laccase3-based extracellular domain provides possible ...jun 18, 2020  · the endodermis (2)....

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Laccase3-based extracellular domain provides possible positional information for directing Casparian strip formation in Arabidopsis Yan Zhuang a,b , Daqing Zuo a , Yihan Tao a , Huaqing Cai c,1 , and Lei Li a,b,1 a State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences and School of Advanced Agricultural Sciences, Peking University, 100871 Beijing, China; b Peking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Peking University, 100871 Beijing, China; and c National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, 100101 Beijing, China Edited by Philip N. Benfey, Duke University, Durham, NC, and approved May 28, 2020 (received for review April 5, 2020) The Casparian strip (CS) is a tight junction-like structure formed by lignin impregnation on the walls of endodermal cells in plant roots. The CS membrane domain (CSD M ), demarked by the CASP proteins, is important for orienting lignification enzymes. Here, we report that an endodermis-expressed multicopper oxidase, LACCASE3 (LAC3) in Arabidopsis, locates to the interface between lignin do- mains and the cell wall during early CS development prior to CASP1 localizing to CSD M and eventually flanks the mature CS. Pharmaco- logical perturbation of LAC3 causes dispersed localization of CASP1 and compensatory ectopic lignification. These results support the existence of a LAC3-based CS wall domain which coordinates with CSD M to provide bidirectional positional information that guides precise CS lignification. Casparian strip | laccase | lignin | positional information | copper T ight junctions blocking ion flux, pathogen entry, and protein movement through the paracellular pathway are a conserved feature of multicellular organisms (1). In higher plants, the Cas- parian strip (CS) is a crucial apoplastic diffusion barrier built by the endodermis (2). Unlike junctions of animal cells that are formed by simultaneously pulling together and sealing off adjacent cytoplasmic membranes with large protein complexes, the exis- tence of a primary wall surrounding plant cells has rendered two fundamental features in CS formation. First, CS sealing is con- trolled by precise spatial information, resulting in a ring-like structure aligning the anticlinal and transversal cell walls (3). Second, in plants such as Arabidopsis, CS is primarily sealed with lignin, a phenylpropanoid polymer that deposits in the primary cell wall to span the predefined extracellular space between neigh- boring cells (4). Part of the spatial information is encoded by CASPs, which demark the CS membrane domain (CSD M ), a specialized membrane region excluding most proteins and lipid dyes (5, 6). CSD M is thought to form a scaffold for recruiting and spatially restricting lignification enzymes such as PER64 (7), which is under surveillance by a peptide signaling pathway that comprises the ligands CIF1/CIF2, the leucine-rich repeat receptor kinase SGN3, and the polarly localized kinase SGN1 (811). Because lignin deposition takes place in the primary wall, we speculate there may exist a CS wall domain (CSD W ) which coordinates with CSD M and the CIF-SGN3 module to provide bidirectional posi- tional information for accurate CS lignification. Laccases are secretory multicopper oxidases involved in lignin polymerization (12). Gene expression profiling of root subzones (13) reveals that transcript of LAC3, among the 17 laccase- encoding genes in Arabidopsis, preferentially accumulates in endodermal cells. Using the proLAC3::LAC3-eGFP transgenic line that expresses LAC3-eGFP driven by the native promoter, we observed that LAC3 is expressed in endodermis and remains secretory between 4.5 ± 1.5 and 17.5 ± 2.5 cells after onset of cell elongation (Fig. 1A and Movies S1 and S2), which temporally spans CS development (57). At the subcellular level, CS lignification initiates in a string-of-pearls pattern, after which the discrete lignin domains fuse to form a completely sealed ring-like structure (6). LAC3 initially surrounds nascently formed lignin pearlsand accumulates between two adjacent pearlswhere new lignin would deposit (Fig. 1B). As the lignin domains expand, LAC3 signals are pushed outward and gradually localize to the borders of fused CS regions (Fig. 1 C and E). Eventually, LAC3 locates to the borders flanking the continuous lignin band (Fig. 1 D and F and Movie S3). Thus, LAC3 participates in a dynamic CSD W at the interface between the primary cell wall and deposited lignin during CS formation. In the proLAC3::LAC3-eGFP proCASP1::CASP1-mRuby3 dual reporter line, LAC3 accumulates in between two adjacent CASP1 domains (Fig. 1G and Movie S4). These original LAC3- positive but CASP1-negative sites are later marked by CASP1, as the CASP1 domains further fuse and push LAC3 toward the borders (Movie S4). After the CASP1 domains are continu- ously fused, LAC3 colocalizes with CASP1 on the CS borders (Fig. 1H). In the proLAC3::LAC3-eGFP proPER64::PER64- mCherry reporter line, LAC3 and PER64 display an in- terspersed spatial relationship in early endodermis similar to LAC3 and CASP1 (Fig. 1I). These observations indicate that LAC3-based CSD W and CASP1-defined CSD M are spatially separated yet coordinated in CS development. Laccases are genetically redundant glycosylated cuproenzymes (14). We utilized the copper chelator bathocuproinedisulfonic acid and the N-glycosylation inhibitor tunicamycin to assess the poten- tial effects of compromising LAC3 and related laccases. Upon copper chelation, the continuous CS becomes dispersed, compen- satory lignification is activated at the cortex-facing side (Fig. 2 A and B), and the function of CS as a diffusion barrier is breached (Fig. 2C). Ectopic lignification induced by copper chelation is specifically blocked in sgn3 (Fig. 2 A and B), suggesting that copper is required for the establishment of a functional CS and prevention of SGN3-mediated compensatory lignification. Upon copper che- lation, LAC3 signals continuously aligning the CS borders become discrete and form locally concentrated patches while CASP1 lo- calization, which demarks the CSD M , loses clear borders and becomes more diffused, similar to the dispersed lignin deposition (Fig. 2 DI). These effects were recapitulated by tunicamycin Author contributions: Y.Z. and L.L. designed research; Y.Z., D.Z., and Y.T. performed re- search; Y.Z. contributed new reagents/analytic tools; Y.Z., H.C., and L.L. analyzed data; and Y.Z. and L.L. wrote the paper. The authors declare no competing interest. This open access article is distributed under Creative Commons Attribution-NonCommercial- NoDerivatives License 4.0 (CC BY-NC-ND). 1 To whom correspondence may be addressed. Email: [email protected] or lei.li@pku. edu.cn. This article contains supporting information online at https://www.pnas.org/lookup/suppl/ doi:10.1073/pnas.2005429117/-/DCSupplemental. www.pnas.org/cgi/doi/10.1073/pnas.2005429117 PNAS Latest Articles | 1 of 3 PLANT BIOLOGY BRIEF REPORT Downloaded by guest on April 22, 2021

