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Modeling Acoustic Backscatter: Gradual or Punctuated Evolution? John Horne FHL 2008 LO: Evaluate basis and assumptions underlying historical and current acoustic backscatter models for fish and zooplankton.

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Page 1: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Modeling Acoustic Backscatter: Gradual or Punctuated Evolution?

John Horne

FHL 2008

LO: Evaluate basis and assumptions underlying historical and current acoustic backscatter models for fish and zooplankton.

Page 2: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

What is a ‘Model’?

Parsimonious representation of the truth

If life was simple:

rigid body – 1 wave equation, analytic solution for 11 shapes

But

Elastic – 3 coupled scale equations, solution limited to 3 shapes: sphere, infinite cylinder, infinite rectangular slab

Page 3: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Model Categories & Analytic Methods

Organism or Structure:

Zooplankton, Fish, Body, Fish Swimbladder, Whole Fish

Rayleigh

Resonance

Geometric

Exact

Nummeric

Empirical

Statistical

Page 4: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Imaging Evolution

“… models based on simple geometric shapes, …, are inadequate, if only because such shapes are symmetrical with respect to the horizontal or transverse plane, while the general swimbladder is not.” (Foote 1985)

Walleye Pollock (Gadus chalcogrammus)

“…fish and zooplankton should be described by simple theories and models, without acoustically-superfluous extensions.” (Medwin and Clay 1998)

Walleye Pollock

CAT scans:

head to tail

Page 5: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Limitation of Geometric Forms

“… models based on simple geometric shapes, …, are inadequate, if only because such shapes are symmetrical with respect to the horizontal or transverse plane, while the general swimbladder is not.”

“The consequence of asymmetry in swimbladder form is often observed in the significant asymmetry of dorsal and ventral aspect target strength functions of the same fish.”

Foote 1985

Page 6: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Geometric Form Exception

geometric shapes are viable representations when modeling resonant or Rayleigh scattering

Why?

orientation doesn’t matter, targets are point scatterers

Page 7: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Affect of Image Resolution What level of detail is acoustically appropriate?

Jech and Horne 1998

KRM Model Predictions

Page 8: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Backscatter Model Alphabet Soup BEM - Boundary Element Method

DCM - Deformed Cylinder Model

DWBA - Distorted Wave Born Approximation

PT-DWBA - Phase-tracking DWBA

SDWBA – Stochastic DWBA

FEM - Finite Element Method

FMM - Fourier Matching Method

KA - Kirchhoff Approximation

KRM - Kirchhoff-ray Mode

MSS - Modal Series Solution

Page 9: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Model Evolution

Geometric Anatomical

Page 10: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Boundary Element Method

Calculated using Hemholtz intergral for amplitude and displacement from any point on discretized surface (where l<1/3λ)

Capabilities: valid at all frequencies, accuracy depends on quality of discretization, includes diffraction

Limitations: computationally intensive

-2

0

2

-5

0

5

-2

0

2

x (cm)y (cm)

z (c

m)

Page 11: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Deformed Cylinder Model

Exact modal series solution for infinite cylinder (used for prolate spheroid swimbladder)

Capabilities: variety of material properties

Limitations: restricted angle range, arbitrary shape

x

asb(x) k = ω / c cosθ

θ

Page 12: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Distorted Wave Born Approximation Designed for weak scattering objects, density differences, can integrate pieces to accommodate phase differences Capabilities: valid for all frequencies, at all angles, for any arbitrarily shaped object with small contrast in sound speed and density (body) Limitations: weakly scattering objects (g, h near unity), inhomogenous mediums

ki

ρ1, c1

ρ2, c2

ρ3, c3

dx

Page 13: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Fourier Mode Matching Exact anatomical representation, exact solution for finite-length objects Capabilities:, all frequencies, all orientation angles, all scattering geometries (back, forward, and bistatic), all boundary conditions Limitations: far-field scattering, axisymmetric shape, numerical implementation, frequency and/or shape irregularity, conformal mapping (single-valued radius and “needle points”)

Page 14: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Kirchhoff Approximation Surface backscatter using Kirchhoff integral

Capabilities: valid for geometric frequencies, for any shape, high or low resolution morphometry

