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Wavefront aberrations and the depth of focus of the human eye Thesis submitted by Fan Yi BEng, MEng A thesis submitted in fulfilment of the requirements for the degree of Doctor of Philosophy School of Optometry Institute of Health and Biomedical Innovation Faculty of Health Queensland University of Technology Brisbane, Australia 2010

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Wavefront aberrations and the depth of focus

of the human eye

Thesis submitted by

Fan Yi

BEng, MEng

A thesis submitted in fulfilment of the requirements for the degree of

Doctor of Philosophy

School of Optometry

Institute of Health and Biomedical Innovation

Faculty of Health

Queensland University of Technology

Brisbane, Australia

2010

1

Keywords

adaptive optics

depth of focus

eye

higher order aberrations

retinal image quality metrics

spherical aberration

vision

wavefront aberrations

2

Publications Arising from this Research

Journal article

Yi, F., Iskander, D. R., & Collins, M. J. (2010). Estimation of the depth of focus

from wavefront measurements. Journal of Vision, 10(4):3, 1-9,

http://journalofvision.org/10/4/3/, doi:10.1167/10.4.3. (Appendix D)

Conference abstracts

Yi, F., Iskander, D. R., & Collins, M. J. (2008). Spherical aberration and the

depth-of-focus in a population of normal subjects. Presented at the 4th

European

Meeting in Visual & Physiological Optics, Crete, Greece.

Yi, F., Iskander, D. R., & Collins, M. J. (2010). Subjective measurement of depth

of focus in keratoconus. Investigative Ophthalmology and Visual Science. 2010,

51: E-Abstract 4971. (Appendix E)

3

Abstract

The depth of focus (DOF) can be defined as the variation in image distance of a

lens or an optical system which can be tolerated without incurring an

objectionable lack of sharpness of focus. The DOF of the human eye serves a

mechanism of blur tolerance. As long as the target image remains within the

depth of focus in the image space, the eye will still perceive the image as being

clear. A large DOF is especially important for presbyopic patients with partial or

complete loss of accommodation (presbyopia), since this helps them to obtain an

acceptable retinal image when viewing a target moving through a range of near to

intermediate distances. The aim of this research was to investigate the DOF of the

human eye and its association with the natural wavefront aberrations, and how

higher order aberrations (HOAs) can be used to expand the DOF, in particular by

inducing spherical aberrations ( 0

4Z and 0

6Z ).

The depth of focus of the human eye can be measured using a variety of

subjective and objective methods. Subjective measurements based on a Badal

optical system have been widely adopted, through which the retinal image size

can be kept constant. In such measurements, the subject‟s tested eye is normally

cyclopleged. Objective methods without the need of cycloplegia are also used,

where the eye‟s accommodative response is continuously monitored. Generally,

the DOF measured by subjective methods are slightly larger than those measured

objectively. In recent years, methods have also been developed to estimate DOF

from retinal image quality metrics (IQMs) derived from the ocular wavefront

aberrations. In such methods, the DOF is defined as the range of defocus error

that degrades the retinal image quality calculated from the IQMs to a certain level

of the possible maximum value.

In this study, the effect of different amounts of HOAs on the DOF was

theoretically evaluated by modelling and comparing the DOF of subjects from

four different clinical groups, including young emmetropes (20 subjects), young

myopes (19 subjects), presbyopes (32 subjects) and keratoconics (35 subjects). A

novel IQM-based through-focus algorithm was developed to theoretically predict

the DOF of subjects with their natural HOAs. Additional primary spherical

4

aberration ( 0

4Z ) was also induced in the wavefronts of myopes and presbyopes to

simulate the effect of myopic refractive correction (e.g. LASIK) and presbyopic

correction (e.g. progressive power IOL) on the subject‟s DOF. Larger amounts of

HOAs were found to lead to greater values of predicted DOF. The introduction of

primary spherical aberration was found to provide moderate increase of DOF

while slightly deteriorating the image quality at the same time. The predicted

DOF was also affected by the IQMs and the threshold level adopted.

We then investigated the influence of the chosen threshold level of the IQMs on

the predicted DOF, and how it relates to the subjectively measured DOF. The

subjective DOF was measured in a group of 17 normal subjects, and we used

through-focus visual Strehl ratio based on optical transfer function (VSOTF)

derived from their wavefront aberrations as the IQM to estimate the DOF. The

results allowed comparison of the subjective DOF with the estimated DOF and

determination of a threshold level for DOF estimation. Significant correlation was

found between the subject‟s estimated threshold level for the estimated DOF and

HOA RMS (Pearson‟s r=0.88, p<0.001). The linear correlation can be used to

estimate the threshold level for each individual subject, subsequently leading to a

method for estimating individual‟s DOF from a single measurement of their

wavefront aberrations.

A subsequent study was conducted to investigate the DOF of keratoconic subjects.

Significant increases of the level of HOAs, including spherical aberration, coma

and trefoil, can be observed in keratoconic eyes. This population of subjects

provides an opportunity to study the influence of these HOAs on DOF. It was

also expected that the asymmetric aberrations (coma and trefoil) in the

keratoconic eye could interact with defocus to cause regional blur of the target. A

dual-Badal-channel optical system with a star-pattern target was used to measure

the subjective DOF in 10 keratoconic eyes and compared to those from a group of

10 normal subjects. The DOF measured in keratoconic eyes was significantly

larger than that in normal eyes. However there was not a strong correlation

between the large amount of HOA RMS and DOF in keratoconic eyes. Among all

HOA terms, spherical aberration was found to be the only HOA that helped to

significantly increase the DOF in the studied keratoconic subjects.

5

Through the first three studies, a comprehensive understanding of DOF and its

association to the HOAs in the human eye had been achieved. An adaptive optics

system was then designed and constructed. The system was capable of measuring

and altering the wavefront aberrations in the subject‟s eye and measuring the

resulting DOF under the influence of different combination of HOAs.

Using the AO system, we investigated the concept of extending the DOF through

optimized combinations of 0

4Z and 0

6Z . Systematic introduction of a targeted

amount of both 0

4Z and 0

6Z was found to significantly improve the DOF of

healthy subjects. The use of wavefront combinations of 0

4Z and 0

6Z with opposite

signs can further expand the DOF, rather than using 0

4Z or 0

6Z alone. The

optimal wavefront combinations to expand the DOF were estimated using the

ratio of increase in DOF and loss of retinal image quality defined by VSOTF. In

the experiment, the optimal combinations of 0

4Z and 0

6Z were found to provide a

better balance of DOF expansion and relatively smaller decreases in VA.

Therefore, the optimal combinations of 0

4Z and 0

6Z provides a more efficient

method to expand the DOF rather than 0

4Z or 0

6Z alone.

This PhD research has shown that there is a positive correlation between the DOF

and the eye‟s wavefront aberrations. More aberrated eyes generally have a larger

DOF. The association of DOF and the natural HOAs in normal subjects can be

quantified, which allows the estimation of DOF directly from the ocular

wavefront aberration. Among the Zernike HOA terms, spherical aberrations

( 0

4Z and 0

6Z ) were found to improve the DOF. Certain combinations of 0

4Z and

0

6Z provide a more effective method to expand DOF than using 0

4Z or 0

6Z alone,

and this could be useful in the optimal design of presbyopic optical corrections

such as multifocal contact lenses, intraocular lenses and laser corneal surgeries.

6

Table of Contents

Chapter 1. Introduction

20

1.1 Background 20

1.2 significance 21

1.3 Objectives 21

1.4 Scope of the thesis 21

Chapter 2. Literature review 23

2.1 Accommodation, presbyopia and depth of focus

23

2.1.1 Mechanism of presbyopia and statistics of its progression 23

2.1.2 Methods for presbyopic correction 23

2.1.3 The depth of focus of human eye 28

2.2 Wavefront aberration and retinal image quality 32

2.2.1 Wavefront aberrations 32

2.2.2 Representing wavefront aberrations 34

2.2.3 Wavefront sensing for the human eye 37

2.2.4 Monochromatic wavefront aberrations in normal human eye 40

2.2.5 Factors affecting higher order aberrations in the human eye 42

2.2.6 Wavefront aberrations, retinal image quality, and retinal image quality metrics 50

2.3 Summary of literature review and design of studies 54

Chapter 3. Modelling the depth of focus in different refractive groups 58

3.1 Introduction

58

3.2 Methods and subjects 60

3.2.1 Subjects 60

3.2.2 Wavefront aberrations 60

3.2.3 Depth of focus 61

3.2.4 Predicting DOF of subjects with the presence of original LSA 63

3.2.5 Estimating the effect of varying the longitudinal spherical aberration on DOF

64

3.3 Results

66

7

3.3.1 HOA comparison between clinical groups 66

3.3.2 Peak value of each image quality parameter for the four population group 67

3.3.3 Comparison of predicted DOF between groups 70

3.3.4 Influence of threshold level to the predicted DOF 71

3.3.5 Comparison of response to changes of spherical aberration in different clinical

groups

72

3.3.6 Effect of varying spherical aberration on DOF of presbyopes 74

3.3.7 Model of positive LSA induced by refractive surgery and its effect on DOF of

myopic subjects

76

3.4 Discussion 77

Chapter 4. Estimation of depth of focus from wavefront measurements 81

4.1 Introduction

81

4.2 Subjects and methods

81

4.2.1 Subjects 81

4.2.2 Apparatus 82

4.2.3 Protocol 83

4.2.4 Determination of the threshold for estimating DOF from wavefront data 85

4.2.5 Statistical analysis 88

4.3 Results 89

4.3.1 Individual matching threshold for the subjects 89

4.3.2 Comparison of predicted DOF of subjects from three different clinical groups 92

4.4 Discussion 94

Chapter 5. Subjective measurement of depth of focus in keratoconic eyes 98

5.1 Introduction

98

5.2 Methods

99

5.2.1 Subjects 99

5.2.2 Apparatus 100

5.2.3 Protocol 101

5.2.4 Wavefront and topographic data collection 103

5.2.5 Data analysis 103

8

5.3 Results

105

5.3.1 The effect of cycloplegia on DOF 105

5.3.2 Results of measurements in keratoconic subjects 106

5.3.3 Comparison between the left and right eye of keratoconic subjects 109

5.4 Discussion 110

Chapter 6. Design and construction of the adaptive optics system 113

6.1 Introduction 113

6.1.1 Origins and basic theory of AO 113

6.1.2 Reviewed designs of AO systems 114

6.2 Design and modification of the AO system

119

6.3 Calibration and evaluation of the system performance 123

6.3.1 Elimination of the effect of laser spackle and corneal reflection 123

6.3.2 Calibration of the wavefront measuring function with the HASO32TM

wavefront

sensor

124

6.3.3 Calibration of the wavefront generating function with the Mirao52TM

deformable mirror

127

6.3.4 Closed-loop correction with the AO system 131

Chapter 7. Expanding depth of focus in the human eye through optimal

combinations of primary and secondary spherical aberration

135

7.1 Introduction

135

7.2 Methods

136

7.2.1 Extending the DOF in a model eye 136

7.2.2 Extending the DOF in virtual eyes 141

7.2.3 Measurement of DOF in real eyes 143

7.3 Results

149

7.3.1 Effect of different combinations of 0

4Z and 0

6Z on the DOF of real eyes 150

7.3.2 Effect of combinations of 0

4Z and 0

6Z on centre of focus (COF) 154

7.4 Discussion and conclusion 156

9

Chapter 8. Conclusion and summary of the thesis 162

8.1 Influence of HOAs on the depth of focus 162

8.1.1 Modelling the DOF in different clinical groups 162

8.1.2 Estimation of DOF from wavefront measurements 164

8.1.3 Subjective measurement of DOF in keratoconic eyes 165

8.2 Design and construction of the AO system for experiments 165

8.3 Expanding the DOF in the human eye through optimal combinations of

primary and secondary spherical aberrations

166

8.4 Future directions 168

8.5 Conclusion 169

References 171

Appendices 200

Appendix A: Calibration results of HASO against COAS in 10 real eyes 201

Appendix B: Reading wavefront data from HASO measurements 211

Appendix C: Consent form 213

Appendix D: Published paper 1 214

Appendix E: Conference abstract 1 223

10

List of Figures

Figure 2.1 Diagram of optical zones in a typical PAL lens. 25

Figure 2.2 Pupil size and its effect on image formation of a centre-

distance MF CL.

26

Figure 2.3 Schematic depiction of the depth of focus and depth of field. 28

Figure 2.4 Wavefront aberration in an aberrated eye. 33

Figure 2.5 First 28 terms of the Zernike polynomials. 35

Figure 2.6 Refractive errors in the human eye. 36

Figure 2.7 Concept of an aberrometer based on the Scheiner-Hartmann-

Shack principle.

38

Figure 2.8 Grid pattern of (a) the ideal wavefront, and of (b) an

aberrated wavefront.

39

Figure 2.9 (a) PSF of a diffraction limited eye, and (b) PSF of an

aberrated eye, both in a 6 mm pupil.

51

Figure 2.10 Effect on retinal image of different Zernike terms. 52

Figure 2.11 Objectives and designed studies. 56

Figure 3.1 An example of the estimated modulation transfer function.

Azimuthally-averaged data at 5, 10 and 15 cpd are used as

the first three image quality metrics.

61

Figure 3.2 Flowchart of the computer simulation. (a) Algorithm for

calculating the DOF with originally present amount of LSA.

(b) Algorithm for calculating the DOF as a function of LSA.

62

Figure 3.3 DOF(LSA) estimate for subject CW. (a) through-focus

)10(

MTF at different levels of LSA. (b) 3D result of the

DOF(LSA) estimator. (c) top-view map of (b).

65

Figure 3.4 Higher order aberration (HOA) RMS values of the four

groups, consisting of young emmetropes, young myopes,

presbyopes and keratoconics for 5 mm and 3.5 mm pupil

diameters.

66

Figure 3.5 Examples of the estimated DOF(LSA) for different subjects

from each of the considered clinical groups.

73

Figure 3.6 Simulated average influence of LSA on DOF in presbyopic

group in (a) a 5 mm, and (b) a 3.5 mm pupil diameter .

74

Figure 3.7 Retinal images simulation with different levels of LSA and

defocus for a presbyopic subject DFB. This subject was

representative of the presbyopic group and had +0.175 D of

natural longitudinal spherical aberration.

75

Figure 3.8 Simulated average effect of positive LSA on DOF of the

myopic group for (a) a 5 mm, and (b) a 3.5 mm pupil

diameter.

76

Figure 3.9 The effect of interaction of the primary and 0.05 µm of 79

11

secondary SA on DOF.

Figure 4.1 Wavefront sensing system to monitor the ocular wavefront

aberration and measure the depth of focus.

82

Figure 4.2 Flow chart of simulation program for calculating through-

focus VSOTF.

86

Figure 4.3 Estimation of matching threshold based on through-focus

VSOTF.

88

Figure 4.4 Correlation between the estimated threshold and HOA RMS

(a) in a 5mm pupil, and (b) in a 3.5mm pupil. Solid line is the

linear regression and dashed line is the 95% confidence band.

91

Figure 4.5 Algorithm to estimate DOF with a predetermined threshold

from aberrations.

93

Figure 5.1 The two-channel Badal system. L1 and L2 are the Badal

lenses, PM is a first surface mirror and CBS is a 50:50 cube

beam splitter.

