2792 - kymab€¦ · #2792. the combination of immune checkpoint blockers with the anti-icos ky1044...

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#2792 The combination of immune checkpoint blockers with the anti-ICOS KY1044 antibody results in a strong anti-tumour response Richard C.A. Sainson (*) , Anil Thotakura, Nahida Parveen, Miha Kosmac, Gwenoline Borhis, Joana Carvalho, Tracey Myers, Robert Rowlands, Rachael Kimber, Hanif Ali, Hannah Craig, Vivian Wong, Qi Liang, Jamie Campbell, Ian Kirby, Volker Germaschewski and Matthew McCourt. Kymab Ltd, The Bennet Building, Babraham Research Campus, Cambridge CB22 3AT, U.K. (*) email: [email protected] By immunizing Kymice™ in which endogenous Icos gene has been knocked out [5], we have identified a novel, fully human antibody called KY1044 which cross reacts with mouse ICOS facilitating in vivo studies in immune proficient mice. KY1044 is a fully human anti-ICOS subclass G1 kappa monoclonal antibody that selectively binds to ICOS. Table 1 shows the affinity of KY1044 Fabs for human, mouse and Cynomolgus monkey ICOS proteins. KY1044 binds human, cynomolgus monkey, rat and mouse ICOS with similar affinity. KY1044 has a dual mechanism of action: (1) preferential depletion of intratumoural ICOS high T Reg resulting in an increase in T Eff :T Reg ratio in the TME; and (2) stimulation of ICOS-positive T effector cells. KY1044 T Eff Activation = T Reg Content Anti-Tumour Immune Response + ICOS low ICOS high T Eff T Reg 1. ADCC NK inhibition 2. Agonism (Co-stimulatory) Depletes Stimulates Anti-Tumour Immune Response 1. Mandal et al, JCI Insight. 2016 Oct 20; 1(17): e89829. 2. Tu et al, Sci Rep. 2016 Oct 11;6:35056. 3. Nagase et al, Int J Cancer. 2017 Feb 1;140(3):686-695. 4. Conrad et al Cancer Res. 2012 Oct 15;72(20):5240-9. 5. Lee et al Nat Biotechnol. 2014 Apr;32(4):356-63. References ICOS/FOXP3 in cancer ssGSEA score (ICOS + FOXP3) Tumour types (n) ICOS is an inducible T-cell co-stimulator that is structurally and functionally related to CD28/CTLA-4. ICOS regulates both pro- and anti-inflammatory cytokine production by effector and regulatory T-cells (T Reg ), as well as T-cell proliferation and survival. ICOS is involved in the interaction between T- and B-cells (Ig class switching), and in antibody responses to T-cell dependent antigens. Figure 1: FACS analysis showing ICOS expression in the spleen and in CT26 tumours (n=7). Spleens and tumours (~200mm 3 ) were harvested and processed into single cells and stained for specific immune T-cell markers and ICOS. (A) shows the percentage in the two tissues of CD8 + effector cells, CD4 + /FOXP3 - effector cells and CD4 + /FOXP3 + T Reg expressing ICOS. (B) Relative expression of ICOS (as determined by the mean fluorescence intensity, MFI) on the cell subtypes as in (A) in spleens and tumours. (C) Plots show the use of viSNE (Visualization of t-distributed stochastic neighbor embedding) to obtain a comprehensive single-cell view to distinguish the T cell subpopulations (CD3 cells) in untreated CT26 tumours. ICOS expression levels vary in different immune cell subtypes (Fig.1), being higher on immunosuppressive T Reg (CD4 + /FOXP3 + ) than on effector CD8 + T-Effector cells (CD8 + T Eff ), and higher in the tumour microenvironment (TME) than in the periphery (e.g. spleen). Figure 2: Quantification of ICOS positive cells per mm 2 . A total of 995 tumour cores (from 6 different indications) and 48 cores from the same matching 6 healthy tissues were stained with anti-ICOS. The number of positive cells were quantified using the