understanding microbes helps explain nutrien cyclint g...

2
Understanding Microbes Helps Explain Nutrient Cycling By Dan Lloyd, Doug Soldat and Ten Baiser QUICK TIP As sure as spring is just around the corner, Poa annuaseedheads will be popping up in greens and fairways. Reduced flowering through use of plant growth regulators will gradually lower the Poaseedbank in the soil and aid in Poa reduction. Proxy® plant growth regu- lator provides excel- lent Poa and white clover seedhead suppression. Apply Proxy approximately 10 days before expected spring flush of Poa seed- heads. A s urban areas continue to expand into the rural landscape, agricultural land is converted to turfgrass cover in the form of golf courses, parks, athletic fields and lawns. With urbanization expected to increase 79 percent in the United States over the next 25 years (Alig et al, 2004), turfgrass ecosystems inherit an even more prominent role in urban nutrient cycling, water manage- ment and carbon interactions. Previous research has examined nutrient use and carbon sequestration by turfgrass and other natural and agricultural ecosystems. However, little is known about the tiny crea- tures that orchestrate these processes: soil microorganisms. The study of soil microorgan- isms is difficult on a number of levels. First, we can' t see them, so they are out of sight and out of mind. Second, most methods for studying these critters are rife with difficulties. Third, while we can identify thousands of different species, we only really know what a small per- centage of them are doing in the soil. In short, we have a lot left to learn. By understanding what microbes are doing and under what conditions they dominate, we can learn more about how to improve nutrient and organic matter cycling in turfgrass areas. Soil microorganisms have an enormous influence on plant-soil interactions crucial for maintaining healthy turfgrass. Perhaps the most important of these interactions is the cycling of nutrients, especially nitrogen. As much as half of applied nitrogen fertilizer can be consumed by the microbial community within three days. This immobilized nitrogen is only temporarily unavailable to the plant and is re-released, or mineralized, over time depend- ing on climate and soil properties along with the demographic and activity of the microbial pool. Substantial amounts of both soluble and slow-release nitrogen fertilizer sources undergo several transformations between ammonium, nitrate and organic nitrogen before finally being absorbed by the plant. Soil microorgan- isms are the behind-the-scenes facilitators of nitrogen immobilization, mineralization and transformations in the soil. Organic matter accumulation is another turf-management issue of particular concern to golf course managers because of its signifi- cance on playing conditions. Once again, the rate of organic matter degradation and accu- mulation is dependent on the population and activity of the soil microbial community. With such important roles in these fundamental processes in turf management, an increased understanding of this active and complex population could enable turf managers to use these soil microbes to their advantage. Understanding and potentially manipulating this community could have significant impli- cations on turf-management strategies. Studying soil microorganisms is notori- ously difficult, and there are several different methods that can be used, each with their own inadequacies. The method we used to study the multitude of microorganisms in the soil was to identify them by their unique fatty acids (PLFA-FAME analysis) and then lump the individual species into broadly defined groups. We can then study how the groups dominate in different environments. To obtain a representative sample, we col- lected soil samples from 42 turfgrass sites in southern Wisconsin. We then analyzed the soil to see the relative distribution of the vari- ous functional groups and then compared the functional groups to the soil properties. The groupings, or functional groups, of microor- ganisms are listed here: • Gram positive bacteria (GPB) have a rigid cell wall and are tolerant of stressful conditions. These bacteria are usually domi- nant in extreme environments, and can form spores and remain in a dormant condition until favorable growing conditions return. • Gram negative bacteria (GNB) have weak cell walls and require a "biofilm" to survive. These bacteria are important for all aspects of the nitrogen cycle (immobilizing, Continued on page 52

Upload: duongthuy

Post on 12-Apr-2018

216 views

Category:

Documents


1 download

TRANSCRIPT

Understanding Microbes Helps Explain Nutrient Cycling By Dan Lloyd, Doug Soldat and Ten Baiser

Q U I C K T I P

As sure as spring is just around the corner, Poa annuaseedheads wi l l be popping up in greens and fairways. Reduced flowering through use of plant growth regulators will gradually lower the Poaseedbank in the soil and aid in Poa reduction. Proxy® plant growth regu-lator provides excel-lent Poa and white clover seedhead suppression. Apply Proxy approximately 10 days before expected spring flush of Poa seed-heads.

As urban areas cont inue to expand into the rural landscape, agricultural land is converted to turfgrass cover in t h e

f o r m o f gol f courses, parks, a th le t i c fields and lawns. W i t h urbanizat ion e x p e c t e d t o increase 7 9 percent in the Uni ted States over the next 2 5 years (Alig e t al, 2 0 0 4 ) , turfgrass ecosystems inherit an even m o r e prominent role in urban nutrient cycling, water manage-m e n t and carbon interactions.