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Page 1: Laccase3-based extracellular domain provides possible ...Jun 18, 2020  · the endodermis (2). Unlike junctions of animal cells that are formed by simultaneously pulling together and

Laccase3-based extracellular domain provides possiblepositional information for directing Casparian stripformation in ArabidopsisYan Zhuanga,b

, Daqing Zuoa, Yihan Taoa, Huaqing Caic,1, and Lei Lia,b,1

aState Key Laboratory of Protein and Plant Gene Research, School of Life Sciences and School of Advanced Agricultural Sciences, Peking University, 100871Beijing, China; bPeking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Peking University, 100871 Beijing, China;and cNational Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences,100101 Beijing, China

Edited by Philip N. Benfey, Duke University, Durham, NC, and approved May 28, 2020 (received for review April 5, 2020)

The Casparian strip (CS) is a tight junction-like structure formed bylignin impregnation on the walls of endodermal cells in plant roots.The CS membrane domain (CSDM), demarked by the CASP proteins,is important for orienting lignification enzymes. Here, we reportthat an endodermis-expressed multicopper oxidase, LACCASE3(LAC3) in Arabidopsis, locates to the interface between lignin do-mains and the cell wall during early CS development prior to CASP1localizing to CSDM and eventually flanks the mature CS. Pharmaco-logical perturbation of LAC3 causes dispersed localization of CASP1and compensatory ectopic lignification. These results support theexistence of a LAC3-based CS wall domain which coordinates withCSDM to provide bidirectional positional information that guidesprecise CS lignification.

Casparian strip | laccase | lignin | positional information | copper

Tight junctions blocking ion flux, pathogen entry, and proteinmovement through the paracellular pathway are a conserved

feature of multicellular organisms (1). In higher plants, the Cas-parian strip (CS) is a crucial apoplastic diffusion barrier built bythe endodermis (2). Unlike junctions of animal cells that areformed by simultaneously pulling together and sealing off adjacentcytoplasmic membranes with large protein complexes, the exis-tence of a primary wall surrounding plant cells has rendered twofundamental features in CS formation. First, CS sealing is con-trolled by precise spatial information, resulting in a ring-likestructure aligning the anticlinal and transversal cell walls (3).Second, in plants such as Arabidopsis, CS is primarily sealed withlignin, a phenylpropanoid polymer that deposits in the primary cellwall to span the predefined extracellular space between neigh-boring cells (4). Part of the spatial information is encoded byCASPs, which demark the CS membrane domain (CSDM), aspecialized membrane region excluding most proteins and lipiddyes (5, 6). CSDM is thought to form a scaffold for recruiting andspatially restricting lignification enzymes such as PER64 (7), whichis under surveillance by a peptide signaling pathway that comprisesthe ligands CIF1/CIF2, the leucine-rich repeat receptor kinaseSGN3, and the polarly localized kinase SGN1 (8–11). Becauselignin deposition takes place in the primary wall, we speculatethere may exist a CS wall domain (CSDW) which coordinates withCSDM and the CIF-SGN3 module to provide bidirectional posi-tional information for accurate CS lignification.Laccases are secretory multicopper oxidases involved in lignin

