zinc-finger nucleases and their application in the treatment of genetic diseases

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LETTER TO THE EDITOR Zinc-Finger Nucleases and their Application in the Treatment of Genetic Diseases Zinc-nger nucleases (ZFNs) are DNA-binding proteins coupled to the catalytic domain from the FokI restriction endonuclease. 1 ZFNs create double-strand breaks in specic DNA sequences, stim- ulating the cells endogenous DNA repair processes. 2 They can also be engineered to target a desired DNA sequence allowing a site- specic manipulation of the mammalian genome in a wide variety of cells, resulting in cell lines with targeted gene modication. For a long time, ZFN technology has been looked upon by researchers in the treatment of inherited genetic mutations. Functionally cor- rected patient-derived stem cells can be used for autologous trans- plantation therapies and to cure various diseases. 3 Recently, engineered ZFNs have been employed successfully to manipulate the human genome of induced pluripotent stem cells derived from sickle cell anemia and X-linked chronic granuloma- tous disease patients. 4 In addition, Phase 1 clinical trials employing ZFNs to treat glioblastoma and human immunodeciency virus (HIV)/AIDS are under way. The C-C chemokine receptor type 5 (CCR5) protein on T-cells, required by certain HIV viruses to enter and infect these cells, may become resistant due to ZFN-mediated introduction of mutated CCR5 alleles. This technology can also be used to treat a wide variety of hemoglobinopathies, as successful correction of a-thalassemia has already been reported. 5 In spite of successful clinical trials, ZFN-mediated gene ther- apy has still not been completely put into clinical practice due to unclear challenges. ZFN-induced genotoxicity and cytotoxicity are among the major issues that need to be resolved prior to the full implementation of their clinical application. The intro- duction of genomic double-strand breaks has been shown to induce cell cycle arrest and cell death, apart from triggering multiple DNA damage response pathways and altering the activ- ity of numerous cellular proteins. 2 Furthermore, illegitimate integration and off target DNA modication have still not been fully understood and needs further research. Finally, there is also a need to develop both safer ZFNs and safer delivery methods to minimize genotoxic side effects. However, in view of the progress made in the past decade, one cannot help but feel optimistic about the revolution ZFN technology can bring in the eld of medicine. References 1. Schierling B, Dannemann N, Gabsalilow L, Wende W, Cathomen T, Pingoud A. A novel zinc-nger nuclease platform with a sequence-specic cleavage module. Nucleic Acids Res 2011;40:2623e38. 2. Olsen PA, Gelazauskaite M, Randøl M, Krauss S. Analysis of illegitimate genomic integration mediated by zinc-nger nucleases: implications for specicity of tar- geted gene correction. BMC Mol Biol 2010;11:35. 3. Cathomen T, Joung KJ. Zinc-nger nucleases: the next generation emerges. Mol Ther 2008;16:1200e7. 4. Sebastiano V, Maeder ML, Angstman JF, Haddad B, Khayter C, Yeo DT, Goodwin MJ, et al. In situ genetic correction of the sickle cell anemia mutation in human induced pluripotent stem cells using engineered zinc nger nucleases. Stem Cells 2011;29:1717e26. 5. Chang CJ, Bouhassira EE. Zinc-nger nuclease-mediated correction of a-thalas- semia in iPS cells. Blood 2012;120:3906e14. Muhammad Saad Farooq * , Muhammad Zain Farooq Dow Medical College, Dow University of Health Sciences, Karachi, Pakistan * Corresponding author. E-mail: M.S. Farooq <[email protected]>. Feb 3, 2014 Conict of interest: The authors declare that they have no conict of interests. Contents lists available at ScienceDirect Journal of Experimental and Clinical Medicine journal homepage: http://www.jecm-online.com J Exp Clin Med 2014;-(-):1 http://dx.doi.org/10.1016/j.jecm.2014.03.005 1878-3317/Copyright Ó 2014, Taipei Medical University. Published by Elsevier Taiwan LLC. All rights reserved. Please cite this article in press as: Farooq MS, Farooq MZ, Zinc-Finger Nucleases and their Application in the Treatment of Genetic Diseases, Journal of Experimental and Clinical Medicine (2014), http://dx.doi.org/10.1016/j.jecm.2014.03.005

