animal physiology and biochemistry lab manual

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Animal physiology & Biochemistry, Animal Biotechnology Lab Manual NAME:…………………………………… Reg.No:………………………………. COURSE CODE…………………….. ACADEMIC YEAR………………………….. Content S.No Title of the Experiment Page No 1. Rate of oxygen consumption in a fish 2. Effect of temperature on operculum movement of fish

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Page 1: Animal physiology and biochemistry lab manual

Animal physiology & Biochemistry, Animal

Biotechnology

Lab Manual

NAME:……………………………………

Reg.No:……………………………….

COURSE CODE……………………..

ACADEMIC YEAR…………………………..

Content

S.No Title of the Experiment Page

No

1. Rate of oxygen consumption in a fish

2. Effect of temperature on operculum

movement of fish

Page 2: Animal physiology and biochemistry lab manual

2

3. Qualitative analysis of carbohydrate

4. Qualitative analysis of protein

5. Qualitative analysis of lipid

6. Demonstration of blood pressure using

sphygmomanometer

7. Estimation of haemoglobin

8. Action of salivary amylase in relation to

enzyme concentration

9. Action of salivary amylase in relation to

temperature

10. Counting of different kinds of blood cells

using haemocytometer

11. Isolation of genomic DNA from E. coli

12. Estimation of protein by Lowry’s Method

Dos and Don’ts in the Lab

Important Precautions to be taken

Do plan and prepare for every laboratory exercise before

coming to lab. Always do some homework before carrying

out experiments in the lab.

Page 3: Animal physiology and biochemistry lab manual

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Keep work bench neat and clean before leaving the

laboratory. Do wipe with detergents if necessary.

Dispose of biological materials such as microbes by

sterilizing and in special containers for biological hazards. Do

not throw other materials into these bags.

Tie back long hair to avoid contamination and fire hazard.

Be very careful with Bunsen burners. Always keep the burner

at distance from the organic solvents. The burner must be

turned off soon after the use.

Wash your hands before leaving the laboratory, even if you

wore gloves, wash with disinfectant in running tap water

before and after the work.

Be familiar with the chemicals in the laboratory and take

maximum care in handling each chemical.

Keep chemicals back in position after use.

You must cut your nails regularly.

Tightly close all bottles and caps

Don’ts

Don’t mishandle the chemical solutions, spirit lamp, UV

light, instruments/apparatus or electricity.

Don‘t roam here and there in the laboratory without work or

any aim.

Never misplace lab wares and other equipment.

Don‘t eat, drink, chew gum or apply cosmetics in the lab.

Never use a lab microwave, laboratory fridge or freezer for

food.

Page 4: Animal physiology and biochemistry lab manual

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LAB EXPERIMENT-

Animal physiology

and Biochemistry

Page 5: Animal physiology and biochemistry lab manual

5

Ex. No: 1

Date:

RATE OF OXYGEN CONSUMPTION IN A FISH

BACKGROUND:

Respiration by fish includes the uptake of oxygen from the environment

at sites of gas exchange (typically the gills), the use of oxygen at

mitochondria within individual cells, and the excretion of waste gases to the

environment. Respiration provides oxygen for aerobic conversion of the

energy contained in food to high-energy chemical bonds, such as those

formed when adenosine diphosphate (ADP) is changed to adenosine

triphosphate (ATP). The energy thus stored is then used to keep fish alive

(maintenance) and to allow fish to move, digest food, grow, reproduce, and

carry out all other energy-requiring functions. Measurements of respiration

often can tell us how a fish is responding to environmental conditions and

what its physiological state may be. Respirometry gives quantitative

measures of how rapidly energy and oxygen are used. Respiratory data are

important in the construction of bioenergetics models that can be used, for

example, to calculate capacities for growth and reproduction. Respiration

rates can be sensitive indicators of altered environmental conditions or

physiological states, and thus can reveal much about a fish's recent and

current activity, acclimation, and stress.

AIM:

To determine the rate of oxygen consumption by the given fish.

PRINCIPLE OF TEST

When manganous sulphate is added to the sample of water followed

by alkaline iodide, manganous hydroxide is formed. This combines with

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dissolved oxygen present in the water forming manganic hydroxide. This on

acidification in the presence of concentrated sulphuric acid release certain

amount of iodine which is equivalent to the amount of oxygen dissolved in

the water. The amount of iodine released is determined by titrating against

0.01 N sodium thio sulphate solution using 1% starch as an indicator. The

reactions are shown below:

MnSO4 + 2KOH -------àMn(OH)2 + K2SO4

2 Mn(OH)2 +O2 ----à 2 MnO(OH)2 (Basic manganic oxide)

MnO(OH)2 + H2SO4 ----àMnSO4 + 2H2O + [O]

2KI + H2SO4 + [O] -----à K2SO4 + H2O + I2

I2 + 2Na2S2O3 ------à 2NaI + Na2S4O6

MATERIALS REQUIRED:

100 ml beaker with siphon arrangement burette

Burette stand

Pipette

Conical flask

Reagent bottles

Thermometer

Balance

REAGENT REQUIRED:

Manganese Sulphate

Alkaline iodide

Concentrated H2SO4

0.01 N Sodium thiosulphate

1% Starch

METHOD:

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A living tilapia fish is kept in container containing one litre of tap

water. The same tap water is closed in a glass stopper control of bottle

known volume (250 ml). A fine layer of kerosene is added to the surface of

the experimental medium to prevent mixing with atmospheric air. The

starting time of the experiment is noted. In this condition the fish is allowed

to respire for half an hour in room temperature. The tap water in the control

bottle is kept under control during the time of experiment, so that no change

in the medium affect the control, after half an hour the water in the control

bottle is siphoned out into the analyzing bottle. The volume of analyzing

bottle is determined by Winkler’s method. The difference between the oxygen

in control water and the experimental water gives the volume of oxygen

consumed by the fish in half an hour.

ESTIMATION OF OXYGEN IN THE WATER SAMPLE:

A reagent bottle is taken and filled with water. The stopper is replaced

without enclosing any air bubble. After removing the stopper, 1 ml of

Manganous Sulphate and 1 ml of alkaline mixture were added. The

stopper is replaced and the bottle is shaken well to ensure maximum

chemical reaction and hence maximum absorption of oxygen. This is done

for the uniform distribution by precipitation. Then the precipitate is allowed

by settle down for few minutes. After this 1 ml of con H2SO4 is added to the

solution and is shaken well till the precipitate is not seen in the bottle. The

burette is rinsed with water and 0.1 N Sodium thiosulphate, filled with 0.1

N Sodium thiosulphate solution. Initial reading of the burette is noted.

About 50 ml of solution from the bottle is transferred to a conical flask. To

this 1 ml of 1% starch is added as an indicator. Now the color of the solution

turns to dark blue. This solution is titrated against 0.01 Sodium

thiosulphate and the titration is continued till the blue color disappeared.

This is the achromic point and the final reading is noted. The volume of

Sodium thiosulphate required for titrated is noted. The titration is repeated

for concordant values. The difference between oxygen content of the control

and of the experimental bottle gives the volume of oxygen consumed by the

Page 8: Animal physiology and biochemistry lab manual

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fish in half an hour. Then the fish is removed from the experimental

medium. Weight of the fish is taken. Oxygen consumed by the fish in one

hour is calculated. The rate of oxygen consumption by the fish is calculated

by using the formula.

TABULATION:

RATE OF OXYGEN CONSUMPTION IN A FISH

S.No Volume of

sample(ml)

Burette

reading Volume

of

Na2S2O3

Concordant

value(ml) Indicator

Weight

of fish Initial

(ml)

Final

(ml)

CALCULATION:

O2/ml/litre= CD* M*E*0.698*1000*Vt

vs

CD= volume of reagent bottle

Volume of reagent bottle-volume of reagent used

M= Molarity of sodium thiosulphate(0.01)

E= Equivalent weight of oxygen

1000= To express litre

Vt= Volume of sodium thiosulphate used in titration

vs= Volume of sample titrated

O2 in control water=………………………parts/ml/hr.

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RATE OF OXYGEN CONSUMPTION IN THE EXPERI MENTAL WATER

S.No Volume of

sample(ml)

Burette

reading Volume

of

Na2S2O3

Concordant

value(ml) Indicator

Weight

of fish Initial

(ml)

Final

(ml)

CALCULATION:

O2/ml/litre= CD* M*E*0.698*1000*Vt

vs

CD= volume of reagent bottle

Volume of reagent bottle-volume of reagent used

M= Molarity of sodium thiosulphate(0.01)

E= Equivalent weight of oxygen

1000= to express litre

Vt= Volume of sodium thiosulphate used in titration

vs= Volume of sample titrated

O2 in experimental water=………………………parts/ml/hr.

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Oxygen consumed by the fish in half an hour= 02 content in the tap water-

O2 content in the experimental water

Oxygen consumed by the fish in one hour=……………..*2

Rate of oxygen consumed by the fish=…..…………../weight of the fish

=….…………..parts/ml/hr

RESULT:

Rate of oxygen consumption by the fish= …………………….parts/ml/hr.

DISCUSSION:

RVIEW QUESTIONS:

1. What is dissolved oxygen (DO)?

2. What are the approved methods for determination of DO?

3. What reagents are required for D.O. determinations using the

modified Winkler titration method?

4. What interferences affect DO determinations by the modified Winkler

titration procedure?

Page 11: Animal physiology and biochemistry lab manual

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Ex. No: 2

Date:

EFFECT OF TEMPERATURE ON OPERCULUM MOVEMENT OF FISH

BACKGROUND

Fish obtain their oxygen from water by ventilating their gills.

These breathing apparatus are highly vascularized out pocketing of the body

surface. The operculum, a protective flap, covers and protects the gills,

which are soft and delicate. The gills are ventilated by pumping water

across them in one direction. Both the mouth and operculum work together

to pump the water through the mouth, into the gills, and then out to the

sides of the body. Counting gill cover (operculum) movements is a way to

calculate respiration rates in fish. An oxygen-carbon dioxide exchange

occurs. Then the operculum opens to allow the carbon dioxide-rich water to

exit. Fish are exothermic; their body temperature is the same as water

temperature and changes directly with it. Many physiological processes,

such as metabolic rate, heart rate, and enzyme activities occur faster as

body temperature increases and slow down at colder body temperature. By

counting gill cover movements, students are getting an idea of a fishes'

response to an ecological change.