100

Figure 5.2 Group mean HOA of normal and keratoconic eyes. 107

Figure 6.1 Schematic concept of a basic AO system for vision science. 114

Figure 6.2 The first generation Rochester AO system (Liang, Williams &

Miller, 1997).

115

Figure 6.3 Changes of optical layout in the second generation Rochester

AO system (Hofer et al., 2006).

117

Figure 6.4 Badal stage used in Murcia AO system (Fernández et al.,

2001).

118

Figure 6.5 Schematic diagram of the KTH AO system ( Lundström et

al., 2007).

119

Figure 6.6 Schematic diagram of the first design of the AO system. 120

Figure 6.7 Optical layout of the developed AO system. 122

Figure 6.8 Hartmann-Shack spot images with the vibrating mirror (a)

off, and (b) on.

124

Figure 6.9 Measurement results of HOAs by COAS and HASO32 for a

6 mm pupil.

125

Figure 6.10 Comparison of wavefront aberrations measured by COAS

and HASO32 from two subjects in a 6 mm pupil.

126

Figure 6.11 Selected Zernike polynomials generated by the Mirao52 DM

measured by the HASO32 wavefront sensor. R is the

amplitude of the Zernike coefficient, which can be reliably

generated, and E presents the error.

128

Figure 6.12 Generation of pure (a) 0

4Z , and (b) 0

6Z with the AO system. 129

Figure 6.13 Generation of combinations of 0

4Z and 0

6Z with the AO

system.

130

12

Figure 6.14 Wavefront aberrations measured from a misaligned myopic

model eye (a) with the AO off, and (b) with the AO on.

133

Figure 6.15 Wavefront aberrations measured from a real eye (a) with the

AO off, and (b) with the AO on.

134

Figure 7.1 (a) A flow chart of the through-focus simulation algorithm to

theoretically estimate the DOF with different combinations of 0

4Z and 0

6Z Zernike polynomials terms. (b) An example of

the output of the through-focus simulation.

138

Figure 7.2 The effect of primary and secondary spherical aberrations on

the DOF of a diffraction-limited model eye.

141

Figure 7.3 Optical layout of the AO system. 146

Figure 7.4 Effect of pupil offset on the combination of wavefront

aberrations.

149

Figure 7.5 Effect on DOF by introduction of (a) 0

4Z alone (b) 0

6Z alone,

and (c) combinations of 0

4Z and 0

6Z . All plots (a), (b) and (c)

have common x and y scale to aid comparison between

different conditions.

151

Figure 7.6 Decrease in VA [logMAR] of real eyes with the introduction

of (a) 0

4Z alone (b) 0

6Z alone, and (c) combinations of 0

4Z

and 0

6Z with opposite signs. Cases in which one or more

subjects did not satisfy the best achievable VA of

0.2 logMAR criterion are indicated in red color. All plots (a),

(b) and (c) have common x and y scale to aid comparison

between different conditions.

152

Figure 7.7 ∆DOF versus ∆VA induced by 0

4Z , 0

6Z and combinations of

0

4Z and 0

6Z . The size of symbol represents the number of

occurrence of data.

153

Figure 7.8 Shift of centre of focus (COF) caused by introduction of (a) 0

4Z alone; (b) 0

6Z alone, and (c) combinations of 0

4Z and

0

6Z .

155

Figure 7.9 (a) Wavefront combination of 0.4 µm of 0

4Z and 0.2 µm of 0

6Z and its through-focus point spread function shown in (c);

(b) Wavefront combination of 0.4 µm of 0

4Z and 0.2 µm of 0

6Z and its though-focus point spread function shown in (d).

159

Figure 8.1 Flowchart of the three steps (five studies) accomplished in

this study.

163

13

List of Tables

Table 2.1 Studies of monochromatic wavefront aberrations in normal

human eyes.

40

Table 3.1 Group mean of peak values of each IQM predicted from the

original wavefront aberrations of the subjects.

68

Table 3.2 Group mean of predicted DOF (80% threshold) of the

subjects using a range of image quality metrics (IQMs).

69

Table 3.3 Group mean of predicted DOF (50% threshold) of the

subjects using a range of image quality metrics (IQMs).

69

Table 4.1 Group average results in a 5mm pupil and a 3.5mm pupil

diameter.

89

Table 4.2 Group mean of estimated DOF of the three refractive groups. 93

Table 5.1 The effect of cycloplegia on DOF, HOA RMS and spherical

aberration in a 5 mm pupil.

106

Table 5.2 Results of keratoconic eyes. 108

Table 5.3 Comparison between the left and right eye. 109

Table 6.1 Major differences of the COAS and HASO32 wavefront

sensor.

124

Table 6.2 Correlation of Zernike HOA coefficients measured by

COAS and HASO in a 6 mm pupil.

125

Table 6.3 Combinations of 0

4Z and 0

6Z can be generated using the AO

system.

131

Table 7.1 Mean predicted change in DOF (D) of up to 100 virtual eyes

by the addition of the 41 various combinations of 0

4Z and

0

6Z .

143

Table 7.2 Higher order ocular aberrations of the six measured eyes for

a 6 mm pupil.

145

Table 7.3 Mean changes of DOF and standard deviation of real eyes

with the introduction 0

4Z and 0

6Z alone and in combination

(with opposite signs).

150

Table 7.4 Optimal combination of wavefront to extend DOF for each

subject.

154

14

List of Abbreviations

3D: Three dimensional

AO: Adaptive optics

AIOL: Accommodative intraocular lens

BIF: Bifocal spectacle

CBS: Cube beam splitter

CCD: Charge-couple device (stands for a CCD camera in this thesis)

CHOA: Corneal higher order aberrations

COAS: Complete Ophthalmic Analysis System

COF: Centre of focus

cpd: Cycles per degree

CSF: Contrast sensitivity function

D: Dioptre

DM: Deformable mirror

DOF: Depth of focus

HOA: Higher order aberration

IOL: Intraocular lens

IQM: Image quality metric

LASIK: Laser in situ keratomileusis

LD: Laser diode

LED: Light emitting diode

LSA: Longitudinal spherical aberration

MFCL: Multifocal contact lens

MTF: Modulation transfer function

MV: Monovision

MVCL: Monovision contact lens

OPD: Optical path difference

15

OPL: Optical path length

OTF: Optical transfer function

PAL: Progressive addition lens

PBS: Pellicle beam splitter

PRK: Photorefractive keratectomy

PSF: Point spread function

PTF: Phase transfer function

RGP contact lens: Rigid gas permeable contact lens

RMS: Root mean square

SA: Spherical aberration

S/C: Sphero-cylinder

SD: Standard deviation

SV: Single vision

VA: Visual acuity

VM: Vibrating mirror

VSOTF: Visual Strehl ratio based on the optical transfer function

16

List of Main Symbols

),( yxA Amplitude transmittance at the point ),( yx

),( C corneal surface

,ˆresC

approximated residual corneal elevation

NCSF neural contrast sensitivity function

F refractive power

)(

MTF azimuthally-averaged modulation transfer function

DLOTF diffraction limited optical transfer function

yxP , pupil function

W ),( wavefront aberration

X, Y distances perpendicular to optical axis

Z optical axis

pZ ),( pth Zernike polynomial

0

4Z , 0

6Z Zernike polynomial terms for primary and secondary spherical

aberration

Z wavefront to refractive power transformation

1

inverse transformation from the refractive power domain to the

wavefront domain

pa coefficient associated with ),( pZ

d distance from the pupil center to the peak of cone

0d distance of the peak of cone from the keratoscopic axis

17

Offsetd offset between keratoscopic axis and pupil center

ε ),( measurement and modelling error (noise)

),( 00 yxf object

yx ff , spatial frequency components in the x and y plane

),( yxg retinal image

k k =2π/λ, wave number

n, n’ refractive indices on incident and refraction sides of a surface

p polynomial-ordering number, p =1, 2… P

r pupil radius

maxr max pupil radius

th threshold

ρ normalized distance from the origin

θ angle

azimuthally-average

λ wavelength

∆ difference

the convolution operation

complex conjugate

18

Statement of Original Authorship

The work contained in this thesis has not been previously submitted to meet

requirements for an award at this or any other higher education institution. To the

best of my knowledge and belief, the thesis contains no material previously

published or written by another person except where due reference is made.

Signature

Date

19

Acknowledgments

I would like to thank all the people who have assisted me through the preparation

and completion of this thesis. In particular, I sincerely wish to express my thanks

and appreciation to my supervisors, Dr. Robert Iskander, Prof. Michael Collins,

Dr. Peter Hendicott and Dr. Alyra Shaw, who have guided me from the

commencement to the successful completion of my study. Without their guidance

and encouragement, I would not have been able to reach this point.

To Prof. David Atchison and Prof. Joanne Wood, who were the panel members of

my final seminar, my thanks for their valuable comments on the thesis and on my

seminar.

To Mr. Brett Davis, my thanks for his help during the construction of the adaptive

optics system and a lot of useful discussion.

To my friends, Mr Atanu Ghosh, Mrs Beata Sander, Mr Ben Straker, Mr David

Alonso Caneiro, Dr Dorota Szczesna, Ms Emily Woodman, Ms Garima Tyagi,

Ms Payel Chatterjee, Mr Ranjay Chakraborty, Dr Scott Read, Ms Shila Roshani

and Mr Stephen Vincent, thanks for giving me a lot of happy memories in the lab.

Special thanks to all the subjects participated in my experiments. Without their

help, I won‟t be able to finish the study.

Finally and foremost, I would like to thank my parents and my wife, who gave

me so much support to study in Australia.

20

Chapter 1. Introduction

1.1 Background

Accommodation in the human eye refers to the ability of the crystalline lens to

change shape in order to bring objects at different distances into focus. As such, it

has an essential contribution to visual performance. It is well known that the

accommodation of the lens decreases with age (presbyopia), affecting daily near

work activities. The majority of people begin to notice some effects of presbyopia

by the mid-forties and need to use presbyopic vision corrections to help regain

near vision for daily activities. The reduction of the lens‟ accommodation ability

is continuously progressing until the eye is permanently focused at a single

distance. This process of presbyopia is irreversible.

Current methods that help presbyopes to regain near vision include reading

spectacles, bifocal spectacles, progressive spectacles, and bi- and multi-focal

contact lenses. Monovision contact lenses (one eye for near and one eye for

distance vision) and surgically inserted intraocular lenses are also widely adopted.

However, all current forms of presbyopia correction come with certain limitations.

One of the major problems is that many of the techniques provide two optical foci,

one optimized for near and one for distance vision. When the object is located

between the far distance and the near distance, the presbyope‟s vision is

compromised. Patients wearing spectacles providing multi-focal distances or

progressive addition lenses may also have difficulties to quickly align their line of

sight with the appropriate optical zone of the lens.

Another technique for treating presbyopia is to extend the depth of focus (DOF)

in the human eye, which is similar to the idea of focal range enhancement in

digital imaging. In the field of digital imaging, attempts to increase the depth of

focus have been extensively investigated, especially for microscopic imaging and

passive range detection. While a presbyopic eye with limited accommodation can

be approximated as a single focus lens, the methods to extend DOF in optical

systems could also have significant advantages for correcting presbyopia in the

human eyes.

21

1.2 Significance

The majority of people over 45 years of age need to use presbyopic vision

corrections to help regain near vision for daily activities. While all current

methods of presbyopic correction come with certain limitations, extending the

DOF of the eye could be used as an alternative method to correct presbyopia. It is

known that HOAs help to extend the DOF while compromising the on-axis visual

performance. Adding spherical aberration, for example, has also been used as a

passive clinical approach to extend the DOF in some designs of presbyopic

corrections. However, little has been known about the interaction of aberrations

in the human eye and how they can affect the DOF. There is an important gap in

the literature as the methods currently available for presbyopic correction have

typically not taken into account the influence of combinations of HOA to the

DOF, other than spherical aberration alone.

1.3 Objectives

The aim of this research study is to investigate the interaction between the DOF

and the wavefront aberrations of the eye, with a view of using wavefront

aberrations to expand the DOF. In order to achieve the aim of the study, the

following objectives need to be accomplished:

1. Estimation of the relationship between higher order aberrations (HOAs) and

depth of focus (DOF) in the eye and estimation of some candidate

wavefront aberrations to extend the DOF

2. Design and construction of an adaptive optics (AO) system.

3. Apply the pre-determined aberrations to the eye with the aid of the

developed AO system and evaluate their efficiency to extend the DOF.

1.4 Scope of the thesis

The thesis contains eight chapters. An overview of each chapter is given below:

Chapter 1 gives an introduction to the background and the motivation behind the

research. The main objectives and an overview of the thesis scope are also

provided.

22

Chapter 2 introduces the background of extending the DOF in human eye.

Specifically, it gives an extensive literature review on: (i) accommodation,

presbyopia and presbyopic corrections, (ii) DOF in the human eye, and the

factors which can affect the DOF, (iii) wavefront aberrations of the human

eye and its connection to DOF, and (iv) retinal image quality and image

quality metrics (IQM) derived from the wavefront aberration.

Chapter 3 presents the image quality metric (IQM) based methods of

theoretically estimating the DOF from wavefront aberrations. A customized

through-focus algorithm is used to model the theoretical DOF of subjects

from different clinical groups and predict the effect of inducing spherical

aberration to the DOF of myopic and presbyopic subjects.

Chapter 4 describes the development of an algorithm to estimate the threshold

level for IQMs, which would correlate with the subjectively measured DOF

and lead to a method for estimating DOF directly from a measurement of

wavefront aberrations. This algorithm is applied to estimate and compare the

DOF of subjects used in the previous chapter.

Chapter 5 investigates the subjective DOF in patients with keratoconus. A

method allowing measurement of the subjective DOF without the use of

cycloplegia is described. The measured DOF from keratoconic eyes are

compared to those of normal subjects.

Chapter 6 presents the design and construction of an AO system, which is used

to carry out the experiments of extending DOF with HOAs in this study.

This chapter also gives an introduction of the AO technology and a review of

different designs of AO systems used for visual sciences.

Chapter 7 describes the experiment of extending DOF with HOAs. In this

chapter, the optimal wavefront combinations are derived from a through-

focus simulation. The efficiency of these wavefront combinations in

expanding DOF is first evaluated in a group of “virtual eyes” and then

applied to the real eyes with the aid of an AO system.

Chapter 8 presents the conclusions and summary of the thesis.

23

Chapter 2. Literature review

2.1 Accommodation, presbyopia and depth of focus

2.1.1 Mechanism of presbyopia and statistics of its progression

The mechanism of accommodation has been studied for more than three hundred

years (Descartes, 1677; Young, 1801; Helmholtz, 1866). The most widely

accepted explanation of the mechanism of accommodation is based on the theory

of Helmholtz (1866), which suggests that accommodation is achieved by the

crystalline lens changing its shape. When the eye is unaccommodated and focuses

at its far point, the zonules on the lens pull and flatten the lens. When the eye

accommodates, the lens forms a more spherical shape to bring near targets into

focus. The ability of accommodation in the human eye declines throughout life

from birth onwards (Atchison, 1995; Hermans et al., 2008). A young person‟s eye

normally has accommodation of about 8 dioptres (Hamasaki, Ong & Marg, 1956),

which declines to about half before middle age and drops to near zero dioptre

when the person reaches their mid-fifties.

