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Bruker Optik Application of „Lightwaves“ FT-IR-Spektroscopy

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Bruker Optik

Application of „Lightwaves“

FT-IR-Spektroscopy

Content

• Bruker Optik

• Infrared Spectroscopy and Molecular Vibration

• FT-IR spectrometer

• Interferometer

• FT-IR Measurements

• Measurement Techniques (ATR)

• Data evaluation

• Examples

Bruker Optics

Since 2006 part of the Bruker Biosciences holding

Bruker Bioscience

Bruker OpticsFT-IR

FT-NIRRamanTD-NMR

Bruker AXSXRFXRD

Bruker DaltonicsMALDI-TOF

FT-MSESI-MS

Bruker BiospinNMRMRIESR

All Bruker companies operate independently.

§ GERMANYBILLERICA, MA §

§ Headquarters

§HONG KONG

§ Sales an Service offices

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Bruker Optics - world wide presence

FT-IR FT-NIR Raman Terahertz TD-NMR

Our products are used for

molecular spectroscopy

Process Monitoring

Laboratory Analysis

Research & Development

Bruker Optics offers complete solutions

Life Science

Teaching

Bruker Optics

Bruker Optics – made in Germany

Bruker Optics is THE European supplier for FT-IR, FT-NIR and Raman spectrometer

Bruker Optik GmbHin Ettlingen,

Germany

Production Final testing

Application supportDevelopment

Bruker Optics product line

TENSOR 27FT-IR Spectrometer

IFS 125FT-IR Spectrometer

Bruker Optics is the only supplier with a complete product line

MPA

Bruker Optics - 2007

Infrared SpectroscopyMolecular Vibrations

Electromagnetic radiation

Incident light beamIncident light beam

Reflection

Matter

Photoluminescence

Scattering

TransmissionAbsorptionAbsorption

2. Interaction of Radiation and Matter

Absorbance A:CdA ⋅⋅= ε

(Beer‘s law)

ε: molar absorptivity

d: thickness of sample

C: molar concentration

Interaction between light and matter

Excitation of molecular vibration

Interaction of radiation and matter

IR spectroscopy is based on the absorption of infrared light by the substance to be measured. This absorption excites molecular vibrations and rotations, which have frequencies that are the same as those within the infrared range of the electromagnetic spectrum.

The following simple model of a harmonic oscillator used in classical physics describes IR absorption. If atoms are considered to be particles with a given mass, then the vibrations in a diatomic molecule (e.g. HCl) can be described as follows:

Mechanical model of a vibrating diatomic molecule

Vibration Theory (1)

2. Vibration Theory (2)

ν: vibrational frequency

k: spring constant

µ: reduced mass

m1: mass of molecule 1

m2: mass of molecule 2

0dtd

2

2

=⋅+ rkrµ

Differential Equation:

CLASSICAL DESCRIPTION:

3 absorption peaks for different force constants. Note that by convention, in infrared spectroscopy wavenumbers are plotted

right-to-left; i.e. highest wavenumber to the left.

2. Vibration Theory (3)

Effect of different spring constants k:

3 absorption peaks for different atomic masses. Note that by convention, in infrared spectroscopy wavenumbers are plotted

right-to-left; i.e. highest wavenumber to the left.

2. Vibration Theory (4)

Effect of different atomic masses m:

2. Vibration Theory (5)QUANTUM MECHANICAL DESCRIPTION:

Potential energy curve for a harmonic oscillator

( ) ψψVdr

ψd2 2

2

⋅=⋅+ Ermh (Schrödinger Equation)

h: Planck‘s constant

V: harmonic potential

E: energy

ψ: wave function

Potential energy curve for an anharmonic oscillator

2. Vibration Theory (6)Improvement of the model: The Anharmonic Oscillator

2. Vibration Theory (7)

What kind of molecules absorb infrared light?

Heteronuclear diatomic molecule

IR active

Homonuclear diatomic molecule

IR inactive

An accurate model of a molecule is given by the anharmonicoscillator. The potential energy is then calculated by the Morse equation, and is asymmetric. The energy levels are no longer equally spaced, and are given by:

Ev=(v + ½) h • ν - (v + ½)2 xGl h • ν

where xGl is the anharmonicity constant.

