the roles of momentum flux - fruleux/dresde.pdf · the roles of momentum flux in active...
TRANSCRIPT
The roles of
Momentum flux in
active multi-cellular media
Antoine Fruleux (ESPCI/P7)
Fruleux, Dresden 04/09/14
2
Phys. Rev. Lett. 108, 160601 (2012)Phys. Scr. 86, 058508 (2012)
Acta Physica Polonica B 44, 847 (2013)
adiabatic piston
My thesis: Roles of Momentum Fluxes at Different Scales
Part I: non-equilibrium steady state of adiabatic piston
Part II: Roles of Momentum Fluxes in active multicellular media
— Today’s presentation
3
Dictyostelium Discoideum : life stages
Migration stage
Vegetative stage
Aggregation stage
Culmination stage
Introduction
4
Dictyostelium Discoideum : life stagesIntroduction
5
Dictyostelium Discoideum : life stages
Migration stage
Vegetative stage
Aggregation state
Culmination stage
Introduction
6
Dictyostelium Discoideum : Chemotaxis and motility
[D. Dormann et al, Biophysical chemistry 1998 ]
single cell with cortical flow
polarization of cells:
polymerization / depolymerization of cortex
, amplitude of cortical flow
aggregate ("slug") with propagating cAMP wave
7
Cell undergoing cortical flow — neither "pusher" nor "puller"
puller pusher
pullerpusher
8
Known facts: setups
Centrigual force
Pressure difference[K. Inouye et al, J. Cell Science 1980 ]
[K. Inouye et al, Protoplasma 1984 ]
9
Known facts: results
Volume[K. Inouye et al, J. Cell Science 1980 ]
[K. Inouye et al, Protoplasma 1984 ]
Pressure differenceCentrifugal force
Total active force (E-3 N)
volume of slug (E-5 cc)
Velocity (mm/h)
Force Force
Velocity (mm/h)
Ø= 108 μm L = 528 μmØ= 167 μm L = 967 μm
Ø= 69 μm L = 432 μmØ= 122 μm L = 380 μm
Non CentrifugalCentrifugat
10
Why surprising ?
cancellationof
cortical flow
Why no total acive force contact area ??
11
Known facts: experimental results
[M.Kitami. J. Cell Science 1982 ]
confined in a tube on substrate
Force
Force
Ø= 108 μm L = 528 μmØ= 167 μm L = 967 μm
Velocity (mm/h)
Velocity (mm/h)
13
1. Coarse-graining of conserved fluxes2. Finding constitutive law for conserved fluxes3. Applying to experimental setup
key word : momentum & angular momentum fluxes
Our Approach
To understand:
&
14
1. Coarse graining of conserved fluxes2. Finding constitutive law for conserved fluxes3. Applying to experimental setup
key word : momentum & angular momentum fluxes
Our Approach
To understand:
&
15
Conservetion Equations
16
System of interest : Dense aggregation of cellular elements
Macroscopic conservation equationsfor momentum AND angular momentum
17
Macroscopic conservation equationsfor momentum AND angular momentum
microscopic linear momentum flux
macroscopic linear and angular momentum fluxes
+ Expressions in terms of microscopic parameters
18
Momentum fluxes at microscopic level:
Linear/Angular momentum conservation:
Linear momentum balance:
Angular momentum balance:
: microscopic momentum flux (= –[stress tensor])
, rank-3 pseudo-tensor. e.g.
19
Macroscopic description of the momentum flux
At the cell-level:
: Too detailed
a few quantities associated to cell / cell-cell interface
20
Macroscopic description of the momentum flux
At the cell-level:
The force at interface => force F + torque M
force: torque:
By cell on .by cell on .
= + + ...
21
Macroscopic description of the momentum flux
At the cell-level:
The relative position
The force at interface => force F + torque M
force: torque:
By cell on .by cell on .
= + + ...
