2dnmr. coupling constants geminal coupling are usually negative: ch 2 vicinal coupling usually...

36
2DNMR

Post on 19-Dec-2015

228 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

2DNMR

Page 2: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

Coupling Constants

Geminal Coupling are usually negative: CH2

Vicinal coupling usually positive:

CH-CH

Why?Coupling is through bonding electrons;

consider the following model

Page 3: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

2D NMR basically provides information about connectivity and proximity

COSY spectroscopy (correlation spectroscopy)(various pulse sequences are available

providing similar information)

Page 4: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

HH COSY

Page 5: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

H H COSY-90

Page 6: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

Long range HH COSY

Page 7: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

H C COSY

HSQC method

Page 8: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

gradient select

HMQC

method

gradient select

HMBC

method

Page 9: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

2. Off-resonance decoupling

Page 10: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

CH3

O

2

NOE enhancement observed

Page 11: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

13C NMR

Coupling is reduced, but multiplicity is retained; 1H irradiation 1 ppm upfield from TMS; to observe multiplicity at C-3, 1H irradiation could be set to 10 ppm downfield from TMS

Page 12: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

signals can be integrated

Page 13: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

Demonstration of the effect of NOE on decoupling

Page 14: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;
Page 15: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

C-9 signal as a function of H decoupling

C-9

Page 16: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

3. Attached protons

Page 17: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;
Page 18: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

4. Identification of nearest neighbors

Page 19: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

Identification of 1,1’-Me

Identification of 5-Me

Identification of 10-Me

Identification of H4

Identification of H3

Identification of H2

HH

p = 3

q = 2

Page 20: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

irradiate

normal spectrum

H4 doublet

little interaction

triplet

Selective Decoupling

Page 21: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

Results are often reported as difference spectra

Page 22: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

10 Note: peak s 2 and 3 are mislabeled

Page 23: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

Measurement of CH coupling constants Heteronuclear J resolved Spectrum

Page 24: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

Identify the carbons by chemical shift

j

i

h d

g

f e

a bc

Page 25: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

Let test our assignments using ACD

Page 26: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

An INADEQUATE spectrum (incredible natural abundance double quantum transfer experiment spectroscopy) measures 13C –13C transfer of magnetization between two 13 C nuclei using natural abundance C (detection of 1 in 10000 molecules).

j i

e

d

g

f

h

c

i

id

g

f

f

e a,b

hj

a,b

Page 27: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

XAM2

where JAX= JAM

JXM = 0

AX3

Page 28: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

Can we assign the peaks?

carbon count

Page 29: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

1 3 CH3

2 CH2

=CH2 =CC2

Page 30: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

1

2,6

8,9,10

4,5

Page 31: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

NOE Difference Spectra

Some NOE operates through space as well as through bonding electrons. The through space interaction decreases as the inverse of the sixth power of the through space distance of the nuclei. The through space interaction occurs between nuclei that interact by a dipolar interaction

The NOE difference spectrum is obtained by subtracting a normal spectrum from one in which a specific proton is irradiated. An measurable interaction can be expected up to about 4Å.

Page 32: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

irradiated

irradiated

a

a

bb

b

62

9

Page 33: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

irradiated

Irradiated

irradiated

a

a

b

b

c

c

62

10 9 8

Page 34: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

irradiated

irradiated

Page 35: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

1

5 4

Page 36: 2DNMR. Coupling Constants Geminal Coupling are usually negative: CH 2 Vicinal coupling usually positive: CH-CH Why? Coupling is through bonding electrons;

1H NMR

13C NMR

CH2OH

1

234

56

78 9

10

1

1

3,7 2,6 4,5 9,10,8

62

45

OH

89,10