The anharmonic oscillator model allows for two important effects:1) As two atoms approach each other, the repulsion increases very rapidly.

2) If a sufficiently large vibrational energy is reached the molecule will dissociate (break apart). This is called the dissociation energy.

In the case of the anharmonic oscillator, the vibrational transitions no longer only obey the selection rule ∆v = ±1. This type of vibrationaltransition is called fundamental vibration. Vibrational transitions with ∆v = ±1, ±2, ±3, ... are also possible, and are termed overtones.

Potential energy curve for an anharmonic oscillator

Vibration Theory (8)

Which kind of vibrations?

Stretching vibrations

Symmetric stretching vibration Anti-symmetric stretching vibration

For example: water

Deformation vibrations

Which kind of vibrations?

IR-Spectrum of water

15002000250030003500wavenumber cm-1

6065

7075

8085

9095

100

Tran

smis

sion

[%]

Hexane

More than 50 different vibrations

Hexane

1000150020002500300035004000wavenumber cm-1

2040

6080

100

Tran

smis

sion

[%]

C-H stretch C-H deformation

„Fingerprint region“

IR absorption of different organic molecular classes 2. IR Absorption of organic molecules

2. The Infrared Spectrum is ...

Each molecule has got itsown individual spectrum

„ ... like aFingerprint “

Fingerprint range:1430 ... 1000 cm-1

FT-IR Spectrometer

Dispersive IR spectrometer FT-IR spectrometer

Principle layout of IR spectrometer

Layout of an FT-IR spectrometer

Electronic Source compartment

Sample compartment

Sample position

Detector

Interferometer compartment

Aperture wheelFilter wheel

Interferometer

Michelson Interferometer

Source

Detector

Movingmirror

Fixedmirror

∆x

Beamsplitter

L

L + ∆x

x=0

Optical Retardation

Inte

nsity

Detector signal

Frequency

Inte

nsity

Spectrum

Monochromatic source

Monochromatic source detector signal

3. Origin of the interferogram (1)Constructive interference:

Destructive interference:

Detector signal,symmetric cos-Wave:

222 λ

⋅=∆⋅ kx

( )2

122 λ⋅+=∆⋅ kx

( ) ( ) ( )xx ∆⋅⋅=∆ νπν 2cosSI

( ),...2,1,0=k

e.g. He-Ne laser

Optical retardation

Inte

nsity

Nine waves with different wavelengths

Frequency

Inte

nsity

Spectrumconsisting of 9 single frequencies

Optical retardation

Inte

nsity

Resulting detector signal:

3. Origin of the interferogram (2)

Dephasing for polychromatic light

Example for an wavelength-independent light modulator:

The interferometer is a wavelength-dependend„light modulator“.

Resulting detector signal

Frequency

Inte

nsity

IR-source

Optical retardation

Inte

nsity

Frequency distribution of a black body source

3. Origin of the interferogram (3)

„center burst“„interferogram peak“„ZPD“

3. Example: Interferograms and SpectraInterferogram and Spectrumð „Reciprocal Relationship“

Comparison between „Raman Naphtalene“ and „White Light“:

Dispersive IR spectrometer

FT-IR spectrometer

IR spectrometer principle3. Advantages of FT-IR Spectroscopy

1) Connes´ advantage:precision of wavenumber axis scale

2) Jacquinot´s advantage:large throughput withcircular apertures

3) Fellgett´s advantage:multiplexed measurement

3. The Michelson Interferometer

RockSolid Interferometer

State-of-the-art technology:

RockSolidTM Interferometer

• CubeCorner mirrors:

permanently aligned

Angle accuracy:

better than 0,001°

(=1cm on 1km)

• Wearless bearings based on

steel springs,

like a clockwork

US Patent No 5.309.217

Using zero crossings: fixed sampling,

but: Undersampling / Spacing Variation and

Interpolating possible

Sampling with a He-Ne laser15798 cm-1, 633 nm, 474 THz:

Every ...thZero-Crossing

„0.25“

„0.5“

1

2

3

4

Spectral Band-width / cm-1

63192

31596

15798

7899

5266

3949

3. Sampling in FT-IR spectrometers (1)

3. Sampling in FT-IR spectrometers (2)

AD

FFT

SourceLaser

Laser detector A

Laser detector B

IR detector

Moveable mirror

3. Sampling in the time domain (1)-0.

3-0.