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AIM:

To determine the rate of operculum movement of a given fish at

different temperature.

MATERIALS

Fish

Crushed ice

Large beaker

Hot water

Glass stirring rod

Thermometer

Stop clock

METHOD

A living fish is taken gently without rubbing on the mucous

membrane and placed into a plastic jar containing water at room

temperature. The temperature of the water sample is recorded with the help

of thermometer. After 5 minutes a fish is exposed to the sample water, the

number of operculum movement per minute at this temperature is recorded

with the help of stop watch. The observation is repeated 3 times until two

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concordant values are obtained. After that hot is added to the water sample

until the temperature of the medium is increased by 5˚c. Again the

experiment is repeated and the number of gill movement per minute are

calculated. This same experiment is repeated with different temperature like

30˚c, 35˚c, 40˚c. The temperature of sample water is decreased by the

addition of ice water and the time taken at 25˚c 20˚c and 15˚c is noted. The

rate of operculum movement (1/t) is calculated.

TABULATION

S.No Temperature Time taken for

seconds

Concordant

value

1/t rate of

activity

FORMULA:

Q10 is the factor by which the reaction rate increases when the temperature

is raised by ten degrees.

Q10=K2 (10)/K1 (t2-t1)

Speed of rate in reciprocal=1/t

Where k1, K2 represent the velocity constant of particular temperature t2& t1

respectively

t1= Lower temperature

t2= Higher temperature

Page 14: Animal physiology and biochemistry lab manual

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K1= Rate of activity at low temperature.

K2= Rate of activity at high temperature.

RESULTS:

Effects of temperature Q10 on operculum movement of fish Q10=

Q102=

DISCUSSION:

REVIEW QUESTIONS:

1. Are fish warm-blooded or cold-blooded animals?

2. Do you think that all animals would be affected in this manner by

temperature changes? Explain.

Page 15: Animal physiology and biochemistry lab manual

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Ex. No: 3

Date:

QUALITATIVE ANALYSIS OF CARBOHYDRATE

BACKGROUND:

Carbohydrates are polyhydroxy aldehydes and ketones or substances

that hydrolyze to yield polyhydroxy aldehydes and ketones. Aldehydes (–

CHO) and ketones (= CO) constitute the major groups in carbohydrates.

Carbohydrates are mainly divided into monosaccharides, disaccharides and

polysaccharides. The commonly occurring monosaccharides includes

glucose, fructose, galactose, ribose, etc. The two monosaccharides combine

together to form disaccharides which include sucrose, lactose and maltose.

Starch and cellulose fall into the category of polysaccharides, which consist

of many monosaccharide residues.

AIM:

To detect the presence of different group carbohydrate in the given solution.

GENERAL MATERIALS:

0.1% of glucose, Test solution

I. ANTHRONE TEST:

PRINCIPLE:

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Carbohydrates are dehydrated with concentrated H2SO4 to form “Furfural”,

which condenses with anthrone to form a green color complex which can

be measured by using colorimetrically at 620nm (or) by using a red filter.

Anthrone react with dextrins, monosaccharides, disaccharides,

polysaccharides, starch, gums and glycosides. But they yields of color where

is to form carbohydrate to carbohydrate.

REAGENTS:

0.2% anthrone in con H2SO4

Test tubes

Spirit lamp

2ml pipette.

PROCEDURE:

Take 2 ml of sample solution in a test tube.

Add 1 ml of anthrone reagent and mix thoroughly

OBSERVATION:

A bluish green color develops in the test tube indicates the presence of

sugar.

II. FEHLING’S TEST:

This is an important test to detect the presence of reducing sugars. Fehling’s

solution A is copper sulphate solution and Fehling’s solution B is potassium

sodium tartrate. On heating, carbohydrate reduces deep blue solution of

copper (II) ions to red precipitate of insoluble copper oxide.

MATERIALS:

Fehling’s reagent

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Test tube

Holder

Spit lamp

PROCEDURE:

Take 5 ml of fehling’s solution in a test tube.

Add 1ml of test solution to it.

Mix well and boil in water bath.

OBSERVATION:

The production of brownish red cuprous oxide precipitate indicates the

presence of reducing sugar.

III. BENDICT’S TEST:

PRINCIPLE:

The copper sulfate (CuSO4) present in Benedict's solution reacts with

electrons from the aldehyde or ketone group of the reducing sugar. Reducing

sugars are oxidized by the copper ion in solution to form a carboxylic acid

and a reddish precipitate of copper (I) oxide

MATERIALS:

Benedict’s reagent

Test tube

Test tube holder

Sprit lamb

Measuring cylinder

PROCEDURE:

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Take 5 ml of sucrose solution in a test tube

Add 2 ml of Benedict’s reagent

Boil for two minutes.

OBSERVATION:

A yellowish- red precipitate occurs within 2 to 5 minutes indicates the

presence of monosaccharide.

IV. IODINE TEST

Iodine test is used to detect the presence of starch. Iodine is not much

soluble in water so iodine solution is prepared by dissolving iodine in water

in presence of potassium iodide. Iodine dissolved in an aqueous solution of

potassium iodide reacts with starch to form a starch/iodine complex which

gives characteristics blue black color to the reaction mixture.

PROCEDURE:

Take 2 ml of sample solution in a test tube.

Add 0.5 ml of iodine solution.

Dilute the solution with distilled water.

OBSERVATION

Appearance of blue coloration indicates the presence of starch

RESULT:

Sample…………… indicates the presence of carbohydrates in the test

solution.

DISCUSSION:

REVIEW QUESTIONS:

1. Write a test which helps to differentiate between a disaccharide and a

monosaccharide?

2. If a sample being tested gives a positive result for Benedict’s test and

Fehling's test, then what will the sample be?

Page 19: Animal physiology and biochemistry lab manual

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Ex. No: 4

Date:

QUALITATIVE ANALYSIS OF PROTEIN

BACKGROUND:

Proteins are large biological molecules composed of α-amino acids (Amino

acid in which amino group is attached to α-carbon, which exist as zwitter

ions and are crystalline in nature). They contain carbon, hydrogen, oxygen,

nitrogen and sometimes phosphorous and sulphur. Protein is an important

macronutrient essential for survival. They are constituent of calls and hence

are present in all living bodies. 10-35% of calories should come from protein.

Protein is found in meats, poultry, fish, meat substitutes, cheeses, milk etc.

AIM:

To detect the presence of protein in the given sample.

BIURET TEST:

PRINCIPLE:

This test is used to detect the presence of peptide bond. When treated

with copper sulphate solution in presence of alkali (NaOH or KOH), protein

reacts with copper (II) ions to form a violet colored complex called biuret

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MATERIALS

Biuret reagent

PROCEDURE:

Take 2 ml of sample solution in a test tube

Add 2 ml of Biuret reagent solution to it.

Mix well and observe the color.

OBSERVATION:

Development of violet color in 15 minutes indicates the presence of protein.

XANTHO PROTEIN TEST:

PRINCIPLE:

Aromatic amino acids, such as Phenyl alanine, tyrosine and

tryptophan, respond to this test. In the presence of concentrated nitric acid,

the aromatic phenyl ring is nitrated to give yellow colored nitro-derivatives.

At alkaline pH, the color changes to orange due to the ionization of the

phenolic group.

MATERIALS

• Conc.HNO3

• Blank solution

PROCEDURE:

Take 1 ml of sample solution in a test tube.

Add 0.5 ml of concentrated HNO3.

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Observe the yellow color

Boil the tube in a water bath, cool and add few drops of NaOH

solution.

OBSERVATION:

The yellow colored solution is turn into orange.

RESULT:

Sample………….. Indicates the presence of protein in the solution.

DISCUSSION:

REVIEW QUESTIONS:

1. All the amino acids with aromatic side chains give positive test to

Xanthoprotein test- justify.

2. Define “activated benzene ring”.

3. Write the reaction(s) involved in Biuret’s Test.

Page 22: Animal physiology and biochemistry lab manual

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Ex. No: 5

Date:

QUALITATIVE ANALYSIS OF LIPID

BACKGROUND:

Lipids are one of the major constituents of foods, and are important in

our diet for a number of reasons. They are a major source of energy and

provide essential lipid nutrients. Nevertheless, over-consumption of certain

lipid components can be detrimental to our health, e.g. cholesterol and

saturated fats. In many foods the lipid component plays a major role in

determining the overall physical characteristics, such as flavor, texture,

mouth feel and appearance. For this reason, it is difficult to develop low-fat

alternatives of many foods, because once the fat is removed some of the

most important physical characteristics are lost. Finally, many fats are

prone to lipid oxidation, which leads to the formation of off-flavors and

potentially harmful products. Some of the most important properties of

concern to the food analyst are:

• Total lipid concentration

• Type of lipids present

• Physicochemical properties of lipids, e.g., crystallization, melting

point, smoke point, rheology, density and color

• Structural organization of lipids within a food.

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AIM:

To determine the presence of lipids in the given sample.

GREASE SPOT TEST:

PRINCIPLE:

The working principle is that most grease or fat have a high boiling

point. So, they are non-volatile. In room temperature, the spot of water can

absorb enough heat from the air and evaporated. But the spot of grease can

never absorb enough heat to evaporate. When the liquid is inside the sheet

of paper, it diffracts light. So, light can pass from one side of the paper to

another side. This gives the phenomenon of "translucent". When there is no

liquid in the paper, there is no diffraction. So, light cannot pass it through.

MATERIALS:

Coconut oil

Paper

PROCEDURE

A drop of oil is put over a piece of ordinary paper.

OBSERVATION:

Oil spreads and leaves on oily impression on the paper. The translucent spot

indicates the presence of fat.

TEST FOR SOLUBILITY:

PRINCIPLE:

The oil will float on water because of lesser specific gravity.

MATERIALS:

Take 5 ml of water and chloroform in a separate test tube.

Add to it a few drops of sample solution and shake well.

OBSERVATION:

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The oil drops are completely dissolved chloroform. This indicates the

presence of lipids in the given solution.