The decline of accommodation starts to become a problem for most people in

their middle age (after about 45 years of age), when they can no longer clearly see

near targets. This is the condition called presbyopia. The exact onset of

presbyopia can be affected by multiple factors, such as general health, race, diet,

geographic latitude, radiant exposure, and near working habits (Holden et al.,

2008).

There has been a continuous transition into an aging society worldwide in the last

fifty years (UN, 2001). It is predicted that one in three people will be over 60

years old in developed countries by 2050 (UN, 2001). The demands for

presbyopic corrections will increase as the population of people aged 45 years

and above continues to increase.

2.1.2 Methods for presbyopic correction

Currently the correction of presbyopia can be achieved by a variety of methods

including non-surgical and surgical options to help the patients regain near vision

for daily activities such as computer works and reading. Non-surgical methods for

24

presbyopia correction include the use of spectacles and contact lenses. Based on

different optical designs, the most popular non-surgical options are spectacles and

contact lenses such as bifocal lenses (BIF), multi-focal contact lenses (MF),

progressive addition lenses (PAL) and monovision (MV). Surgical options

include laser corneal ablation to create monovision or multifocal effect, corneal

inlays and the use of intraocular lenses (Jain, Arora & Azar, 1996; Agarwal, 2002;

Davison & Simpson, 2006; Yilmaz et al., 2008).

Bifocal spectacles

It is reported that approximately 16% of the presbyopic population are prescribed

with bifocal and trifocal spectacles (Nichols, 2009). The BIF was invented by

Benjamin Franklin in the mid 1700s. Compared to the single vision (SV) reading

glasses, it provides two optical correction zones in the same lens, which allows

clear vision both for far distance and a near distance. One disadvantage of the BIF

is that the upper and lower portions of the lens providing different optical powers

are divided by a visible line. An apparent displacement of object known as “prism

jump” can be observed by the patients when they switch their line of sight from

the distant to near optical zone (Johnson, Elliott & Buckley, 2009). Although the

BIF design provides clear vision for both distance and near vision zone, the

objects located at intermediate distances can not be focused clearly unless the

wearer has sufficient residual accommodation.

PAL spectacles

PAL spectacles are the most widely adopted measure to treat presbyopia today

(Sheedy, 2004; Meister & Fisher, 2008); The purpose of PAL designs is to

provide the presbyopes with clear vision through a range of viewing distances

without image jump and clear boundaries between different focal zones of the

lens (Atchison 1987, 1992). A diagram of optical zones in a typical PAL lens is

shown in Figure 2.1.

25

Figure 2.1 Diagram of optical zones in a typical PAL lens.

There are four main optical zones on the PAL lens surface: a distance zone at the

upper part for distant viewing; in the middle part of the lens, an intermediate zone

(corridor) for viewing objects at a range of intermediate distances; a near zone at

the lower part of the lens providing power for near vision tasks (Atchison 1987).

The intermediate corridor of progressively increasing power is created by a non-

rotationally symmetrical aspheric surface, which produces unwanted aberrations,

resulting in distorted vision through the lower peripheral zones of the lens. This

distortion can not be removed completely, and when the wearers look through the

peripheral zones they may experience the uncomfortable feeling of distortion or

apparent motion in the visual field (Simonet, Papineau, & Lapointe, 1986).

Another problem of the PAL design is that, the light rays may pass areas of

different refractive power before entering the eye, and therefore, form a less clear

image (Burns, 1995; Selenow et al., 2002). There are also reports that due to the

smaller clear vision zone of PALs, greater eye and head movements are required

for PAL wearers when they are performing reading tasks (Han et al., 2003) and

driving (Chu, Wood & Collins, 2009) compared to the patients with SV

correction.

Multifocal contact lenses (MFCLs)

MFCLs provide two or more dioptric powers within the optical zone of the

contact lens, which aim to help the patients to obtain clear vision across a range

of distances. Common designs of MFCL include arranging different dioptric

power zones as multiple concentric rings or adopting an aspheric surface, which

26

provides progressive change of power from the centre to periphery. With such

designs, partial focus is achieved for both distant and near objects at the same

time. The visual system then uses the image in-focus for the object at the desired

distance, while the out-of-focus image reduces overall image quality. One

problem of this design is that, since the in-focus and out-of-focus images are

presented to the eye simultaneously, there is acuity and contrast loss due to the

partial focus (Koffler, 2002; Bennett, 2008). Decrease of distant visual acuity

(VA) (Sanders, Wagner & Reich, 2008) and contrast sensitivity at higher spatial

frequencies (Collins, Brown & Bowman, 1989) were both observed for the

MFCL users compared to the patients wearing spectacles. The effect of MFCL is

also limited by the pupil size, since it changes the relative coverage of the optical

zone for near and distance vision. As shown in Figure 2.2, for a MFCL of centre-

distance aspheric design, a smaller pupil size will limit the performance of near

vision. On the other hand, the distance vision will be compromised when the

pupil becomes bigger.

Figure 2.2 Pupil size and its effect on image formation of a centre-distance MF

CL.

Monovision contact lens

Monovision contact lens (MVCL) is another approach for presbyopia correction

(Jain, Arora & Azar, 1996; Bennet, 2008). This technique uses conventional

single vision contact lenses, fitting the dominant eye with distance correction and

the fellow eye with near correction (Evans, 2007). When the subject is focusing at

an object, the in-focus image and out-of-focus image produced by both eyes are

presented to the vision system at the same time. A period of adaption could be

27

required for some subjects to choose the right image (Collins et al., 1994).

Reduction of stereoacuity is reported in MVCL wearers depending on the

magnitude of the addition power (Kirschen, Huang & Nakano, 1999). The

constant monocular blur induced by MV also affects the subject‟s visual function

resulting in degraded distance VA and contrast sensitivity (Collins, Goode &

Brown, 1993) compared to the spectacle users.

Surgical options for presbyopic correction

Although corrective lenses provide a solution for daily activities involving near

work, some presbyopic patients choose to undergo refractive surgery of the

cornea to reduce their dependency on glasses and contact lenses. This treatment

can produce a permanent effect of monovision to provide close vision in the non-

dominant eye (Agarwal, 2002). However, this approach may result in

compromised binocular function and also require a prolonged adaption period

(Reilly et al., 2006).

Another procedure used by some ophthalmologists is insertion of bifocal

intraocular lenses (IOL) in each eye (Agarwal, 2002). The synthetic lens implant

is designed to allow the patient to see objects at distance or near. A modified IOL

surgery uses a multifocal intraocular lens in the patient‟s non-dominant eye, to

achieve a similar effect of monovision with a multifocal lens (so called modified

monovision).

Insertion of accommodating IOLs (AIOLs) that are able to change either their

shape or position in response to the ciliary muscle contraction is one surgical

technology recently developed, attempting to restore true accommodative

function to presbyopic eyes (Menapace et al., 2007; Glasser, 2008; Schor &

Charles, 2009). A range of AIOL designs are now available for surgical use

(Cumming et al, 2006; Doane & Jackson, 2007; Brown et al, 2009) or still

undergoing development. Since AIOL is still a newly developed technique, there

is a lack of longitudinal clinical data to evaluate the long term performance of the

correction. Also, the amplitude of accommodation provided by the current

designs of AIOLs is limited, which is insufficient to provide the optical power for

daily function without additional aids (Wolffsohn et al., 2006; Doane & Jackson,

2007; Glasser, 2008; Comander & Pineda, 2010).

28

A possible alternative technique for treating presbyopia is to extend the depth of

focus in the human eye. While a presbyopic eye with limited accommodation can

be approximated as a single focus lens, the methods to extend depth of focus

could have significant advantages for correcting presbyopia.

2.1.3 The depth of focus of human eye

The depth of focus in the human eye can be defined as the range of focusing error

which can be tolerated without incurring an objectionable lack of sharpness in the

retinal image (Schapero, Cline & Hesdorffer, 1968). It is a focus tolerance

mechanism of the eye that is of interest to modern refractive surgery and

ophthalmic lens design (Wang and Ciuffreda, 2006).

Although the human eye is regarded as a complex optical system, one can

consider the entire optical system as a single, high power positive lens. When the

accommodation of the eye is set at a constant state, the depth of focus and its

dioptric interval projection in the free space (Ogle, 1968), the depth of field of the

human eye are schematically illuminated in Figure 2.3. When the target (shown in

Figure 2.3 as “E”) moves within the depth of field in object space, its retinal

image will remain within the depth of focus in image space, and the eye will

perceive no significant change of clarity of the target.

Figure 2.3 Schematic depiction of the depth of focus and depth of field.

The ultimate goal of vision correction to provide a high standard of acuity and

contrast sensitivity over a full range of object distances in different lighting

conditions. Subjects of different ages with different lifestyles and occupations

may have their own understanding of what constitutes a good vision (Owsley &

Sloane, 1987). A young subject may prefer a comprehensive correction of both

conventional and higher order aberrations (HOA) to achieve close to diffraction

limited monochromatic optical performance. However, for a presbyope, some

functional improvement of vision across a range of distances, which helps to

29

compensate their loss of accommodation, would benefit the patient more in the

daily life activities.

DOF has long been an important concept in general optics. However, the DOF of

the human eye did not gain much attention until the 1950s (VonBahr, 1952,

Campbell, 1957, Campbell and Westheimer, 1958, Ogle and Schwartz, 1959).

Since then, different groups have concentrated on estimating the DOF in the

human eye either subjectively (Charman and Whitefoot, 1977, Green et al., 1980,

Legge et al., 1987, Atchison et al., 1997) or objectively (Ludlam et al., 1968,

Vasudevan et al., 2006). To assess the DOF subjectively, the accommodation of

the subject‟s eye need to be paralysed pharmacologically. A movable target is

then placed in front of the eye to find out the distance through which, the target is

viewed clearly without the perception of blur. This range of distance is the

subjective DOF. In an objective measurement, on the other hand, the

accommodation of the eye would not be paralysed and the subject‟s

accommodation response is continuously monitored. The range of distance the

target can be displaced without causing any change in the state of accommodation

is the objective DOF. The subjective DOF is typically larger than the DOF

measured objectively (Vasudevan, Ciuffreda & Wang, 2007).

The subjective DOF can be assessed using a variety of methods based on a range

of different criteria (Atchison, Charman & Woods, 1997; Marcos, Moreno &

Navarro, 1999). The most frequently used criteria include decrease of visual

acuity, perception of just detectable image blur, and loss of visibility of target

details (Wang & Ciuffreda, 2006). Because of different stimulus and

methodologies adopted, studies have shown a wide range of DOF values

(Campbell, 1957; Oshima, 1958; Charman & Whitefoot, 1977; Legge et al, 1987;

Atchison, Charman & Woods, 1997; Marcos, Moreno & Navarro, 1999) from as

low as 0.02 D (Oshima, 1958) to as large as 3.6 D (Charman & Whitefoot, 1977).

DOF in the eye can be affected by different factors, which are categorized as

internal and external factors. External factors refer to the properties of the visual

target and test environment, whereas internal factors refer to the optical properties

of the eye, and retinal and visual processing properties of the individual‟s neural

system. The effects of external factors of targets and environment, and optical

30

properties of the eye to the DOF have been extensively studied by different

groups. These external and internal factors are further divided (Atchison and

Smith, 2000):

1) External factors: luminance, spatial detail, contrast, and spectral profile (e.g.

colour of the target).

The DOF decreases as the target or environment luminance increases (Campbell,

1957; Tucker & Charman, 1986). Some studies show slight increase of DOF at

very low contrast levels (Campbell, 1957; Atchison, Charman & Woods, 1997).

Previous studies have shown that increase of spatial frequency or target details

cause a decrease of DeOF (Ogle & Schwartz, 1957; Tucker & Charman, 1975,

1986; Atchison, Charman & Woods, 1997; Marcos, Moreno & Navarro, 1999).

Changes of wavelength of light cause variation in the resolving power of retina. It

was also found that the DOF is smaller near the middle of the visible spectrum,

and becomes larger towards directions of either infrared or ultraviolet wavelength

(Campbell, 1957; Marcos, Moreno & Navarro, 1999).

2) Internal factors include: pupil diameter, refractive error, and monochromatic

and chromatic aberrations, photoreceptor size and ganglion cell density,

visual acuity and contrast threshold, and disease in the optical pathway.

Change of pupil size interacts with other optical properties of the eye. It affects

the amount of light entering the eye, the magnitude of certain aberrations and the

diffraction states of the eye. When the pupil becomes smaller, the DOF increases

(Campbell, 1957; Charman & Whitefoot, 1977; Tucker & Charman 1975, 1986;

Legge et al., 1987; Atchison, Charman & Woods, 1997).

The DOF can be also affected by the higher order aberrations (HOAs). In a linear

optical system, the monochromatic HOAs and chromatic aberrations are known

to compromise the image quality (e.g., compromise the visual acuity and contrast

sensitivity at the optimal focus), but at the same time increase the DOF. This

connection between HOA and DOF has been studied by different research groups.

By applying spherical and irregular aberrations to a theoretical eye model, Nio et

al (2002) found that HOA helps to increase the DOF, while at the same time

lowering the modulation transfer at higher frequencies. A slightly larger depth of

31

focus was found in myopes (Rosenfield and Abraham-Cohen, 1999; Collins et al.,

2006; Vasudevan et al., 2006), presbyopes (Nio et al., 2000) and hyperopes

(Vasudevan et al., 2006) compared to young emmetropic subjects, which may be

partially due to their increased amount of HOA (Mclellan et al., 2001; Artal et al.,

2002; He et al., 2002; Llorente et al., 2004). For patients who have undergone

conventional laser refractive surgery, significant amounts of HOAs could be

induced (Oliver et al., 1997; Marcos, 2001; Pesudovs, 2005). Artola et al (2006)

reported delayed onset of presbyopia after photorefractive keratectomy for a

group of myopic subjects, which was believed to be due to larger DOF caused by

positive spherical aberration induced by laser corneal ablation. Different DOF

was also found in patients implanted with spherical and aspheric IOLs (Marcos et

al., 2005; Rocha et al., 2007; Nanavaty et al., 2009). The aspheric design may

degrade the distance-corrected near and intermediate visual acuity after reducing

the total spherical aberration in the eye. Recently, Rocha et al (2009) investigated

the different effect of individual 3rd and 4th order Zenike polynomial coefficients

(spherical aberration, coma and trefoil) on DOF using an AO stimulus. It was

found that certain amounts of spherical aberration can significantly enhance the

DOF, while other HOA had only minimal effect.

Currently, introducing controlled levels of spherical aberration has been adopted

clinically as a passive approach to help presbyopic patients to regain part of their

near vision with simultaneous corrections including bifocal, multifocal contact

lenses and intraocular lenses (Bradley et al., 1993; Plakitsi and Charman, 1995).

However, the application of possible optimal combination of aberrations, rather

than primary spherical aberration, to extend the DOF has not yet been

investigated.

32

2.2 Wavefront aberrations and retinal image quality

In this section, an overview is given of the wavefront aberrations in the human

eye, the methods of wavefront measurement and factors affecting the wavefront

aberrations. The way that aberrations influence the retinal image quality and

image quality metrics (IQMs), which can be used to quantify the effect, is also

reviewed.

2.2.1 Wavefront aberrations

To define the concept of wavefront aberration, it is necessary to define the

wavefront of a point light source, and before that, the concepts of optical path

length (OPL) and optical path difference (OPD).

