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Page 1: T A C G T A GA GT G T C T A T G A AT C GA C T 3 1.00e-010 ...thebrain.bwh.harvard.edu/GBMF/MotifsPassBlockFilterNovel/Tcells-n… · M o t i f G r o u p S p e c i f i c i t y G r

Mot

if

Gro

up S

peci

ficity

Gro

up S

peci

ficity

Ran

k

Site

Spe

cific

ity

Site

Spe

cific

y R

ank

Test

set S

ites

Aver

age

Test

set S

ites

StD

ev T

ests

et S

ites

TRA

NSF

AC

Cor

rela

tion

TRA

NSF

AC

ID

Mot

if Fi

nder

s

Sets

Rep

eats

Logo

1 4.40e-011 1 3.90e-011 1 7 1.40 1.10 AA, BP, ME 1, 2, 3, 5 PAL TGA

GCTT

ATCGG

TTAC

CA

GA

TCA

GCAT

AACA

CAT

GACG

AAGT

TGA

ATCA

GTG

TGA

TGAA

GACG G

A

2 4.40e-011 1 3.90e-011 1 6 1.20 1.10 AA 1, 2, 3, 4, 5 AT

ACT A ACGTA

CT

AGC

CT

AGTC

T T A ACG

GTAA

CCTA G

ACT

TAC

TAC C

GA AG

3 1.00e-010 3 5.30e-011 1 4 0.80 0.84 AA 1, 3, 4 PAL ATT CA

TGA

TAATCT

ACTGCATAGCT

AGCA

TGCT

GCAAGA

TGAAT

GAAGCTACAC

ATAC

GA TAGG

TCG G

TCAG

AG4 1.00e-010 3 5.80e-011 1 3 0.60 0.55 AA 2, 4 PAL A

TTCA

CTC AG

CCA

CT TT

GT TCG AT

AG AA5 1.00e-010 3 5.60e-011 2 4 0.80 0.84 AA 5 PAL TT

CCATA

GCATCAGCAGT

A CA

TGATAGA

TTACG

TATTAT

G TCGAT

GAG

AATGCAGC

GTGAACA

GAACT

6 1.00e-009 6 5.90e-010 5 3 0.60 0.55 AA 1, 2, 3, 4, 5 PAL AAT

TA

ACAAA C

T TGC

GA

TAGG

A AA7 1.00e-009 6 5.40e-010 2 5 1.00 1.00 AA 1, 2, 3 TR C

AGATCTGG

T A GATCAGT TA

GCATCAGCTGG

TTACC

AATGATG

CAAGA

TGAAG

ACATACA

GGAATGTACT

CAT

GTG

GT

8 2.00e-009 9 1.10e-009 2 5 1.00 1.00 AA 1, 2, 3 TR TA

CGAG

CAT

ACT

TACC

ATA

GA

GCAG

AGCA

GTA A

TGATG AT

AGA

TA

TAG

CAGC

A

9 5.60e-009 10 3.10e-009 6 6 1.20 1.30 AA 1, 3, 4 TR AT

AT

ACAA

TTA

GCAT

A AT

TA

ATC

ACG

TGA

TAGA

TCG

AGTT

AGAAA

TGT

ACAGA

CGTA A

10 8.50e-009 11 4.70e-009 8 5 1.00 1.00 AA 1, 2, 4 PAL CT

TA

AT

AG

TA

AGT

AGCA

GATA

GTA

GAT G

AT TACA T

GAA

GTA

AT

GCAG

ATGAT

A

11 1.10e-008 13 1.10e-008 6 6 1.20 0.84 AA, BP, MD, ME 1, 2, 3, 4, 5 TGAC

ACA

TACAG

CAT

ACGTA

CCTAT

AGT

TGA

GGT

AG

TA

GA

12 1.20e-008 14 6.60e-009 5 5 1.00 1.00 AA 3 PAL AAGCA

T CAAA

GT G

AGCA

ACT

CGAAG

AAGC

TGA

CGT G

TCG

GT

GTCA

TAGAA

TG

TGA

CGAT

AAGC

TGAC

T

13 1.20e-008 14 6.90e-009 6 4 0.80 0.84 AA 1, 2, 3, 4, 5 TATAGCATGATA

TAATGC

GA ATGTAG

CTAGG

CTAC

ATCA

ATGG

AAG

CAT

A ATA

TC

14 1.70e-008 16 9.90e-009 5 6 1.20 1.30 AA, BP, MD, ME 5 GAAT

AG

CAGG

AATGG

AATGG

CTA

GT TG

AGT

TA

GA

TGA

TCG

GA

15 3.80e-008 20 3.70e-008 9 6 1.20 1.10 AA, BP 1, 2, 3, 4, 5 TCGATCA G

ACT

TAG

TCG

GT T

ACA

GTAA

GTA

CG

TGA

CA

16 4.60e-008 21 2.80e-008 7 5 1.00 1.00 AA 2, 3, 5 PAL GT