2-0.

10.0

0.10.2

time

t1 t2 t3 t4 t5 t6 t7 t8 t9 t10 t11 t12 t13 t14

Reference laser fringes

Detector signal

Delta-Sigma-ADC sample times

fixed ∆Τ

Advantages:• Very high resolution

• No gain ranging

• No analog filters

• Low cost

3. Sampling in the time domain (2)Ultimate accuracy determined by:

1. Where to sample? 2. How to sample?

1.a) Analog comparator: measure time between laserzero crossings

Pros:

• Accuracy limited only by noise

and clock resolution (e.g. 20 ns)

• Values readily available

no delay, no computations

Cons:

• No noise averaging

t1 t2

Comparator output

AC-coupled laser fringes

0 Volt

Count ticks from fast master clock

+

-

3. Sampling in the time domain (3)Ultimate accuracy determined by:

1. Where to sample? 2. How to sample?

1.b) 2nd Delta-Sigma-ADC: fit a cubic to digitized laser fringes

Pros:

• Fit provides noise averaging

Cons:

• Wave form is critical

• Requires computational power

• High oversampling (x10)

limits scanner velocity

(typ. 10 kHz for 192 kHz ADC)

Cubic polynomial

3. Sampling in the time domain (4)

2. How to sample:

Bandwidth-limited signal (ωmax),

ð Convolution with sinc:

Ideal weighting function:

•Flat pass band

•High stop band rejection

•Low number of coefficients

•Linear phase

ADC samples

Pos. 0

Pos. 1 Pos. -1

0 99 512 Master clock ticks

Laser zero crossing

Weighting function (kernel)

( )

( ) ( )( )∑∞+

−∞=

−⋅

=

kK

K

kTtkTx

tx

maxsinc ω

3. Sampling in the time domain (5)

Frequency response of carefully designed kernel (64 coefficients):(phase response is linear, leading to a constant delay)

dB

1 2 3 4 5 6 7 8 9-160

-140

-120

-100

-80

-60

-40

-20

0

f/f00 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8

-5

-4

-3

-2

-1

0

1

2

3

4

5

f/f0

10-4 dB

FT-IR measurements

Resulting detector signal

Frequency

Inte

nsity

IR light source

∆X, moving mirrorIn

tens

ity

Origin of the interferogram

Transmission spectrum

1.) In the empty sample compartment an Interferogram is detected. The result of the FOURIER transformation is R(ν).

FourierFourier--TransformationTransformation

5001000150020002500300035004000wavenumber cm-1

0.10

0.20

0.30

0.40

Sing

le c

hann

elin

tens

ity

∆X, moving mirror

Det

ecto

rint

ensi

ty

2.) A second interferogram is detected with the sample placed in the sample compartment. The result of the FOURIER transformation is S(ν). S(ν) shows similarities to the reference spectrum R(v), but has lower intensities at the regions the sample absorbs radiation.

FourierFourier--TransformationTransformation

5001000150020002500300035004000wavenumber cm-1

0.10

0.20

0.30

0.40

Sing

le c

hann

el in

tens

ity

∆X, moving mirror

Det

ecto

r int

ensi

ty

Transmission spectrum

The transmission spectrum T(ν) is calculatedas the ratio of the sample and referencesingle channel spectra:

T(ν) = S(ν)/R(ν).

5001000150020002500300035004000wavenumber cm-1

0.10

0.20

0.30

0.40

Sing

le c

hann

elin

tens

ity

5001000150020002500300035004000wavenumber cm-1

4060

8010

0Tr

ansm

issi

on [%

]20

ratioratio

Transmission spectrum

Two separated lines with the distance

d in the spectrum lead to a periodic

signal in the interferogram with a

distance 1/d.

RAYLEIGH criterion:

∆X ≥ 1/d

wavenumber cm-1

d IR Spectrum

Interferogram

Spectral resolution

source

detector

movablemirror M2

fixedmirror M1

∆x

Beam splitter

L

L + ∆x

x=0

0.5

0.6

0.7

0.8

0.9

1.0

Sing

le c

hann

el0.