From a clinical perspective, the most frequently used explanation for wavefront

aberration is by errors of the optical path length (OPL). The optical path length

specifies the number of times a light wave needs to oscillate travelling from point

A to another point B. It is defined mathematically as the integration of the

refractive index with respect to the distance along the ray path from A to B

(Goodman, 1996; Mahajan, 1998).

OPL = B

Adssn )( (2-1)

If the light ray is travelling in homogenous materials, it becomes the sum of

distance travelled in each material multiplied by the refractive index of that

material.

m

i

ii snOPL1

(2-2)

For an incident beam entering from the air to the cornea, the OPL can be simply

calculated by

'21 nsnsOPL (2-3)

where n and n' are refractive indices of air and the cornea respectively. Since the

propagating speed of light is slower in optically denser media, more oscillations

will occur in the eye than with the same physical distance in air. Although the

33

light rays from a point source are emitted in different directions, they have the

same OPL at any instant in time.

The wavefront is defined as the surface composed of end points of all the rays

emitted from one light resource at the same instant of time. The shape of the ideal

wavefront is a sphere, which is called the reference sphere, with its centre on the

image plane. However, due to the thickness anomalies of the tear film, corneal

distortion and other optical defects of the intraocular tissues, the aberrated

wavefront arises. The wavefront aberration is then defined as the optical path

difference (OPD) between the ideal and actual (aberrated) wavefront (Wyant &

Creath, 1992). In an aberrated eye the wavefront aberration is the departure of the

aberrated wavefront from the ideal spherical wavefront at the exit pupil.

Figure 2.4 Wavefront aberration in an aberrated eye.

As shown in Figure 2.4, when a light ray passes the ideal wavefront at M and the

actual wavefront at N, its wavefront error can be defined as the optical path

difference (OPD) between M and N. That is

NM OPLOPLOPD (2-4)

in which MOPL is the OPL from the object to M and NOPL is the OPL from the

object to N.

34

2.2.2 Representing wavefront aberrations

Wavefront aberrations are used as a general means to express the optical defects

of optical systems. Different polynomials have been suggested as the

mathematical function to express wavefront aberrations. Among them, the

Zernike polynomials are the most widely adopted tool due to the following

advantages: 1) the Zernike polynomials can be easily related to ophthalmic

sphero-cylinder refractive errors; 2) the Zernike polynomials are a complete set of

polynomials that are orthogonal over the unit circle (Thibos et al., 2000; Iskander,

Collins & Davis, 2001); 3) the sum of squares of the coefficients represents the

variance of wavefront aberration; and 4) the lower order truncated Zernike

polynomials are exchangeable with lower order Taylor expansions (Tyson, 1982;

Conforti, 1983).

Because the Zernike series is orthogonal, wavefront aberrations of the eye can be

decomposed into different Zernike modes, analysed mode by mode to study the

aberration distribution, and then recombined (Iskander, Collins & Davis, 2001).

The wavefront aberration can be modelled by a finite series of Zernike

polynomials

),(),(),(1

P

p

ppZaW (2-5)

In the above equation:

W ),( wavefront aberration,

index p polynomial-ordering number,

pZ ),( pth Zernike polynomial,

p =1, 2… P,

pa coefficient associated with ),( pZ ,

p order,

ρ normalized distance from the origin,

35

θ angle,

ε ),( measurement and modelling error (noise).

The pth-order Zernike polynomial is defined as

0 ),(1

0, odd ),sin()()1(2

0even ),cos()()1(2

),(0

mRn

mpmRn

p,mmRn

Z

n

m

n

m

n

p

(2-6)

where

! )2

( ! )2

( !

)!()1( 22/)(

0

snmn

s

sm

n

smn

smn

s

snR

(2-7)

in which n is the radial degree and m is the azimuthal frequency.

Figure 2.5 First 28 terms of the Zernike polynomials.

36

The first 28 terms of the Zernike polynomials up to the 6th

radial order are shown

in Figure 2.5. They include the lower-order aberrations (0~2nd

radial order) and

higher order aberrations (>2nd

radial order). The 0th

and 1st order terms (piston

and tilts) do not affect the image quality and are usually ignored, when wavefront

aberrations of a single eye are studied.

Figure 2.6 Refractive errors in the human eye.

The traditional spherical and cylindrical refractive errors of defocus ( 0

2Z ) and

astigmatism ( 2

2

2

2 ,ZZ ) as shown in Figure 2.6, can be also described by the lower

order Zernike polynomials. An eye with its far point of distant vision at infinity is

called an emmetropic eye. The parallel light rays from infinity will focus on its

retina (Figure 2.6a). Due to the spherical refractive error, in a myopic eye, the

image formed by parallel light is focused in front of the retina (Figure 2.6b). In

eyes with hyperopia, parallel light rays focus behind the retina as shown in Figure

2.6c. When the refractive power varies across the meridians of the pupil centre,

two perpendicular meridians with the maximum and minimum power can be

defined. This is the condition called astigmatism (Figure 2.6d).

37

2.2.3 Wavefront sensing for the human eye

Wavefront sensing is an important technique helping us to better understand the

optical quality of the eye, and providing aids to develop advanced vision

correction methods such as customized contact lenses, customized refractive

surgery and adaptive optics (Yoon, 2006). Wavefront aberrations in the human

eye have been noticed and studied as early as the time of Thomas Young (1801),

while some authors believe the earliest study even started in the 17th

century.

However, the first success in measuring the 2-dimentional ocular wavefront

aberrations was achieved by Smirnov in 1961 (Smirnov, 1961). He used a

modified Scheiner double pinhole, with one pinhole fixed and the other pinhole

moving across the pupil to subjectively map the ray orientations and then derive

the wavefront map. Although the process was labour intensive, he was able to

demonstrate that there were differences of aberrations between different eyes and

hence made the suggestion of using customized contact lenses to correct the

wavefront aberrations of the eye.

Wavefront sensing techniques can be categorized by whether the measurement is

based on a subjective or objective method. It is difficult to measure the wavefront

aberrations accurately using subjective methods due to the prolonged

measurement period and its dependence on the subject‟s judgement. The modern

wavefront sensors are mostly based on the objective method. During the past two

decades, a variety of designs of aberrometers became commercially available for

routine measurement of the eye‟s aberrations (Atchison, 2005). Among the

commercially available instruments, the Hartmann-Shack wavefront sensor is one

of the most widely adopted aberrometers to obtain the wavefront aberration map.

The Hartmann-Shack method was originally used in astronomy to measure

aberrations caused by turbulence in the earth‟s atmosphere to improve telescopes‟

performance (Platt & Shack, 1971). In 1994, Liang et al used this approach to

evaluate the wavefront aberrations in the eye (Liang et al, 1994). Since it offers

advantages in terms of accuracy, reliability and speed, the Hartmann-Shack

wavefront sensor has became the most popular measurement system to analyse

aberration structure of human eye for both research and clinical purposes (Thibos

& Hong, 1999; Cheng et al, 2003a; Lawless and Hodge, 2005).

38

Figure 2.7 Concept of an aberrometer based on the Scheiner-Hartmann-Shack

principle.

Liang‟s concept of the Scheiner-Hartmann-Shack aberrometer is shown in Figure

2.7. A narrow beam from the monochromatic light source (the Laser diode) was

collimated and delivered to the eye, which projects a light spot on the retina. Part

of the light is reflected back from the point source. Because the shape of an

aberrated wavefront surface changes as it propagates, the exit pupil of the eye is

imaged to the lenslet array of the CCD camera by a set of relay lenses. The

wavefront aberrations at the exit pupil of the eye are then measured.

39

Figure 2.8 Grid pattern of (a) the ideal wavefront, and of (b) an aberrated

wavefront.

As shown in Figure 2.7, the reflected wavefront passes through the micro lenslet

array and finally focuses on a CCD sensor. In a perfect eye, the reflected plane

wave will be focused into images with each point locating on the optical axis of

the corresponding lenslet (displayed as Figure 2.8a). Otherwise, the aberrated

wavefront shows a distorted grid pattern (as shown in Figure. 2.8b). It can be seen

that the local slope of the wavefront is different for each lenslet, and therefore the

wavefront will be focused into an irregular grid pattern. By measuring the

displacement of each point from its corresponding lenslet axis, the slope of the

aberrated wavefront when it entered the lenslet can be calculated. After

mathematical integration of the slope, the final aberration map will be obtained. A

40

detailed algorithm of calculating the aberration map from the wavefront slope is

described by Liang et al. (1994). The measured wavefront aberrations can be

described and analyzed with the earlier introduced Zernike polynomials

2.2.4 Monochromatic wavefront aberrations in normal human eyes

From both a fundamental and a clinical point of view, it is important to

understand the distribution of the wavefront aberrations in the population of

normal human eye, and to describe them effectively. Different groups have

performed studies on the monochromatic wavefront aberrations in populations of

normal human eyes (Porter et al., 2001; Castejón-Mochón et al., 2002; Thibos et

al., 2002; Wang and Koch, 2003a; Salmon and van de Pol, 2006). A summary of

each study is shown in Table 2.1.

Table 2.1 Studies of monochromatic wavefront aberrations in normal human eyes.

Investigators

(year)

Subjects

(No. of

eyes)

Age

(mean±std)

Refractive

error (D)

Tested

pupil

size

(mm)

Zernike

orders

HOA

RMS

(µm)

Porter et al

(2001)

109

(NA)

21~65

(41±11)

Sph: -12 ~

6

Cyl: -3 ~ 0

5.7 2nd

~5th

NA

Castejón-

Mochón

et al (2002)

59

(108)

20~30

(24)

NA 5.0 2nd

~5th

NA

Thibos et al

(2002)

100

(200)

22~35

(26±6)

Sph: -10 ~

5

Cyl: -1.75

~ 0

6.0 2nd

~7th

NA

Wang &

Koch (2003)

306

(532)

20~71

(41±10)

Sph:-

11.6~7.6

6.0 2nd

~7th

0.305

±0.095

Salmon &

van de Pol

(2006)

1433

(2560)

Pooled data Pooled

data

6.0 Pooled

data

0.33

±0.14

Porter et al (2001) investigated the distribution of monochromatic aberrations

from the 2nd

to the 5th

order across a 5.7 mm pupil in 109 normal subjects.

Castejón-Monchón and coauthors (2002) studied the monochromatic aberrations

from 108 young eyes across a 5 mm pupil. Thibos et al (2002) measured the

monochromatic aberration structure of 200 cyclopleged normal eyes. Wang and

41

Koch examined the ocular HOAs across a 6 mm pupil in 532 eyes and analyzed

the Zernike aberrations up to the 7th

radial order. An important study was later

performed by Salmon and van de Pol (2006), analyzing the pooled wavefront data

from 10 laboratories contained 2560 eyes of 1433 subjects.

There is some variation in the results between the studies (Table 2.1), which may

due to the differences of subject‟s age, refractive error, pupil size and

measurement technique. However, there are also common findings in these

studies including:

1) The second order wavefront aberrations account to the majority of the

total aberrations. Porter et al (2001) found that the second order

aberrations account for about 92% and 3rd

~5th

order aberrations account

for about 7% of the total aberrations, respectively. Castejón-Monchón et

al (2002) reported about 91% of the root-mean square (RMS) wavefront

error corresponds to the second order aberrations. In the study of Thibos

et al (2002), after correcting the subjects‟ defocus and astigmatism with

spectacle lenses, for most eyes the residual second-order wavefront

variance was still greater than the combined higher order wavefront

variance.

2) Correlations of wavefronts between left and right eyes were studied in all

five studies. Zernike coefficients of defocus ( 0

2C ), primary spherical

aberration ( 0

4C ) and horizontal astigmatism ( 2

2C ) showed the highest

correlations.

3) Most Zernike coefficients have mean values around zero, with large inter-

subject variability. One clear exception in HOAs is the spherical

aberration, which is systematically biased towards positive values for the

unaccommodated eye. Porter and coauthors (2001) reported a mean value

of spherical aberration of 0.138 ± 0.103 µm across a 5.7 mm pupil.

Salmon and van de Pol (2006) reported a mean value of 0.128 ± 0.096 µm

in a 6 mm pupil. A slightly lower mean value of 0.101 ± 0.103 µm (in a

6 mm pupil) was found by Wang and Koch (2003a).

42

2.2.5 Factors affecting wavefront aberrations in the human eye

The ocular aberrations vary due to a variety of factors. The effects of pupil size,

accommodation, age, refractive error, keratoconus, and corneal refractive

procedures will be discussed in this section.

Pupil size

The diameter of pupil can vary from about 2.0 mm under a high illumination

environment to about 8.0 mm in a dark environment (Reeves, 1920; Crawford,

1936). In a pupil size smaller than 2.0 mm, diffraction affects the image quality

more than aberrations (Atchison & Smith, 2000). A larger pupil will allow the

light rays to enter the eye through the periphery of cornea and crystalline lens

with larger incident angles compared to the paraxial rays, which may cause an

increase of wavefront aberrations. As the pupil size increases, the effect of

aberrations on image quality increases, and becomes more dominant in the larger

pupil.

Castejón-Mochón et al (2002) found the HOA RMS in 70 young eyes increased

significantly in larger pupils compared to the value in a smaller pupil. They

recorded average HOA RMS values of 0.02 µm, 0.14 µm and 0.40 µm, and these

values accounted for approximately 2.7%, 9.2% and 13.8% of the total wavefront

RMS in corresponding pupil diameters of 3.0 mm, 5.0 mm and 7.0 mm,

respectively. An increase in HOA with pupil size was also reported in the study

of Thibos et al (2002), who analysed the dependence of HOA RMS error on pupil

size for four pupil diameters of 3.0, 4.5, 6.0 and 7.5 mm. All Zernike wavefront

aberrations from the 2nd

to 6th

radial order increased with the pupil size. In the

study of Wang et al (2003) involving 51 myopic subjects, the authors found

significant increases of RMS values in Zernike aberrations through the 3rd

to 6th

radial order when the pupil diameter changed from 4 mm to 5 mm, and from

5 mm to 6 mm. A similar trend was also reported by Salmon and van de Pol

(2006) from their study on the pooled wavefront data from more than 2000 eyes.

Accommodation

Accommodation refers to the dynamic changes in optical power of the eye to

bring objects at different distances into focus. In an accommodated eye, the

43

crystalline lens changes its shape, position, and refractive index gradient (Brown,

1973; Garner & Smith, 1997; Dubbelman et al, 2003), which alters the eye‟s

optical structure and hence causes changes in the wavefront aberrations.

Accommodation-induced changes of aberrations including changes of defocus

(Ciuffreda, 1991; Garner & Yap, 1997), astigmatism (Millodot & Thibault, 1985;

Ukai & Ichihashi, 1991; Tsukamoto et al., 2000; Mutti, Enlow & Mitchell, 2001)

and HOAs (Koomen, Tousey & Scolnik, 1949; Ivanoff, 1956; Jenkins, 1963;

Howland & Buettner, 1989; Atchison et al., 1995; He, Burns & Marcos, 2000;

Ninomiya et al., 2002; Cheng et al., 2004; Buehren & Collins, 2006) have been

reported in different studies.