22
Macroscopic description of the momentum flux
Further coarse-graining : i) No individual cells ii) Fluxes as averages of ``microsopic'' Fij , Mij , εij
Result :
Linear moment flux:
Angular moment flux:
23
Macroscopic description of the momentum flux
Neighbor distribution function
Definition:
24
Macroscopic description of the momentum flux
Redundancy
Law of action / reaction:i j
Avoid subtle cancellations of forces / torques
— key for 2nd coarsegraining
25
Macroscopic description of the momentum flux
Macroscopic fluxes :
Linear moment flux: Angular moment flux:
, coarse-grained number of neighbors.
, cell density
, average of weighted by .
The linear/angular momentum conservation
26
1. Coarse graining of conserved fluxes2. Finding constitutive law for conserved fluxes3. Applying to experimental setup
Our Approach
To understand:
&
F and M — Mechanics (dynamics)
ε — Geometry ( kinematics )
Task : express in terms of macro-state variables (order parameters)
27
Geometry
28
Reference state:
Assumptions : No cellcell reconnection
Fast dynamics
reference state
virtualisolation
reference state— : cells' polar vector — : orientation around — : chemical gradient ( // in reference state)
Slow dynamics and Fast dynamics
Geometry,
29
Three-neighbor distribution function :
In reference state :
In actual state :
Geometry,
(reference state) (actual state)
Aim :
, the mean deviation of the relative positions
Macroscopic parameters
Complicated ? Minimum necessary informations of correlations are in
30
Symmetry / redundancy:
exchange symmetry:
redundancy of viewpoint :
Symmetry / redundancy constraints on the geometry, .
Geometry,
31
The redundancy of and
Plausible assomptions : : constraints of dense packing fast varying with : statistically averaged movements slowly varying with
“K-theorem”
are linear combinations of
are uniquely determined
Geometry,
32
K-theorem δε(1,0) :
: intrinsic part due to cell polarity
macroscopic deformation
, orientational gradient
: macro variables
Geometry,
33
affine deformation non affine
term
Coarse-grained deformation of medium
Geometry,
34
(intrinsic part) (affine part) (non-affine part)
Geometry,
35
1. Coarse graining of conserved fluxes2. Finding constitutive law for conserved fluxes3. Applying to experimental setup
Our Approach
To understand:
&
● F and M — Mechanics (dynamics)
• ε — Geometry ( kinematics )
Task : express in terms of macro-state variables (order parameters)
36
Mechanics
37
( constitutive equations)
micro-environment
Passive force deviation :
Mechanics : in the bulk
38
Mechanics : in the bulk
— “Molecular-field” model of the interactions
micro-environment collectively determines
Passive force deviation :
Passive torque deviation :
— determined similarly.
changes in micro-environement
39
(reference state) (actual state)
Key ingredients: cells polarization : polar direction Chemotactic signal : gradient of cAMP
— chemotaxis of cells
disorientation of from Flow of cells Cell-cell interaction
Active force deviation :
Mechanics : in the bulk
40
passive
— “Molecular-field” model of the interactions
micro-environment
Active force deviation :
Mechanics : in the bulk
41
wi , scalar order parameter of activity of cell — magnitude of cortical flow velocity.
active
passive
— “Molecular-field” model of the interactions
micro-environment
Active force deviation :
Mechanics : in the bulk
42
From the mesoscopic parameters to the momentum fluxes:
Micro-environment: Internal cellular process:
Passive momentum fluxes: Active momentum fluxes:
Symmetry+ Weak deviation :Geometry :
(disorientation)²
Mechanics : in the bulk
43
: upper-convected time derivative. : slow dynapics= (cell-cell reconnections) +(p's relaxation)
Actual state Reference state
Commutativity of mappings:Mechanics : in the bulk
virtual relaxation
time
evol
utio
n
: flow velocity
: « elastic » deformation
44
Mechanics : in the bulkactive contribution
disoriented cell less effective cortical flow shear stress (= lateral momentum tansfer)
45
Mechanics : in the bulkactive contribution
intrinsic term passive term
46
Mechanics : in the bulkactive contribution
intrinsic term
47
Mechanics : in the bulkactive contribution
intrinsic term passive term
49
Mechanics : boundary conditionsGeometric condition :
Mechanic conditions :
Impenetrability :
Conservation of the momentum fluxes :
, rate of linear momentum passing boundary
, rate of angular momentum passing boundary
Free boundary :
Rigid boundary :
: boundary normal
and
ex.
cortex flow at boundary ``anchoring''
~ "sticky" boundary condition (active fluid version).