50.

60.

70.

80.

91.

0Si

ngle

cha

nnel

High spectral resolution

Low spectral resolution

ATRAttentuated Total Reflection

ATR TheoryAttenuated Total Reflection

sample

ATR crystal

ATR crystal

n1

sample

n2

sample

ATR crystal

ΘRefractive index

n1 > n2

λ = wavelength, np = refractive index of crystalθ = Einfallswinkelnsp = ratio of refractive index

sample/crystal.

2/12sp

2p )(sinn2 n

dp−

=θπλ

Penetration depth

*: calculated for a sample with n = 1.4 @ 1000cm-1

MaterialRefractive index

@ 1.000 cm-1

Dp *

[µm] @ 45°

Diamant 2.4 1.66

Ge 4 0.65

Si 3.4 0.81

ZnSe 2.4 1.66

Dp *

[µm] @ 60°

AMTIR** 2.5 1.46 0.96

1.04

0.5

0.61

1.04

Calculated penetration depth for some typicalATR materials

**: AMTIR: Ge33As12Se55 - Glass

The penetration depth Dp depends on the following parameters:

1.) angle of incidence

2.) refractive index

3.) wavelength of light

Penetration depth

100015002000250030003500wavenumber cm-1

0.0

0.2

0.4

0.6

0.8

1.0

Abso

rban

ce

Transmission

ATR

Penetration depth

The penetration depth Dp depends on the following parameters:

1.) angle of incidence

2.) refractive index

3.) wavelength of light

sample

wavelength wavelength

Not penetrated sample

Evaluation of IR spectra

Infrared spectroscopy is an extremely efficient analytical method due to modest operating expenditure. The analytical results are provided within a short period of time without the need of extensive sample preparation. In particular, infrared spectroscopy provides data which can be evaluated by quantity as well as by quality. The following will describe the qualitative and quantitative evaluation of acquired spectra.

•Qualitative evaluation of spectra

1. Identify an unknown substance2. Check the identification of a known substance

•Quantitative evaluation of spectra

Evaluation of spectra

A functional group within a molecule is considered as a harmonic oscillator (see vibration theory) which in a first approximation vibrates without being affected by the rest of the molecule. This results in the fact that a particular functional group shows IR absorption bands within characteristic spectral ranges: this is called group vibrations. This fact serves as the basis for spectral interpretation, whereby the position, (relative) intensity and half-width of a band decide whether a band can be assigned to a specific structural group.

Many functional groups of organic molecules show characteristic vibrations corresponding to absorption bands within defined ranges of the IR spectrum. These molecular vibrations are mainly restricted to the functional group and do not affect the remaining molecule, i.e. such functional groups can be identified by their absorption band. This circumstance, apart from a straightforward acquisition technique, makes IR spectroscopy to be one of the simplest, fastest and most reliable methods when assigning a substance to its specific class of compounds. The position and intensity of the absorption bands are extremely specific in the case of a pure substance. This enables the IR spectrum, similar to the human fingerprint, to be used as a highly characteristic feature for identification.

Identify an unknown substance

a) Structural determination by interpreting spectra

5001,0001,5002,0002,5003,0003,5004,000Wavenumber / cm-1

4060

8010

0Tr

ansm

issi

on [%

]20

IR absorption of different organic molecular classes

Besides basic spectral interpretation, various comprehensive digital spectral libraries have been compiled according to different chemical classes and groups of substance. These are provided, for example, by companies like Bruker and Sadtler. Apart from working with existing spectral libraries, it is possible to create your own libraries using modern spectroscopic software,see OPUS/SEARCH. Different spectra regarding the number of bands and half-width, may require different search algorithms. Therefore, OPUS/SEARCH has the flexibility in providing various search options.

b.) Comparing with spectral libraries

Identify an unknown substance

Infrared spectroscopy is a perfect analytical tool for quality control. It gives the answer to the following question: “Does the quality of the raw material delivered to the receiving department comply with the specifications?” The underlying concept is very easy:

identical material = identical IR spectrum

The identification is done by comparing measured spectra with reference spectra already saved. The method is based upon the following considerations:

•chemically different materials result in different spectra

•real spectral differences exceed the reproducibility of repeated measurements

•reference samples represent the expected sample variations caused by supplier, batch, season, purity, grain size etc.

