using ‘latent’ information in hazard identification albert leo biobyte corp. mckim conference...

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Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant or repressed form, but usually capable of being evoked, expressed, or brought to light."

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Page 1: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant

Using ‘LATENT’ Information In

Hazard Identification

Albert LeoBioByte Corp.

McKim Conference 2006

Oxford Dictionary: Latent: "existing in hidden, dormant or repressed form, but

usually capable of being evoked, expressed, or brought to light."

Page 2: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant

•CLOGP calculations are based on fundamental Physico-Chemical principles, but this information in Calculation Details is seldom viewed or used--only the “bottom line.”

•The CQSAR database of over 13,000 bio- and over 7,000 PChem equations has needed a friendly MAP to guide users to their special needs.

•BioLoom and QSAR-Search aim to bring this ‘Latency’ to Light.

Page 3: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant

2,6-di-isopropyl Aniline

•Hindered access:Hindered access:•Favors water over octanolFavors water over octanol•May effect transformation to May effect transformation to

hydroxylamine or N-nitrosoamine.hydroxylamine or N-nitrosoamine.

HBA = 0.41

Page 4: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant
Page 5: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant

QSARs on Oxidoreductase

Total = 982 (176 with Verloop B1 or B5; 37 with Taft Es)MAO = 24 (6 with B1; 1 with B5; 1 with Taft Es)

Page 6: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant

Ground water contaminant in San Antonio, TX.

Page 7: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant
Page 8: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant

Other QSARs of special interest in hazard assessment would be: #10440, BBB penetration; #6777, heart cell

communication; #6121, soil absorption; #3609, fungicidal strength.

Page 9: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant
Page 10: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant
Page 11: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant
Page 12: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant

The A & D of ADME

Log K = 0.267 CLOGP -0.047 CLOGP2 + 0.043n = 117; r2 = 0.81; SD = 0.23; Opt. Log P = 2.83

Baseline for Intestinal Absorption

Page 13: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant

Over 13 log units correction for fragment interaction.

Page 14: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant

“Eschew Obfuscation”

Motto:

Page 15: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant
Page 16: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant

4 of 48 hits: one Carbamoyl-Oxime;Three Phosphonate Esters

(all are ACCHE inhibitors and structural alerts).

Page 17: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant
Page 18: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant

Will yield 31 hits.

Page 19: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant

Herbicides all have NH attached at 2 position;

if attached elsewhere, it results in other activities.

Page 20: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant

With pyridine as second compound, it yields 33 hits.When SO2 is attached meta on pyridine, it is a diuretic;if pyrimidine also present and -NH is 2 attached, it is a

herbicide.

Page 21: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant

With imidazole as second compound: 10 hits.Angiotensin II (antihypertensives) all have acid or

amide on imidazole and -SO2 attachment on biphenyl group.

Page 22: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant

Acknowledgments

• Prof. Corwin Hansch• Prof. Toshio Fujita• Dr. Gilman Veith• Dr. Alka Kurup• David Hoekman• Plus dozens of European and Asian colleagues

who spent their Sabbaticals at Pomona College and the dozens of Post-Doctorals who labored at the task of converting literature data into the C-QSAR database.

Page 23: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant

Solute HBD

Antipyrene 0.00

Ethylene glycol 0.50

Thymine 0.80

Urea 0.84

Thiourea 0.84

Sucrose 2.64*

Sucrose 0.90**

*Abraham’s values if additive**If % HBD loss same as HBA loss

CLOGP range: 7.7 log units(-3.09 to +4.68)

Platt-Abraham larger set:Log BB = 0.0.21 + 0.463E -0.864S – 0.564A – 0.731B + 0.933Vx -0.56 I1

n = 148; r2 = 0.745; s = 0.343

Page 24: Using ‘LATENT’ Information In Hazard Identification Albert Leo BioByte Corp. McKim Conference 2006 Oxford Dictionary: Latent: "existing in hidden, dormant