Direct search allows users to simply write theirqueries as a bag of words in a text box. This approach has been madepopular by Web search engines.
Effective Web Searching?
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Uni-dimensional Searches
Direct text
“Knowledge is power.”
Navigational Hierarchical
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Uni-dimensional Navigational Searches - Science websites
“Knowledge is power.”
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Lessons from e-commerce – Faceted Searching
Whenever the customer puts in a query term:- Only show categories relevant to that query term- Only display available stock for the query term
ShoppingCart
Displayproduct
Query term
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Lessons from e-commerce – Faceted Searching
Multi-dimensional search engine:
TextNavigational Hierarchical QueryUser defined facets
SpatialShopping Cart
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“Imagination is more important than knowledge”Albert Einstein.
I’m at the Barrow Is airport (1. User defined Spatial area)and it’s 11pm. (2. Temporal data)I’ve just found an ant nest (3. Common /Classification)at the base of tree and (4. Nesting Strategy)the ants are tending aphids. (5. Feeding strategy)I can clearly see that theants have 1 petiole segment (6. Morphological character)on the abdomen.
Is this a new incursion record for Barrow Island? Show meBarrow Island ant species with images for these variables.
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“Imagination is more important than knowledge”Albert Einstein.
(1. User defined Spatial area)
(2. Temporal data)(4. Nesting Strategy)
(3. Common nameClassification)
(5. Feeding strategy)
(6. Morphological character)
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“Imagination is more important than knowledge”Albert Einstein.Multi-dimensional Query string
RSS feed
ShoppingCart
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“Imagination is more important than knowledge”Albert Einstein.
An RSS feed will alert you to anynew additions that match yourquery string.
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“Imagination is more important than knowledge”Albert Einstein.
“Shopping Cart” You select what images you want to compare
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“Imagination is more important than knowledge”Albert Einstein.
A Comparative Image table is built in real-time to your selections.
You can savethese results
to yourPersonal
Dashboard.
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“Imagination is more important than knowledge”Albert Einstein.
Saved to your personal dashboard.
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“Imagination is more important than knowledge”Albert Einstein.
If you return with a specimen for examination under a microscope, Character State analysis can be used to identify to species.
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“Imagination is more important than knowledge”Albert Einstein.
Think of the possibilities to play with the data!
Show me the fauna at the accommodation centre.
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“Imagination is more important than knowledge”Albert Einstein.
Think of the possibilities!Show me the known native bee fauna on theVic / SA border and their plant-host associations.
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“Imagination is more important than knowledge”Albert Einstein.
Think of the possibilities!Show me Victorian butterflies with ant associations from some area.
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Think of the possibilities!
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BowerBird
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BowerBird
Ability for Biosecurity or Biodiversity or Citizen ScienceTo request identification assistance.
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BowerBird
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BowerBird
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Remote Microscopy
Diagnostic Events
Expert Register
ALA Specimen
Data
PaDIL
DNA Bank
PBT BowerBirdTriage
Formal
Informal
Casual
BioSirt
PHA
APPDOZCAM
National
International
SPHDS
Species Pages AQIS
Sensitive Data Filter
Sensitive Data Filter
AVHHerbaria
Other data sources
Protocols Contingency
Citizen Science
ABINALA
Overseas Contributors
Other data sources
CRC NPBDAFF
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“Imagination is moreimportant than knowledge”
Albert Einstein.
“Knowledge is power.”Sir Francis Bacon
Biosecurity Industry Biodiversity