2018 antioxidant enzymes presentation v7(1)genomics.unl.edu/rbc_2018/course_files/s5.pdf ·...
TRANSCRIPT
AntioxidantEnzymes
Leilei ZhangFlorianSchoberYuxiang ZhuDanielleScott
VeronicaCostiniti
Outline
• Superoxidedismutase(SODs)• Catalases• Peroxiredoxins• Glutathioneperoxidase
(Borgstahl GE, 1996; Miller AF, 2012)
Superoxide dismutase (SOD)
Superoxide dismutase (SODs) is an enzyme that catalyzes the dismutation of the superoxide (O2
−) radical into either ordinary molecular oxygen (O2) or hydrogen peroxide (H2O2).
There are three major families of superoxide dismutase, depending on the protein fold and the metal cofactor. In prokaryotes, genes are named by SodA, B, C; In eukaryotes, genes are named by Sod1, 2, 3.
Structure of a human Mn superoxide dismutase 2 tetramer.
Organism Gene/Product Localization
E. coli SodA/Mn-SOD Cytosol
SodB/Fe-SOD Inner membrane
SodC/Cu, Zn-SOD Periplasm
B. subtilis SodA/Mn-SOD Cytosol
S. cerevisiae Sod1/Cu, Zn-SOD Cytosol
Sod2/Mn-SOD Mitochondrial matrix
Human Sod1/Cu, Zn-SOD Cytosol
Sod2/Mn-SOD Mitochondria
Sod3/ExtracellularCu, Zn-SOD
Extracellular space
(Miller AF, 2012; Inaoka T et al, 1998; Park J et al, 1998)
SOD Genes
SOD’s Overall Reaction
Tohru Fukai,etal.Antioxidants&RedoxSignaling.2011
Lennicke etal.Cell CommunicationandSignaling.2015
SOD in Redox Signaling
Tohru Fukai,etal.Antioxidants&RedoxSignaling.2011
SOD in Redox Signaling
Outline
• Superoxidedismutase(SODs)• Catalases• Peroxiredoxins• Glutathioneperoxidase
2H2O2 ---->O2 +2H2O.
Cofactor:Heme &NADPH
H2O2 +Fe(III)-E→H2O+O=Fe(IV)-E(.+)
H2O2 +O=Fe(IV)-E(.+)→H2O+Fe(III)-E+O2
Catalase
Majorcatalasegenesindifferentspecies
Humans CATgene(EC1.11.1.6)Cytogeneticlocation:11P13
E.coli: katG:encodesbifunctionalcatalase-peroxidaseHPIkatE :encodemonofunctional catalaseHPII(alsorequiresfunctionalkatF gene)katP :foundinthelargeplasmidofenterohaemorrhagic EscherichiacoliO157:H7(similartokatG)
B.subtilis Ingrowingcells:katA (major,expressionlevelscorrelatewithH2O2);katB(notrespondstoH2O2)Spore-specific:katX (enhancesresistanceofgerminatingsporestoH2O2)
S.cerevisiae CTA&CTT
Catalaselocalization
Mainlyinperoxisomeinmammals;
Alsofoundincytosolandmitochondrial.
Catalaseassociateddiseases
Acatalasemia(Takahara disease):Individualsopensores(ulcers)insidethemouththatledtothedeathofsofttissue.
Neurodegenerativedisorders
Outline
• Superoxidedismutase(SODs)• Catalases• Peroxiredoxins• Glutathioneperoxidase
Peroxiredoxins
• Antioxidantenzymesthatreduceanddetoxifyhydrogenperoxide,peroxynitriteandawiderangeoforganichydroperoxides.
• Thiol-specificantioxidantproteins• Controlcytokine-inducedperoxidelevels• Threeclasses:typical2-Cys,atypical2-Cys,and1-Cys
• Localizedprimarilyincytosol– Canalsobefoundwithinmitochondria,chloroplasts,andperoxisomes(associatedwithnucleiandmembranes)
PeroxiredoxinReaction:Step1• Peroxidasereactioncomposedoftwostepsaroundredox-
activecysteine• Step1:consistentacrossallclassesofperoxiredoxins
– Peroxidaticcysteineattackstheperoxidesubstrateandisoxidizedtoacysteinesulfenicacid
Wood,Z.et.al.2003
PeroxiredoxinReaction:Step2• Step2:resolutionofcysteinesulfenicacid
– Differentacrossthethreeclasses• Typical2-CysPeroxiredoxins
– Peroxidaticcysteinesulfenicacidfromonesubunitisattackedbytheresolvingcysteineoftheothersubunit
• Resultsintheformationofanintersubunitdisulfidebonewhichisthenreducedtocompletethecatalyticcycle.