EMULSIFICATION TEST:

PRINCIPLE:

When oil and water, which are immiscible, are shaken together, the oil

is broken up into very tiny droplets which are dispersed in water. This is

known as oil in water emulsion. The water molecule due to the high surface

tensions has a tendency to come together and form a separate layer. This is

why the oil and water emulsion is unstable in the presence of substances

that lower the surface tension of water. Eg: Sodium carbonate, soap, bile

salts etc.

MATERIALS:

Coconut oil

PROCEDURE:

Take 2 drops of sample solution in a test tube

Add 2 ml of water to it and shake vigorously.

OBSERVATION:

A milky white emulsion indicates the presence of lipid.

RESULTS:

Sample…………indicates the presence of lipids in the test solution.

DISCUSSION:

REVIEW QUESTIONS:

1. Give the classification of Lipids and write the biological importance.

2. Describe the structure of the triglycerides.

3. Define obesity. Name three diseases associated with obesity.

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Ex. No:6

Date:

DEMONSTRATION OF BLOOD PRESSURE USING

SPHYGMOMANOMETER

BACKGROUND

Blood Pressure (BP) is the force or pressure which the blood exerts on the

wall of blood vessels. When the left ventricle contracts and pushes blood

into the aorta the pressure produced within the arterial system is called

systolic blood pressure and in the complete cardiac diastole stage, the heart

is resting following the ejection of blood, the pressure within the arteries is

called diastolic blood pressure. In adult normal systolic BP ranges about

110-130 mm Hg and the diastolic BP ranges about 70-85 mm Hg in adult.

A sphygmomanometer is a device that measures blood pressure. It is

composes of an inflatable rubber cuff, which is wrapped around the arm. A

measuring device indicates the cuff's pressure. A bulb inflates the cuff and a

valve releases pressure. A stethoscope is used to listen to arterial blood flow

sounds.

Types

There are two types of sphygmomanometers:

Manometric

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Digital.

A manometric sphygmomanometer is the old-fashioned blood pressure-

measuring device. It is the more accurate of the two types of

sphygmomanometers. A digital sphygmomanometer uses digital readouts.

With this type of sphygmomanometer, the blood pressure reading appears

on a small screen or is signaled in beeps.

Parts of the Device

A sphygmomanometer usually consists of a:

A rubber bag surrounded by a cuff.

A manometer (usually a mechanical gauge, sometimes

electronic, rarely a mercury column).

An inflating bulb to elevate the pressure.

A deflating valve.

WORKING PRINCIPLE:

A sphygmomanometer consists of a pump, dial, cuff and a valve. To

measure blood pressure, the cuff is wrapped around the arm and then

inflated using the pump. The pressure applied by the cuff closes off the

brachial artery so that no blood flows through. The pressure is then slowly

released and sounds are detected using a stethoscope placed on the brachial

artery. Blood pressure readings are given as a fraction of two numbers,

120/80 mm Hg for example. The first number is the systolic pressure; this

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is the blood pressure when the ventricles of the heart are contracting. The

number is recorded when a sound is heard for the first time as pressure in

the cuff is slowly relaxed. The second number is the diastolic pressure,

which is the blood pressure in between contractions when the heart is

relaxed. This number is recorded when the thumping of blood squeezing

through the narrowed brachial artery is no longer heard. It is important to

note that multiple measurements of a person’s blood pressure must be

made in order to gain an accurate reading.

APPARATUS:

Sphygmomanometer

Stethoscope.

METHODS OF USING SPHYGMOMANOMETER

Open the adjusting screw at the proximal end of the pumping bulb. So

that air is removed from the cuff and tubes. Then wrap the cuff around the

upper arm just above the elbow joint and fix it with the help of attached

hook in a manner that neither it is too tight nor too loose. While wrapping

the cuff care should be taken that the tubes attached to it must face

towards the lower end. Then tighten the adjusting screw and pump the air

be pumping rubber bulb rapidly so that mercury is raised up to 110-120

mm Hg mask in the manometer. Observe the sound of arterial blood

branchial artery with the help of a stethoscope. Again pump the air slowly

and keep on observing the sound of arterial blood in the branchial artery

with stethoscope to disappear. As and when sound is not felt, note the

mercury level in the manometer.Pump a litter more air and again note the

proper arterial sound to reappear. This would be the systolic pressure, now

loose the screw, remove all air and open the cuff and keep the apparatus in

a safe place. The difference in a pressure between systole and diastole is

called the pulse pressure which is normally 30-35 mm hg. The lower limit

systole pressure in a normal adult is estimated about 105 mm Hg and the

upper limit about 150 mm Hg. In women the blood pressure is from 5 to 10

mm Hg less than in man.

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REVIEW QUESTIONS:

1. What are the benefits of monitoring blood pressure?

2. What are the home remedies for controlling high blood pressure?

3. Why do we use mercury in a sphygmomanometer even though it is

toxic to our body?

Ex. No:7

Date:

ESTIMATION OF HAEMOGLOBIN

BACKGROUND:

The apparatus consists of haemeter having haemoglobin pipette, glass

stirrers and a dropper.

Haemometer Housing:

This is a chamber with 3 compartments and is open on oneside and

closed behind with an opaque glass plate. The central compartment holds a

Hn flux which can be inserted and removed on eitherside of this

compartment 2 vertical tubes are present that are fixed. The Hb tube is

graduated on one side with gm % one side and on the other side % alone.

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Pipette and Stirrer:

The pipette is known as sucking pipette. It is having a capillary pore

and marker on the top as 20 micro litre. The blood sample is sucked upto

this mark. The glass stirrer has a flattened end and is used for mixing blood

and acid in the Hb-tube.

AIM:

To determine the percentage of haemoglobin in human blood sample.

PRINCIPLE:

To estimate the percentage of haemoglobin a define quality of

Haemoglobin (Hb) is converted to acid haematin by addition of 0.1 N

hydrochloric acid and resulting brown color is compared with standard

brown glass reference blocks of a haemometer.

MATERIAL REQUIRED:

Haldon’s haemometer

haemoglobin pipette

blood sample

Glass rod

REAGENT:

N/10 Hcl

METHOD:

Haemoglobinometer has a graduated tube or dilution tube which may

be round or square shaped and standard light brown glass plate rod.

Usually haemometer with square meter or glass rod is used. The

haemoglobin pipette has uniform diameter and 20 cubic meter marked on it.

The graduated haemoglobin tube was sterilized and picked with sterilized

needle up to 20mm3. Blood was poured into the haemoglobin tube already

containing N/10 Hcl. They prevent the production air bubbles. The mixture

is stirred well with the glass rod and the preparation is left for 10 minutes.

The haemoglobin of the sample blood is converted into acid haematin. The

mixture is diluted by N/10 Hcl is added drop into the haemometer till the

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color matches with that by drop of standard brown color glass rod. The

reading of haemoglobin tube showing percentage of haemoglobin is noted.

DISCUSSION:

REVIEW QUESTIONS:

1. Write the composition of blood and functions of blood.

2. Can a healthy diet and nutrition help keep optimal hemoglobin levels?

Ex. No:8

Date:

ACTION OF SALIVARY AMYLASE IN RELATION TO ENZYME

CONCENTRATION

BACKGROUND:

Saliva mixes up with the food and helps its digestion. That is, the

enzyme ptyalin or amylase present in human saliva hydrolyzes the big

molecules of food into many molecules. For example starch into mono-

saccnaricies maltose and glucose; proteins into amino acids and fats into

fatty acids and glycerol. Thus saliva not only helps in digestion of food but

convert it into energy generating substances. Further, enzymes and their

activity are very sensitive to temperature and pH. Even a slight variation in

these two factors, can disturb the action of enzymes. In other words,

digestion of food by salivary amylase is also effected by pH and temperature

and can be verified experimentally. For example, hydrolysis of starch can be

verified by testing it with iodine solution. Starch forms blue colored complex

with iodine. If no starch is present in a system it will not give blue color with

iodine.

AIM:

To determine amylase activity of human saliva in relation to enzyme

concentration.

MATERIALS:

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31

Test tubes

Stop watch

Thermometer

Pipette

Porcelain tile

Glass rod

Iodine

PRINCIPLE:

The enzyme salivary amylase is present in saliva and is responsible for the

partial digestion by facilitating the formation of easy absorbable amylase

also known as ptyalin. Amylase activity can be studied by time taken for the

digestion of standard starch solution. When digestion is proceeding starch is

hydrolyzed to dextrin and the color produced by iodine is blue. It slowly

changes to reddish violet, brownish violet brown and finally the iodine color.

This point is called acromic point and time taken for complete hydrolysis of

known amount of starch by a known strength of enzyme is the measure of

amylase activity. First product of the action of the enzyme amylase in the

substrate. Starch is the formation of an intensive blue color in combination

with summarized as follows.

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32

PROCEDUR

E:

Mouth is washed thoroughly with water and about 5 ml of saliva is

collected in a clean dry test tube. 1 ml of starch is taken in a test tube and a

drop of iodine is added. The starch gives blue color. To this mixture 1ml of

25% saliva is added and the stop clock is switched on. The test tube is

continuously shaken till the blue color is disappeared. At the time of

disappearance of blue color (achromic point) the stop clock is switched off

and the time taken is noted. The same procedure is repeated for various

enzyme concentrations like 50%, 75% and 100%. Tabulate the results and

draw a graph marking the enzyme concentration in “X” axis and the rate of

activity in “Y” axis. Calculate the Q10 value.

TABULATION:

S. No Enzyme

concentration

Time taken

in seconds

Rate of

activity(1/t)

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33

RESULT:

The rate of digestion of different concentration of enzymes

25%=

50%=

75%=

100%=

DISCUSSION:

REVIEW QUESTIONS:

1. What is an achromic point?

2. What are the functions of the salivary enzyme amylase during

digestion?

Ex. No:9

Date:

ACTION OF SALIVARY AMYLASE IN RELATION TO

TEMPERATURE

BACKGROUND:

All enzymes are proteinaceous in nature. At a lower temperature, the

enzyme salivary amylase is deactivated and at the higher temperature, the

enzyme is denaturated. Therefore, more time will be taken by an enzyme to

digest the starch at lower and higher temperatures. Optimum temperature

for the enzymatic activity of salivary amylase ranges from 32 °C to 37 °C.