Among the HOA terms, a general trend of spherical aberration changing in the

direction to negative with increase in accommodation has been observed (Ivanoff,

1956; Jenkins, 1963; He, Burns & Marcos, 2000; Ninomiya et al., 2002; Cheng et

al., 2004; Buehren & Collins, 2006). Changes of other HOAs with

accommodation were believed to not be systemic by some researchers (He, Burns

& Marcos, 2000). However, a recent study by Ninomiya et al (2002) compared

the monochromatic wavefront aberrations of 33 eyes from 33 young adults

measured under the non-accommodative state and at a 3.0 D accommodative

level. They found significant changes of both 0

4C and 0

6C (p=0.02 and p=0.004, in

a 6 mm pupil) after accommodation. In the study of Cheng et al (2004), the

wavefront aberrations in a large young adult population for accommodative

stimuli up to 6.0 D were studied. The authors reported a significant negative shift

of 0

4Z as the accommodative level increased, while the 0

6Z also had a trend of

increase towards positive values at higher accommodative level. Roorda and

Glasser (2004) studied the wavefront aberrations of an isolated crystalline lens

with a laser ray trace scanning technique. In their experiment, the most noticeable

changes with accommodation were observed for 0

4Z , which became more negative,

and 0

6Z , which progressed from negative to positive.

Age

The normal aging process affects all ocular tissues and causes changes to both

neural and optical parameters of the human eye. Increases of wavefront

44

aberrations have been found in aged eyes by different studies (McLellan, Marcos

& Burns, 2001; Artal et al., 2002; Kuroda et al., 2002; Wang & Koch, 2003;

Amano et al., 2004; Applegate et al., 2007; Atchison & Markwell, 2008; Plainis

& Pallikaris, 2008). Artal et al (2002) reported an increase rate of around

0.011 µm/year in the RMS value of total ocular HOAs (5.9 mm pupil), while

Atchison and Markwell (2008) reported a much lower rate of 0.00093 µm/year in

a group of emmetropic eyes in a recent study (5 mm pupil). Among the HOAs,

coma and spherical aberration were found to increase with age in some studies

(McLellan et al., 2001; Artal et a., 2002; Applegate et al., 2007). These changes

in the ocular aberrations may be contributed by the age-related changes of two

major optical components, the cornea and crystalline lens.

It is found that the radius of curvature of cornea decreases with age, and the

asphericity also changes (Kiely, Smith & Carney, 1982, 1984; Hayashi, Hayashi

& Hayashi, 1995; Dubbelman, Sicam & Van der Heijde, 2006). Increases of

corneal aberrations with age have been studied by different groups (Oshika et al.,

1999; Guirao, Redondo & Artal, 2000; Artal et al., 2002; Wang et al., 2003;

Amano et al., 2004). Most studies showed great variation of corneal aberrations

between subjects, and found the corneal HOAs increase slightly with age.

However, this increase of corneal HOAs alone is not enough to explain the

substantial reduction of retinal image quality in aged eyes (Artal et al., 1993.)

Age-related changes in the crystalline lens are another factor affecting the eye‟s

optical performance. Tissue of the crystalline lens grows continuously throughout

life and produces a negative impact on the optical performance of the eye

(Scammon & Hesdorffer, 1937; Glasser & Campbell, 1999). The weight of

isolated lens increases at a uniform rate of 1.33 mg per year, which results in an

increase of approximately 150% in the mass over the life span (Glasser &

Campbell, 1999). In a cross-sectional study involving 100 subjects of different

ages, Brown (1974) reported a substantial decrease of the anterior lens surface

with the increase of age. The axial length thickness and equatorial diameter of the

lens also increases throughout the life span (Dubbelman & Van der Heijde, 2001;

Kasthurirangan et al., 2008). Kasthurirangan et al (2008) found an increase of

0.98 mm and 0.28 mm of the lens thickness and equatorial diameter, respectively,

in a group of aged eyes (mean age 64 years) compared to a younger group (mean

45

age 23 years). The gradient refractive index of the lens also changes with the age.

Dubbelman & Van der Heijde (2001) found a small, but significant decrease of

the equivalent refractive index of the lens with age. More recent studies (Jones,

Atchison & Pope, 2007; Kasthurirangan et al., 2008) indicated that the refractive

index of central plateau region remained unaffected, while the refractive index at

the periphery declined in older lenses. Furthermore, a mechanism of optical

balance, produced by the internal ocular surfaces, to partially compensate the

corneal aberrations, can be observed in most young eyes (Artal et al., 2001; Kelly,

Mihashi & Howland, 2004), but is not present in older subjects (Artal et al., 2002).

Refractive error

Conflicting results are found in literature of the impact of refractive errors on the

optical structure and higher order aberrations of the eye. There is some evidence

of changes in optical components with refractive errors (Lam et al, 1999).

Corneal radius was found to be significantly correlated with refractive error in

some studies, where myopes were found to have steeper corneas than emmetropes

(Carney, Mainstone & Henderson, 1997; Goss et al., 1997; Strang, Schmid &

Carney, 1998; Llorente et al., 2004a; Atchison, 2006), while hyperopes have

flatter corneas (Llorente et al., 2004a). However, the same results could not be

obtained by other studies (Mainstone et al., 1998; Horner et al., 2000). A study by

Atchison (2006) reported that the anterior corneal asphericity is not significantly

affected by myopia, but Horner et al (2000) reported a strong correlation between

change in shape of the peripheral cornea and myopia progression. Llorente et al

(2004a) also found more negatively aspheric corneas in myopes than in

hyperopes.

There are also conflicting findings on the relation of refractive errors and HOAs

in the human eye. Some authors reported no significant changes of HOAs with

myopia (Carkeet et al., 2002; Cheng et al., 2003b; Netto et al., 2005; Zadok et al.,

2005; Atchison, Schmid & Pritchard, 2006), while other researchers reported

moderate increase of HOAs in myopes (Marcos et al., 2000; He et al., 2002;

Paquin, Hamam & Simonet, 2002; Buehren, Collins & Carney, 2005). One study

by Llorente et al (2004a) showed greater HOAs in hyperopes than in myopes.

Cheng et al (2003b) found that astigmatic eyes tended to have larger total HOAs

46

than non-astigmatic eyes. In earlier studies adopting the Howland crossed-

cylinder aberroscope, Applegate (1991) found significant increase of coma and

spherical aberration in some myopic subjects and reported a mean increase of

aberrations in myopes, while Collins, Wildsoet & Atchison (1995) also found

large amount of aberrations in more than one third of their myopic subjects.

Theoretically, myopia caused by greater eye length should be accompanied by

increase of positive spherical aberration (Cheng et al, 2003b; Atchison et al.,

2004; Atchison & Charman, 2005). However some studies have demonstrated

decreases of spherical aberration in low myopia (Collins, Wildsoet & Atchison,

1995; Carkeet et al., 2002), or no significant increase of spherical aberration with

myopia (Porter et al, 2001; Cheng et al., 2003b). The study by He et al (2002)

reported slightly but significantly greater RMS values of aberrations through the

2nd

to 7th

Zernike radial orders in myopic adults compared with emmetropic

adults.

Keratoconus

Keratoconus is a progressive non-inflammatory corneal disorder, which affects

the shape, structure and transparency of the cornea and causes significant visual

problems. The estimated prevalence of keratoconus in the general population is

about 50-230/100,000 (Rabinowitz, 1998). It is currently the major indication for

cornea transplantation in developed countries (Lois et al., 1997; Liu & Slomovic,

1997).

Significant amounts of corneal and ocular HOAs are induced by the distortion of

cornea in keratoconus compared to normal eyes (Maeda et al., 2002; Gobbe &

Guillon, 2005; Alió & Shabayek, 2006; Lim et al., 2007; Schlegel et al., 2009).

Gobbe and Guillon (2005) studied the corneal HOAs in a group of keratoconics

and found they had a mean HOA RMS approximately 10 times that of the control

group. Schlegel et al (2009) reported a 6.3 times larger mean RMS of total

corneal HOAs in keratoconus than in normal eyes. Total coma, trefoil and

spherical aberration were also found to be 10 times, 5 times and 2.5 times larger

in the keratoconic subjects. Maeda et al (2002) compared the ocular aberrations in

35 keratoconic eyes and 38 normal eyes using a Hartmann-Shack wavefront

sensor. The authors reported that the keratoconic group had mean RMS of coma-

47

like aberrations and forth-order aberrations approximately 9.4 and 4.6 times of

those found in control group. Lim and co-authors (2007) also found a similar

trend in their study, reporting significantly larger ocular HOAs in total HOA

RMS and 3rd

order RMS than normal eyes. The vertical coma ( 1

3

Z ), followed by

trefoils ( 3

3

Z and 3

3Z ), and spherical aberration ( 0

4Z ) were found to be the most

dominant HOAs in both corneal and ocular aberrations in keratoconic eyes.

Corneal refractive procedures

The cornea is the major refractive component in the human eye. It contains

approximately two thirds of the unaccommodated eye‟s optical power (Carney,

Mainstone & Henderson, 1997; Artal & Guirao, 1998; Courville, Smolek &

Klyce, 2003). In the ocular system, it is the outer-most surface and acts as a

convex lens bending and refracting the light that passes through the cornea. Any

changes in the shape of the corneal surfaces will alter the corneal aberrations and

therefore affect the ocular aberrations. Nowadays, some patients choose vision

corrections by means of corneal refractive procedures to reduce their dependence

on spectacles and contact lenses. These procedures may induce additional higher

order aberrations to the eye while correcting the conventional refractive errors

and degrade the patient‟s visual acuity and retinal image quality (Marcos, 2001;

Mrochen et al., 2001; Moreno-Barriuso et al., 2001; Joslin et al., 2003; Ninomiya

et al., 2003; Wang & Koch, 2003; Berntsen, Barr & Mitchell, 2005; McCormick

et al., 2005; Pesudovs, 2005; Hiraoka et al., 2005, 2007; Subbaram et al., 2006;

Benito, Redondo & Artal, 2009; Padmanabhan et al., 2009).

I) Orthokeratology

Orthokeratology is a method of temporarily reshaping the corneal surface to

change the refraction in myopic patients by programmed application of rigid gas

permeable (RGP) contact lenses. The central cornea is flattened and thinned

during the lens wearing, resulting in a reduction of myopia and an improvement

of unaided vision (Nichols et al., 2000; Swarbrick, 2006). After wearing of the

RGP lens is ceased, the cornea can gradually return to the original shape

(Mountford, 1997, 1998).

48

Current methods of orthokeratology can help to eliminate low to moderate

myopia. However the changes in the central corneal curvature induce significant

amount of HOAs, particularly spherical aberration (Joslin et al., 2003; Berntsen,

Barr & Mitchell, 2005; Hiraoka et al., 2005, 2007). Joslin et al (2003) studied the

changes of HOAs (through the 3rd

to 6th

order) in 18 eyes after one month of

orthokeratology. The authors found significant increases of the total HOAs in

both studied pupil sizes of 3.0 mm (a factor of 2.66) and 6.0 mm (a factor of 2.50).

Among all the HOAs, the coefficient of primary spherical aberration ( 0

4C ) was

affected the most by orthokeratology, increasing from 0.084±0.16 to

0.39±0.16 µm in a 6.0 mm pupil. Similar results were observed by Berntsen and

coauthors (2005) in a group of subjects one month after treatment. Berntsen, Barr

and Mitchell (2005) observed an increase of almost five times for primary

spherical aberration in a 5.0 mm pupil. Hiraoka et al (2005) reported significant

increases of the third and fourth order wavefront RMS in 64 eyes with overnight

orthokeratology for myopia. They found approximately two and three fold

increases of the fourth order RMS in 3.0 mm pupil and 6.0 mm pupil,

respectively. Significant changes were also observed for vertical coma, which

changed from positive to negative, and for horizontal coma, which greatly

increased in the positive direction. Strong correlation was found between the

increase of HOAs and myopia correction.

The induction of HOAs by orthokeratology, in even the clinically successful

cases, may cause an overall reduction of contrast sensitivity function (Hiraoka et

al., 2007) and losses in low contrast best corrected visual acuity (Berntsen, Barr

& Mitchell, 2005).

II) Laser refractive surgery

Laser refractive surgery is one of the most technologically advanced methods

available today to reduce the dependence on spectacles and contact lenses

(Brunette, Gresset & Boivin, 2000; Pesudovs, Garamendi & Elliott, 2006).

During the procedures (phororefractive keratectomy (PRK) or Laser in situ

keratomileusis (LASIK)), the front corneal surface is reshaped by a photoablation

effect produced by an excimer laser to correct the refractive error (Li & Zhu,

2001).

49

Many studies have found significant increases of HOAs in patients who have

undergone laser refractive surgeries (Marcos, 2001; Mrochen et al., 2001;

Moreno-Barriuso et al., 2001; Ninomiya et al., 2003; Wang & Koch, 2003;

McCormick et al., 2005; Pesudovs, 2005; Subbaram et al., 2006; Benito,

Redondo & Artal, 2009; Padmanabhan et al., 2009). For patients who have

undergone conventional myopic correction, root mean square (RMS) values of

both total higher order aberrations (HOAs) and spherical aberration were found to

be dramatically increased. Marcos (2001) and Moreno-Barriuso et al (2001)

studied the post-operative aberrations in a group of subjects across a 6.5 mm

pupil using laser ray tracing technology. They reported a 1.9 times increase of

total higher order aberrations RMS and approximately 3.7 times increase in

spherical aberration. Ninomaya et al (2003) reported 2 and 3 times increase of

total HOAs RMS in subjects who have undergone laser myopic correction in

pupil diameters of 4 mm and 6 mm, respectively. Positive spherical aberration is

typically induced after corneal reshaping for myopia correction and there is a

strong positive correlation between the induced spherical aberration and the

amount of myopia corrected, as found in both clinical results (Hong & Thibos,

1999; Seiler et al., 2000; Moreno-Barriuso et al, 2001; Hersh, Fry & Blaker, 2003)

and theoretical studies (Hersh, Fry & Blaker, 2003; Yoon et al., 2005).

Significant increases of RMS values of total HOAs were also reported by studies

on outcomes of LASIK correction for hyperopia (Wang and Koch, 2003; Ma et

al., 2004; Llorente et al., 2004b; Benito, Redondo & Artal, 2009). Llorente et al

(2004) reported a 2.2 times increase in RMS of total HOAs for 13 eyes after

receiving standard LASIK presbyopic treatment. Benito, Redondo & Artal (2009)

observed an average 2.3 times higher induction of HOAs in 6 subjects who have

undergone laser correction for hyperopia across a 6 mm pupil. Smaller but still

significant increases of ocular HOAs were found in studies of Wang and Koch

(2003), and Ma et al (2004). However, spherical aberration was found to be

significantly reduced after laser hyperopic correction in all four studies.

The technology of customized LASIK correction adopting scanning spot laser

and wavefront based ablation profile was reported to reduce the post-operative

induced HOAs in 33% to 47% of the treated eyes (Krueger et al., 2001; Mrochen,

Kaemmer & Seiler, 2001). However, an average increase of 0.12 ±0.18 µm in

50

post-operative HOAs RMS was still found by Subbaram et al (2005) in 330

myopic eyes treated by the customized ablation, possibly due to the effects of

decentration and wound healing after surgery.

The increase of HOAs after corneal refractive surgeries can cause losses in low

contrast visual acuity (Marcos, 2001). In some cases of moderate to high myopic

correction, the irregularity of post-operative corneas may produce optical side

effects such as glare, halo, and monocular diplopia, which bring risks to the

patient for night driving (Hersh et al., 2000; Pop & Payette, 2004).