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Page 1: Zinc-finger Nucleases and Their Application in the Treatment of Genetic Diseases

lable at ScienceDirect

J Exp Clin Med 2014;-(-):1

Contents lists avai

Journal of Experimental and Clinical Medicine

journal homepage: http : / /www.jecm-onl ine.com

LETTER TO THE EDITOR

Zinc-Finger Nucleases and their Application in the Treatment of Genetic Diseases

Zinc-finger nucleases (ZFNs) are DNA-binding proteins coupled tothe catalytic domain from the FokI restriction endonuclease.1

ZFNs create double-strand breaks in specific DNA sequences, stim-ulating the cell’s endogenous DNA repair processes.2 They can alsobe engineered to target a desired DNA sequence allowing a site-specific manipulation of the mammalian genome in a wide varietyof cells, resulting in cell lines with targeted genemodification. For along time, ZFN technology has been looked upon by researchers inthe treatment of inherited genetic mutations. Functionally cor-rected patient-derived stem cells can be used for autologous trans-plantation therapies and to cure various diseases.3

Recently, engineered ZFNs have been employed successfully tomanipulate the human genome of induced pluripotent stem cellsderived from sickle cell anemia and X-linked chronic granuloma-tous disease patients.4 In addition, Phase 1 clinical trials employingZFNs to treat glioblastoma and human immunodeficiency virus(HIV)/AIDS are under way. The C-C chemokine receptor type 5(CCR5) protein on T-cells, required by certain HIV viruses to enterand infect these cells, may become resistant due to ZFN-mediatedintroduction of mutated CCR5 alleles. This technology can also beused to treat a wide variety of hemoglobinopathies, as successfulcorrection of a-thalassemia has already been reported.5

In spite of successful clinical trials, ZFN-mediated gene ther-apy has still not been completely put into clinical practice due tounclear challenges. ZFN-induced genotoxicity and cytotoxicityare among the major issues that need to be resolved prior tothe full implementation of their clinical application. The intro-duction of genomic double-strand breaks has been shown toinduce cell cycle arrest and cell death, apart from triggeringmultiple DNA damage response pathways and altering the activ-ity of numerous cellular proteins.2 Furthermore, illegitimate

Conflict of interest: The authors declare that they have no conflict of interests.

http://dx.doi.org/10.1016/j.jecm.2014.03.0051878-3317/Copyright � 2014, Taipei Medical University. Published by Elsevier Taiwan LL

Please cite this article in press as: Farooq MS, Farooq MZ, Zinc-Finger NuJournal of Experimental and Clinical Medicine (2014), http://dx.doi.org/1

integration and off target DNA modification have still not beenfully understood and needs further research. Finally, there isalso a need to develop both safer ZFNs and safer deliverymethods to minimize genotoxic side effects. However, in viewof the progress made in the past decade, one cannot help butfeel optimistic about the revolution ZFN technology can bringin the field of medicine.

References

1. Schierling B, Dannemann N, Gabsalilow L, Wende W, Cathomen T, Pingoud A. Anovel zinc-finger nuclease platform with a sequence-specific cleavage module.Nucleic Acids Res 2011;40:2623e38.

2. Olsen PA, Gelazauskaite M, Randøl M, Krauss S. Analysis of illegitimate genomicintegration mediated by zinc-finger nucleases: implications for specificity of tar-geted gene correction. BMC Mol Biol 2010;11:35.

3. Cathomen T, Joung KJ. Zinc-finger nucleases: the next generation emerges. MolTher 2008;16:1200e7.

4. Sebastiano V, Maeder ML, Angstman JF, Haddad B, Khayter C, Yeo DT,Goodwin MJ, et al. In situ genetic correction of the sickle cell anemia mutationin human induced pluripotent stem cells using engineered zinc finger nucleases.Stem Cells 2011;29:1717e26.

5. Chang CJ, Bouhassira EE. Zinc-finger nuclease-mediated correction of a-thalas-semia in iPS cells. Blood 2012;120:3906e14.

Muhammad Saad Farooq*, Muhammad Zain FarooqDow Medical College, Dow University of Health Sciences,

Karachi, Pakistan

*Corresponding author.E-mail: M.S. Farooq <[email protected]>.

Feb 3, 2014

C. All rights reserved.

cleases and their Application in the Treatment of Genetic Diseases,0.1016/j.jecm.2014.03.005