The optimum temperature means that the temperature at which the enzyme

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34

shows the maximum activity. At this optimum temperature, the enzyme is

most active and hence, takes less time to digest the starch.

AIM:

To determine amylase activity of human saliva in relation to

temperature.

MATERIALS:

Test tubes

Stop watch

Thermometer

Pipette

Porcelain tile

Glass rod

Iodine and starch

PROCEDURE:

5ml of saliva is collected in a clean beaker. In a test tube 3 ml of 1%

starch solution is taken. The test is immersed in water bath in a beaker. The

temperature of water bath is noted. A drop of iodine is added in the test tube

after adding 1ml of saliva. The color change is noted. The stop clock is

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35

switched on at the time of introducing enzyme (saliva). At the achromic

point, the stop watch is stopped and the time taken for the complete

digestion is recorded. This indicates the stage in which all the starch is

completely

hydrolyzed

by amylase

at room

temperature

of 30˚c. Thus

the

experiment

is repeated

with different temperature (25 ˚c, 30 ˚c, and 35˚c). Tabulate the results and

draw a graph marking temperature in “X” axis and the rate of activity in “Y”

axis. Calculate the Q10 value.

S. No Temperature Time taken

in seconds

Rate of

activity(1/t)

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36

Tabulation:

FORMULA:

Q10=K2/K1* 10/t2-t1

T= Time taken in seconds

t2= Higher temperature

t1= Lower temperature

K2= Rate of activity at higher temperature

K1= Rate of activity at lower temperature

RESULTS:

The rate of digestion at

25 ˚c=

30 ˚c=

35˚c=

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37

Q10=

DISCUSSION

REVIEW QUESTIONS:

1. The experiment set up to study the effect of temperature on the

activity of salivary amylase on starch is carried out at 10 °C. The

solution mixture that contains amylase and starch keeps on giving

blue color for iodine test about half an hour. What is the reason for

this?

2. What is the optimum temperature for the enzymatic activity of salivary

amylase?

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Ex. No:10

Date:

COUNTING OF DIFFERENT KINDS OF BLOOD CELLS USING

HAEMOCYTOMETER

AIM:

To count the RBC and WBC of human blood sample.

PRINCIPLE:

Whole blood is diluted with a 3% acetic acid solution, which

hemolyzes mature erythrocytes and facilitates leukocyte counting. The

standard dilution for leukocyte counts is 1:20. This dilution is prepared

using the leukocyte Unopette system. The dilution is mixed well and

incubated to permit lysis of the erythrocytes. Following the incubation

period, the dilution is mounted on a hemacytometer. The cells are allowed to

settle and then are counted in specific areas of the hemacytometer chamber

under the microscope. The number of leukocytes are calculated per µL (x

109/L) of blood.

MATERIALS:

Haemocytometer

Pipette

Counting chamber

Compound microscope

REAGENTS:

Dilution fluid (Haem’s solution) and 15% acetic acid.

PROCEDURE:

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39

Finger tips and pins were sterilized carefully by 70% alcohol. When it

becomes dry, finger is punctured to allow a free flow of blood the tip of the

pipette is place over the blood and sucking up to 0.5 mark in the RBC

pipette. The tip of the pipette is wiped out with a piece of clean cloth and is

immediately placed in the dilution fluid and it is sucked until the mark

shake the pipette well to ensure uniform suspension of cells mean while a

coverslip is placed on the counting chamber.After discarding 3 to 4 drops of

diluted blood. The blood from the pipette is placed on the raised center of

the counting chamber at the edge of the coverslip. So that a drop is drawn

under the coverslip by capillary action.

After 5 minutes the counting chamber is placed under high power

microscope and adjusted in such a way that squares can be seen clearly.

Red blood corpuscles were counted for WBC another pipette having the

white blood is taken. Similar to RBC counting of the blood cells the blood is

drown up to 5 marks and diluted to 1.1 using 1.5% acetic acid as a dilution

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40

fluid. The diluted blood is placed in the counting chamber focused in low

power microscope. The WBC corpuscles were seen as blank spots and they

were seen as black spots and they were counted in the four corners of the

square.

CALCULATION:

RBC COUNTING

Total RBC/mm3 = Number of RBC counted × Dilution factor × Depth factor

No. of chambers counted

WBC COUNTING

Total WBC/mm3 = Number of WBC counted × dilution factor × depth factor

No. of chambers counted

RESULT:

No. of RBC in one cubic mm………………………../mm3

No. of WBC in one cubic mm…………………/mm3

DISCUSSION:

REVIEW QUESTIONS:

1. Which are the different dyes used to differentiate between viable and

non-viable cells?

2. Explain the different cell counting techniques available other than

Haemocytometer.

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LAB EXPERIMENT-

ANIMAL

BIOTECHNOLOGY

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42

Ex. No: 11

Date:

ISOLATION OF GENOMIC DNA FROM E. coli

AIM:

To isolate the genomic DNA from E .coli cells.

PRINCIPLE:

The isolation and purification of DNA from cells is one of the most

common procedures in contemporary molecular biology and embodies a

transition from cell biology to the molecular biology (from in vivo to in vitro).

The isolation of DNA from bacteria is a relatively simple process. The

organism to be used should be grown in a favorable medium at anoptimal

temperature, and should be harvested in late log to early stationary phase

for maximum yield. The genomic DNA isolation needs to separate total DNA

from RNA, protein, lipid, etc. Initially the cell membranes must be disrupted

in order to release the DNA in the extraction buffer. SDS (sodium dodecyl

sulphate) is used to disrupt the cell membrane. Once cell is disrupted, the

endogenous nucleases tend to cause extensive hydrolysis. Nucleases

apparently present on human fingertips are notorious for causing spurious

degradation of nucleic acids during purification. DNA can be protected from

endogenous nucleases by chelating Mg2++ ions using EDTA. Mg2++ ion is

considered as a necessary cofactor for action of most of the nucleases.

Nucleoprotein interactions are disrupted with SDS, phenol or proteinase K.

Proteinase enzyme is used to degrade the proteins in the disrupted cell

soup. Phenol and chloroform are used to denature and separate proteins

from DNA. Chloroform is also a protein denaturant, which stabilizes the

rather unstable boundary between an aqueous phase and pure phenol layer.

The denatured proteins form a layer at the interface between the aqueous

and the organic phases which are removed by centrifugation. DNA released

from disrupted cells is precipitated by cold absolute ethanol or isopropanol.

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43

MATERIALS REQUIRED:

LB Broth, E. coli cells

REAGENTS

TE buffer (pH 8.0)

10% SDS

Proteinase K

Phenol-chloroform mixture

5M Sodium Acetate (pH 5.2)

Isopropanol

70% ethanol

Autoclaved Distilled Water

Eppendorf tubes 2 ml

Micropipette & Microtips

Microfuge

PROCEDURE:

1. 2 ml overnight culture is taken and the cells are harvested

bycentrifugation for 10 minutes

2. About 500 μl of TE buffer is added to the cell pellet and the cells

areresuspended in the buffer by gentle mixing.

3. 100 μl of 10% SDS and 5 μl of Proteinase K are added to the cells.

4. The above mixture is mixed well and incubated at 37º C for an hour inan

incubator.

5. 1 ml of phenol-chloroform mixture is added to the contents, mixedwell by

inverting and incubated at room temperature for 5 minutes.

6. The contents are centrifuged at 10,000 rpm for 10 minutes at 4º C.

7. The highly viscous jelly like supernatant is collected using cut tipsand is

transferred to a fresh tube.

8. The process is repeated once again with phenol-chloroform mixtureand

the supernatant is collected in a fresh tube.

9. 100 μl of 5M sodium acetate is added to the contents and is mixedgently.

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44

10. 2 ml of isopropanol is added and mixed gently by inversion till white

strands of DNA precipitates out.

11. The contents are centrifuged at 5,000 rpm for 10 minutes.

12. The supernatant is removed and 1ml 70% ethanol is added.

13. The above contents are centrifuged at 5,000 rpm for 10 minutes.

14. After air drying for 5 minutes 200 μl of TE buffer or distilled water

isadded.

15. 10 μl of DNA sample is taken and is diluted to 1 or 2 ml with

distilledwater.

16. The concentration of DNA is determined using a spectrophotometer at

260/280 nm.

17. The remaining samples are stored for further experiments.

RESULTS:

DISCUSSION:

REVIEW QUESTIONS:

1. Can I use a microscope to see the DNA that I extract?

2. Why must we add the proteinase K enzymes to the mixture in order to

extract the DNA?

3. Why does the DNA clump together?

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45

Ex. No: 12

Date:

ESTIMATION OF PROTEIN BY LOWRY’S METHOD

AIM:

To estimate the amount of protein in the given sample by Lowry’s method.

PRINCIPLE:

The method is based on both the Biuret reaction, where the peptide

bonds of proteins react with copper under alkaline conditions producing

Cu+, which reacts with the Folin reagent, and the Folin-Ciocalteau reaction,

which is poorly understood but in essence phosphomolybdotungstate is

reduced to heteropolymolybdenum blue by the copper-catalyzed oxidation of

aromatic amino acids. The reactions result in a strong blue color, which

depends partly on the tyrosine and tryptophan content. The Lowry method

is sensitive to pH changes and therefore the pH of assay solution should be

maintained at 10 - 10.5. . The Lowry method is sensitive to low

concentrations of protein.

REAGENTS:

A. 2% Na2CO3 in 0.1 N NaOH

B. 1% NaK Tartrate in H2O

C. 0.5% CuSO4.5 H2O in H2O

D. Reagent I: 48 ml of A, 1 ml of B, 1 ml C

E. Reagent II- 1 part Folin-Phenol [2 N]: 1 part water.

PROCEDURE:

1. Different dilutions of BSA solutions are prepared by mixing stock BSA

solution (1 mg/ ml) and water in the test tube as given in the table. The

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46

final volume in each of the test tubes is 5 ml. The BSA range is 0.1 to 0.5

mg/ ml.

2. From these different dilutions, pipette out 5.5 ml reagent I to different

test tubes .Mix the solutions well.

3. This solution is incubated at room temperature for 10 mins.

4. Then add 0.5 ml of reagent II to each tube and incubate for 30 min. Zero

the colorimeter with blank and take the optical density (measure the

absorbance) at 660 nm.