TGA

TAGACTT

CGC

TTCA G

AAT

GA

GCT

ATG A

17 6.80e-008 23 3.70e-008 9 4 0.80 0.84 AA 1, 3, 5 PAL,TR CA

AT

GT

AGCC

ATAT

ATA

ATC

TCAT

ATAC

CTAG

CTA

CT

TA

CT

ATG

ATG G

AGA

CGAA

G GA

GCAAA

GCC

ACA

18 8.20e-008 24 4.80e-008 9 6 1.20 1.10 AA 2, 3, 4, 5 TAG

AG

CA

AGC

ATGG

TATCC

AATAAC

A TA

GCAC

AAT

TA

19 1.10e-007 27 6.90e-008 10 4 0.80 0.84 AA, BP, MD, ME 1, 2, 3, 4 ACTGA

GCC

ATATGC

TATGG

TTGTAC

TCG

TCAATA

GTG

20 1.80e-007 28 1.00e-007 11 7 1.40 1.50 AA 2, 4 PAL AT

GCT

AGCTA

TC

TA

AT

CGAC

AA GA

TCA

GA

AGCT A

TTCA

ATGGG

TA

CAG

GTA

21 2.00e-007 29 1.20e-007 12 5 1.00 1.20 AA 5 PAL ACGAA

TGA A

CAC

TAG

CGA

CTG

TGCTG

CAAGG

C

22 2.30e-007 30 2.10e-007 14 8 1.60 1.30 AA 3, 4 PAL GCA

CTA

TAC

TA

ATG

TAC

CGA

TCA

ACTCTGAT

ACTA

AGCG

AACGT

ATG

GAT

CG

CTG T

AAGC

A

23 2.90e-007 31 1.80e-007 13 5 1.00 1.20 AA, BP 1 CG

AGC

AATGT

CAG

ATGT

CATTT

CGA

TAGCA

T T24 2.90e-007 31 2.80e-007 13 6 1.20 1.10 BP 1, 2, 3, 4, 5 T

GCGTGA

CTGTGA

CGAA

GACT

AGT

AGT

TCGA

TTGCC

TGTCC

T

25 3.30e-007 33 1.80e-007 11 6 1.20 1.10 AA 3 AT

CTA

TAG

CTA

TAC

TCA T

ATCATGCATGCA AG

CT

ACT

ATGG

TCT

GA

GATGG

AGA

AG

TA

ACG

CAG

CAT T

26 4.30e-007 34 4.10e-007 13 5 1.00 0.71 AA, BP 1, 2, 3, 4, 5 TAGA

TGA

TAC

GTAGA

TTGCAA

CTG

ATA

CATC

TATCC

ATA

27 7.20e-007 37 4.10e-007 16 8 1.60 1.70 AA 2, 3, 4, 5 TA AG

TA

GA A T

CA

CAT

GTA G

ATG

TA

TAGG

TGAAC

GGA

28 8.40e-007 38 4.80e-007 15 4 0.80 0.84 AA 3 PAL,TR ACA

CA

ATCT

ATAGTA

CG

ACT

CGT

ATG

AGT A

GAGAAT

AG

TGA

TCA A

TAG

TA

29 9.10e-007 39 8.90e-007 18 5 1.00 0.71 AA, BP, ME 1, 2, 3, 4, 5 CT

GCA

CTTG

AGAT

AGG

ACGTT

GACGT

30 2.70e-006 41 2.40e-006 21 10 2.00 1.40 AA 4, 5 PAL TGA C

AGCTA T

ACC

AACTG

TTG

GTAA

GTAG

AGA

CGAA

GGAC

TA A

T

31 4.60e-006 44 2.40e-006 24 7 1.40 1.30 AA 3 TA

TCA

TGA

GTA

TGCA C

TCAT

GCTC

GGATA

GGAG

ATGG

A A TA

AGT C

AAT

TCA

CA

32 5.70e-006 45 3.30e-006 16 6 1.20 1.30 AA, BP 1, 5 TA

CTG

ACGTC

AGA A

GTA

GAT

CG

TA

CA

TCAA

TCAT AT

ACT

A

33 6.20e-006 46 5.70e-006 22 6 1.20 0.84 BP 4 PAL TA

TAG

AGC

TAC

TTGA

CAT

TAG

TGC T

ACA

GTAT

GCGAT

GCAGT

A

34 1.90e-005 49 1.00e-005 28 4 0.80 1.10 AA 3 TCG

TAT

GGTGATAGG

AAC

GAGAG

CTA

ACT

ACTTC

TAG

35 2.80e-005 51 2.50e-005 23 9 1.80 1.50 AA, BP 2, 3, 5 PAL,TR GAC

ACT

GCAT

CATGTAG

TCGAGTA

TGC

GTAT

GAGCA G

ATA

TA

GCTAC

ATA

CG

CA

36 3.60e-005 53 2.10e-005 30 5 1.00 1.20 BP 3 TR ACT

GTG

TATGA

TAGT

CGTG

ACT

ATG

CAT T

GTA

CA

GA

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