Limitations: typically applied to swimbladder only, restricted angle range

-2

0

2

-5

0

5

-2

0

2

x (cm)y (cm)

z (cm

)

Page 15: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Kirchhoff-ray Mode Breathing mode at or below resonance (ka <0.15), surface backscatter using Kirchhoff integral, cylindrical anatomical representation

Capabilities: any shape, unlimited inclusions, backscatter from all interfaces

Limitations: forced symmetry, restricted angle range, no diffraction

Page 16: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Prolate Spheroidal Mode Scalar wave equation, spheroidal coordinates, spheroidal wave function (angle, radial function)

X axis

Dorsal View

Capabilities: theoretically valid for all frequencies, at all angles

Limitations: geometric representation, strong scattering objects (?)

Page 17: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Finite difference, time domain

G. Macaulay

plane wave, c=1491 m/s,

τ = 0.32 ms, f = 38 kHz

Black oreo (Allocyttus niger)

Page 18: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Summary Model Comparison

Model

Organism Representation

Analytic Method

BEM Anatomical, triangular mesh Hemholtz equation

Conformal Mapping

anatomical shape Hemholtz equation

DWBA deformed anatomical cylinders

line integral

KRM anatomical cylinders breathing mode + Kirchhoff

Finite Difference

actual shape, density finite difference, time domain

Page 19: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Backscatter Model Comparisons

McClatchie et al. 1996

Blue Whiting (Micromesistius australis)

37 cm

29 cm

Tilt averaged

5o, 15o

mapping, deformed cylinder, equicylinder

Page 20: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Expanded Model Comparisons

Fourier Matching Method (FMM) (aka Conformal Mapping) vs Anderson sphere, deformed cylinder, t-matrix, BEM, exact prolate spheroid, Kirchhoff approximation

Swimbladder cross-section

Reeder & Stanton 2004

Page 21: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Model Comparison to Empirical Measures Finite Boundary Element (BEM) Model and Kirchhoff approximation

Pollack (Pollachius pollachius)

Tilt angle (deg) Tilt angle (deg)

38 kHz 120 kHz

Foote and Francis 2002

Page 22: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Workshop: Herring Results

Length Frequency

Page 23: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Workshop: Herring Results

38 kHz

Lateral

38 kHz

Dorsal-Ventral

Page 24: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Comparing Models to Finite Solutions Model Comparison to

Prolate Spheroid Model Comparison to Jack

Mackerel Swimbladder

PSMS: Prolate Spheriod Modal Series; KA: Kirchhoff Approximation; KRM: Kirchhoff Ray Mode; FE: Finite Element

Macaulay et al. 2013

Page 25: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Backscatter Modeling Conclusions

- Organism representations evolved from geometric shapes to anatomical detail, exact to numeric solutions

- Image resolution continues to increase, no standard

- Validation by comparison to exact solutions, other models, empirical measures

- Gradual evolution with punctuations

Page 26: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Kirchhoff-Ray Mode Model

Page 27: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Length (mm)100 200 300 400 500

Targ

et S

treng

th (d

B)

-55

-50

-45

-40

-35

-30

120 kHz90 degrees

KRM Backscatter Predictions

Frequency (kHz)0 100 200 300 400

Targ

et S

treng

th (d

B)

-55

-50

-45

-40

-35

-30

150 mm90 degrees

Tilt Angle (degrees)70 80 90 100 110

Targ

et S

treng

th (d

B)

-55

-50

-45

-40

-35

-30

120 kHz200 mm

Length

Frequency

Tilt

Page 28: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Backscatter Response Surface: Walleye Pollock

Page 29: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

KRM Backscatter Ambit

Page 30: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Validation of Kirchhoff-Ray Mode Model

Comparison to Nakken and Olsen (1977) Atlantic cod (Gadus morhua) maximum target strength measurements at 38 kHz

Comparison to Jech et al. (1995) Threadfin shad (Dorosoma petenense) target strength measurements at 120, 200, and 420 kHz.