image analysis Halo platform. Several tumour types are associated with high ICOS expression when compared to matching normal tissues (Fig.2). High levels of intratumoural ICOS positive T Reg have been associated with poor survival in several cancer types such as head and neck, ovarian, hepatocellular carcinoma and gastric cancer [1-4]. The preferential high expression of ICOS on intratumoural T Reg makes this protein a strong candidate for a depleting antibody strategy. Tumour Spleen Introduction (B) (A) (C) ICOS/mm 2 in tumour (n=995 from 6 indications) ICOS/mm 2 in normal (n=48 from matching tissues) (i) ICOS (brown) CD8 (purple) (ii) ICOS (purple) FoxP3 (brown) (A) ADCC Promega assay (FcγRIIIa signalling) (B) ADCC using primary human NK cells Figure 3: ADCC assays demonstrating KY1044 IgG1 killing potential in vitro. (A) KY1044 binds to CHO cells expressing ICOS proteins from different species and induces FcγRIIIa-dependent signalling, resulting in NFAT-mediated luciferase activity. (B) Human NK cells purified from PBMC (collected from healthy donors) were co-cultured for 4 hours in the presence of different concentrations of KY1044 and ICOS-positive CEM cells preloaded with BATDA (5:1 E:T ratio). KY1044 kills ICOS High cells via ADCC (A) MJ cell line agonism assay (B) Primary T-cell assay KY1044 induces IFNγ release from ICOS + T-cells Figure 4: Plate bound KY1044 IgG1 induces IFNγ secretion by T-cells in vitro. (A) MJ cells (a T lymphoblast cell line from ATCC) which express endogenously high levels of ICOS can produce and secrete IFNγ in response to KY1044 pre-coated onto plates. (B) Primary isolated CD4/CD8 T-cells isolated from 8 healthy donors were activated with anti-CD3/CD28 (shown to induce ICOS expression) and cultured in plates pre-coated with 5ug/ml of KY1044 (n=8 donors). IFNγ levels were measured by MSD after 72 hours of culture. (**) p<0.01. KY1044 triggers strong monotherapy efficacy in vivo (A20 model) Figure 5: Spider plot and Kaplan Meier curves showing the anti-tumour efficacy of KY1044 mIgG2a in the A20 B cell lymphoma syngeneic model (sub-cut implantation of A20 and IP dosing from day 8 of KY1044 mIgG2 at 10mg/kg). Numbers in brackets indicate the number of animals showing no signs of disease at endpoint. Vertical lines indicate day of dosing. 0% cure 90% cure Figure 6: Long term anti-tumour efficacy of KY1044 mIgG2a in combination with anti-PD-L1. (A) Kaplan Meier graphs demonstrating anti-tumour efficacy of KY1044 mIgG2a in combination with anti-PD-L1 in the CT26 model. CT26 cells were implanted sub-cut in the right flank of 8-10 week old Balb/c mice and treated with the isotype control, anti-PD-L1, KY1044 mIgG2a or a combination of both antibodies. Animals (n=10 per treatment groups) were dosed IP 3 times a week for two weeks (vertical lines) from day 6 post tumour cells implantation. KY1044 was dosed at 3mg/kg TIW and anti-PD-L1 at 10mg/kg. (B) Some of the mice that rejected the first tumour challenge in response to KY1044/anti-PD-L1 monotherapies and combination, were subsequently randomized into two groups and rechallenged with either the CT26 or the EMT6 cells line. Only mice implanted with EMT6 demonstrated tumour growth. In response to the original treatments, mice that rejected the CT26 tumours have established an immune memory response to the cell line. (C) Table showing example of syngeneic models that are sensitive to either KY1044 monotherapy or to the combination of KY1044 mIgG2a with anti-PD-L1. KY1044 and anti-PD-L1 strongly synergize in an anti-PD-L1 resistant model (B) Tumour