differences in the wheat leaf 2-de protein profile between cultivars and applied nitrogen levels

1
Abstracts / Current Opinion in Biotechnology 22S (2011) S15–S152 S131 P3 Past, present and future of tissue culture and genetic transformation research on cowpea (Vigna unguiculata L.) Muhammad Aasim 1 , Allah Bakhsh 2 , Khalid Mehmood Khawar 2 , Sebahattin Ozcan 2 1 Department of Biology, Faculty of Science, Karamanoglu Mehmetbey University, Karaman, Turkey 2 Department of Field Crops, Faculty of Agriculture, Ankara University, Ankara, Turkey E-mail address: [email protected] (M. Aasim) Cowpea (Vigna unguiculata L.) is one of the most important drought-tolerant summer food legume crop largely cultivated on tens of millions of small farms in the drier zones of Africa with limited yield due to various biotic and abiotic stresses. It is also grown in some Asian, South European, Central and South Ameri- can countries both as food and forage crops. Cowpea can play an important role in supplementing rural population diet due to its low cost high protein, high calories, minerals and vitamins. World demand for legume feed protein is increasing gradually due to increasing demand for animal food products. Therefore, there is a dire need to develop new varieties combining traditional and mod- ern biotechnological techniques to meet these future challenges. Reports concerning micropropagation and tissue culture studies of cowpea started during early 1980s with moderate success in 1990s owing to recalcitrant nature of plant. However, during 2000s many researchers developed new protocols to overcome the problem of recalcitrance and consequently micropropagation. This report reviews past and present tissue culture and genetic transformation research on cowpea and also focus on future prospects of cowpea research using modern biotechnological techniques. doi:10.1016/j.copbio.2011.05.427 P4 Developments in pistachio biotechnology Engin Tilkat 1 , Ahmet Onay 2 , Yelda Ozden 3 , Hakan Yildirim 4 , Emine Ayaz Tilkat 1 1 Department of Biology, Faculty of Science and Literature, University of Batman, Batman, Turkey 2 Department of Biology, Faculty of Science, University of Dicle, Diyarbakir, Turkey 3 Department of Molecular Biology and Genetics, Gebze Institute of Technology, Kocaeli, Turkey 4 Department of Horticulture, Faculty of Agriculture, University of Dicle, Diyarbakir, Turkey E-mail address: [email protected] (E. Tilkat) This study provides information on different stages of pistachio micropropagation as a tool in plant biotechnology. Pistachio is an important plantation crop grown in at least 19 countries across the globe. In recent years, the pistachio has received a lot of attention in the biotechnology research area. For the last three decades, there has been a steady flow of information on pistachio biotechnology research and now it is entering a new era. Regarding micropropa- gation, pistachio plants have been extremely difficult to establish due to a host of difficulties such as the high incidence of contamina- tion and the oxidation of phenolic compounds. The content of this study is concerned with new methods developed for the different stages of micropropagation of pistachio: (1) installation of mature apical shoot tips and elimination of browning exudates; (2) forc- ing hardwood shoots; (3) forcing axenic leaves; (4) initiation of embryogenic masses (EMS); (5) encapsulation of somatic embryos and axillary buds for storage; (6) the facilitation of rooting; and (7) application of molecular markers for the determination of genetic diversity. With these improved stages, the application of pistachio micropropagation in commercial clonal orchards is feasibility in near future as an alternative to traditional propagation. doi:10.1016/j.copbio.2011.05.428 P5 Differences in the Wheat leaf 2-DE protein profile between cultivars and applied nitrogen levels Khalid Hakeem 1 , Muhammad Iqbal 1 , Munir Ozturk 2 , Mehmet Serdal Sakcali 3 1 Hamdard University, Karachi, Pakistan 2 Ege University, Izmir, Turkey 3 Fatih University, Istanbul, Turkey E-mail address: [email protected] (M.S. Sakcali) Very little information is available on the proteome changes occurring in response to nitrogen amount. In this study two dimensional electrophoresis was used to investigate proteome differences between two contrasting cultivars of wheat (Triticum aestivum) and the changes caused by nitrogen nutrition deficit in the leaf tissue. Some physiological features, such as N-uptake kinetics and activities of N-assimilation enzymes as well as protein content were measured previous to the proteomic analysis. Statis- tical analysis identified 152 differential protein spots in the selected pair wise comparisons of experimental conditions and correlated with the expression cluster revealed by the PD Quest analysis. The 18 protein spots showing substantial difference in their expression were subjected to matrix-assisted laser desorption ionization time of flight to deduce their possible functions. Many of these changes referred to enzymes involved in different pathways implicated in the balance of the energy, and redox status of the cell. Gene expres- sion analysis of these different proteins by quantitative real time PCR showed that the mRNA level was correlated well with the pro- tein level. This work provides an insight on the characterization of proteome changes that occur in response to nitrogen deficiency in crop plants. doi:10.1016/j.copbio.2011.05.429 P6 Germination and growth patterns of sugarbeet (Beta vul- garis L.) lines and cultivars at different ploidy levels Mustafa Yildiz, Nazif Korkmaz, Serap Kurumlu, Burak Onol, Cansu Telci Department of Field Crops, Faculty of Agriculture, University of Ankara, Ankara, Turkey E-mail address: [email protected] (S. Kurumlu) There are differences between diploid and polyploid plants from morphological, physiological and biochemical aspects. In this research, the germination and growth patterns of sugarbeet geno- types at different ploidy levels were evaluated. Two diploid (Felicita and Agnessa) and two tetraploid (CBM 315 and AD 440) sugar- beet genotypes were grown in boxes (50 × 25 cm) for 6 months. During the study, morphological, analytical and cytological char-

