bacterial and viral contamination...bacterial analysis of restored and disinfected water sources...

1
Bacterial and Viral Contamination of Drinking Water Sources in the Upper Ouémé Catchment J. Verheyen (1), A. Uesbeck (2), T. El-Fahem (3), F. Mazou (2), T. Klein (6), A. Fink (5), J. Rissland (7), R. Baginski (2), H. Pfister (1), M. Krönke (2) 1 Institute of Virology, University of Cologne, 2 Institute of Medical Microbiology, Immunology and Hygiene, University of Cologne, 3 Institute of Geology, University of Bonn, 5 Institute of Geophysics and Meteorology, University of Cologne, 6 Institute of Social & Cultural Anthropology, University of Cologne, 7 lögd, Landesinstitut für den Öffentlichen Gesundheitsdienst NRW Bacterial water quality Waterborne pathogen bacteria as E. coli, Salmonella ssp., Shigella sp., Vibrio cholerae and others are isolated from water samples by cultivation on special selective nutrient media in the IMPETUS laboratory in Parakou. Positive samples are differentiated by serological, biochemical and genetic methods at the Institute of Medical Microbiology, Immunology and Hygiene in Cologne Bacteriologic analysis of water samples show following results: Noticeable contaminations by non-typhoid Salmonellae could be observed in 8 % of open drinking water sources. These Salmonellae which may be responsible for enteric fevers, gastroenteritis and septicaemia are found to be rarely known serotypes in Germany. A hitherto unknown serotype with the antigen formula 1,42:l,w:z35 could also be isolated and will be designated <Salmonella Parakou>. Salmonellae serve as indicator organism for the evaluation of epidemiologic data. Water sources found to be unacceptably contaminated were subject of disinfection by application of chlorine dioxide- solutions. A few days after successful disinfection most wells exhibit new bacterial contaminations. It can be suggested, that these organisms are passed from the ground into well water via “puisettes” (bucket), which are used to scoop water and not stored properly after usage. This seems to be one main source for bacterial contamination of water. Plastic buckets (“Puisettes”) used to scoop water from wells Cooperations The Swiss organisation HELVETAS performs restorations of defective water wells and pumps. Large village wells are deepened if possible and finally pumps are installed on the top to avoid usage of “puisettes” and to close the system hermetically. In cooperation bacterial analyses of water samples before and after intervention of Helvetas are carried out in the IMPETUS-Laboratory at Parakou by our team to monitor the hygienic improvements. Epidemical studies are underway with the university of Parakou to determine the burden of viral diarrheic diseases in children (rota- and adenoviruses). The results could be used as response indicators after the improvement of hygienical conditions. ...52 other rare Serotypes (< 3%) and one new serotype S. Virchow (0,5 %) S. Virchow (4,7 %) S. Bovis-morbificans (0,6%) S. Rostock (4,7 %) S. Infantis (1,1 %) S. Muenster (6,3 %) S. Typhimurium (23,8 %) S. Give (9,5 %) S. Enteritidis (68,3 %) Serotypes isolated in Benin Serotypes the most frequent in Germany (RKI, Berlin) Comparison of Salmonella-Serotypes in Germany and Benin Viral water quality 10l of water are filtrated in the IMPETUS laboratory in Benin with a special designed suitcase and were analysed in Cologne. The validation of this method showed that water samples spiked with 1ml of reference Adenovirus suspension corresponding to the concentration of virus shed by symptomatic patients, tested positive. Viral contamination of drinking water sources: 8,8% Adenoviruses 1,5% Rotaviruses 0,5% Enteroviruses The comparison of positive and negative tested samples in three villages with the amount of rainfall suggested the need of moderate rainfall in the days before the sample is taken for viral contamination (Tab. below). The amount of rainfall (blue columns) was analysed in comparison with the number of analysed water wells (grey columns) and adenovirus positive wells (red columns). Adenovirus contamination in Gorobani-Thian-Tourou correlated to the amount of rainfall in June-July 2004 Factors influencing and being influenced by water quality Type of water source Animal husbandry Disinfection Water borne diseases (Children mortality, loss of man power) Bacterial and