rechallenge (A) CT26 model (A) T Reg in the tumours Figure 7: (A) Graph showing the effect of KY1044 mIgG2a on T Reg levels in tumours (n=4 per time points/conditions, at different doses and at different times post dosing). (B) An intermediate dose of KY1044 mIgG2a (3mg/kg) was associated with the highest increase in CD8: T Reg ratio by day 20. (C) The intermediate dose of KY1044 was also associated with the highest increase in CD4 helper (and CD8, data not shown) T-cells expressing IFNγ in the TME. (*) p<0.05, (***) p<0.001. KY1044 depletes intratumoural T Reg in vivo KY1044/Control Timeline(days) Cells Cull/PD analysis Dosing CT26 tumour model 0 12 13 14 15 16 20 KY1044, a novel fully human anti-ICOS antibody has a dual mechanism of action. KY1044 has the ability of killing ICOS high cells via ADCC. KY1044 also acts as an agonist antibody on ICOS + effector cells in vitro (IFNγ release). As shown in different models, KY1044 strongly inhibits tumour growth as monotherapy & in combination with checkpoint inhibitors such as anti-PDL1. KY1044 depletes intratumoural T Reg , improves the effector to T Reg ratio and also induces the up-regulation of inflammatory cytokines in vivo. Intratumoural T Reg express high level of ICOS on their surface. ICOS/FOXP3 expression varies in human tumour types, showing high expression in head and neck cancers, and low expression in glioblastoma/glioma. ICOS is highly expressed in the TME and especially on T Reg (e.g. Head and Neck Cancer) In summary, our data demonstrates that targeting ICOS with KY1044 is a valid approach for manipulating the immune system and for inducing a strong anti- tumour response. The data presented here also warrant the assessment of KY1044 in cancer patients in a clinical trial. Conclusions Increased efficacy at an intermediate dose Figure 9: ICOS expression in human cancer: (A)Joy plot showing gene set enrichment analysis of ICOS and FOXP3 expression in different tumour types (TCGA dataset). The tumour types are indicated on the left (using the abbreviation from the TCGA website (https://tcga- data.nci.nih.gov). Tumours are ranked based on high expression (yellow) to low expression (purple). The number of samples per indications is also shown in brackets. (B) Examples of ICOS staining in the context of CD8 and FOXP3 positive cells in a biopsy from a Head and Neck cancer patient. (i) ICOS/CD8 co-staining by IHC highlights the low expression of ICOS in CD8 positive cells. (ii) ICOS/FOXP3 co-staining by IHC highlights the high incidence of ICOS expression in FOXP3 (T Reg ) cells. Figure 8: Kaplan Meier graph demonstrating higher anti- tumour efficacy of anti- ICOS/anti-PD-L1 at the intermediate dose of KY1044. CT26 cells were implanted sub- cut in the flank of 8-10 week old Balb/c mice and treated with the isotype control, anti-PD-L1, or a combination of KY1044 mIgG2a and anti-PD-L1. Animals (n=7-9 animals per treatment group) were dosed IP 3 times a week for two weeks (vertical lines) from day 8. (A) (B) (B) CD8:T Reg ratio (day 20) (C) IFNγ+ve CD4 cells (day 20) Models KY1044 Monotherapy Anti-PD-L1 Monotherapy Combo KY1044 with anti-PD-L1 CT26 (Balb/c) +/- +/- ++ A20 (Balb/c) ++/+++ +/- ++/+++ J558 (Balb/c) ++ ++ +++ MC38 (C57Bl/6) +/- + ++ (C) KY1044 sensitive syngeneic tumour models (-) no efficacy (+/-) tumour growth delay or CR<20% (+) CR 20-39% (++) CR 39-99% (+++) CR 100% Average ka (1/Ms) Average kd (1/s) Average K D (nM) SD K D (nM) Human ICOS 1.53E+06 3.93E-03 2.59 0.120 Mouse ICOS 2.78E+06 2.83E-03 1.09 0.438 Cyno ICOS 1.64E+06 1.28E-03 0.86 0.382

