Disease Systems Biology

Lars Juhl Jensen

signaling networks

proteomics

NetPhorest & NetworKIN

Miller, Jensen et al., Science Signaling, 2008

Linding, Jensen, Ostheimer et al., Cell, 2007

other modifications

association networks

STRING & STITCH

Kuhn et al., Nucleic Acids Research, 2010

data integration

Korbel et al., Nature Biotechnology, 2004

Jensen & Bork, Science, 2008

Letunic & Bork, Trends in Biochemical Sciences, 2008

more entity types

text mining

>10 km

Reflect

augmented browsing

Pafilis, O’Donoghue, Jensen et al., Nature Biotechnology, 2009

association mining

web services

patient records

text and registry data

drugs

side effects

diseases

patient trajectories

patient stratification

genotype vs. phenotype

ReflectSune Frankild

Heiko Horn

Evangelos Pafilis

Michael Kuhn

Reinhardt Schneider

Sean O’Donoghue

Patient recordsFrancisco Roque

Peter Bjødstrup Jensen

Henriette Schmock

Marlene Dalgaard

Massimo Andreatta

Thomas Hansen

Karen Søeby

Søren Bredkjær

Anders Juul

Thomas Werge

Søren Brunak

STRING & STITCHDamian Szklarczyk

Andrea Franceschini

Michael Kuhn

Milan Simonovic

Alexander Roth

Pablo Minguez

Tobias Doerks

Jean Muller

Manuel Stark

Samuel Chaffron

Chris Creevey

Philippe Julien

Jan Korbel

Berend Snel

Martijn Huynen

Christian von Mering

Peer Bork

NetPhorest & NetworKINRune Linding

Heiko Horn

Martin Lee Miller

Gerard Ostheimer

Francesca Diella

Claus Jørgensen

Karen Colwill

Jing Jin

Pavel Metalnikov

Vivian Nguyen

Adrian Pasculescu

Marina Olhovsky

Michele Tinti

Lei Li

Marilyn Hsiung

Sirlester Parker

Jennifer Bordeaux

Thomas Sicheritz-

Pontén

Jes Alexander

Jin Gyoon Park

Stefan Knapp

Nikolaj Blom

Leona D. Samson

Rob Russell

Peer Bork

Shawn Li

Gianni Cesareni

Benjamin Turk

Søren Brunak

Michael Yaffe

Tony Pawson

”we” are many people