polymerization (12). Gene expression profiling of root subzones(13) reveals that transcript of LAC3, among the 17 laccase-encoding genes in Arabidopsis, preferentially accumulates inendodermal cells. Using the proLAC3::LAC3-eGFP transgenicline that expresses LAC3-eGFP driven by the native promoter,we observed that LAC3 is expressed in endodermis and remainssecretory between 4.5 ± 1.5 and 17.5 ± 2.5 cells after onset of cellelongation (Fig. 1A and Movies S1 and S2), which temporallyspans CS development (5–7). At the subcellular level, CS

lignification initiates in a string-of-pearls pattern, after which thediscrete lignin domains fuse to form a completely sealed ring-likestructure (6). LAC3 initially surrounds nascently formed lignin“pearls” and accumulates between two adjacent “pearls” wherenew lignin would deposit (Fig. 1B). As the lignin domains expand,LAC3 signals are pushed outward and gradually localize to theborders of fused CS regions (Fig. 1 C and E). Eventually, LAC3locates to the borders flanking the continuous lignin band (Fig. 1 Dand F andMovie S3). Thus, LAC3 participates in a dynamic CSDW

at the interface between the primary cell wall and deposited ligninduring CS formation.In the proLAC3::LAC3-eGFP proCASP1::CASP1-mRuby3

dual reporter line, LAC3 accumulates in between two adjacentCASP1 domains (Fig. 1G and Movie S4). These original LAC3-positive but CASP1-negative sites are later marked by CASP1,as the CASP1 domains further fuse and push LAC3 toward theborders (Movie S4). After the CASP1 domains are continu-ously fused, LAC3 colocalizes with CASP1 on the CS borders(Fig. 1H). In the proLAC3::LAC3-eGFP proPER64::PER64-mCherry reporter line, LAC3 and PER64 display an in-terspersed spatial relationship in early endodermis similar toLAC3 and CASP1 (Fig. 1I). These observations indicate thatLAC3-based CSDW and CASP1-defined CSDM are spatiallyseparated yet coordinated in CS development.Laccases are genetically redundant glycosylated cuproenzymes

(14). We utilized the copper chelator bathocuproinedisulfonic acidand the N-glycosylation inhibitor tunicamycin to assess the poten-tial effects of compromising LAC3 and related laccases. Uponcopper chelation, the continuous CS becomes dispersed, compen-satory lignification is activated at the cortex-facing side (Fig. 2 Aand B), and the function of CS as a diffusion barrier is breached(Fig. 2C). Ectopic lignification induced by copper chelation isspecifically blocked in sgn3 (Fig. 2 A and B), suggesting that copperis required for the establishment of a functional CS and preventionof SGN3-mediated compensatory lignification. Upon copper che-lation, LAC3 signals continuously aligning the CS borders becomediscrete and form locally concentrated patches while CASP1 lo-calization, which demarks the CSDM, loses clear borders andbecomes more diffused, similar to the dispersed lignin deposition(Fig. 2 D–I). These effects were recapitulated by tunicamycin

Author contributions: Y.Z. and L.L. designed research; Y.Z., D.Z., and Y.T. performed re-search; Y.Z. contributed new reagents/analytic tools; Y.Z., H.C., and L.L. analyzed data;and Y.Z. and L.L. wrote the paper.

The authors declare no competing interest.

This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND).1To whom correspondence may be addressed. Email: [email protected] or [email protected].

This article contains supporting information online at https://www.pnas.org/lookup/suppl/doi:10.1073/pnas.2005429117/-/DCSupplemental.

www.pnas.org/cgi/doi/10.1073/pnas.2005429117 PNAS Latest Articles | 1 of 3

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treatment (Fig. 2 J–L). Although neither bathocuproinedisulfonicacid nor tunicamycin is specific for laccases, commonality of thetwo treatments on LAC3 and CASP1 localization suggests thatLAC3-based CSDW focalizes CSDM to provide positional infor-mation guiding CS lignification.