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Page 1: 2792 - Kymab€¦ · #2792. The combination of immune checkpoint blockers with the anti-ICOS KY1044 antibody results in a strong anti-tumour response. Richard C.A. Sainson (*) , Anil

#2792The combination of immune checkpoint blockers with the anti-ICOS KY1044 antibody results in a strong anti-tumour responseRichard C.A. Sainson (*), Anil Thotakura, Nahida Parveen, Miha Kosmac, Gwenoline Borhis, Joana Carvalho, Tracey Myers, Robert Rowlands, Rachael Kimber, Hanif Ali, Hannah Craig, Vivian Wong, Qi Liang, Jamie Campbell, Ian Kirby, Volker Germaschewski

and Matthew McCourt. Kymab Ltd, The Bennet Building, Babraham Research Campus, Cambridge CB22 3AT, U.K. (*) email: [email protected]

By immunizing Kymice™ in which endogenous Icos gene has beenknocked out [5], we have identified a novel, fully human antibody calledKY1044 which cross reacts with mouse ICOS facilitating in vivo studiesin immune proficient mice.

KY1044 is a fully human anti-ICOS subclass G1 kappa monoclonalantibody that selectively binds to ICOS.

Table 1 shows the affinity of KY1044 Fabs for human, mouse and Cynomolgus monkey ICOSproteins.

KY1044 binds human, cynomolgus monkey, rat and mouse ICOS withsimilar affinity.

KY1044 has a dual mechanism of action: (1) preferential depletion ofintratumoural ICOShigh TReg resulting in an increase in TEff : TReg ratio inthe TME; and (2) stimulation of ICOS-positive T effector cells.

KY1044

TEff Activation =TReg Content Anti-Tumour Immune Response+

ICOSlow

ICOShigh

TEff

TReg1. ADCC NKin

hibi

tion

2. Agonism(Co-stimulatory)

Depletes

Stimulates

Anti-Tumour Immune

Response

1. Mandal et al, JCI Insight. 2016 Oct 20; 1(17): e89829.2. Tu et al, Sci Rep. 2016 Oct 11;6:35056.3. Nagase et al, Int J Cancer. 2017 Feb 1;140(3):686-695.4. Conrad et al Cancer Res. 2012 Oct 15;72(20):5240-9.5. Lee et al Nat Biotechnol. 2014 Apr;32(4):356-63.

References

ICOS/FOXP3 in cancer

ssGSEA score (ICOS + FOXP3)

Tum

our t

ypes

(n)

ICOS is an inducible T-cell co-stimulator that is structurally andfunctionally related to CD28/CTLA-4.

ICOS regulates both pro- and anti-inflammatory cytokine productionby effector and regulatory T-cells (TReg), as well as T-cellproliferation and survival.

ICOS is involved in the interaction between T- and B-cells (Ig classswitching), and in antibody responses to T-cell dependentantigens.

Figure 1: FACS analysis showing ICOS expression in the spleen and in CT26 tumours(n=7). Spleens and tumours (~200mm3) were harvested and processed into single cellsand stained for specific immune T-cell markers and ICOS. (A) shows the percentage in thetwo tissues of CD8+ effector cells, CD4+/FOXP3- effector cells and CD4+/FOXP3+ TRegexpressing ICOS. (B) Relative expression of ICOS (as determined by the meanfluorescence intensity, MFI) on the cell subtypes as in (A) in spleens and tumours.(C) Plots show the use of viSNE (Visualization of t-distributed stochastic neighborembedding) to obtain a comprehensive single-cell view to distinguish the T cellsubpopulations (CD3 cells) in untreated CT26 tumours.

ICOS expression levels vary in different immune cell subtypes(Fig.1), being higher on immunosuppressive TReg (CD4+/FOXP3+)than on effector CD8+ T-Effector cells (CD8 + TEff), and higher in thetumour microenvironment (TME) than in the periphery (e.g. spleen).

Figure 2: Quantification of ICOS positive cells per mm2. A total of 995 tumour cores (from6 different indications) and 48 cores from the same matching 6 healthy tissues werestained with anti-ICOS. The number of positive cells were quantified using the imageanalysis Halo platform.