Previous research has examined nutrient use and carbon sequestration by turfgrass and o ther natural and agricultural ecosystems. However, little is known about the tiny crea-tures that orchestrate these processes: soil microorganisms. T h e study of soil microorgan-isms is difficult on a number o f levels. First, w e can' t see them, so they are out o f sight and out o f mind. Second, most methods for studying these critters are rife with difficulties. Third, while w e can identify thousands o f different species, w e only really know what a small per-centage o f t h e m are doing in the soil. In short, we have a lot left to learn. By understanding what microbes are doing and under what conditions they dominate , w e can learn m o r e about how t o improve nutrient and organic matter cycling in turfgrass areas.

Soil microorganisms have an e n o r m o u s inf luence on plant-soil interactions crucial for maintaining heal thy turfgrass. Perhaps the most important o f these interactions is the cycling o f nutrients, especially nitrogen. As much as half o f applied nitrogen fertilizer can be consumed by the microbial communi ty within three days. This immobilized nitrogen is only temporarily unavailable to the plant and is re-released, or mineralized, over t ime depend-ing on c l imate and soil properties along with the demographic and activity o f the microbial pool. Substantial amounts o f both soluble and slow-release nitrogen fertilizer sources undergo several transformations between ammonium,

nitrate and organic nitrogen before finally being absorbed by the plant. Soil microorgan-isms are the behind-the-scenes facilitators o f

nitrogen immobil ization, mineralization and transformations in the soil.

Organic mat ter accumulat ion is another turf -management issue o f particular concern to golf course managers because o f its signifi-cance on playing conditions. O n c e again, the rate o f organic matter degradation and accu-mulation is dependent on the population and activity o f the soil microbial community . With such important roles in these fundamental processes in turf management , an increased understanding o f this act ive and c o m p l e x populat ion could e n a b l e t u r f managers t o use these soil microbes t o their advantage. Understanding and potentially manipulating this c o m m u n i t y could have significant impli-cations on turf -management strategies.

S tudying soil microorganisms is notor i -ously difficult, and there are several different m e t h o d s that can b e used, each with their own inadequacies . T h e m e t h o d w e used t o study t h e m u l t i t u d e o f microorganisms in the soil was t o identify t h e m by their unique fatty acids ( P L F A - F A M E analysis) and then l u m p t h e individual spec ies in to broadly defined groups. W e can then study h o w the groups dominate in different environments . T o obtain a representat ive sample , w e col -lected soil samples from 4 2 turfgrass sites in southern Wisconsin . W e then analyzed t h e soil t o see t h e relative distribution o f the vari-ous functional groups and then compared the functional groups to the soil properties. T h e groupings, or functional groups, o f microor-ganisms are listed here :

• G r a m posit ive bac ter ia ( G P B ) have a rigid cel l wall and are to lerant of stressful conditions. T h e s e bacteria are usually domi -nant in e x t r e m e environments , and can form spores and remain in a dormant condi t ion until favorable growing condit ions return.

• G r a m negat ive bac ter ia ( G N B ) have weak cell walls and require a "b io f i lm" t o survive. T h e s e bacteria are important for all aspects o f the nitrogen cycle ( immobil izing,

Continued on page 52

AA g r i u m

Advanced Technologies

Q U I C K T I P

Proper timing in applying nutrients to turfgrass is partially based on optimum tempera-tures necessary for growth. Optimum temperature ranges for cool- and warm-season turfgrasses are recognized and accepted in the industry. When visu-alizing a graph that measures the air or soil temperatures for an entire year, the data results in a bell-shaped curve. In North America, we observe cool temperatures in the beginning of the year and hot temperatures somewhere in the middle. Growth stages for both cool- and warm-season turfgrasses differ depending on temperature — and it's important to observe tem-peratures and feed plants accordingly. When temperatures are outside the opti-mum growth range of the plant, appli-cations of fertilizers are inefficiently utilized.

Continued from page 50 mineral iz ing, nitrifying and deni tr i fy ing) .

T h e s e bacteria are usually dominant in agri-cultural ecosystems and prairies.

• Saprophytic fungi (SF) are important for breaking down plant material and other organ-ic matter . T h e s e fungi typically dominate for-est and o ther ecosystems that produce large amounts o f relatively recalcitrant materials.