Page 31: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Comparing Models to Empirical Measures

60 80 100 120 140 160

Targ

et S

treng

th (d

B)

-54

-52

-50

-48

-46

-44

-42

-40

-38

Length (mm) Caudal Length (mm)400 600 800 1000 1200

Targ

et S

treng

th (d

B)

-70

-60

-50

-40

-30

-20

-70

-60

-50

-40

-30

-20

Lavnun 120 kHz Paddlefish 200 kHz

Horne et al. 2000 Hale et al. 2003

Page 32: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Comparing Models to Empirical Measures

Walleye pollock

100 200 300 400 500 600

Targ

et S

treng

th (d

B)

-55

-50

-45

-40

-35

-30

-25

TS=20log(L)-66

Fork Length (mm)100 200 300 400 500 600

Targ

et S

treng

th (d

B)

-60

-55

-50

-45

-40

-35

-30

-25

(b) 120 kHz

(a) 38 kHz

38 kHz

120 kHz

Horne 2003

Page 33: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Fish Ensemble Visualization

Page 34: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Fish-Cam Visualization

Page 35: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Acoustic Fish Behavior Simulator

Page 36: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Model Applications: TS - length

Length (mm)100 200 300 400 500 600

Targ

et S

treng

th (d

B)

-50

-45

-40

-35

-30

-25

TS=20log(L)-66

38 kHz n= 48 fish

Horne 2003

Page 37: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Acoustic Backscatter Characterization

eulachon

(Thaleichthys pacificus)

capelin

(Mallotus villosus)

Pacific herring

(Clupea pallasii)

walleye pollock (Theragra

chalcogramma)

Atka mackerel (Pleurogrammus monopterygius)

Gauthier & Horne 2004a

Page 38: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Acoustic Species Discrimination

capelin

Pacific herring

walleye pollock

Atka mackerel

eulachon

Gauthier & Horne 2004b

200-12 kHz

120-38 kHz

Page 39: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Aquatic Organism Distributions

Aggregation types: individuals; small pure groups; mixed resolvable groups; unresolvable groups

Page 40: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Estimating Population Abundance

Jech & Horne 2001

Page 41: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Walleye Pollock Tilt Distributions: 8 m3 Laboratory Tank

Tilt (degrees)0 20 40 60 80 100 120 140 160 180

Freq

uenc

y

0

25

50

75

200

n=932density p=0.17time p=0.89

head up head down

Page 42: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

W Pollock Length & Target Strengths

Walleye Pollock Lengths

Length (cm)

25 30 35 40 45 50 55

Freq

uenc

y

0

10

20

30

40

50

60

25 30 35 40 45 50 550

10

20

30

40

50

60

Target Strength (dB)-60 -50 -40 -30 -20

Freq

uenc

y

0

50

100

150

200

250

300

Walleye Pollock Target Strength

-60 -50 -40 -30 -20

Freq

uenc

y

0

50

100

150

200

250

300

Freq

uenc

y

haul 77n=427

haul 78n=364

38 kHz

120 kHz

Bering Sea, July 2000

Page 43: Modeling Acoustic Backscatter: Gradual or Punctuated ...courses.washington.edu/fish538/lectureNotes/BS modeling 8.pdf · Limitation of Geometric Forms “… models based on simple

Simulating TS Distributions

-60 -50 -40 -30 -20

Freq

uenc

y

0

50

100

150

200

250

300

-70 -60 -50 -40 -30 -20

Freq

uenc

y

0

10

20

30

40

50

-70 -60 -50 -40 -30 -20

Freq

uenc

y

0

10

20

30

40

50

60

70

-70 -60 -50 -40 -30 -20

Freq

uenc

y

0

5

10

15

20

25

30

35

Target Strength (dB)

-60 -50 -40 -30 -20

Freq

uenc

y

0

50

100

150

200

250

300

-70 -60 -50 -40 -30 -20

Freq

uenc

y

0

10

20

30

40

50

-70 -60 -50 -40 -30 -20

Freq

uenc

y

0

10

20

30

40

50

-70 -60 -50 -40 -30 -20

Freq

uenc

y

0

10

20

30

40

50

Target Strength (dB)

In situ 38 kHz

leng-freq+tilt-freq+KRM

In situ 120 kHz

leng-freq+tilt-freq+KRM

leng-freq+tilt-freq+KRM leng-freq+tilt-freq+KRM

leng-freq+tilt-freq+KRM leng-freq+tilt-freq+KRM

38 kHz 120 kHz

Length + Tilt +

KRM

In situ