2.2.6 Wavefront aberrations, retinal image quality, and retinal image

quality metrics (IQM)

In this section, the effect of higher order aberrations (HOAs) on retinal image

quality and image quality metrics will be reviewed.

It is well known that the human eye suffers from high order aberrations besides

defocus and astigmatism (Smirnov, 1962; Howland & Howland, 1977; Liang et

al., 1994). Except when the pupil size is very small (e.g., in a 2.0 mm pupil), the

HOAs show a deleterious effect on the retinal image quality. It is important to

quantify the effects of different wavefront aberrations on retinal image quality.

The retinal image quality can be estimated from aberrations by double pass

techniques (Artal 1990). The commonly used criteria for analysis of image

quality in an optical system include the point spread function (PSF) and optical

transfer function (OTF).

Point spread function (PSF)

The image of a point object through an optical system is called a point spread

function. A perfect optical system images a point source into a compact, high-

contrast retinal image, while an aberrated system shows a less compact and lower

contrast image, as shown in Figure 2.9.

51

Figure 2.9 (a) PSF of a diffraction limited eye, and (b) PSF of an aberrated eye,

both in a 6 mm pupil.

The PSF is a necessary component for retinal image reconstruction, which can be

calculated from the pupil function yxP , , defined as

yxikWyxAyxP ,exp,, (2-8)

where k is the wave number (k =2π/λ) and ),( yxA is the amplitude transmittance

at the point ),( yx . In a larger pupil, the apodization effect of the Stiles-Crawford

can be induced (Stiles & Crawford, 1933). ),( yxW is the wavefront aberration.

The PSF can be estimated by:

2

''''2exp',', dydxyyxxiyxPCyxPSF (2-9)

where C is a normalisation factor that depends on the optics of the system, the

wavelength and the radiation flux entering the pupil. The integral in equation (2-9)

is essentially the magnitude square of a two-dimensional Fourier transformation

of the pupil function with respect of x’ and y’. By using the PSF result, we can

calculate the retinal image ),( yxg of an object ),( 00 yxf by

yxPSFyxfyxg ,,, 00 (2-10)

in which “ ” denotes the convolution operation.

52

The effects of individual terms of Zernike polynomials from the 2rd

to 6th

radial

order to the retinal image are simulated for a 6.0 mm pupil with a common

wavefront RMS value of 0.3 µm. The results are shown in Figure 2.10.

Figure 2.10 Effect on retinal image of different Zernike terms (RMS is 0.3 µm in

a 6 mm pupil).

The optical transfer function (OTF)

The optical transfer function (OTF) describes the spatial variation of the image as

a function of spatial frequency. It is a complex function that includes both the

modulation transfer function (MTF) and the phase transfer function (PTF) as

follows:

yxyxyx ffPTFffMTFffOTF ,,, (2-11)

where

yxyx ffOTFffMTF ,,

yxyx ffiffPTF ,2exp,

53

where λ is the wavelength and yx ff , are the spatial frequency components in the

x and y plane, respectively. The MTF describes the response of an optical system

to an image decomposed into sinusoidal gratings. It can be defined as the

amplitude of the image divided by the amplitude of the object. The PTF describes

the phase shift across a range of spatial frequencies. One can obtain the two-

dimensional OTF from the Fourier transform of the PSF. An alternative way is to

calculate the OTF by a convolution of the pupil function yxP , with its complex

conjugate:

dxdyYyXxPyxPYXOTF C ,,, (2-12)

“ ”denotes the complex conjugate, C is the common region of pupil for the

integration.

Retinal image quality metrics (IQMs)

A metric of the optical quality for the human eye should correlate with the visual

performance and accurately describe the eye‟s performance when affected by

different optical factors. Some optical quality metrics, such as RMS wavefront

error and Strehl ratio, have been used as standard industrial methods to evaluate

the optical quality of man-made optical systems (Marsack, Thibos & Applegate,

2004). However, the human eye is often more aberrated than man-made optical

components, and the industrial metrics may not be efficient and accurate enough

to predict the visual quality or optical limits of the eye. Marsack, Thibos and

Applegate (2004) evaluated the performances of a variety of metrics to describe

the optical quality of the eye. Some of the metrics are pupil plane based,

describing the optical wavefront quality at the exit pupil plane, while others

quantify the quality of retinal image.

The visual Strehl ratio based on the optical transfer function (VSOTF) was found

to be one of the metrics highly correlated with the visual performance (Marsack,

Thibos & Applegate, 2004; Thibos et al., 2004). The VSOTF is defined as:

54

yxyxDLyxN

yxyxyxN

dfdfffOTFffCSF

dfdfffOTFffCSF

VSOTF

,),(

,,

(2-13)

where yxDL ffOTF , denotes the diffraction limited optical transfer function,

and ),( yxN ffCSF is the neural contrast sensitivity function (Campbell and Green,

1965).

Several studies also found that the area under the MTF between 5 to 15 cpd

(Legras et al., 2004) or 5 to 25 cpd (Mouroulis & Zhang, 1992) to be well

correlated with subjective vision. However, these studies have used relatively

limited numbers of subjects.

The IQMs derived directly from wavefront aberrations provide links from the

aberrations to retinal image quality. In recent years, some research groups have

developed methods to theoretically estimate the DOF of the eye from wavefront

aberrations using various IQMs (Legge et al., 1987; Jansonius & Kooijman, 1998;

Marcos, Moreno & Navarro, 1999). In such methods, DOF is defined as the range

of defocus error that degrades the retinal image quality calculated from the IQMs

to a certain level of the possible maximum value. However, the main problem

with those methods is the application of an arbitrary threshold level that may not

be suitable for all eyes.

2.3 Summary of literature review and design of studies

With the substantial increase in the number of presbyopic patients, the

development of optimized corrections for presbyopia has become an important

research issue. The methods currently available for presbyopic correction include

different designs of spectacles, contact lenses and IOLs. However, they all come

with different limitations, such as limited depth of focus, increased eye and head

movements, some adaptation required and the potential to impair functional

vision (e.g. risk of falls and driving).

55

One method for treating presbyopia is to extend the DOF of the human eye. A

larger DOF is particularly important for presbyopic subjects, which will allow

them to obtain acceptable retinal image quality when viewing an object moving

through a range of near to intermediate distances. It is known that the DOF of the

human eye can be affected by HOAs. Inducing controlled amounts of primary

spherical aberration 0

4Z has been used as a method to help presbyopic patients to

improve their near vision through expanded DOF with corrections including

multifocal contact lenses and intraocular lenses. However, little is known about

the effect of other HOA terms on the DOF. The aim of this research study is to

investigate the interaction between the DOF and the wavefront aberrations of the

eye, with a view to using wavefront aberrations to expand the DOF. To achieve

the aims of this research, the following objectives need to be accomplished:

1. Estimation of the relationship between higher order aberrations (HOAs) and

depth of focus (DOF) in the eye and estimation of some candidate wavefront

aberrations to extend the DOF.

2. Design and construction of an adaptive optics (AO) system.

3. Apply the pre-determined aberrations to the eye with the aid of the developed

AO system and evaluate their efficiency to extend the DOF.

Five studies have been designed to fulfil the objectives. The relationship between

each objective and the studies are shown in Figure 2.11.

56

Figure 2.11 Objectives and designed studies.

Objective 1 covers the first three studies in this research. In Study 1 (described in

Chapter 3), the predicted DOF of four different clinical groups, including young

emmetropes, young myopes, presbyopes and keratoconics, will be modelled,

which allows the estimation of the relationship between different levels of HOA

RMS and the predicted DOF. In Study 2 (described in Chapter 4), a method is

developed to estimate the DOF from wavefront measurements using retinal image

quality metrics (IQMs) with an optimal threshold level, which would correlate

with the subjectively measured DOF. In Study 3 (described in Chapter 5), the

subjective DOF of a group of keratoconic subjects is measured and compared to

the subjective DOF in a group of normal eyes. Since keratoconus results in

significant increases in the level of HOA of the eye, including spherical

57

aberration, coma and trefoil, this population of subjects provides an opportunity

to study the influence of these HOA on DOF.

Study 4 (described in Chapter 6) is designed for Objective 2. It presents the

details of the design and construction of an AO system and the evaluation of the

system‟s performance.

In Study 5 (described in Chapter 7), the optimal combinations of primary and

secondary spherical aberrations ( 0

4Z and 0

6Z ) are estimated and applied to the eye

with the aid of the AO system, and their efficiency to expand the DOF is

evaluated.

58

Chapter 3. Modelling the depth of focus in different

clinical groups

3.1 Introduction

The traditional goal of vision correction is to provide an optimal level of foveal

acuity and contrast sensitivity. For young eyes with active accommodation,

achieving a high level of vision performance for far vision allows similar levels

of performance to be achieved at a range of distances from far to near. The visual

acuity of young eyes shows a slight improvement at intermediate distances that is

thought to be related to accommodation accuracy (McBrien and Millodot, 1986;

Rosenfield and Gilmartin, 1988; Ramsdale and Charman, 1989) or to the natural

variations in higher order aberrations with accommodation ( Buehren and Collins,

2006). However for presbyopes, the optimal correction of far vision will

obviously be inadequate at near distances. This problem can be partly

compensated by the depth of focus of the eye, but is normally solved by

supplementary near vision correction.

It has been reported that the DOF of the human eye is influenced by refractive

error, with myopes and hyperopes showing greater DOF than emmetropes

(Gwiazda et al., 1993; Rosenfield and Abraham-Cohen, 1999; Collins, Buehren &

Iskander, 2006; Vasudevan, Ciuffreda & Wang, 2006). This could be due to

higher levels of higher order aberrations in myopes ( He et al., 2002; Buehren,

Collins & Carney, 2005) or a difference in sensitivity to blur in myopes (Thorn et

al., 1998; Rosenfield and Abraham-Cohen, 1999; Radhakrishnan et al, 2004a,

2004b).

The DOF of human eye is also known to increase with age, with presbyopes

shown to have higher DOF than young subjects (Nio et al., 2000). These

differences are thought to arise from pupil constriction and increased levels of

HOA associated with increased age (McLellan et al., 2001). Some forms of

optical correction of presbyopes deliberately attempt to increase the depth of

focus by introducing higher order aberrations, such as spherical aberration, to the

retinal image. So-called “simultaneous vision” bifocal contact lenses produce

59

variations in power across the entrance pupil or optical zone of the lens, to create

an increased DOF (Plakitsi and Charman, 1995). Some forms of intraocular

lenses also introduce to the eye HOAs such as spherical aberration, to increase the

DOF of the eye (Mierdel et al., 1999; Nio et al., 2003; Marcos et al., 2005;

Franchini, 2007).

Corneal reshaping procedures for myopia correction, such as RK, PRK, LASIK

and orthokeratology also alter the HOAs of the cornea and total eye. Studies of

the ocular aberrations (Hong and Thibos, 1999; Seiler et al., 2000; Moreno-

Barriuso et al., 2001; Marcos et al., 2001; Hersh et al., 2003; Kohnen et al., 2005)

and theoretical simulation of the surgical outcome (Yoon et al., 2005) have shown

that positive spherical aberration is typically induced after corneal reshaping for

myopia correction and that there is a correlation between the induced spherical

aberration and the amount of myopia corrected.

Although the DOF in different refractive groups including emmetropes, myopes,

and hyperopes, have been measured by other researchers in small populations

either subjectively or objectively (Gwiazda et al., 1993; Rosenfield and Abraham-

Cohen, 1999; Collins, Buehren & Iskander, 2006; Vasudevan, Ciuffreda & Wang,

2006), there has not been a study using the IQM based method to theoretically

model and compare the DOF in a large population. The aim of the study

described in this chapter was to investigate the predicted DOF in the eyes of

various clinical populations including young emmetropes, young myopes,

presbyopes, and keratoconics. A novel computer algorithm was developed to

estimate the predicted depth of focus (DOF) as a function of defocus and

longitudinal spherical aberration (LSA) from the measurement of wavefront

aberrations. Simulations were also conducted to study the effect of altering the

eyes‟ spherical aberration on the DOF. This study focused on two clinical groups,

the myopes and presbyopes, who could have significantly higher amounts of

spherical aberration induced following refractive correction. This was undertaken

using the data from the presbyopic group to estimate the effects of simultaneous

vision bifocal contact lenses and intraocular lenses, and also with the data from

the young myopic group, to simulate the effect of corneal reshaping.

60

3.2 Methods and subjects

3.2.1 Subjects

Wavefront data from four clinical groups were used, including young myopes,

young emmetropes, presbyopes and keratoconics. The emmetropic group data

was collected from the right eye of 20 young subjects (19 to 28 years of age) with

mean spherical equivalent of 0.00 D (range +0.25 to 0.25 D). The mean

cylindrical refraction was 0.03 D (ranging from 0.00 D to 0.50 D). The myopic

group data was collected from the right eye of 19 myopes (19 to 24 years of age)

with mean spherical equivalent of 3.84 D, range from 1.00 D to 7.50 D. The

mean cylindrical refraction was 0.53 D (ranging from 0.00 D to 2.00 D). The

presbyopic group data came from the right eye of 32 subjects with a mean age of

52 years (range from 45 to 55 years). The mean spherical equivalent was 2.50 D

(range from +1.25 D to 8.00 D). The mean cylindrical refraction was 0.50 D,

ranging from 0.10 D to 1.02 D. The fourth group consisted of wavefront data

from one eye of 35 subjects diagnosed with keratoconus. This diagnosis was

based on the presence of significant asymmetry in the corneal topography map

and an axial power of at least 50 D at the cone apex. The keratoconic subjects had

a mean age of 36 years (range from 20 to 49 years) with mean spherical

equivalent of 2.72 D (range +1.50 D to 12.60 D). The mean cylindrical

refraction was 2.77 D, ranging from -0.50 D to 7.50 D.

3.2.2 Wavefront aberrations

Wavefront aberrations of all subjects were measured with a Complete Ophthalmic

Analysis System (COASTM

, WaveFront Sciences, Inc.). For each subject, a series

of 430 dynamic wavefront measurements were acquired at the sampling

frequency of about 10 Hz (Zhu et al., 2004). The wavefront measurements were

fit with a series of Zernike polynomials up to and including the 8th radial order

for 3.5 mm and 5 mm entrance pupil diameters, to simulate vision performance

under photopic and mesopic conditions, respectively. The average wavefront

aberration was then calculated for each of the subjects and used to calculate the

optical properties of the given eye at the wavelength of 555 nm. Analysis of the

61

wavefront aberrations was conducted up to the 6th radial order using two radial

orders lower than the original wavefront fit (Neal et al., 2005).

3.2.3 Depth of focus

The DOF was estimated by calculating the range of defocus errors which

degraded the retinal image quality to a certain level of the possible maximum

value. This definition has been adopted earlier by Marcos et al. (1999) who

choose an 80 percent threshold, while a 50 percent threshold was used by Legge

et al. (1987) and Jansonius and Kooijman (1998).

Four metrics of retinal image quality were used. The first three metrics were

based on the estimated azimuthally-averaged modulation transfer

function )(

MTF , at spatial frequencies of 5 , 10, and 15 cycles per degree

(cpd), as shown in Figure 3.1, simulating the subjects‟ visual performance at low,

medium and high spatial frequency, respectively. The fourth metric, the visual

Strehl ratio (VSOTF), was based on the calculated optical transfer function across

all spatial frequencies up to 60 cpd (Iskander, 2006).