• Arbuscular mycorrhiza l fungi ( A M F ) form symbiot ic relationships with plants and trade water and nutr ients (especially phos-phorus) for carbon-conta in ing c o m p o u n d s made by t h e host plant.

• T o t a l b iomass is t h e sum o f all these funct ional groups plus all t h e addit ional microorganisms that did not fit into o n e o f the above functional group categories. V e r y little is known about t h e funct ion of these uncategorized species.

T h e turfgrass sites were found t o be b a c -terially d o m i n a t e d and part icular ly a b u n -dant in gram positive bacter ia — t h e stress tolerators. T h i s result conf i rmed what Karp and Nelson ( 2 0 0 4 ) found for soil (push-up) putt ing greens. T h e relative d o m i n a n c e o f gram posit ive bacter ia is s o m e w h a t unique to turfgrass. Typical ly, this level o f c o m m u -nity dominance by gram positive bacteria is found in e x t r e m e climates. Previous research on t h e microbial diversity o f prairies found that arbuscular mycorrhizal fungi dominate prairies fol lowed by gram negative bacteria.

T h e turfgrass soils tested had a wide range in physical and chemical properties. Bulk density ranged from 0.7 grams per cubic cent imeter . (g/cm3) to 1.4 g/cm3, organic matter from 2 percent to 18 percent, and there was a great diversity of soil texture as shown by the large ranges in sand and clay content of the soils. Regression analysis was performed to see how the microbial functional groups were affected by soil properties. Soil texture, organic matter, bulk density and soil pH had very little effect on the individual functional groups and the total microbial biomass.

However , o f t h e functional groups, sapro-phytic fungi were most sensitive t o changes in soil properties and were found t o increase in a b u n d a n c e as organic m a t t e r increased, and decrease in a b u n d a n c e as clay c o n t e n t

increased. T h e gram posit ive bacter ia also increased in abundance with increasing organ-ic matter, although the relationship between these two variables was fairly weak. W h i l e no strong linear correlat ions were found among functional groups and soil properties , a sta-tistical t e c h n i q u e known as principle c o m -ponent analysis discovered s o m e significant interactions b e t w e e n the microbial c o m m u -nity and soil propert ies . Principle c o m p o -nent analysis can be thought o f as a diversity index, which determines a unique fingerprint for each microbial c o m m u n i t y . In short , t h e results from this analysis conf i rm that micro-bial c o m m u n i t i e s are indeed inf luenced by the properties o f their soil habitats, although the differences do not break down as simply as the above ment ioned functional groups.

T h e results of this research serve s o m e -what as a census o f t h e microbial c o m m u -nity in turfgrass systems, defining t h e species d e m o g r a p h i c and t h e corresponding labor force o f the populat ion as well as t h e influ-ence o f soil properties.

W h i l e this research does not directly sug-gest h o w t h e s e populat ion d y n a m i c s can i m p r o v e t u r f quality, it provides a starting point t o m o v e that direct ion.

Dan Lloyd is a graduate student/research fellow in the soil science department at the University of Wisconsin-Madison. Doug Soldat and Teri Balser are UW-M faculty members. You can reach Lloyd at [email protected].

Al iq , R „ Kline, J., a n d M . Lkh tens te in . 2 0 0 4 . Urban iza t ion o n the US lands look ing ahead in the 21s t century , l a n d s c a p e a n d Urban P lann ing 6 9 : 2 1 9 - 2 3 4 .

Craig, N.M. 2007. Exploring biotic and social aspects of rain gardens in Dane County, Wisconsin. M.S. Thesis: University ol Wisconsin-Madison, Madison, Wl.

Karp, M . A . , a n d E.B. Nelson. 2 0 0 4 . Bac ter ia l c o m m u n i t i e s assoc ia ted w i t h c r e e p i n g bentgrass in soi l a n d sand r o o t zones . USGA Tur fgrass a n d Env i ron. Res. On l ine . 3(24) : 1 - 1 9 .

TURFGRASS TRENDS

S E C T I O N S T A F F

M a n a g i n g E d i t o r

C u r l Har ler 4 4 0 - 2 3 8 - 4 5 5 6 ; 4 4 0 - 2 3 8 - 4 1 1 6 ( fax) curt@curtharler. com

G r a p h i c D e s i g n e r

Carrie Parkh i l l 216 -706 -3780 ; 216 -706 -3712 ( fax) [email protected]

I N D U S T R Y A D V I S O R S

Jerry Qu inn

John Deere

Chris Der r i ck

A g r i u m A d v a n c e d Techno log ies

Scott W e l g e Bayer Env i r onmen ta l Science

Carmen M a g r o

F io ra t ine