viral water quality Water consumers Hygienic behaviour, Traditional use of water Restoration of wells Geologic conditions Climate 1 Pump contaminated by coliform bacteria Pumps 70 % contaminated by E. coli or other coliform bacteria 8 % contaminated by Salmonellae Wells, marigots Contamination Water source Traditional well Modern well “Marigot” Pump Subjective estimation of water quality by water consumers very bad bad good Background The quality of drinking water is significant for health in both developing and developed countries worldwide. Water quality can have major impact on health, both through outbreaks of waterborne disease and by contributing to the background rates of disease. About 2 million people die every year due to diarrhoeal diseases, most of them are children less than 5 years of age. [http://www.who.int/topics/water] Aims: § Create a database of drinking water sources in the upper Ouémé catchment. § Establish methods for detection of bacterial and viral contamination and to evaluate water quality in Benin. § Analyse factors influencing the bacterial and viral water quality. § Support stakeholders in construction and restoration of drinking water sources. § Estimate drinking water quality in different future scenarios based on changing conditions. Physico-chemical analysis of drinking water In contrast to public village wells and house wells which are usually dugged into the saprolite, boreholes for pumps are drilled into the underlying crystalline rocks where prospected fractures assure sufficient water supply. All over the upper Ouémé catchment the groundwater table fluctuates during the year from a depth of 2m below ground in the rainy season to 15m below ground at the end of the dry season. Apr-01Oct-01Apr-02Oct-02Apr-03Oct-03Apr-04Oct-04 Sampling Date 0 20 40 60 80 100 10 30 50 70 90 NO 3 - + NO 2 - [mg/l] Dogu? well (village center) well (village margin) The physico-chemical quality of groundwater from wells and pumped boreholes is generally acceptable with the exception of widespread nitrate contamination. Low horizontal hydraulic conductivity of the saprolite layers prevents flow of nitrate or other contaminants along long distances. Thus well contamination must take place directly above the well or is due to surface and interflow carrying nitrogen deposits from the soil zones into the wells and pumps. The figure shows increasing concentrations of the nitrogen components in the rainy season for several years at two wells in Dogué. The fractures are draining the saprolite layers above them. Wide range transport of nitrates in the fracture network affecting boreholes of pumps might occur but is not proven yet. Applications: § A database of drinking water sources in the triangle of the cities Bassila, Djougou and Parakou is created and used to coordinate sample collections in different seasonal settings and to plan further interventions. § Methods for detection of bacterial and viral contamination in drinking water are established to analyse drinking water quality. § Capacity building through education of Beninese lab technicians. § Monthly analysis of the drinking water reservoir of Parakou in consultation with the local SONEB. § Support of decision making for restoration of defect wells in cooperation with the Swiss project HELVETAS: after publication of the above mentioned data, HELVETAS mainly restoring defective wells so far is now converting them into pumps by central insertion of a drill stem and coverage of the upper opening to prevent further contamination. § Bacterial analysis of restored and disinfected water sources will also be performed in cooperation with the local “Service de l´Hydraulique” and the “Service de l´Hygiène”, Parakou. § The alteration of bacterial and viral water contamination will be used as response indicator. § Viral water contamination seems to be directed by water flow after an appropriate amount of rainfall stressed by the results of physicochemical analysis. -60 -40 -20 0 20 40 60 1.06.04 3.06.04 5.06.04 7.06.04 9.06.04 11.06.04 13.06.04 15.06.04 17.06.04 19.06.04 21.06.04 23.06.04 25.06.04 27.06.04 29.06.04 1.07.04 3.07.04 5.07.04 7.07.04 9.07.04 11.07.04 13.07.04 15.07.04 17.07.04 19.07.04 21.07.04 23.07.04 25.07.04 27.07.04 29.07.04 date mm rainfall / 24h 0 2 4 6 8 10 12 14 16 18 number of analysed wells / number of wells with adenovirus contamination P8