Figure 3.1 An example of the estimated modulation transfer function.

Azimuthally-averaged data at 5, 10 and 15 cpd are used as the first three image

quality metrics.

62

To study the quantitative influence of the longitudinal spherical aberration (LSA)

on the DOF of subjects from different clinical groups, a dedicated simulation

program was designed from first principles in Matlab (The MathWorks, Inc.,

Natick, MA). The simulation program was used to predict the DOF of subjects

with presence of original higher order aberrations (HOA) and also the DOF

affected by different levels of LSA. The flow chart of the computer simulation

program is shown in Figure 3.2.

Figure 3.2 Flowchart of the computer simulation. (a) Algorithm for calculating

the DOF with originally present amount of LSA. (b) Algorithm for calculating the

DOF as a function of LSA.

63

3.2.4 Predicting DOF of subjects with the presence of original LSA

In the first step, COASTM

data of a total wavefront aberration, consisted of a set

of Zernike coefficients up to and including the 8th radial order, are imported.

Because all the wavefront data were acquired at natural pupil sizes that were

larger than 5 mm in diameter, for consistency, in step 2, the original Zernike

coefficients are resampled to a specific pupil diameter of either 5 mm or 3.5 mm

using the method of Schwiegerling (2002).

Because only the effect of HOA on DOF is considered in this study, the estimates

of sphero-cylinder need to be first removed from the wavefronts. One can achieve

that by simply setting the first six Zernike coefficients to zero. However, it has

been shown that the Maloney‟s best sphero-cylinder (S/C) calculated in the

refractive power domain has the best correlation to the subjective sphero-

cylindrical refractive error of the eye (Iskander et al., 2007). Hence, a

transformation from the wavefront domain to the refractive power domain is

performed. In step 3, the refractive power distribution across the pupil, ),( rF , is

calculated from the resampled wavefront ),( rW using the method of the

refractive Zernike power polynomials (Iskander et al., 2007).

),(),( rWrF ,

where Z denotes the wavefront to refractive power transformation.

Following that, in step 4, the best S/C is estimated using the method of Maloney

et al. (1993) and subtracted from the previously obtained refractive power. This

leads to the new refractive power, given by

SCZerout FFF ,

whereZerF and

SCF is the refractive power calculated from the subject‟s original

wavefront and the estimated best S/C, respectively. To simulate through-focus, in

the through-focus loop, a desired level of defocus is added to the refractive power

from step 4. The levels of this additional defocus range from 3 D to +3 D in

0.125 D steps. In step 5, an inverse transformation from the refractive power

domain to the wavefront domain is performed (Iskander, Davis & Collins, 2007)

64

),(),( 1 rFrW outout

,

which is then used, in step 6, to calculate the four considered image quality

metrics.

From the wavefront ),( rWout with a new defocus value, the corresponding point

spread function and the optical transfer function (OTF) is calculated using fast

Fourier transforms (Iskander et al., 2001). Then, the 3D modulation transfer

function (MTF) is estimated by taking the amplitude of the OTF. Three image

quality metrics (IQM) based on the estimated azimuthally-averaged modulation

transfer function )(

MTF , at spatial frequencies of 5 , 10, and 15 cpd, and

the fourth IQM based on the optical transfer function (VSOTF) are also obtained

in step 6. At this point, the depth of focus of the subject with the original HOA

can be estimated by finding the range of focus which decreases the value of an

IQM to not less than 80/50 percent of their peak value.

3.2.5 Estimating the effect of varying the longitudinal spherical aberration

on DOF

Changes were made in the simulation program to estimate the effect of different

levels of LSA on DOF, as shown in Figure 3.2(b) with dashed lines and boxes.

After the wavefront to refractive power domain transformation, in step 4, the

original amount of longitudinal spherical aberration is calculated and removed.

The LSA is estimated as the difference between the average refractive power at

the periphery and that at the centre of the pupil, given by

2

0

2

0

max ),0(),( dFdrFLSA

where maxr indicates the max pupil radius. In the procedure, the limit of 0 is set

to 001.0min r mm. An additional loop is introduced to alter the level of LSA to

the refractive power from step 3. The levels of this additional LSA, which

corresponds to the primary Seidel spherical aberration, range from 5 D to +5 D

in 0.125 D steps. This leads to a new refractive power, given by

SCnewLSAorgLSAZerout FFFFF __

65

whereZerF , orgLSAF _ , newLSAF _ , and

SCF are the refractive power components

contributed from the subject‟s original wavefront given in terms of Zernike

polynomial coefficients, estimated amount of the original LSA, introduced

amount of LSA, and the estimated best S/C, respectively.

An example of the outcome of the double loop simulation program is shown in

Figure 3.3 for an emmetropic subject CW. The through-focus )10(

MTF at

different levels of LSA (shown in Figure 3.3a) was used to construct a 3D

representation of the DOF(LSA) estimator (Figure 3.3b). Three curves are drawn

on the top-view map (displayed in Figure 3.3c) of the 3D DOF(LSA) estimator.

Figure 3.3 DOF(LSA) estimate for subject CW. (a) through-focus )10(

MTF at

different levels of LSA. (b) 3D result of the DOF(LSA) estimator. (c) top-view

map of (b).

The “O” curve in the centre corresponds to the maximum value of through focus

)10(

MTF at different LSA levels, while the other two curves indicated by “Δ”

66

mark the boundaries corresponding to the threshold level of the maximum value

(in this case 80% is used). The distance between the two “Δ” curves clearly

indicate the change of DOF under influence of different levels of LSA.

3.3 Results

3.3.1 HOA comparison between groups

The group mean value of HOA RMS up to and including the 6th radial order for

four considered clinical groups are shown in Figure 3.4 for 3.5 mm and 5 mm

pupil diameters. As described in the methods section, the estimated best sphero-

cylinder was subtracted from each subject‟s original refractive power map before

calculating the DOF. In such a case, only the structure of the HOAs and the

interaction between different wavefront terms could affect the estimated DOF.

Figure 3.4 Higher order aberration (HOA) RMS values of the four groups,

consisting of young emmetropes, young myopes, presbyopes and keratoconics for

5 mm and 3.5 mm pupil diameters.

In the 5 mm pupil diameter, the total HOA RMS values in young emmetropic

eyes were significantly smaller than those in the other groups (t-test p < 0.05). No

significant difference was found in the HOA RMS between the myopic eyes and

67

presbyopic eyes. The HOA RMS of the keratoconics group was much higher than

the other three groups (all p < 0.001). Similar results were observed when the

pupil was limited to a 3.5 mm in diameter.

3.3.2 Peak value of each image quality parameter for the four population

groups

Due to the different amount of HOA and wavefront structure in the individual

subjects‟ eyes, the achievable peak value calculated by each image quality

parameter for the four clinical groups varies. As shown in Table 3.1, the

emmetropic group has the highest group mean peak values calculated by all four

IQMs. The myopic subjects show slightly higher mean peak values than the

presbyopic subjects. While the keratoconics group has the lowest peak values in

the four considered groups.

68

Table 3.1 Group mean of peak values of each IQM predicted from the original wavefront aberrations of the subjects.

Refractive Group

Peak value from four IQMs (Mean ± SD)

5 mm pupil 3.5 mm pupil

IQMs IQMs

)5(

MTF )10(

MTF )15(

MTF VSOTF )5(

MTF )10(

MTF )15(

MTF VSOTF

Emmetropic (20)

0.89±0.06 0.74± 0.12 0.62± 0.15 0.56± 0.19 0.93±0.02 0.84± 0.06 0.74± 0.10 0.81± 0.14

Myopic (19)

0.86±0.08 0.68± 0.12 0.55± 0.13 0.46± 0.15 0.91±0.04 0.79±0.09 0.68±0.11 0.73±0.15

Presbyopic (32)

0.83±0.16 0.62± 0.11 0.47± 0.12 0.39± 0.12 0.88±0.04 0.75±0.10 0.62±0.12 0.66±0.16

Keratoconic (35)

0.43±0.22 0.24± 0.16 0.17± 0.11 0.12± 0.09 0.57±0.21 0.36±0.20 0.26±0.16 0.24±0.17

69

Table 3.2 Group mean of predicted DOF of the subjects (80% threshold) using a range of image quality metrics (IQMs).

Refractive Group

DOF (Mean ± SD) in Dioptres (80% threshold)

5 mm pupil 3.5 mm pupil

IQMs IQMs

)5(

MTF )10(

MTF )15(

MTF VSOTF )5(

MTF )10(

MTF )15(

MTF VSOTF

Emmetropic (20)

0.75±0.04 0.46± 0.08 0.37± 0.11 0.32± 0.11 0.93±0.01 0.50±0.02 0.36±0.04 0.30±0.04

Myopic (19)

0.79±0.08 0.47± 0.07 0.38± 0.08 0.37± 0.10 0.95±0.03 0.54±0.07 0.41±0.07 0.33±0.05

Presbyopic (32)

0.80±0.07 0.58± 0.24 0.43± 0.13 0.45± 0.16 0.95±0.02 0.55±0.06 0.43±0.09 0.37±0.09

Keratoconic (35)

1.42±0.63 1.27± 0.83 1.01± 0.63 1.30± 0.87 1.48±0.62 1.03±0.43 0.98±0.58 1.06±0.83

Table 3.3 Group mean of predicted DOF of the subjects (50% threshold) using a range of image quality metrics (IQMs).

Refractive Group

DOF (Mean ± SD) in Dioptres (50% threshold)

5 mm pupil 3.5 mm pupil

IQMs IQMs

)5(

MTF )10(

MTF )15(

MTF VSOTF )5(

MTF )10(

MTF )15(

MTF VSOTF

Emmetropic (20)

1.30±0.09 0.81± 0.15 0.68± 0.21 0.65± 0.20 1.59±0.03 0.87±0.06 0.65±0.08 0.57±0.08

Myopic (19)

1.39±0.16 0.86± 0.15 0.71± 0.42 0.74± 0.19 1.63±0.08 0.94±0.13 0.73±0.13 0.65±0.14

Presbyopic (32)

1.44±0.16 1.01± 0.36 0.89± 0.13 0.93± 0.35 1.64±0.06 0.99±0.16 0.84±0.26 0.74±0.19

Keratoconic (35)

3.13±1.36 3.00± 1.67 2.85± 1.49 3.08± 1.61 2.79±1.12 2.51±1.35 2.39±1.38 2.34±1.33

70

3.3.3 Comparison of predicted DOF between groups

The group means of the predicted DOF values for the four considered groups

derived from different image quality metrics with an 80 percent threshold are

presented in Table 3.2.

Emmetropes showed the smallest value of averaged DOF ranging from 0.32 to

0.75 D and from 0.30 to 0.93 D for a 5 mm and a 3.5 mm pupil diameter,

respectively. On the other hand, keratoconics showed highest averaged DOF,

ranging from 1.11 to 1.44 D and from 1.06 to 1.53 D for a 5 mm and a 3.5 mm

pupil diameter, respectively.

For a 5 mm pupil diameter, Student‟s t-test revealed differences in the predicted

DOF at low (5 cpd) spatial frequencies between the young emmetropes and

myopes (p = 0.01, 0.24, 0.38, and 0.08 for the DOF derived from )5(

MTF ,

)10(

MTF , )15(

MTF , and VSOTF, respectively). Significant differences were

also observed in the predicted DOF between the young emmetropic and the

presbyopic group (all p ≤ 0.05). However, significant differences in the predicted

DOF between young myopes and presbyopes were only found at mid spatial

frequency with )10(

MTF , (p= 0.01) and with the VSOTF (p = 0.01). The group

averaged DOF of keratoconic subjects was found to be approximately twice as

large as those of the other three groups.

When the pupil size is reduced to 3.5 mm, the average predicted DOF generally

increases, except for estimated values by the metric based on the VSOTF. In the

keratoconic group, a slight increase in the DOF is only seen at low spatial

frequencies. The results of Student‟s t-test show some significant differences of

the predicted DOF between the groups. Differences in the DOF between the

emmetropic and myopic group are found at all spatial frequencies (p = 0.03, 0.02,

0.01 for )5(

MTF , )10(

MTF and )15(

MTF , respectively) and through focus

VSOTF (p = 0.03). The presbyopic subjects again, show higher mean predicted

DOF values compared to the emmetropes. However only the difference of DOF

derived from the VSOTF between myopes and presbyopes was found to be

significant (p = 0.02). Although the average predicted DOF of keratoconic

subjects is smaller for a 3.5 mm pupil compared to the value with a 5 mm pupil

71

diameter (except for )5(

MTF ), it is still significantly larger than those values

found in the other clinical groups (all p < 0.005).

A correlation analysis was performed between the HOA RMS and the predicted

DOF for all 106 subjects (i.e., grouped data for all emmetropes, myopes,

presbyopes and keratoconics). The total HOA RMS showed a significant

correlation with the DOF based on all four metrics (Pearson‟s r = 0.64, 0.55, 0.45

and 0.67 in a 5 mm pupil, and Pearson‟s r = 0.79, 0.81, 0.81 and 0.88 in a 3.5 mm

pupil, all p < 0.001) for )5(

MTF , )10(

MTF , )15(

MTF , and through focus

VSOTF, respectively.

3.3.4 Influence of threshold level to the predicted DOF

To study the influence of chosen threshold level to the predicted DOF, the DOF

values of the four clinical groups are recalculated with a 50 percent threshold.

The group means of the predicted DOF values for the four considered groups

derived from different image quality metrics are presented in Table 3.3. After

lower the threshold to 50 percent, the mean DOF of the four considered groups

show large amount of increase compared to the value derived at an 80 percent

threshold. Emmetropes still have the smallest value of averaged DOF ranging

from 0.65 to 1.30 D and from 0.57 to 1.59 D for a 5 mm and a 3.5 mm pupil

diameter, respectively. Keratoconics show highest averaged DOF, ranging from

2.85 to 3.13 D and from 2.34 to 2.79 D for a 5 mm and a 3.5 mm pupil diameter,

respectively.

For a 5 mm pupil diameter, Student‟s t-test revealed differences in the predicted

DOF only at low (5 cpd) spatial frequencies between the young emmetropes and

myopes (p = 0.01, 0.13, 0.31, and 0.06 for the DOF derived from )5(

MTF ,

)10(

MTF , )15(

MTF , and VSOTF, respectively). Significant differences were

observed in the predicted DOF between the young emmetropic and the

presbyopic group (all p ≤ 0.05). Significant differences in the predicted DOF

between young myopes and presbyopes were also found except for the low spatial

frequency (p = 0.16, 0.02, 0.02, and 0.01 for the DOF derived from )5(

MTF ,

)10(

MTF , )15(

MTF , and VSOTF, respectively). The group averaged DOF of

72

keratoconic subjects was found to be approximately three times as large as those

of the other three groups.

In a smaller 3.5 mm pupil, the average predicted DOF generally increases, except

for estimated values by the metric based on the VSOTF. In the keratoconic group,

on the other hand, average DOF based on all four IQMs showed lower value

compared to the results in a 5mm pupil. A Student‟s t-test was performed to

reveal the differences of the predicted DOF between the groups. Differences in

the DOF between the emmetropic and myopic group are found at all spatial

frequencies (p = 0.02, 0.02, 0.02 for )5(

MTF , )10(

MTF and )15(

MTF ,

respectively) and through focus VSOTF (p = 0.02). The presbyopic subjects again,

show higher mean predicted DOF values compared to the emmetropes. The

differences of DOF derived from the )15(

MTF and VSOTF between myopes

and presbyopes were also found to be significant (p = 0.03 and 0.04). The average

predicted DOF of keratoconic was again significantly larger than those of the

other clinical groups (all p < 0.005).