Upload: khalid-hakeem

Post on 26-Jun-2016

214 views

Category:

Documents


1 download

TRANSCRIPT

Biotec

P

PtL

MS

1

U2

A

E

dtlgcildideRcororrr

d

P

D

EE

1

o2

D3

T4

D

E

migihrgdtss

aieaadmn

d

P

Db

KS

1

2

3

E

oddaikctpw1wortsPtpc

d

P

Gg

MT

A

E

fr

Abstracts / Current Opinion in

3

ast, present and future of tissue culture and geneticransformation research on cowpea (Vigna unguiculata.)

uhammad Aasim 1, Allah Bakhsh 2, Khalid Mehmood Khawar 2,ebahattin Ozcan 2

Department of Biology, Faculty of Science, Karamanoglu Mehmetbeyniversity, Karaman, TurkeyDepartment of Field Crops, Faculty of Agriculture, Ankara University,nkara, Turkey

-mail address: [email protected] (M. Aasim)

Cowpea (Vigna unguiculata L.) is one of the most importantrought-tolerant summer food legume crop largely cultivated onens of millions of small farms in the drier zones of Africa withimited yield due to various biotic and abiotic stresses. It is alsorown in some Asian, South European, Central and South Ameri-an countries both as food and forage crops. Cowpea can play anmportant role in supplementing rural population diet due to itsow cost high protein, high calories, minerals and vitamins. Worldemand for legume feed protein is increasing gradually due to

ncreasing demand for animal food products. Therefore, there is aire need to develop new varieties combining traditional and mod-rn biotechnological techniques to meet these future challenges.eports concerning micropropagation and tissue culture studies ofowpea started during early 1980s with moderate success in 1990swing to recalcitrant nature of plant. However, during 2000s manyesearchers developed new protocols to overcome the problemf recalcitrance and consequently micropropagation. This reporteviews past and present tissue culture and genetic transformationesearch on cowpea and also focus on future prospects of cowpeaesearch using modern biotechnological techniques.