Several tumour types are associated with high ICOS expressionwhen compared to matching normal tissues (Fig.2). High levels ofintratumoural ICOS positive TReg have been associated with poorsurvival in several cancer types such as head and neck, ovarian,hepatocellular carcinoma and gastric cancer [1-4].

The preferential high expression of ICOS on intratumoural TRegmakes this protein a strong candidate for a depleting antibodystrategy.

TumourSpleen

Introduction

(B) (A)

(C)

ICOS/mm2 in tumour(n=995 from 6 indications)

ICOS/mm2 in normal(n=48 from matching tissues)

(i) ICOS (brown) CD8 (purple)

(ii) ICOS (purple) FoxP3 (brown)

(A) ADCC Promega assay (FcγRIIIa signalling)

(B) ADCC using primary human NK cells

Figure 3: ADCC assays demonstrating KY1044 IgG1 killing potential in vitro. (A) KY1044 bindsto CHO cells expressing ICOS proteins from different species and induces FcγRIIIa-dependentsignalling, resulting in NFAT-mediated luciferase activity. (B) Human NK cells purified fromPBMC (collected from healthy donors) were co-cultured for 4 hours in the presence of differentconcentrations of KY1044 and ICOS-positive CEM cells preloaded with BATDA (5:1 E:T ratio).

KY1044 kills ICOSHigh cells via ADCC

(A) MJ cell line agonism assay (B) Primary T-cell assay

KY1044 induces IFNγ release from ICOS+ T-cells

Figure 4: Plate bound KY1044 IgG1induces IFNγ secretion by T-cells in vitro.(A) MJ cells (a T lymphoblast cell linefrom ATCC) which expressendogenously high levels of ICOS canproduce and secrete IFNγ in response toKY1044 pre-coated onto plates. (B)Primary isolated CD4/CD8 T-cellsisolated from 8 healthy donors wereactivated with anti-CD3/CD28 (shown toinduce ICOS expression) and cultured inplates pre-coated with 5ug/ml ofKY1044 (n=8 donors). IFNγ levels weremeasured by MSD after 72 hours ofculture. (**) p<0.01.

KY1044 triggers strong monotherapy efficacy in vivo (A20 model)

Figure 5: Spider plot and Kaplan Meiercurves showing the anti-tumour efficacyof KY1044 mIgG2a in the A20 B celllymphoma syngeneic model (sub-cutimplantation of A20 and IP dosing fromday 8 of KY1044 mIgG2 at 10mg/kg).Numbers in brackets indicate thenumber of animals showing no signs ofdisease at endpoint. Vertical linesindicate day of dosing.

0% cure 90% cure

Figure 6: Long term anti-tumour efficacy of KY1044 mIgG2a in combination with anti-PD-L1. (A) Kaplan Meier graphs demonstrating anti-tumourefficacy of KY1044 mIgG2a in combination with anti-PD-L1 in the CT26 model. CT26 cells were implanted sub-cut in the right flank of 8-10 weekold Balb/c mice and treated with the isotype control, anti-PD-L1, KY1044 mIgG2a or a combination of both antibodies. Animals (n=10 pertreatment groups) were dosed IP 3 times a week for two weeks (vertical lines) from day 6 post tumour cells implantation. KY1044 was dosed at3mg/kg TIW and anti-PD-L1 at 10mg/kg. (B) Some of the mice that rejected the first tumour challenge in response to KY1044/anti-PD-L1monotherapies and combination, were subsequently randomized into two groups and rechallenged with either the CT26 or the EMT6 cells line.Only mice implanted with EMT6 demonstrated tumour growth. In response to the original treatments, mice that rejected the CT26 tumours haveestablished an immune memory response to the cell line. (C) Table showing example of syngeneic models that are sensitive to either KY1044monotherapy or to the combination of KY1044 mIgG2a with anti-PD-L1.

