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Microstructure and Materials Informatics
University of Florida - May 20th 2013
Krishna Rajan
Microstructural Data and Information Role of informatics and microstructure Microscopy and informatics - SEM - TEM - APT Summary
Outline
Krishna Rajan: Iowa State University
1. “Crystallographic Evolution in Directionally Solidified Microstructures” J. Trogolo and
K.Rajan in Microstructure Evolution: Characterization and Modeling, pp.39-47 eds. J. Dantzig and S. Marsh, TMS ,Warrendale (1998)
2. Microtexture and Anisotropy in Wire Drawn Copper”, R.Petkie and K.Rajan Materials Science and Engineering A 257 185-197 ( 1998).
3. Rodrigues-Frank Representations of Crystallographic Texture in Electron Backscatter Diffraction in Materials Science Eds. Schwartz, A.J.; Kumar, M.; Adams, B.L pp. 39-50 Kluwer Academic NY (2000).
4. Refining Spatial Distribution Maps for Atom Probe Tomography via Data Dimensionality Reduction Methods". S.K.Suram and K.Rajan ; Journal of Microscopy and Microanalysis 18 , 941-952 (2012)
5. "A Graph-Theoretic Approach for Characterization of Precipitates in Alloys from Atom Probe Tomography data S. Samudrala, O. Wodo, S. K. Suram, S. Broderick, K. Rajan, B. Ganapathysubramanian, " Computational Material Science, vol. , (in press-2013)
6. Data Mining for Isotope Discrimination in Atom Probe Tomography: S.R. Broderick, A. Bryden, S.K. Suram and K. Rajan : Ultramicroscopy (in press - , http://dx.doi.org/10.1016/j.ultramic.2013.02.001 -2013)
References
Krishna Rajan: Iowa State University
Multidimensional
Microstructural characteristics
Features controlling microstructure –property relationships
Challenge:
To construct Robust Correlations
between microstructure, chemistry, processing and properties
Methods:
Data analysis
•Statistical learning
Materials modeling
•Electronic structure
•Microstructure
•Continuum property
Informatics
Materials functionality= F ( x1 , x2 , x3 , x4 , x5 , x6 , x7 , x8 ……)
Krishna Rajan: Iowa State University
Signal and Spatial Domains
Krishna Rajan: Iowa State University
Signal and Spatial Domains
Krishna Rajan: Iowa State University
N. Bonnet J. Microscopy 190 2-18 (1997)
G. Mobus, R. Schweinfest, T. Gemming, T. Wagner and M. Ruhle J. Microscopy vol 190 , pts 1 / 2 April / May 1998 , pp. 109-130
Data Cube
Krishna Rajan: Iowa State University
Krishna Rajan: Iowa State University
Mechanical property- microstructure data cube
Mechanical property- microstructure data cube
Krishna Rajan: Iowa State University
Mechanical property- microstructure data cube- outlier detection
Krishna Rajan: Iowa State University
Mechanical property- microstructure data cube- outlier detection
Krishna Rajan: Iowa State University
Mechanical property- microstructure data cube- outlier detection
Krishna Rajan: Iowa State University
Krishna Rajan: Iowa State University
Informatics guided imaging: where to look
“Crystallographic Evolution in Directionally Solidified Microstructures” J.
Trogolo and K.Rajan in Microstructure Evolution: Characterization and Modeling, pp.39-47 eds. J. Dantzig and S. Marsh, TMS ,Warrendale (1998
N data channels
Energy loss
DE
E
DE
Extracted image spectrum
K.Kelton, X.Li and K. Rajan J. Non-Crystalline Solids (2005)
Al-RE-Ni Glass
x
y
Krishna Rajan
Chemistry- microstructure data cube- correlation imaging
Krishna Rajan: Iowa State University
Atom Probe : imaging modalities
Krishna Rajan: Iowa State University
Atom Probe : a multidimensional problem
Krishna Rajan: Iowa State University
Chemical Noise Chemical Noise f(Crystal structure, pulse energy, pulse fraction, surface diffusion, specimen geometry …) .
APT
Spatial Noise in APT
Spatial Noise f(Crystal structure, dhkl , missing data, local magnification effects, reconstruction errors, pulse energy, pulse fraction, surface diffusion …)
Phenomenological relationships between most of these parameters and their effect on spatial/chemical noise are unknown. Thus, data driven treatment is necessary for analysis of noise in APT data.
Signal/ Noise enhancement
Krishna Rajan: Iowa State University
PCA
NLDR
Geometric
Distance
Euclidian Geodesic
(eg. IsoMap)
Other
(eg. KPCA)
Topology
PDL
(eg. SOM)
DDL (eg. LLE)
Other
AA NN
Data dimensionality reduction
Krishna Rajan: Iowa State University
Spatial –Signal Domain noise
Krishna Rajan: Iowa State University
Plane A Plane B
Anti-correlation
d110
A B A B A B A B A
Ideal Material
APT data
z-SDMs d0
11
Crystal structure can be observed
and anti-correlation in the
structure between adjacent planes is
observed
Does this slice have any crystallographic information. Can we salvage this information?
Spatial –Signal Domain noise
Krishna Rajan: Iowa State University
(40000*200)
Right Singular Vectors capturing correlations in the SDM data
Projection of SDM data onto right singular vectors
Spatial –Signal Domain noise : quantification
Krishna Rajan: Iowa State University
Noise Reduction achieved consists of two aspects: Noise reduction based on data reconstruction using only the Structural Relevant Singular
Vectors. Noise reduction by identifying xy-SDMs that contribute to noise within the SRSVs.
EVSUX T
SRSVSRSVSRSV
(40000x200)
Structure Signal Noise alienated in the error term.
Spatial –Signal Domain noise : quantification
Krishna Rajan: Iowa State University
Sectioning of Data set
Eigenvalue Decomposition
(PCA)
TOF
Load
ings
Co
un
t
TOF
Raw TOF Spectra: No obvious patterns
Eigenspectra: “Hiddn” patterns
Spatial –Signal Domain noise : uncovering “hidden” patterns
Krishna Rajan: Iowa State University
Data Mining for Isotope Discrimination in Atom Probe Tomography: S.R. Broderick, A. Bryden, S.K. Suram and K. Rajan : Ultramicroscopy (in press - , http://dx.doi.org/10.1016/j.ultramic.2013.02.001 -2013)
24Mg2+
25Mg2+ 26Mg2+
27Al2+
Mg2+ Al2+
Before After
TOF TOF
Spatial –Signal Domain noise : uncovering “hidden” patterns
Krishna Rajan: Iowa State University
Data Mining for Isotope Discrimination in Atom Probe Tomography: S.R. Broderick, A. Bryden, S.K. Suram and K. Rajan : Ultramicroscopy (in press - , http://dx.doi.org/10.1016/j.ultramic.2013.02.001 -2013)
What data do we need?
Krishna Rajan: Iowa State University
Extracting information beyond models and experiment 3D imaging Quantification of uncertainty and noise Stereology: back to basics
Summary
Krishna Rajan: Iowa State University