5. Plot the absorbance against protein concentration to get a standard

calibration curve.

6. Check the absorbance of unknown sample and determine the

concentration of the unknown sample using the standard curve plotted

above.

Tabulation:

S.No Vol. of

BSA (ml)

Conc of

BSA

(mg/ml)

Vol. of

Distilled

water

(ml)

Vol. of

reagent

I (ml)

Incu

bati

on

for

10

min

Vol. of

Reagent

II (ml)

Incu

bati

on

for

30

min

OD At

660nm

1. 0.1 100 3.9 5.5 0.5

2. 0.2 200 3.8 5.5 0.5

3. 0.3 300 3.7 5.5 0.5

4. 0.4 400 3.6 5.5 0.5

5. 0.5 500 3.5 5.5 0.5

6. Unknown 100 3.9 5.5 0.5

7. Blank 0 4 5.5 0.5

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47

Calculations:

Result:

The amount of protein present in the given sample was found to be …………

Review Questions:

1. Explain the principle behind lowry’s method?

2. Beer-Lamberts law.

3. Compare Lowry’s method with other methods of protein estimation.

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SPOTTERS

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49

Content

1. Glucose

2. Fructose

3. Glycogen

4. Sucrose

5. Amino acids

6. Cholesterol

7. Intestinal villi

8. Haemoglobin

9. ECG

10. Sphygmomanometer

11. Haemometer

12. Haemocytometer

13. Kymograph

14. Cardiac Muscle

15. Striated & Non striated muscle

16. Simple muscle Twitch

17. PBR 322

18. Plasmid

19. Lambda phage

20. Recombinant DNA

21. Gene cloning

22. Southern blotting

23. Stem cells

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24. RFLP

25. Dolly

26. Transgenesis

27. Animal cloning

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Glucose

Glucose

1. The most common carbohydrate is glucose (C6H12O6).

2. Glucose is a monosaccharide, an aldohexose and a reducing sugar.

3. Glucose contains six carbon atoms and an aldehyde group.

4. Glucose exists as D-(+)-glucose and L-(-)-glucose.

5. The D-(+)-glucose form is used as fuel by your body and is also

called dextrose.

6. L-(-)-glucose cannot be used by your body as a source of energy.

7. Glucose is a white, sweet-tasting powder, so it can be used as a

sweetener.

8. Glucose is one of the products of photosynthesis in plants and

some prokaryotes.

9. In animals and fungi, glucose is the result of the breakdown of

glycogen but in plants the breakdown substrate is starch.

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10. Glucose is found in the human bloodstream where it is referred to

as "blood sugar".

11. The first step in the breakdown of glucose in all cells is glycolysis,

producing pyruvate which is the starting point for all other

processes in cellular respiration.

12. A major part of the use of the energy from glucose oxidation is the

conversion of ADP to ATP, with the energy-rich molecule ATP

being subsequently used as the energy currency of the cell.

Fructose

Fructose

1. Fructose (or levulose) is a simple sugar (monosaccharide) with the

same chemical formula as glucose (C6H12O6) but a different atomic

arrangement.

2. Sources of fructose include honey, fruits, and some root vegetables.

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3. Fructose is also known as Fruit sugar, levulose, D-fructofuranose,

D-fructose, D-arabino-hexulose.

4. The D-fructose is the most predominant isomer in nature

compared to L-fructose.

5. It is the most reactive and most water soluble sugar compared to

other natural sugars.

6. Fructose is a 6-carbon keto sugar and also known as D-

fructopyranose.

7. Fructose is not a product of photosynthesis.

8. Fructose is produced commercially from sugarcane, sugar beets,

and corn.

9. Fructose is difficult to crystallize from an aqueous solution

compared to glucose.

10. Fructose is mainly important for beverage industries and bakery

products because it contributes to enhancing palatability and taste,

and for browning or color development.

Sucrose

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Sucrose

1. Sucrose is a disaccharide (glucose + fructose) with the molecular

formula C12H22O11.

2. Sucrose is a non- reducing sugar in which alpha glucose is linked

to fructo furanose by a glycosidic link.

3. Sucrose is fine and colorless. It is odor-free and is a crystalline

powder with a sweet taste

4. It is best known for its role in human nutrition and is formed by

plants but not by higher animals.

5. Sucrose is soluble in water with melting point 180° C.

6. Sucrose is heated above its melting point, it forms a brown

substance known as caramel.

7. Hydrolysis of sucrose yields D-glucose and D-fructose

Sucrose + water =hydrolysis=> Glucose + Fructose

C12H22O11 + H2O =hydrolysis=> C6H12O6 + C6H12O6

8. Sucrose has the ability to dissolve in water and form crystals when

heated properly.

9. Sucrose is too large to cross cell membranes.

10. So our body break down the large molecule in to glucose and

fructose with an assistance of enzyme sucrose and the process

called hydrolysis.

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11. The bacterial metabolism of sucrose can cause abdominal

cramping, bloating, constipation and diarrhea.

Amino Acids

Amino Acids

1. Amino acids are the building blocks of proteins, each one

corresponding to one or more DNA codon.

2. The physical and chemical properties of a protein are determined by

its constituent amino acids.

3. They consist of an amine group, a carboxylic acid group, a hydrogen

and a group unique to each residue around a central carbon atom.

4. Amino acids are forming a peptide bond between the amine group of

one amino acid and the carboxyl group of the next.

5. Amino acids are more soluble in water than they are in ether,

dichloromethane, and other common organic solvents.

6. In a polypeptide chain, the end with the free amine group is called the

N-terminus and the end with the free carboxylic acid the C-terminus.

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7. They can be classified according to the core structural functional

groups' locations as alpha- (α-), beta- (β-), gamma- (γ-) or delta- (δ-)

amino acids.

8. Humans can synthesize about half of the amino acids needed to make

proteins. Other amino acids, called the essential amino acids, must be

provided in the diet.

9. Amino acids have high melting points, generally over 200 °C.

10. All natural amino acids are L‐amino acids.

11. Essential Amino Acids: Histidine, Isoleucine, Leucine, Lysine,

Methionine, Phenylalanine, Threonine, Tryptophan, and Valine.

12. Nonessential Amino Acids: Alanine, Asparagine, Aspartic Acid,

Glutamic Acid.

13. Conditional Amino Acids: Arginine (essential in children, not in

adults), Cysteine, Glutamine, Glycine, Proline, Serine, and Tyrosine.

14. classification depends on the side chain structure, and experts

recognize 5 types in this classification:

Containing sulfur (Cysteine and Methionine)

Neutral (Asparagine, Serine, Threonine, and Glutamine)

Acidic (Glutamic acid and Aspartic acid) and basic (Arginine and

Lysine)

Alphatic (these include Leucine, Isoleucine, Glycine, Valine, and

Alanine)

Aromatic (these include Phenylalanine, Tryptophan, and Tyrosine)

Cholesterol

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57

Cholesterol

1. Cholesterol is a sterol and a lipid found in the cell membranes of all

body tissues.

2. It is transported in the blood plasma of all animals.

3. Its molecular formula is C27H46O.

4. Its pure state it is a white, crystalline substance that is odourless and

tasteless.

5. Cholesterol is present in higher concentrations in tissues or densely

packed membranes, for example, the liver, spinal cord and brain.

6. Cholesterol is required to build and maintain cell membranes and it

makes the membrane's fluidity, degree of viscosity and stable over

wider temperature.

7. Cholesterol also serves as a precursor for the biosynthesis of steroid

hormones and bile acids.

8. High levels of cholesterol in the bloodstream will cause

atherosclerosis.

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9. Cholesterol is insoluble in the blood; it must be attached to certain

protein complexes called lipoproteins in order to be transported

through the bloodstream.

Glycogen

1. Glycogen is a homo polysaccharide.

2. Glycogen is a polymer of glucose residues in the main chains are

connected by α (1→4) glycosidic bonds.

3. The branches are attached by α (1→6) glycosidic linkages.

4. It is a major reserve carbohydrates in animals. So it is called as

animal starch.

5. It is a white powder, readily dissolves in water.

6. Glycogen is a large molecule produced in the liver and stored

mainly in the liver and muscle cells.

7. Glycogen is the analogue of starch, a glucose polymer that

functions as energy storage in plants.

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59

8. It is a non-reducing sugar. It gives red color with iodine. The red

color disappears on boiling and reappears on cooling.

9. The blood always contains 1% glucose. When it exceeds 1% the

excess glucose is transported to the liver and is converted into

glycogen. This process is called glycogenesis.

10. When blood sugar level is below 1% the liver glycogen is changed

into blood glucose. This process is called glycogenolysis.

11. Muscle glycogen is utilized as the energy source during muscle

contraction.

Intestinal Villi

Intestinal Villi

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60

1. The wall of the small intestine contains millions of fingerlike

projections called villi.

2. Their fingerlike shape greatly increases the surface area of the

intestine and increase the overall rate of absorption.

3. The villi and intestinal walls are richly supplied with blood vessels

and lymphatic vessels to carry away absorbed food substances.

4. Each villus transports nutrients to a network of capillaries and fine

lymphatic vessels called lacteals close to its surface.

5. They have very thin walls, only one cell thick, this enables molecules

to pass through easily.

6. The villi also have digestive enzymes on their surface.

7. Digested food passes into the villi through diffusion.

8. The villi are connected to blood vessels to allow nutrients to be

carried away by the blood.

9. Villi also help the food to move along the digestive tract.

10. . Villus capillaries collect the simple sugars and amino acids into the

bloodstream.

Hemoglobin

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Hemoglobin

1. Hemoglobin is the oxygen binding protein of red blood cells

2. It is a globular protein with quaternary structure.

3. A hemoglobin molecule is composed of a globin protein group and

four heme groups.

4. Each RBC contains over 600 million hemoglobin molecules.

5. Each heam group associated with one Fe2+ atom.

6. Each hemoglobin molecule can bind 4 oxygen molecules.

7. The heme molecules give hemoglobin its red color.

8. Hemoglobin consists of four polypeptide subunits are 2 alpha chains

and two beta chains.

9. Hemoglobin transports oxygen in the blood from the lungs to the

rest of the body.

10. Hemoglobin develops in cells in the bone marrow that become red

blood cells.