KY1044 and anti-PD-L1 strongly synergize in an anti-PD-L1 resistant model

(B) Tumour rechallenge(A) CT26 model

(A) TReg in the tumours

Figure 7: (A) Graph showing the effect of KY1044 mIgG2a on TReg levels in tumours (n=4 per time points/conditions, at different doses and atdifferent times post dosing). (B) An intermediate dose of KY1044 mIgG2a (3mg/kg) was associated with the highest increase in CD8: TReg ratio byday 20. (C) The intermediate dose of KY1044 was also associated with the highest increase in CD4 helper (and CD8, data not shown) T-cellsexpressing IFNγ in the TME. (*) p<0.05, (***) p<0.001.

KY1044 depletes intratumoural TReg in vivo

KY1044/Control

Timeline(days)

CellsCull/PD analysisDosing

CT26 tumour model 0 12 13 14 15 16 20

KY1044, a novel fully human anti-ICOS antibody has a dual mechanism ofaction. KY1044 has the ability of killing ICOShigh cells via ADCC. KY1044 alsoacts as an agonist antibody on ICOS+ effector cells in vitro (IFNγ release).

As shown in different models, KY1044 strongly inhibits tumour growth asmonotherapy & in combination with checkpoint inhibitors such as anti-PDL1.

KY1044 depletes intratumoural TReg, improves the effector to TReg ratio andalso induces the up-regulation of inflammatory cytokines in vivo.

Intratumoural TReg express high level of ICOS on their surface. ICOS/FOXP3expression varies in human tumour types, showing high expression in headand neck cancers, and low expression in glioblastoma/glioma. ICOS is highlyexpressed in the TME and especially on TReg (e.g. Head and Neck Cancer)

In summary, our data demonstrates that targeting ICOS with KY1044 is a validapproach for manipulating the immune system and for inducing a strong anti-tumour response. The data presented here also warrant the assessment ofKY1044 in cancer patients in a clinical trial.

Conclusions

Increased efficacy at an intermediate dose

Figure 9: ICOS expression in human cancer: (A)Joy plot showing gene set enrichment analysisof ICOS and FOXP3 expression in different tumour types (TCGA dataset). The tumour typesare indicated on the left (using the abbreviation from the TCGA website (https://tcga-data.nci.nih.gov). Tumours are ranked based on high expression (yellow) to low expression(purple). The number of samples per indications is also shown in brackets. (B) Examples ofICOS staining in the context of CD8 and FOXP3 positive cells in a biopsy from a Head andNeck cancer patient. (i) ICOS/CD8 co-staining by IHC highlights the low expression of ICOS inCD8 positive cells. (ii) ICOS/FOXP3 co-staining by IHC highlights the high incidence of ICOSexpression in FOXP3 (TReg) cells.

Figure 8: Kaplan Meier graphdemonstrating higher anti-tumour efficacy of anti-ICOS/anti-PD-L1 at theintermediate dose of KY1044.CT26 cells were implanted sub-cut in the flank of 8-10 week oldBalb/c mice and treated with theisotype control, anti-PD-L1, or acombination of KY1044 mIgG2aand anti-PD-L1. Animals (n=7-9animals per treatment group)were dosed IP 3 times a weekfor two weeks (vertical lines)from day 8.

(A) (B)

(B) CD8:TReg ratio (day 20) (C) IFNγ+ve CD4 cells (day 20)

Models KY1044 Monotherapy Anti-PD-L1 Monotherapy Combo KY1044 with anti-PD-L1CT26 (Balb/c) +/- +/- ++A20 (Balb/c) ++/+++ +/- ++/+++J558 (Balb/c) ++ ++ +++MC38 (C57Bl/6) +/- + ++

(C) KY1044 sensitive syngeneic tumour models

(-) no efficacy(+/-) tumour growth delay or CR<20%(+) CR 20-39%(++) CR 39-99%(+++) CR 100%

Average ka (1/Ms)

Average kd(1/s)

Average KD(nM) SD KD (nM)

Human ICOS 1.53E+06 3.93E-03 2.59 0.120

Mouse ICOS 2.78E+06 2.83E-03 1.09 0.438

Cyno ICOS 1.64E+06 1.28E-03 0.86 0.382