It is important to note that the reference samples can vary to a certain degree, a circumstance that is experienced within quality control every day. The spectrum of the material to be identified is compared with the reference sample by means of a valid tolerance previously defined. How to create a reference library and to compare spectra will be described in the following.

Check the identity of a known substance

2.) Calculate average spectrum & threshold values

3.) Library structure & validation

••

••

•• •

•••

•••

•••

••

•• • •

1.) Measure reference sample

Wavenumber / cm-1

Abso

rban

ce

Wavenumber / cm-1

Abso

rban

ce

Reference library structure

Identified sample:

material X

1.) Measure new samples

2.) Compare with library

Identifying new samples

3.) Identify material

The basic principle for quantitative evaluation in optical spectroscopy as well as in IR spectroscopy is the Bouguer-Lambert-Beer Law which had already been defined in 1852. Quantitative determinations by means of IR spectroscopy are preferably performed in solution. Transmission T of a sample is defined as:

T = I / I0

Io is the intensity of the incident light beam, I is the intensity of the light beam leaving the sample. The percentage transmission (%T) is 100 • T. When traversing the measurement cell, the light intensity decreases exponentially:

I = I0 • exp(-2.303ε • c • b)

Where ε is the molar absorption coefficient (in L mol-1 cm-1), c is the sample concentration (in mol L-1) and b the thickness of the measurement cell (in cm). The absorption coefficient ε is a value which depends on either the wavelength or the wavenumber, which is typical for the compound analyzed. From the equation above, it follows that:

log (I / I0) = -ε • c • b, or:A = log (I0 / I) = ε • c • b

where A is the absorbance. Because of the Bouguer-Lambert-Beer Law, the relationship between absorbance and concentration of the absorbing substance is a linear function.

Quantitative evaluation of spectra

In practice the relationship between concentration and absorbance is empirically determined by calibration. Calibrating means finding the mathematical connection between concentration and the measurement values.

In the first step, spectra of substances with known composition are recorded. Then, these acquired spectra and the data available from a reference analysis (concentration or substance properties) areused to determine a calibration function. The software package OPUS/QUANT provides several algorithms to do this.

In the second step, spectra of substances with an unknown composition are measured and then used to determine the properties of interest by means of the calibration function.

There are two different forms of calibration:

Univariate calibration (OPUS)

Correlates just one piece of spectral information (e.g. peak height or peak area) with the reference values of the calibration set.

Multivariate calibration (OPUS/QUANT)

Correlates considerably more spectral information using larger spectral ranges with the reference values of the calibration set. This leads to a higher degree of precision and reduced chance of error. Partial Least Squares ((PLS) is an example of this method and isimplemented in OPUS/QUANT.

X

Analysis

1

2

3

4

Abso

rban

ceConcentration

X

1

3

2

4

Abs o

rban

ce

Wavelength

Calibration

Quantitative evaluation of spectra

Examples

Industrial Applications

1) Compensation of velocity variations

2) Compensation of source fluctuations

Trace impurities in theatmosphere

4. FT-IR Spectroscopy at exotic sites

The Observatory on the Jungfraujoch, the “Sphinx”, 3700m altitude.

4. Size of the IFS 120

FT-IR Spectroscopy at exotic sites

The “The “PolarsternPolarstern” of the Alfred” of the Alfred--WegenerWegener--InstitutInstitut, , BremerhavenBremerhaven

Bruker OptikSpectrometer

Forensics / Pharmaceuticals – Chinese SFDA

§ State Food and Drug Administration (SFDA) of the People's Republic of China.§ 300+ FT-NIR spectrometers

integrated into mobile laboratory vehicles.§ Deployment across China for the

rapid screening of pharmaceutical products.

Forensics / Pharmaceuticals – Chinese SFDA

Vice Premier of China, Wu Yi, inspecting the NIR testing

Real Counterfeit

Real example of counterfeit drugs

JungfraujochJungfraujoch Observatory, SwitzerlandObservatory, Switzerland3.700 m above sea level3.700 m above sea level

An exotic place for an FT-IR spectrometer