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62

11. During phagocytosis globin protein is broken down to amino acids,

which are recycled into new proteins and the heme is broken down

into Iron, Biliverdin and Carbon Monoxide.

12. Hemoglobin plays an important role in the modulation of

erythrocyte metabolism.

Electrocardiogram

Electrocardiogram

1. An electrocardiogram is abbreviated as EKG or ECG.

2. The electrocardiogram can measure the rate and rhythm of the

heartbeat, as well as provide indirect evidence of blood flow to the

heart muscle.

3. The ECG as a graph, plotting electrical activity on the vertical axis

against time on the horizontal axis.

4. Standard ECG paper moves at 25 mm per second during real-time

recording.

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63

5. ECG paper is marked with a grid of small and large squares. Each

small square represents 40 milliseconds (ms) in time along the

horizontal axis and each larger square contains 5 small squares, thus

representing 200 ms.

6. Standard paper speeds and square markings allow easy measurement

of cardiac timing intervals. This enables calculation of heart rates and

identification of abnormal electrical conduction within the heart

7. The first electrical signal on a normal ECG originates from the atria

and is known as the P wave.

8. Depolarisation of the ventricles results in usually the largest part of

the ECG signal and this is known as the QRS complex.

9. The Q wave is the first initial downward deflection

10. The R wave is then the next upward deflection.

11. The S wave is then the next downward deflection.

12. ST segment and the T wave electrical signal reflecting repolarisation

of the myocardium.

13. Doctors use ECGs to detect and study many heart problems, such as

heart attacks, arrhythmias and heart failure.

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Sphygmomanometer

Sphygmomanometer

1. A sphygmomanometer is a device that measures blood pressure.

There are two types of sphygmomanometers:

Manometric

Digital.

2. A manometric sphygmomanometer is the old-fashioned blood

pressure-measuring device. It is the more accurate of the two types of

sphygmomanometers.

3. A digital sphygmomanometer uses digital readouts. With this type of

sphygmomanometer, the blood pressure reading appears on a small

screen or is signaled in beeps.

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65

4. A sphygmomanometer usually consists of a:

A rubber bag surrounded by a cuff.

A manometer (usually a mechanical gauge, sometimes

electronic, rarely a mercury column).

An inflating bulb to elevate the pressure.

A deflating valve.

5. To measure blood pressure, the cuff is wrapped around the arm and

then inflated using the pump. The pressure applied by the cuff closes

off the brachial artery so that no blood flows through.

6. The pressure is then slowly released and sounds are detected using a

stethoscope placed on the brachial artery.

7. Sphygmomanometer is kept at the level of heart of the subject and

cuff is wrapped around the upper arm just above the elbow.

8. The chest piece of the stethoscope is placed upon the brachial artery.

9. The other ends of the stethoscope are connected with two ears.

10. The bag of the cuff is filled by the pump up to 240 mm Hg. pressure.

11. The pressure inside the cuff is released slowly by losing the air with

the air adjustment screw.

12. As the pressure is released sudden appearance and disappearance of a

sound is heard and recorded.

13. Sudden onset of trapping sound is systolic blood pressure and the

sudden disappearance of sound is diastolic pressure.

14. Blood pressure readings are given as a fraction of two numbers,

120/80 mm Hg.

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Haemometer

1. Haemometer is an apparatus used for the estimation of blood

haemoglobin. It is otherwise called as haemoglobinometer.

2. It consists of a chamber and a capillary pipette. The chamber contains

three test tubes held against a black background.

3. The two lateral tubes are filled with standard acid haematin and are

sealed. They are called comparison tubes.

4. The central tube is graduated and is called experimental tube.

5. The experimental tube is graduated and is called experimental tube.

6. The experimental tube is graduated from 2 to 22gm% on one side and

form 10 to 140gm% on the other side.

7. This tube has a glass rod to stir the blood when it is mixed with Hcl.

8. The capillary pipette is called Pasteur pipette. It is marked with 20

cu.mm. It is connected to a sucking rubber tube.

9. There is a small bottle to take N/10 Hcl and cleaning brush.

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10. To estimate haemoglobin the experimental tube is filled up to the

level of 2 gm. with N/10 Hcl.

11. The finger is picked with the needle and blood is sucked into the

capillary pipette up to the level of 20 cubic mm. the blood is poured

into the experimental tube.

12. The blood is mixed with Hcl by sucking and releasing with the pipette

several times.

13. Allow 5 minutes to complete the reaction.

14. The red color of blood changes to brown indicating the formation of

acid haematin.

15. Now start diluting acid haematin by adding distilled water drop by

drop with the help of a dropper till the brown color matches the

standard solution color.

16. The result was observed in bright sunshine.

17. The amount of haemoglobin is represented in g%. It is the measure of

the height of the solution in the experimental tube.

18. The normal level of haemoglobin is 12g%.

Haemocytometer

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Haemocytometer

1. The haemocytometer was originally invented by Louis-Charles

Malassez to count blood cells.

2. A haemocytometer has two chambers areas separated by an H-shaped

moat and each chamber has a microscopic grid etched on the glass

surface.

3. The chambers are overlaid with a glass coverslip that rests on pillars

exactly 0.1 mm above the chamber floor.

4. These two squares are identical and each has a total area of 9 mm2 (1

mm on each side).

5. These squares are divided into nine primary squares with an area of

1mm2.

6. The four corner primary squares are used when counting leukocytes.

7. These 4 large corner squares contain 16 smaller secondary squares,

each with an area of 0.04 mm2.

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8. All 25 secondary squares of the center primary square are used to

count platelets.

9. The raised edges of the haemocytometer hold the coverslip 0.1 mm

off the marked grid, giving each square a defined volume.

10. The distance between the bottom of the coverslip and the surface of

the counting area of the chamber is 0.1 mm

Kymograph

1. A kymograph is a device that graphically records changes in position

over time.

2. This instrument was invented in the 1840s by German physiologist

Carl Ludwig.

3. The kymograph has been used most commonly in the field of

medicine to study various physiological and muscular processes, for

example blood pressure, respiration and muscle contractions.

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4. This instrument consists of a motor, a central rod, a rotating drum, a

stand, a battery, a switch and an induction coil.

5. The muscle is suspended from the clamp of a stand.

6. The free end of the muscle is tied with a lever. The lever has a pointer

which is directed to the rotating drum.

7. A battery supplies the electric current which acts as a stimulus.

8. The current passes through an induction coil.

9. A smoked paper is pasted on the rotating drum.

10. A clockwork or electric motor drives the drum, rotating it slowly.

11. The stylus traces a graphic record on a piece of paper wrapped around

the drum.

12. The two terminals of the wires coming out from the induction coil are

connected to the two ends of the muscle (ex. Frog thigh muscle).

13. When an electric shock is given, the muscle contracts and hence

shortens.

14. As a result, the pointer moves up and down makes a lines on the

smoked paper of the moving drum.

15. The graphic record generated by the kymograph instrument is

commonly translated into a graph, showing changes in pressure or

motion on the horizontal x-axis, and time elapsed on the vertical y-

axis.

Cardiac muscle

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Cardiac muscle

1. Cardiac muscle (heart muscle) is involuntary striated muscle.

2. It is found in the walls and histological foundation of the heart.

3. Cardiac muscle fibres are essentially long, cylindrical cells with one

nuclei.

4. The arrangement of actin and myosin is similar to skeletal

striated muscle.

5. Intercalated disks are located between cardiac muscles cells.

6. The intercalated disks form tight junctions between the cells so that

they cannot separate under the strain of pumping blood.

7. The cardiac muscles are autorhythmic because they contract

independently of the nervous system and has an intrinsic rhythm.

8. The muscle fibres are uninucleate and do not have a sarcolemma.

9. The cytoplasm consists of a large number of mitochondria and

numerous glycogen granules.

10. They have a stable resting membrane potential of -90 mV. It has a

prolonged action potential.

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11. Millions of cardiac muscle cells working together are easily able to

pump all of the blood in the body through the heart in less than a

minute.

Striated Muscle

Striated Muscle

1. Skeletal muscle is called "striated" because of its appearance

consisting of light and dark bands visible using a light microscope.

2. Skeletal muscle, also called voluntary muscle in vertebrates.

3. A single skeletal muscle cell is long and approximately cylindrical in

shape, with many nuclei located at the edges of the cell.

4. A skeletal muscle fiber is around 20-100 µm thick and up to 20 cm

long.

5. It is a form of striated muscle tissue which is under the voluntary

control of the somatic nervous system.

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6. Most skeletal muscles are attached to bones by bundles of collagen

fibres known as tendons.

7. They have number of glycogen granules and mitochondria.

8. The most striking feature of the striated muscle fibre is the presence

of alternating dark and light transverse bands called stripes or

striations.

9. The dark bands are called anisotropic or A bands.

10. Each A band has at its middle a light zone called the H zone or

Henson's line.

11. Skeletal muscle fibres are bound together by connective tissue and

communicate with nerves and blood vessels.

12. The lighter band is isotropic and is called the I band.

13. Each I band has at its centre a dark line called the membrane of

Krause or Z line or Z band.

14. Myofilaments are composed of thick (myosin) and thin (actin)

filaments, which interact to cause muscle contractions.

Non-Striated muscle

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Non-Striated muscle

1. Smooth muscle are also called non-striated or non-straight muscles.

2. The muscle fibres are made up of long narrow spindle shaped cells

that are generally shorter than striated muscle cells.

3. They average a length of about 0.2 mm.

4. Each muscle fibre has a single nucleus in the central thick portion.

5. The sarcoplasm consists of a number of parallely arranged myofibrils.

6. The walls of blood vessels, the tubes of the digestive system, and the

tubes of the reproductive systems are composed primarily of smooth

muscle.

7. Contractions of smooth muscle move food through the digestive

tracts and push blood through the blood vessels.

8. The muscle cells are not bound by a true sarcolemma.

9. Smooth muscle fibres may occur individually or in the form of

bundles of sheets.

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10. The muscle fibres of viscera are usually arranged in the form of

sheets made up of many layers of fibres.

11. In villi of the small intestine the muscle fibres occur singly.

12. Smooth muscles undergo slow and rhythmic contraction regulated by

the autonomous nervous system. So they are called involuntary

muscles.