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Page 1: Bacterial and Viral Contamination...Bacterial analysis of restored and disinfected water sources will also be performed in cooperation with the local“Service de l´Hydraulique”

Bacterial and Viral Contamination of Drinking Water Sources in the Upper Ouémé Catchment

J. Verheyen (1), A. Uesbeck (2), T. El-Fahem (3), F. Mazou (2), T. Klein (6), A. Fink (5), J. Rissland (7), R. Baginski (2), H. Pfister (1), M. Krönke (2)

1 Institute of Virology, University of Cologne, 2 Institute of Medical Microbiology, Immunology and Hygiene, University of Cologne, 3 Institute of Geology, University of Bonn, 5 Institute of Geophysics and Meteorology, University of Cologne, 6 Institute of Social & Cultural Anthropology, University of Cologne, 7 lögd, Landesinstitut für den Öffentlichen Gesundheitsdienst NRW

Bacterial water quality

Waterborne pathogen bacteria as E. coli, Salmonella ssp., Shigella sp., Vibrio cholerae and others are isolated from water samples by cultivation on special selective nutrient media in the IMPETUS laboratory in Parakou. Positive samples are differentiated by serological, biochemical and genetic methods at the Institute of Medical Microbiology, Immunology and Hygiene in Cologne

Bacteriologic analysis of water samples show following results:

Noticeable contaminations by non-typhoid Salmonellae could be observed in 8 % of open drinking water sources. These Salmonellae which may be responsible for enteric fevers, gastroenteritis and septicaemia are found to be rarely known serotypes in Germany. A hitherto unknown serotype with the antigen formula 1,42:l,w:z35 could also be isolated and will be designated <Salmonella Parakou>. Salmonellae serve as indicator organism for the evaluation of epidemiologic data.

Water sources found to be unacceptably contaminated were subject of disinfection by application of chlorine dioxide-solutions. A few days after successful disinfection most wells exhibit new bacterial contaminations.It can be suggested, that these organisms are passed from the ground into well water via “puisettes” (bucket), which are used to scoop water and not stored properly after usage. This seems to be one main source for bacterial contamination of water.

Plastic buckets (“Puisettes”) used toscoop water from wells

Cooperations

The Swiss organisation HELVETAS performs restorations of defective water wells and pumps. Large village wells are deepened if possible and finally pumps are installed on the top to avoid usage of “puisettes” and to close the system hermetically. In cooperation bacterial analyses of water samples before and after intervention of Helvetas are carried out in the IMPETUS-Laboratory at Parakou by our team to monitor the hygienic improvements.

Epidemical studies are underway with the university of Parakou to determine the burden of viral diarrheic diseases in children (rota- and adenoviruses). The results could be used as response indicators after the improvement of hygienical conditions.

...52 other rare Serotypes (< 3%) and one new serotype

S. Virchow (0,5 %)

S. Virchow (4,7 %)S. Bovis-morbificans (0,6%)

S. Rostock (4,7 %)S. Infantis (1,1 %)S. Muenster (6,3 %)S. Typhimurium (23,8 %)

S. Give (9,5 %)S. Enteritidis (68,3 %)

Serotypes isolated in BeninSerotypes the most frequentin Germany (RKI, Berlin)

Comparison of Salmonella-Serotypes in Germany and Benin

Viral water quality

10l of water are filtrated in the IMPETUS laboratory in Benin with a special designed suitcase and were analysed in Cologne. The validation of this method showed that water samples spiked with 1ml of reference Adenovirus suspension corresponding to the concentration of virus shed by symptomatic patients, tested positive.

Viral contamination of drinking water sources:8,8% Adenoviruses1,5% Rotaviruses0,5% Enteroviruses

The comparison of positive and negative tested samples in three villages with the amount of rainfall suggested the need ofmoderate rainfall in the days before the sample is taken for viral contamination (Tab. below).

The amount of rainfall (blue columns) was analysed in comparison with the number of analysed water wells (grey columns) and adenovirus positive wells (red columns).

Adenovirus contamination in Gorobani-Thian-Tourou correlated to the amount of rainfall in

June-July 2004

Factors influencing and being influenced by water quality

Type ofwater source

Animalhusbandry

Disinfection

Water borne diseases(Children mortality, loss of man power)

Bacterial and viral water quality

Water consumers

Hygienic behaviour, Traditional use of water

Restorationof wells

Geologicconditions

Climate

1 Pump contaminated by coliform bacteriaPumps

70 % contaminated by E. coli or other coliform bacteria8 % contaminated by Salmonellae

Wells, marigots

ContaminationWater source Traditional well Modern well “Marigot” Pump

Subjective estimation of water quality by water consumers

very bad bad good

Background

The quality of drinking water is significant for health in both developing and developed countries worldwide. Water quality can have major impact on health, both through outbreaks of waterborne disease and by contributing to the background rates of disease. About 2 million people die every year due to diarrhoeal diseases, most of them are children less than 5 years of age. [http://www.who.int/topics/water]

Aims:

§ Create a database of drinking water sources in the upper Ouémé catchment.