Materials and MethodsPlant Materials. The sgn1-2 and sgn3-3 mutants were respectively Salk_055095and Salk_043282. Primers CCAAGCTTGCATGCCTGCAGCTTCTTGTGTGCAGGAGCT and GTACCCGGGGATCCTCTAGAGCATCTTGGAAGATCCAATG were usedto clone a 4,090-bp genomic region into pCambia1300-native-eGFP for gen-erating proLAC3::LAC3-eGFP. Primers CCAAGCTTGCATGCCTGCAGTGAGAATTGGCGATTAAAGA and GTACCCGGGGATCCTCTAGAATGCCTCTTGAGGGCGATGG were used to clone a 2,954-bp genomic region into pCambia

1300-native-mRuby3 for generating proCASP1::CASP1-mRuby3. The proP-ER64::PER64-mCherry line was as previously described (7). The dual reporterlines were generated by crossing.

Pharmacological Treatments.A copper dropout 1/2Murashige and Skoog (MS)medium was supplemented with 1 μM CuSO4 as control and 50 μM disodiumsalt of bathocuproinedisulfonic acid (Sigma) for copper chelation. Tunica-mycin (Pharmabiology) was added to the 1/2 MS medium at a final con-centration of 0.05 μg/mL.

CS Assays. Basic fuchsin, auramine O, and calcofluor white staining assayswere performed on 5-d-old seedlings using the previously described ClearSeeprotocol (15). Propidium iodide penetration assay was performed as de-scribed (5). Confocal images were acquired by an LSM 800 microscope

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Fig. 1. Surface view of LAC3 localization during CS development. (A) Radial section of a proLAC3::LAC3-eGFP root showing LAC3-eGFP (green) in relation tolignin (basic fuchsin, magenta) and the cell wall (calcofluor white, blue). co, cortex; en, endodermis; st, stele. (B–D) Localization of LAC3-eGFP (green) at thestring-of-pearls (B), transition (C), and mature (D) stage of CS development in relation to lignin. (E and F) Quantification of relative LAC3-eGFP and basicfuchsin fluorescence intensity in C and D. (G and H) Localization of LAC3-eGFP (green) and CASP1-mRuby3 (magenta) at the string-of-pearls (G) and mature(H) stage in the dual reporter line. (I) Localization of LAC3-eGFP (green) and PER64-mCherry (magenta) at the string-of-pearls stage in the dual reporter line.(Scale bars, 5 μm.)

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equipped with Airyscan (Zeiss). The original images were processed usingZeiss ZEN software and ImageJ.

Data Availability. All of the data in this study are included in the paper orMovies S1–S4.

ACKNOWLEDGMENTS. We thank Drs. N. Geldner, A. L. Samuels, andQ. Zhao for providing genetic materials. This work was supported bygrants from the National Key Research and Development Program ofChina (2017YFA0503800) and the National Natural Science Foundation ofChina (31621001).

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2. G. Nagahashi, W. W. Thomson, R. T. Leonard, The Casparian strip as a barrier to themovement of lanthanum in corn roots. Science 183, 670–671 (1974).

3. N. Geldner, The endodermis. Annu. Rev. Plant Biol. 64, 531–558 (2013).4. S. Naseer et al., Casparian strip diffusion barrier in Arabidopsis is made of a

lignin polymer without suberin. Proc. Natl. Acad. Sci. U.S.A. 109, 10101–10106(2012).

5. J. Alassimone, S. Naseer, N. Geldner, A developmental framework for endodermaldifferentiation and polarity. Proc. Natl. Acad. Sci. U.S.A. 107, 5214–5219 (2010).

6. D. Roppolo et al., A novel protein family mediates Casparian strip formation in theendodermis. Nature 473, 380–383 (2011).

7. Y. Lee, M. C. Rubio, J. Alassimone, N. Geldner, A mechanism for localized lignin de-position in the endodermis. Cell 153, 402–412 (2013).

8. T. Nakayama et al., A peptide hormone required for Casparian strip diffusion barrierformation in Arabidopsis roots. Science 355, 284–286 (2017).

9. V. G. Doblas et al., Root diffusion barrier control by a vasculature-derived peptidebinding to the SGN3 receptor. Science 355, 280–284 (2017).

10. A. Pfister et al., A receptor-like kinase mutant with absent endodermal diffusionbarrier displays selective nutrient homeostasis defects. eLife 3, e03115 (2014).

11. J. Alassimone et al., Polarly localized kinase SGN1 is required for Casparian strip in-tegrity and positioning. Nat. Plants 2, 16113 (2016).

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14. P. V. Turlapati, K. W. Kim, L. B. Davin, N. G. Lewis, The laccase multigene family inArabidopsis thaliana: Towards addressing the mystery of their gene function(s).Planta 233, 439–470 (2011).

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