Simple Muscle Twitch

Simple Muscle Twitch

1. A muscle twitch is contraction of a muscle in response to a stimulus

that causes an action potential in one or more muscle fibres.

2. A twitch can last for a few milliseconds or 100 milliseconds,

depending on the muscle type.

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3. The tension produced by a single twitch can be measured by a

myogram, an instrument that measures the amount of tension

produced over time.

4. A simple twitch can be divided into a latent period, a contraction

phase, and a relaxation phase.

5. The latent period begins at stimulation and typically lasts about two

milliseconds.

6. The time it takes the muscle to react to the stimulus is called the

latent period.

7. The contraction period is the time where the muscle is actually

contracting and tension rises to a peak.

8. The last period is when the muscle length returns back to normal and

it continues for about another twenty-five milliseconds.

Plasmid pBR322

Plasmid pBR322

1. Plasmid pBR322 is one of the first multipurpose cloning vectors

constructed for use in Escherichia coli.

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2. It is cloning vector used for reproducing the DNA fragment.

3. pBR322 was the first artificial plasmid created by Mexicans Bolivar

and Rodriguez in 1977.

4. The name pBR denotes the p stands for "plasmid," and BR for "Bolivar"

and "Rodriguez."

5. pBR322 is 4363 base pairs in length and contains a replicon region

(source plasmid pMB1).

6. It has two antibiotic resistance genes like ampicillin (ampR) and

tetracycline (tetR).

7. The gene for ampicillin resistance are Pst I, Pvu I, and Sca I.

8. It have the gene for tetracycline resistance are BamH I, BspM I, EcoR

V, Nhe I, Nru I, Sal I, Sph I, and Xma III.

9. It contains the origin of replication of pMB1, and the rop gene, which

encodes a restrictor of plasmid copy number.

10. It also contains the unique EcoRI restriction site GAATTC and splices

the DNA between G and A from 5' to 3' position.

Ti plasmid

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Ti plasmid

1. Tumor inducing plasmid or Ti plasmid are double stranded circular

DNA molecule present in Agrobacterium tumefaciens.

2. Ti plasmids are classified based on the type of opines

(octopine and nopaline. ) they produce in the host cell during

infection.

3. Almost all Ti plasmids have identical structure except in their

sequence for opine metabolism.

4. The plasmid has 196 genes that code for 195 proteins.

5. Size of the plasmid is ~250 kbp and 206,479 nucleotides long, the GC

content is 56% and 81% of the material is coding genes.

6. It has T DNA which is of 20kb and in addition it has several genes

such as vir genes for virulence, ori gene for origin of

replication, tra genes for transfer and genes for opine synthesis.

7. Vir region contains eight operons they are Vir A, Vir B, Vir C, Vir D,

Vir E, Vir F, Vir G and Vir H which together span about 40kb of DNA.

8. Virulence genes are responsible for the transfer of T DNA into the

host cell and integration of T DNA with host genome.

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9. T DNA is region of Ti plasmids common to both octopine and

nopaline plasmids. But generally T DNA segment of Octopine

plasmids is shorter than in Nopaline plasmids.

10. Ti plasmids have a single repeated sequence at both ends of T DNA.

This sequence is called as the bordered sequence.

11. T DNA encode for the production of growth hormones

like Cytokinin and Auxin which is necessary for tumor induction.

12. Vir region is activated by the phenolic compounds, namely

Acetosyringone and alpha hydroxy acetosyringone produces by plant

wounds.

13. These bind to Vir A proteins activates Vir G gene by phosphorylation

which in turn activates other genes.

14. Vir D proteins together with Vir D proteins participate in the

formation of conjugal tube formation between the bacterial cell and

plant tissue during the infection process.

15. In transferring gene of interest to Ti plasmid, an intermediate vector

is used such as pBR 322. T DNA portion of the Ti plasmid is separated.

T DNA is inserted into the pBR 322 vector which results in formation

of ashuttle vector. This shuttle vector can replicate in E. coli and

in Agrobacterium.

16. Ti plasmids serve as ideal vectors for plant genetic engineering as it

has the capability of transferring gene of interest into the target site

with a high efficiency. It is easy to screen recombinant cells as marker

genes are present.

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Lambda phage

Lambda phage

1. Easter Lederberg discovered lambda phage in E.coli K12 strain in

1951.

2. Enterobacteria phage λ (lambda phage, coliphage λ) is a temperate

bacteriophage that infects Escherichia coli.

3. It belongs to a Group I, dsDNA phages, Order-Caudovirales, Family-

Siphoviridae, Genus- lambda like viruses and Species lambda phage.

4. A lambda phage has a head measuring around 50-60 nanometers in

diameter and a flexible tail that is around 150 nanometers long.

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5. The head functions as a capsid that contains its genome, which

contains 48,490 base pairs of double-stranded linear DNA.

6. The λ genome contains of

an origin of replication

genes for head and tail proteins

enzymes for DNA replication

gene for lysis and lysogeny cycle

single-stranded protruding cohesive ends of 12 bases

(5’GGGCGGCGACCT; the other end is complementary to it,

i.e., CCCGCCGCTGGA5′).

7. The single-stranded parts are known as sticky sites and are also called

the cos site, which encircles the DNA in the host cytoplasm.

8. They can have either lytic or lysogenic cycle, depending on the

environment.

9. The lysogenic cycle to the lytic cycle transformation is mainly

controlled by the proteins cI (also known as λ repressor) and Cro.

10. λ phages are commonly used in DNA cloning and it can be used to

clone up to 20-25 kb DNA.

Recombinant PBR322 (rDNA)

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1. One of the most notable plasmids, termed pBR322 after its

developers Bolivar and Rodriguez (pBR) pBR322.

2. pBR322 has sequences derived originally from three different

plasmids as follows:

The blaR gene from plasmid Rl, a typical antibiotic resistance

plasmid found in natural populations of E. coli.

The tet gene is derived from plasmid R6-5, another antibiotic

resistance plasmid.

The origin of replication from plasmid pMBl, which is a close

relative of plasmid ColEl.

3. The useful features of this vector are as follows:

Plasmid pBR322 has been completely sequenced.

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There are over 40 enzymes with unique cleavage sites on the

pBR322 genome.

Small size (-4.4 kb) enables easy purification and manipulation.

Two selectable markers (bla and tet) permit easy selection of

recombination DNA,

High copy number of 15 copies per cell, which

Can be amplified to up to 1,000 to 3,000 when protein synthesis is

blocked, e.g., by applying chloramphenicol.

Gene Cloning

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Gene Cloning

1. It is technique used in genetic engineering that involves the

identification, isolation and insertion of gene of interest into a vector

such as a plasmid or bacteriophage to form a recombinant DNA

molecule.

2. This technique is also used to produce large quantities of that desire

gene fragment or product encoded by that gene.

3. The major steps involved in cloning a gene are:

Step1: Identification and isolation of gene of interest (from

Genomic library, cDNA library, Chemical synthesis of gene).

Step II: joining of this gene into a suitable vector (construction

of recombinant DNA Eg: pBR 322)

I. In the process, restriction enzymes functions as scissors

for cutting DNA molecules.

II. Ligase enzyme is the joining enzyme that joins the

vector DNA with gene of interest.

III. The resulting DNA is called the recombinant DNA,

chimera or recombinant vector.

Step III: Introduction of this vector into a suitable organism

Introduction of recombinant vector into host cell is achieved by

different gene transfer methods like Electroporation,

Microinjection, Liposome mediated gene transfer etc.

Step VI: Selection of transformed recombinant cells with gene of

interest

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Test like antibiotic resistance, visible characters, assay for

biological activity are used to isolate the gene of interest.

Step V: Multiplication or expression of the gene of interest.

Southern Blotting

Southern Blotting

1. A Southern blot is a method used in molecular biology for

detection of a specific DNA sequence in DNA samples.

2. Southern blotting combines transfer of electrophoresis-separated

DNA fragments to a filter membrane and subsequent fragment

detection by probe hybridization.

3. The method is named after its inventor, the British biologist Edwin

Southern.

4. Southern blot are used in gene discovery and mapping, evolution

and development studies, diagnostics and forensics.

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Method:

Restriction endonucleases are used to cut high-molecular-weight

DNA strands into smaller fragments.

The DNA fragments are then electrophoresed on an agarose gel to

separate them by size.

Once separated, the fragments are denatured from double-stranded

to single-stranded form by treatment with sodium hydroxide

(NaOH).

After the denaturation step a positively charged nylon filter and a

stack of paper towels are placed atop the gel and fragments are

pulled towards the positively charged nylon by capillary action.

The membrane is then baked in a vacuum or regular oven at 80 °C

for 2 hours or exposed to ultraviolet radiation (nylon membrane)

to permanently attach the transferred DNA to the membrane.

The membrane is then exposed to a hybridization probe solution.

Hybridization of the probe to a specific DNA fragment on the filter

membrane indicates that this fragment contains DNA sequence

that is complementary to the probe.

Excess probe is washed off by reducing NaCl concentration.

Finally, the radio-labelled fragments are exposed to X rays film by

autoradiography.

The position of the fragments on the nylon sheet corresponds to

black bands where X-rays have been absorbed.

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STEM CELL

1. Stem cells are cells which can generate new copies of themselves,

and can turn into the more specialized cells (e.g. red blood cells)

that perform functions in the body.

2. There are different types of stem cells,

a. Some can turn into any cell in the body called pluripotent

stem cells.

b. Some can only turn into certain cells in one type of tissue

called tissue specific stem cells.

3. Adult and foetal stem cells are tissue specific, they only turn into

certain types of specialized cells.

4. We all have adult stem cells in many of our tissues which repair

and replenish damaged cells.

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5. The cells isolated from the embryo give rise to one cell line which

can produce an infinite number of cells.

6. Embryonic stem cells exist only briefly after fertilization.

7. Human embryonic stem cells are obtained from very early stage

embryos, within 5-6 days of fertilization.

8. Most embryos used in stem cell research were initially created for

use in IVF and are donated by parents.

9. All types of stem cell are used in basic research to understand how

our bodies work and develop, and to understand disease.

10. Blood from the umbilical cord, which is rich in stem cells, can be

stored indefinitely for use in later life. Cord blood can be donated

to public banks, or private companies offer storage for use by the

baby or his/her relatives in later life.

