microbial diversity: (plp329). general topic: prokaryotic microbes august 29l.s. pierson...

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Microbial Diversity: (PLP329)

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Page 2: Microbial Diversity: (PLP329). General Topic: Prokaryotic Microbes August 29L.S. Pierson Introduction to Tree of Life; The Pseudomonads in Biological

General Topic: Prokaryotic Microbes

August 29 L.S. PiersonIntroduction to Tree of Life; The Pseudomonads in Biological Control

September 5 R. Maier The Pseudomonads in Bioremediation

September 12 C. Rensing Metal Processing in Prokaryotes (Reading 1)

September 19 C. Kennedy Molecular Phylogeny of Microbes

September 26 C. Kennedy Symbiotic Proteobacteria in Plants

October 3 G. Songer Pathogenic Anaerobes

October 10 W. Nicholson The World of Gram Positive Bacteria

October 17 N. MoranSymbiotic Proteobacteria in Insects General Topic: Eukaryotic Microbes (Reading 1, 2)

General Topic: Eukaryotic Microbes

October 24 C. Sterling The Sarcomastigophora

October 31 M. Riggs The Apicomplexa: selected members

November 7 M. Orbach The World of Fungi General Topic: A Virus for Every Domain

General Topic: A Virus for Every Domain

November 14 B. Fane The Microviridae of Bacteria

November 21 J. Collins Animal Virus Diversity

December 5 J. Brown The Geminiviruses of Plants and Insects

Microbial Diversity 329: Lecture Schedule

Page 3: Microbial Diversity: (PLP329). General Topic: Prokaryotic Microbes August 29L.S. Pierson Introduction to Tree of Life; The Pseudomonads in Biological

http://ag.arizona.edu/PLP/courses/plp329/microbial_diversity.html

Thursdays, 4:00 - 5:15PM, Marley 341HWhere, When:

Course Website:

Microbial Diversity 329: Organization

Grading:

Midterm: take-home essay

Final: take-home essay

Page 4: Microbial Diversity: (PLP329). General Topic: Prokaryotic Microbes August 29L.S. Pierson Introduction to Tree of Life; The Pseudomonads in Biological

Why study biodiversity?

1. Humans altering/degrading environment at accelerating rate.

2. New uses of biodiversity for reducing suffering & environmental destruction.

3. Much diversity being lost through extinction.

If estimate 5 million spp., then can calculate rate at ~17,500 spp. / yr.

Page 5: Microbial Diversity: (PLP329). General Topic: Prokaryotic Microbes August 29L.S. Pierson Introduction to Tree of Life; The Pseudomonads in Biological

Estimates of biodiversity

Viruses 1,000

MoneraBacteria, Myxoplasma, Cyanophycota 4,760

FungiZygomycota, Ascomycota, etc. 46,983

Algae 26,900

Plantae 248,428

Protozoa 30,800

Animalia (including Arthropoda) 989,761

Chordata (Tunicata, Vertebrata, etc.) 43,852

Total 1,392,485

Kingdom/Major Division No. described species

(E.O. Wilson, The Current State of Biological Diversity, Nat. Acad. Sciences, 1988)

Estimates of total diversity between 5-30 million species!!!!

Page 6: Microbial Diversity: (PLP329). General Topic: Prokaryotic Microbes August 29L.S. Pierson Introduction to Tree of Life; The Pseudomonads in Biological

41,00041,000

250,000250,000

750,000750,000

Page 7: Microbial Diversity: (PLP329). General Topic: Prokaryotic Microbes August 29L.S. Pierson Introduction to Tree of Life; The Pseudomonads in Biological

Why biodiversity important?

Knowledge of biodiversity will mean little to most humans.

Depend completely on < 1% living spp. for our existence.

Myers (1984) est. utilize ~ 7,000 kinds of plants for food.

> 75,000 edible plants in existence.

Rest untested fallow.

Barely touched upon organisms that are beneficial for:

Pharmaceuticals

Fibers

Petroleum substitutes

Pest and disease controls

Page 8: Microbial Diversity: (PLP329). General Topic: Prokaryotic Microbes August 29L.S. Pierson Introduction to Tree of Life; The Pseudomonads in Biological

Goals of course

1. Introduce diversity of prokaryotes, eukaryotes, and viruses.

2. Discuss microbial phylogeny/taxonomy.

3. Expose students to wide range of research at The University of Arizona.

Page 9: Microbial Diversity: (PLP329). General Topic: Prokaryotic Microbes August 29L.S. Pierson Introduction to Tree of Life; The Pseudomonads in Biological