§ Establish methods for detection of bacterial and viral contamination and to evaluate water quality in Benin.

§ Analyse factors influencing the bacterial and viral water quality.

§ Support stakeholders in construction and restoration of drinking water sources.

§ Estimate drinking water quality in different future scenarios based on changing conditions.

Physico-chemical analysis of drinking water

In contrast to public village wells and house wells which are usually dugged into the saprolite, boreholes for pumps are drilled into the underlying crystalline rocks where prospected fractures assure sufficient water supply. All over the upper Ouémé catchment the groundwater table fluctuates during the year from a depth of 2m below ground in the rainy season to 15m below ground at the end of the dry season.

Apr-01Oct-01Apr-02Oct-02Apr-03Oct-03Apr-04Oct-04

Sampling Date

0

20

40

60

80

100

10

30

50

70

90

NO

3- +

NO

2- [

mg/

l] Dogu?well (village center)well (village margin)

Apr-01Oct-01Apr-02Oct-02Apr-03Oct-03Apr-04Oct-04

Sampling Date

0

20

40

60

80

100

10

30

50

70

90

NO

3- +

NO

2- [

mg/

l] Dogu?well (village center)well (village margin)

The physico-chemical quality of groundwater from wells and pumped boreholes is generally acceptable with the exception of widespread nitrate contamination . Low horizontal hydraulic conductivity of the saprolite layers prevents flow of nitrate or other contaminants along long distances. Thus well contamination must take place directly above the well or is due to surface and interflow carrying nitrogen deposits from the soil zones into the wells and pumps. The figure shows increasing concentrations of the nitrogen components in the rainy season for several years at two wells in Dogué. The fractures are draining the saprolite layers above them. Wide range transport of nitrates in the fracture network affecting boreholes of pumps might occur but is not proven yet.

Applications:

§ A database of drinking water sources in the triangle of the cities Bassila, Djougou and Parakou is created and used to coordinate sample collections in different seasonal settings and to plan further interventions.

§ Methods for detection of bacterial and viral contamination in drinking water are established to analyse drinking water quality.

§ Capacity building through education of Beninese lab technicians.

§ Monthly analysis of the drinking water reservoir of Parakou in consultation with the local SONEB.

§ Support of decision making for restoration of defect wells in cooperation with the Swiss project HELVETAS: after publication of the above mentioned data, HELVETAS mainly restoring defective wells so far is now converting them into pumps by central insertion of a drill stem and coverage of the upper opening to prevent further contamination.

§ Bacterial analysis of restored and disinfected water sources will also be performed in cooperation with the local “Service de l´Hydraulique” and the “Service de l´Hygiène”, Parakou.

§ The alteration of bacterial and viral water contamination will be used as response indicator.

§ Viral water contamination seems to be directed by water flow after an appropriate amount of rainfall stressed by the results of physicochemical analysis.

-60

-40

-20

0

20

40

60

1.0

6.0

4

3.0

6.0

4

5.0

6.0

4

7.0

6.0

4

9.0

6.0

4

11.0

6.0

4

13.0

6.0

4

15.0

6.0

4

17.0

6.0

4

19.0

6.0

4

21.0

6.0

4

23.0

6.0

4

25.0

6.0

4

27.0

6.0

4

29.0

6.0

4

1.0

7.0

4

3.0

7.0

4

5.0

7.0

4

7.0

7.0

4

9.0

7.0

4

11.0

7.0

4

13.0

7.0

4

15.0

7.0

4

17.0

7.0

4

19.0

7.0

4

21.0

7.0

4

23.0

7.0

4

25.0

7.0

4

27.0

7.0

4

29.0

7.0

4

date

mm

rain

fall /

24

h

0

2

4

6

8

10

12

14

16

18

nu

mb

er

of

an

aly

sed

wells

/ n

um

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of

wells

wit

h

aden

ovir

us

con

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P8