Restriction Fragment Length Polymorphism (RFLP)

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Restriction Fragment Length Polymorphism (RFLP) is a molecular

method of genetic analysis

It allows individuals to be identified based on unique patterns of

restriction enzyme cutting in specific regions of DNA.

For RFLP, the steps are:

1. Separate white and red blood cells with a centrifuge.

2. Extract DNA nuclei from the white blood cells.

3. Cut DNA strand into fragments using a restriction enzyme.

4. Place fragments into one end of a agarose gel.

5. Use an electric current to sort the DNA segments by length. This

process is called agarose gel electrophoresis .

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6. Use a sheet of nitrocellulose or nylon to blot the DNA.

7. The sheet is stained so the different lengths of DNA bands are

visible to the naked eye.

8. By treating the sheet with radiation, anautoradiograph is created.

9. This is an image on x-ray film left by the decay pattern of the

radiation.

10. The autoradiograph, with its distinctive dark-colored parallel

bands, is the DNA profile.

Some of the applications for RFLP analysis include:

DNA fingerprinting. Forensic scientists may use RFLP analysis to

identify suspects based on evidence samples collected at scenes of

crimes.

Paternity. RFLP is also used in the determination of paternity or for

tracing ancestry.

Genetic diversity. The technique can be used in studying evolution

and migration of wildlife, studying breeding patterns in animal

populations, and in the detection and diagnosis of certain diseases.

The technique of using RFLP detection of variation in genomes is a

vital tool in genome mapping and genetic disease analysis.

DOLLY

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1. Cloning is a process by which a genetically identical individual

organism is produced.

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2. Dolly the sheep was the first mammal to be cloned, not from a cell

taken from embryos, but from an adult cell.

3. Dolly was cloned by using a technique known as somatic cell

nuclear transfer (SCNT).

4. For cloning the steps :

Taking an oocyte (egg cell) and removing its nucleus.

Then the nucleus of a somatic (body) cell, which contains the

DNA to be cloned.

It is implanted into the egg cell from which the nucleus had

been removed.

5. The cell used as the donor for the cloning of Dolly was taken from

the mammary gland of a 6 years old Finn-Dorsetewe.

6. The unfertilized egg was taken from a Scottish Blackface ewe.

7. From 277 fertilized eggs, 29 early embryos developed. They were

planted into 13 surrogate mothers. Only one pregnancy went full

term resulting in the birth of Dolly on 5 July 1996.

8. Dolly was cloned at the Roslin Institute in Scotland by British

embryologist Ian Wilmut

9. Dolly lived her entire life at the Roslin Institute in Edinburgh,

Scotland.

10. Dolly was died on 14 February 2003 as she had developed a form of

lung cancer called Jaagsiekte and severe arthritis. The disease was

common in sheep kept indoors and Dolly had to be kept indoors

for security reasons.

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11. A Finn Dorset has a life expectancy of around 11 to 12 years but

Dolly lived for only 6.5 years.

12. Cloning may prove beneficial in saving endangered and newly

extinct species by resurrecting them from frozen tissue.

TRANSGENISIS

1. Transgenesis is a genetic engineering processes that remove genetic

material from one species of plant or animal and add it to a different

species.

2. The most common method for producing transgenic animals is gene

transfer by DNA microinjection, which involves the following steps:

DNA containing the desired transgene is identified and cloned

(copied tens of thousands of times in bacteria) before insertion into

the animal host.

The host animals (cows, pigs, or sheep) are induced to super

ovulate and their eggs are collected.

The eggs are fertilized in a laboratory dish.

Using a fine, hollow needle, a solution of DNA containing the

transgene is injected into the male pronucleus of the fertilized egg

(the nucleus of the sperm cell that entered the egg) before it fuses

with the female pronucleus.

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The transgenic embryos are grown in cell culture and then

implanted into the uterus of a surrogate mother, where they

complete their development.

Screening is performed to determine which of the offspring have

inherited the transgene.

3. Transgenic organisms have also been developed for commercial

purposes. Examples of transgenic organisms with commercial value:

4. Golden rice: modified rice that produces beta-carotene, the precursor

to vitamin A.

5. Goats modified to produce FDA-approved human antithrombin

(ATryn), which is used to treat a rare blood clotting disorder in

humans.

6. Goats have also been genetically modified to produce spider silk.

7. The main drawback of DNA microinjection is its low success rate:

only between 1 and 4 percent of microinjected eggs result in the live

birth of a sheep, goat, or cow containing the transgene, and about 80

to 90 percent of transgenic embryos die during early development.

Animal Cloning

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1. Cloning is defined as the deliberate production of genetically

identical individuals. Each newly produced individual is a clone of

the original.

2. Animal Cloning is done by somatic cell nuclear transfer

(SCNT) method.

3. This procedure starts with the removal of the chromosomes from

an egg to create an enucleated egg.

4. The chromosomes are replaced with a nucleus taken from a

somatic (body) cell of the individual or embryo to be cloned.

5. This cell could be obtained directly from the individual, from cells

grown in culture, or from frozen tissue.

6. They treat the reconstructed egg with chemicals or electricity to

stimulate cell division.

7. If the egg divides normally and forms a blastocyst (a small clump

of cells that forms after an egg is fertilized), scientists will transfer

it into a surrogate mother to develop into a new animal.

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8. The successful implantation of the blastocyst in a uterus can result

in its further development, culminating sometimes in the birth of

an animal.

9. This animal will be a clone of the individual that was the donor of

the nucleus.

10. Its nuclear DNA has been inherited from only one genetic parent.

Application of Animal Cloning:

Genetically engineered pigs or suitable breeds of pigs can be

cloned for organ transplantation.

Population of endangered species of animals can be increased by

cloning. Cloning can be of immense use in improving the pedigree

of livestock. Superior breeds of animals can be multiplied by this

technique.

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http://www.interactive-biology.com/3955/function-and-synthesis-of-

hemoglobin/

http://www.britannica.com/science/hemoglobin

http://www.fastbleep.com/biology-notes/40/116/1172

http://proteopedia.org/wiki/index.php/Hemoglobin

http://hannahhelpbiology.blogspot.in/2013/02/231-describe-

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http://www.ask.com/science/function-villi-9890a6c92b86d436

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https://www.boundless.com/physiology/textbooks/boundless-

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225/absorption-in-the-small-intestine-1105-808/

http://biology-thedigestivesystem.blogspot.in/2012/11/explain-how-

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http://www.livestrong.com/article/151766-chemical-properties-of-

sucrose/

http://www.ehow.com/about_5454423_properties-sucrose.html

http://pediaa.com/difference-between-glucose-and-fructose/

http://www.newworldencyclopedia.org/entry/Fructose

http://www.chemicalformula.org/sucrose

http://chemistry.tutorvista.com/organic-

chemistry/disaccharides.html

http://healthyliving.azcentral.com/digestion-absorption-sucrose-

17531.html

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https://www.verywell.com/what-is-glycogen-2242008

https://www.rpi.edu/dept/bcbp/molbiochem/MBWeb/mb1/part2/glyc

ogen.htm http://www.preservearticles.com/2012042131039/the-

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http://www.innerbody.com/image_musc01/musc71.html

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locomotion-218/skeletal-muscle-fiber-structure-824-12067/

http://www.britannica.com/science/skeletal-muscle

http://www.ivyroses.com/HumanBody/Tissue/Tissue_Muscular-

Tissue.php

https://cyhsanatomy1.wikispaces.com/What+is+a+Simple+Twitch%3F

http://www.southsudanmedicaljournal.com/archive/may-2010/how-to-read-an-

electrocardiogram-ecg.-part-one-basic-principles-of-the-ecg.-the-normal-ecg.html

http://geekymedics.com/understanding-an-ecg/

http://www.practicalclinicalskills.com/ecg-interpretation.aspx

https://www.nhlbi.nih.gov/health/health-topics/topics/ekg

http://www.emedicinehealth.com/electrocardiogram_ecg/page6_em.htm

http://www.interactive-biology.com/3955/function-and-synthesis-of-hemoglobin/

http://www.britannica.com/science/hemoglobin

http://www.fastbleep.com/biology-notes/40/116/1172

http://proteopedia.org/wiki/index.php/Hemoglobin

http://hannahhelpbiology.blogspot.in/2013/02/231-describe-structure-of-villus-and.html

http://www.ask.com/science/function-villi-9890a6c92b86d436

Page 100: Animal physiology and biochemistry lab manual

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https://answers.yahoo.com/question/index?qid=20071216082414AAdPQDPhttps://www.b

oundless.com/physiology/textbooks/boundless-anatomy-and-physiology-

textbook/digestive-system-23/absorption-225/absorption-in-the-small-intestine-1105-

808/

http://biology-thedigestivesystem.blogspot.in/2012/11/explain-how-structure-of-villus-

is.html

http://www.livestrong.com/article/151766-chemical-properties-of-sucrose/

http://www.ehow.com/about_5454423_properties-sucrose.html

http://pediaa.com/difference-between-glucose-and-fructose/

http://www.newworldencyclopedia.org/entry/Fructose

http://www.chemicalformula.org/sucrose

http://chemistry.tutorvista.com/organic-chemistry/disaccharides.html

http://healthyliving.azcentral.com/digestion-absorption-sucrose-17531.html

https://www.verywell.com/what- is-glycogen-2242008

https://www.rpi.edu/dept/bcbp/molbiochem/MBWeb/mb1/part2/glycogen.htmhttp://

www.preservearticles.com/2012042131039/the-structure-of-the-

smoothstriatedcardiac-muscle-tissue-with-a-diagram.html

http://www.innerbody.com/image_musc01/musc71.html

http://slidingfilament.webnode.com/cardiac-muscle/

http://www.preservearticles.com/2012042131039/the-structure-of-the-

smoothstriatedcardiac-muscle-tissue-with-a-diagram.html

https://www.boundless.com/biology/textbooks/boundless-biology-textbook/the-

musculoskeletal-system-38/muscle-contraction-and-locomotion-218/skeletal-muscle-

fiber-structure-824-12067/

http://www.britannica.com/science/skeletal-muscle

http://www.ivyroses.com/HumanBody/Tissue/Tissue_Muscular-Tissue.php