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Page 1: A D POLIOMAVIRUS - UBdiposit.ub.edu/dspace/bitstream/2445/42403/7/07.NAG_BIBLIOGRAFIA… · A global decline in microbiological safety of water: a call for action. American Academy
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ANÀLISI DE POLIOMAVIRUS I ADENOVIRUS HUMANS COM A

INDICADORS DE LA CONTAMINACIÓ VÍRICA D’ORIGEN HUMÀ EN

AIGUA

Departament de Microbiologia

Facultat de Biologia Universitat de Barcelona

Memòria presentada per

Néstor Albiñana Giménez

per optar al grau de Doctor per la Universitat de Barcelona

Programa de Doctorat: Microbiologia Ambiental y Biotecnologia

Bienni: 2002-2004

Tesi realitzada sota la direcció de la Dra. Rosina Gironés, al departament de

Microbiologia de la Universitat de Barcelona.

VP de la directora, El doctorand,

Dra. Rosina Gironés Llop Néstor Albiñana Giménez

Barcelona, Setembre 2008

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BIBLIOGRAFIA

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