• Atypical2-CysPeroxiredoxins– Samemechanismastypical2-Cys,butare
functionallymonomeric• Boththeperoxidaticcysteineandresolvingcysteine
arecontainedwithinsamepolypeptide
• 1-CysPeroxiredoxins– Conserveonlytheperoxidaticcysteineanddo
notcontainaresolvingcysteine• Cysteinesulfenicacidisreducedbythiol-containing
electrondonors• Thioldonorformstransientmixeddisulfidebondswith
theenzyme,followedbyreductionbyaseconddonorthioltorecycletheenzyme
Wood,Z.et.al.2003
PeroxiredoxinReaction:Step2• Step2:resolutionofcysteinesulfenicacid
– Differentacrossthethreeclasses• Typical2-CysPeroxiredoxins
– Peroxidaticcysteinesulfenicacidfromonesubunitisattackedbytheresolvingcysteineoftheothersubunit
• Resultsintheformationofanintersubunitdisulfidebonewhichisthenreducedtocompletethecatalyticcycle.
• Atypical2-CysPeroxiredoxins– Samemechanismastypical2-Cys,butare
functionallymonomeric• Boththeperoxidaticcysteineandresolvingcysteine
arecontainedwithinsamepolypeptide
• 1-CysPeroxiredoxins– Conserveonlytheperoxidaticcysteineanddo
notcontainaresolvingcysteine• Cysteinesulfenicacidisreducedbythiol-containing
electrondonors• Thioldonorformstransientmixeddisulfidebondswith
theenzyme,followedbyreductionbyaseconddonorthioltorecycletheenzyme
Wood,Z.et.al.2003
PeroxiredoxinReaction:Step2• Step2:resolutionofcysteinesulfenicacid
– Differentacrossthethreeclasses• Typical2-CysPeroxiredoxins
– Peroxidaticcysteinesulfenicacidfromonesubunitisattackedbytheresolvingcysteineoftheothersubunit
• Resultsintheformationofanintersubunitdisulfidebonewhichisthenreducedtocompletethecatalyticcycle.
• Atypical2-CysPeroxiredoxins– Samemechanismastypical2-Cys,butare
functionallymonomeric• Boththeperoxidaticcysteineandresolvingcysteine
arecontainedwithinsamepolypeptide
• 1-CysPeroxiredoxins– Conserveonlytheperoxidaticcysteineanddo
notcontainaresolvingcysteine• Cysteinesulfenicacidisreducedbythiol-containing
electrondonors• Thioldonorformstransientmixeddisulfidebondswith
theenzyme,followedbyreductionbyaseconddonorthioltorecycletheenzyme
Wood,Z.et.al.2003
PeroxiredoxinsinRedoxSignaling:Aging
Detienne,G.et.al.AgingResearchReviews.2018.
Outline
• Superoxidedismutase(SODs)• Catalases• Peroxiredoxins• Glutathioneperoxidase
Biochemicalfunctionsofglutathioneperoxidases(GPXs)
• Protectionagainstoxidativestress
• Reductionoflipidhydroperoxides totheircorrespondingalcohols
• Reductionofhydrogenperoxidetowater
Glutathioneperoxidasereaction
FigurebyErinE.Battin etJuliaL.Brumaghim,2009
ThisreactiondescribesGPXSelenoproteins,butnotGPX5,7,8.
Enzyme GPX1 GPX2 GPX3 GPX4 GPX5 GPX6 GPX7 GPX8
Role DetoxificationofH2O2 andlipidperoxides
Defensebarrieragainstingestedlipidhydroperoxides
DetoxificationofH2O2 andlipidperoxides
Anti-oxidativeandanti-apoptoticactivity
MaintenanceofspermDNAintegrity
_ Stress sensorwhichleadtoGRP78chaperoneactivityincrease
_
Localization cytosolandmitochondria
cytosol Extracellularfluidsincortical peri-tubularspace
Mitochondria,cytosol,nucleus
Secretedproteininepididymis
EmbryosandBowmanglands
ERlumen ER
Jurkovič S.etal.2008;JiaoY.etal.2017
GPXenzymesandlocalization
Thankyou!