50
1. Coarse graining of conserved fluxes2. Finding constitutive law for conserved fluxes3. Applying to experimental setup
Our Approach
To understand:
&
F and M — Mechanics (dynamics)
ε — Geometry ( kinematics )
Task : express in terms of macro-state variables (order parameters)
51
Applications
52
Confined geometry:Setup
Open geometry:
Small parameters:
rigid BC
rigid BC
rigid BC
free BC
2h
steady state
x
y
(assumption)
53
Bulk equations and Boundary conditionsBulk equations:
Boundary conditions:Rigid BC: Mixed BC:
Momentum balance
Angular momentum balance
: coefficients
rigid BC
Mixed BC
rigid BC
rigid BC
Confined geometry: Open geometry:
54
Solution
(Active force)
(Torque)
Angular momentum balance :
55
Solution
Velocity :
Polar deviation :
"Riccati equation"
non-linearactive term characteristic length is state-dependent
Basic scales :
from the literature
comparison with the "target" data
56
Solution
Spacial scales in the solutions :
57
Solution
Spacial scales in the solutions :
58
Solution
Spacial scales in the solutions :
59
Velocity &polar vector
pre
sssu
re d
iffer
enc
e
thicknessConfined geometry
appearance ofboundary layers
60
velocity of slug
force/volume force/volume
velocity of slug
total active force
Confined geometry
[K. Inouye et al, J. Cell Science 1980 ][K. Inouye et al, Protoplasma 1984 ]
Ø= 108 μm L = 528 μmØ= 167 μm L = 967 μm
61
total active forcetotal active force
total volume total volume
Confined geometry
Non centrifugalCentrifugal
[K. Inouye et al, J. Cell Science 1980 ]
[K. Inouye et al, Protoplasma 1984 ]
62
total active force
total volume
Confined geometry
at fixed length : Saturation of total force with thickness boundary layer effect
thin sample angular momentum play a role active force volume
thick sample active force only from the boundary
63
Open geometry
[M.Kitami. J. Cell Science 1982 ]
rigid BC
free BC
Force
Velocity (mm/h)
Force
Velocity (mm/h)
64
Open geometry
[M.Kitami. J. Cell Science 1982 ]
rigid BC
free BC
Force
Velocity (mm/h)
Force
Velocity (mm/h)
65
→ Angular momentum flux is important
→ Bulk force is in fact from boundary layers
→ Active Nonlinearity modifies boundary layer thickness
CONCLUSION
PERSPECTIVE – Future projects•Numerical scheme for mesoscopic dense active medium — based on the momentum+angular momentum fluxes
•Analysis of topological defects of cell polarity (development)
•Dynamic coupling with chemical waves (cAMP)
66
Acknowledgements:
Ken Sekimoto – Univ. Paris7, ESPCI (Paris, supervisor)For collaboration, Ryoichi Kawai — Alabama Univ. (USA)For helpful discussions : Vincent Fleury, Annemiek Cornelisson, Yves Couder — Univ. Paris 7 (MSC) Bernard Derrida — ENS (LPS) Jean François Joanny (ESPCI)Reporters & Jury members : Karsten Kruse, Andrea Parmeggiani, François Graner Daniel RivelineColleagues of Gulliver (ESPCI)
Thank you for your attention.
67
68
The Roles of Momentum Fluexes in Adiabatic Piston
Other subject : Momentum Flux in NESS
Phys. Rev. Lett. 108, 160601 (2012)Phys. Scr. 86, 058508 (2012)
Acta Physica Polonica B 44, 847 (2013)
69
Solution
(Active force)(Torque)
Angular momentum balance :
Caused by : Enchoring Pressure difference
70
Confined geometry
Open geometry
experiments ?
Miror symmetric/
free surface