oi:10.1016/j.copbio.2011.05.427

4

evelopments in pistachio biotechnology

ngin Tilkat 1, Ahmet Onay 2, Yelda Ozden 3, Hakan Yildirim 4,mine Ayaz Tilkat 1

Department of Biology, Faculty of Science and Literature, Universityf Batman, Batman, TurkeyDepartment of Biology, Faculty of Science, University of Dicle,iyarbakir, TurkeyDepartment of Molecular Biology and Genetics, Gebze Institute ofechnology, Kocaeli, TurkeyDepartment of Horticulture, Faculty of Agriculture, University oficle, Diyarbakir, Turkey

-mail address: [email protected] (E. Tilkat)

This study provides information on different stages of pistachioicropropagation as a tool in plant biotechnology. Pistachio is an

mportant plantation crop grown in at least 19 countries across thelobe. In recent years, the pistachio has received a lot of attentionn the biotechnology research area. For the last three decades, thereas been a steady flow of information on pistachio biotechnologyesearch and now it is entering a new era. Regarding micropropa-ation, pistachio plants have been extremely difficult to establish

ue to a host of difficulties such as the high incidence of contamina-ion and the oxidation of phenolic compounds. The content of thistudy is concerned with new methods developed for the differenttages of micropropagation of pistachio: (1) installation of mature

tabD

hnology 22S (2011) S15–S152 S131

pical shoot tips and elimination of browning exudates; (2) forc-ng hardwood shoots; (3) forcing axenic leaves; (4) initiation ofmbryogenic masses (EMS); (5) encapsulation of somatic embryosnd axillary buds for storage; (6) the facilitation of rooting; and (7)pplication of molecular markers for the determination of geneticiversity. With these improved stages, the application of pistachioicropropagation in commercial clonal orchards is feasibility in

ear future as an alternative to traditional propagation.

oi:10.1016/j.copbio.2011.05.428

5

ifferences in the Wheat leaf 2-DE protein profileetween cultivars and applied nitrogen levels

halid Hakeem 1, Muhammad Iqbal 1, Munir Ozturk 2, Mehmeterdal Sakcali 3

Hamdard University, Karachi, PakistanEge University, Izmir, TurkeyFatih University, Istanbul, Turkey

-mail address: [email protected] (M.S. Sakcali)

Very little information is available on the proteome changesccurring in response to nitrogen amount. In this study twoimensional electrophoresis was used to investigate proteomeifferences between two contrasting cultivars of wheat (Triticumestivum) and the changes caused by nitrogen nutrition deficitn the leaf tissue. Some physiological features, such as N-uptakeinetics and activities of N-assimilation enzymes as well as proteinontent were measured previous to the proteomic analysis. Statis-ical analysis identified 152 differential protein spots in the selectedair wise comparisons of experimental conditions and correlatedith the expression cluster revealed by the PD Quest analysis. The

8 protein spots showing substantial difference in their expressionere subjected to matrix-assisted laser desorption ionization time

f flight to deduce their possible functions. Many of these changeseferred to enzymes involved in different pathways implicated inhe balance of the energy, and redox status of the cell. Gene expres-ion analysis of these different proteins by quantitative real timeCR showed that the mRNA level was correlated well with the pro-ein level. This work provides an insight on the characterization ofroteome changes that occur in response to nitrogen deficiency inrop plants.

oi:10.1016/j.copbio.2011.05.429

6

ermination and growth patterns of sugarbeet (Beta vul-aris L.) lines and cultivars at different ploidy levels

ustafa Yildiz, Nazif Korkmaz, Serap Kurumlu, Burak Onol, Cansuelci

Department of Field Crops, Faculty of Agriculture, University of Ankara,nkara, Turkey

-mail address: [email protected] (S. Kurumlu)

There are differences between diploid and polyploid plantsrom morphological, physiological and biochemical aspects. In thisesearch, the germination and growth patterns of sugarbeet geno-

ypes at different ploidy levels were evaluated. Two diploid (Felicitand Agnessa) and two tetraploid (CBM 315 and AD 440) sugar-eet genotypes were grown in boxes (50 × 25 cm) for 6 months.uring the study, morphological, analytical and cytological char-