Since the 80 percent threshold is considered to be close to the 3 dB level of signal

energy, the DOF presented in the following sections of results were all calculated

with an 80 percent threshold.

3.3.5 Comparison of response to changes of spherical aberration in

different clinical groups

The 3D model of DOF(LSA) estimator was used to evaluate the effect of

different levels of LSA on DOF of subjects from the four clinical groups. The

top-view of DOF(LSA) based on )10(

MTF for four typical subjects from each of

the considered clinical groups are shown in Figure 3.5. Due to the different

structure of HOA present in individuals, the response of DOF to changes of LSA

varies.

73

Figure 3.5 Examples of the estimated DOF(LSA) for different subjects from each

of the considered clinical groups.

Special attention was paid for the estimation of DOF for keratoconic subjects. As

seen in Figure 3.5(d), for a keratoconic subject AN, the through focus

)10(

MTF showed dual peaks when approximately -1.5 D of LSA was added to

the original wavefront. In this case, the DOF is defined as the sum of the discrete

defocus regions which keep the )10(

MTF above the selected threshold level

rather than a continuous defocus range.

74

3.3.6 Effect of varying spherical aberration on DOF of presbyopes

Figure 3.6 Simulated average influence of LSA on DOF in presbyopic group in (a)

a 5 mm, and (b) a 3.5 mm pupil diameter.

To simulate the impact of LSA induced, for example, by a varifocal or

progressive power contact lens on the DOF, the change of depth of focus across

different LSA values ranging from 3 D to +3 D with a step of 1/8 D were

calculated for the group of 32 presbyopic eyes. The group average result is shown

in Figure 3.6, where it is evident that the DOF increases with the introduction of

either positive or negative LSA, for all the considered IQMs.

75

Figure 3.7 Retinal images simulation with different levels of LSA and defocus for

a presbyopic subject DFB. This subject was representative of the presbyopic

group and had +0.175 D of natural longitudinal spherical aberration.

LSA of 3 D (either positive or negative) will lead to an increase of approximately

0.4 D and 0.5 D in the predicted DOF for low spatial frequencies (5 cpd) at a

5 mm and 3.5 mm pupil diameter, respectively. The improvement of DOF

decreases at higher spatial frequencies. For a 5 mm pupil diameter, DOF derived

by )10(

MTF and )15(

MTF increases by 0.25 D and 0.2 D, respectively. For a

3.5 mm pupil diameter, the increase of DOF at 10 cpd and 15 cpd are 0.35 D and

0.3 D. The DOF predicted from the VSOTF is observed to increase by 0.25 D and

0.35 D for a 5 mm and a 3.5 mm pupil diameter, respectively. Figure 3.7 shows

an example of a series of simulated retinal images of Snellen “E” letter at 0.3

logMAR for a presbyopic subject DFB for a 5 mm pupil diameter. The retinal

image quality becomes worse when a higher amount of LSA is introduced,

showing an obvious trade-off for the DOF enhancement. However, it can also be

76

noticed that with higher levels of LSA, the eye shows more tolerance to the

increase in defocus (i.e., an enhanced depth of focus).

3.3.7 Model of positive LSA induced by refractive surgery and its effect on

DOF of myopic subjects

A set of positive LSA was induced to the myopic group of eyes to model the

DOF affected by surgically induced positive LSA. Up to 2 D of LSA can be

induced after correction of 6 D myopia in a 6 mm pupil (Hersh et al., 2003; Lee

et al., 2003; Kohnen et al., 2005; Yoon et al., 2005) and up to 2 D of LSA can be

induced after orthokeratology (Joslin et al., 2003; Berntsen et al., 2005). The

interaction of DOF with positive LSA up to +3 D was simulated with a step of

0.125 D (Figure 3.8). As expected, similar results to the presbyopic group were

observed. In a 5 mm pupil, an increase of approximately 0.4 D, 0.3 D, 0.2 D and

0.3 D are achieved after introduction of 3 D LSA, for mean DOF estimated by

)5(

MTF , )10(

MTF , )15(

MTF and through focus VSOTF, respectively.

Slightly higher values are obtained for a 3.5 mm pupil, which are 0.4 D, 0.35 D,

0.3 D and 0.3 D, respectively.

Figure 3.8 Simulated average effect of positive LSA on DOF of the myopic group

for (a) a 5 mm, and (b) a 3.5 mm pupil diameter.

77

3.4 Discussion

In this study, the calculated depth of focus of various clinical groups including

emmetropes, myopes, keratoconics and presbyopes was evaluated. As a result of

high levels of higher order aberrations, the keratoconic eyes showed the largest

predicted depth of focus for the natural eye, but at the expense of poorer image

quality. The presbyopes and myopes also showed slightly higher levels of higher

order aberrations than the emmetropes and this was again reflected in a slight, but

significant increase in the predicted depth of focus of the natural eyes of these

groups. Myopes have been shown to have slightly larger depth of focus than

emmetropes in previous objective (Rosenfield & Abraham-Cohen 1999) and

simulation studies (Collins, Buehren & Iskander, 2006) of depth of focus. A

number of reports have also found that presbyopes have increased levels of higher

order aberrations compared to younger eyes (McLellan, Marcos & Burns 2001;

Amano et al., 2004; Fujikado et al., 2004; Atchison & Markwell, 2008) and this is

again reflected in a slight increase in the natural depth of focus of the eye.

The choice of image quality metrics to model the depth of focus will influence the

predicted outcomes, but metrics calculated at the retinal image plane are thought

to be superior to those in the pupil plane for predicting subjective refraction

(Thibos et al., 2004). To study the predicted DOF, three retinal image quality

metrics (IQMs) derived from azimuthally-averaged modulation transfer

function )(

MTF , at spatial frequencies of 5 , 10, and 15 cpd were used. For

the overall spatial frequency range assessment I used the visual Strehl ratio

(VSOTF) that has been found to correlate well with subjective visual

performance in a number of studies (Guirao and Williams, 2003; Cheng, Bradley

& Thibos, 2004). The predicted DOF for natural eyes was found to decrease at

higher spatial frequencies, which agrees with the objective findings of earlier

studies (Tucker & Charman, 1986; Legge et al., 1987; Atchison, Charman &

Woods, 1997). The choice of arbitrary threshold level also significantly

influences the simulated outcome. A higher threshold value in general produces

lower value of predicted DOF. When an 80% threshold level was used, the

predicted DOF of the normal subjects (emmetropes, myopes and presbyopes) in

this study matched well with the range of DOF reported by Marcos (1999). They

78

found the average DOF calculated from three subjects‟ wavefront for a 6 mm

pupil decreased from 0.75 to 0.4 D, when spatial frequency increased from 5 cpd

to 15 cpd. A similar range of 0.78 to 0.39 D was found in this study.

The simulation results also showed that the induction of additional positive or

negative LSA in the eye will modestly increase the DOF. In most of the cases,

introducing higher amounts of LSA to the original wavefront aberration resulted

in a monotonically extended DOF (although the influence degrades at higher

spatial frequencies), and at the same time resulted in a rapidly worsening of

retinal image quality. However, this relationship between LSA and DOF is far

more complex for keratoconic subjects, because of the high levels of pre-existing

monochromatic aberrations in comparison to the induced LSA.

In presbyopes, the introduction of LSA to the eye is a commonly used optical

method to extend the depth of focus. It is used as a design feature of bifocal

contact lenses and intraocular lenses (Plakitsi & Charman, 1995; Mierdel et al.,

1999; Nio et al., 2003; Marcos, Barbero & Jimenez-Alfaro, 2005; Franchini,

2007). The modelling shows modest improvements in depth of focus in the range

from about 0.25 to 0.5 D (depending on the interaction between factors such LSA

level, pupil size and image metric). This improvement in depth of focus comes at

the expense of a slight overall loss of image quality across the extended depth of

focus range, but this is a compromise that many presbyopes are prepared to

accept (Nishi et al., 2006).

The modelling of the influence of positive LSA on the depth of focus of myopes

provides some understanding of the likely optical consequences of common

refractive surgery procedures such as LASIK, PRK and orthokeratology. All of

these refractive procedures are known to increase the level of positive spherical

aberration of the eye (Seiler et al., 2000; Moreno-Barriuso et al., 2001; Marcos et

al., 2001; Berntsen et al., 2005; Kohnen et al., 2005), primarily as a result of

reducing the prolate shape of the cornea (so called sphericalisation of the cornea).

Like the results for the presbyopes, there was a clear increase in depth of focus

associated with increasing levels of positive LSA at the expense of a slight loss of

overall image quality. These effects may delay the need for full near vision

79

correction for a few years as these myopic subjects reach the age of presbyopia

(Artola et al., 2006).

In this study, the natural levels of overall higher order aberrations showed strong

correlation with the predicted DOF. This result was largely driven by the

keratoconics, whose extremely high levels of HOAs are associated with large

increases in predicted DOF, at the expense of overall image quality.

Figure 3.9 The effect of interaction of the primary and 0.05 µm of secondary SA

on DOF.

The primary spherical aberration is not the only wavefront aberration that

contributes to increase the DOF. Study on the 3D model of DOF(LSA) in eyes

with relatively higher amount of secondary spherical aberration ( )( 0

6ZRMS ≥

0.04) reveals that there may be a positive interaction between the primary and

secondary spherical aberration to increase the DOF. A customized wavefront with

-0.05 µm of secondary spherical aberration in a 5 mm pupil is generated to study

the possible relationship. The change of its DOF at different level of LSA is

shown in Figure 3.9. It can be seen that the combination of certain amount of

secondary spherical aberration and the primary spherical aberration with the

80

different sign (different signs for 0

4C and 0

6C ) could greatly increase the DOF.

Further study is required to produce a better understanding on how the interaction

between LSA and other HOA can help to achieve a high DOF in the human eye.

In conclusion, the natural levels of higher order aberrations of the eye are

associated with the predicted depth of focus, with greater levels of higher order

aberrations leading to increased depth of focus. As a result, the myopes and

presbyopes showed slightly increased predicted levels of depth of focus compared

with the emmetropes and the keratoconic subjects showed large increases in

predicted depth of focus. The simulated addition of LSA to the presbyopic and

myopic eyes produced modest increases in DOF at the expense of slight losses in

image quality. All measurements in this study were performed in monochromatic

green light (555 nm). In reality, the chromatic aberrations in the human eye will

also affect the DOF.

81

Chapter 4. Estimation of depth of focus from wavefront

measurements

4.1 Introduction

The previous study described in Chapter 3 has shown that it is possible to

estimate the depth of focus (DOF) of the eye directly from wavefront

measurements using various retinal image quality metrics (IQMs). In such

methods, DOF is defined as the range of defocus error that degrades the retinal

image quality calculated from IQMs to a certain level of the maximum value

(Legge et al., 1987; Jansonius & Kooijman, 1998; Marcos, Moreno & Navarro,

1999). Although different retinal image quality metrics are used, currently there

have been two arbitrary threshold levels adopted, 50% (Legge et al., 1987;

Jansonius & Kooijman, 1998) and 80% (Marcos, Moreno & Navarro,

1999). There has been limited study of the relationship between these threshold

levels and the actual measured DOF.

The aim of the study reported in this chapter was to estimate the threshold level

of IQMs, which would correlate with the subjectively measured DOF and lead to

a method for estimating DOF directly from a single measurement of wavefront

aberration.

4.2 Subjects and methods

4.2.1 Subjects

The experiment was performed on 17 adult subjects (9 males and 8 females) from

students and staff members of the School of Optometry, Queensland University

of Technology. The mean age of the subjects was 30 years, ranging from 18 to 46

years. The group had a mean spherical equivalent refraction error of 0.95 D

(ranging from 5.0 D to +1.0 D) and the mean cylindrical refraction was 0.32 D

(ranging from 0 D to 0.5 D). All subjects had Snellen visual acuity of at least 6/6

in the tested eye with their best correction. All subjects reported having no history

82

of significant eye diseases. The subjects gave written informed consent and the

study met the requirements of the University Human Ethics Committee and was

conducted in accordance with the Declaration of Helsinki (Appendix C).

4.2.2 Apparatus

A customized wavefront sensing system was constructed to measure the eye‟s

wavefront and DOF under different target vergences. The optical layout of the

wavefront sensing system, which is based on the HASO32TM

Hartmann Shack

wavefront sensor (Imagine Eyes, Orsay, France) is shown in Figure 4.1. In one

pilot study (see Chapter 6), the HASO32 TM

wavefront sensor was calibrated and

benchmarked against a Complete Ophthalmic Analysis System (COASTM

,

Wavefront Science, Inc) and showed high correlation and good repeatability.

Figure 4.1 Wavefront sensing system to monitor the ocular wavefront aberration

and measure the depth of focus.

In the wavefront operation channel is a 10 D achromatic microscopic lens L1

with its back focal point located at the eye‟s entrance pupil. Lenses L5 and L4, L3

and L2 are set up in an afocal form, which produce an image of the experiment

target on the back focal point of L2. The image then acts as the object of Badal

lens L1 and its distance to L1 is controlled by the movement of the Badal stage.

The Badal stage is based on a 300 mm long travel stage driven by a fine tuning

knob. In this optical setting, moving the object every 1 cm brings approximately

1 D of change in the target vergence (Atchison, 1995). The target used in the

experiment consists of a Snellen letter chart printed on a piece of clear transparent

83

glass, which is attached to a piece of diffused film and back illuminated by a

distant 633 nm LED light source. The target‟s contrast is 80% with a luminance

of approximately 600 cd/m2. During the test, the subject is asked to focus on the

letter in the middle of the first line of the letter chart. Through the optics, the

letter size produces a visual angle of approximately 20 minutes of arc (0.60

logMAR detail, similar to reading print of 12 point font size at a distance of

40 cm away).

4.2.3 Protocol

The subject‟s head was comfortably positioned in an adjustable, heavy, custom-

made headrest without a bite bar. The head‟s position with respect to the

wavefront sensing system could be adjusted in three dimensions by the operator.

Before the commencement of the measurements, all subjects were given a short

training on the system to allow them to become familiar with the task of

recognizing the “just noticeable blur”, which was defined as the first detectable

sign of changes in the clearness and sharpness of the displayed target. Then, the

subject‟s tested eye was cyclopleged and dilated by 2 drops of cyclopentolate

HCL (1% MinimsTM

, 0.5 mL, Bausch & Lomb Australia, Pty Ltd.). The

measurement then started about 30 minutes later, after the maximum

pharmacological effect of cyclopentolate was reached (Manny et al., 1993). The

subject‟s defocus level was controlled by moving the Badal stage. The operator

adjusted the position of the Badal stage to approximately compensate the

subject‟s subjective defocus. The astigmatism derived from the individual

subjective refraction was corrected with a trial lens mounted in front of the

artificial pupil (see Figure 4.1).

Under full cycloplegia and pupillary dilation, the subject was asked to fixate on

the target through an artificial pupil, while the fellow eye was fully occluded by a

black eye patch. In the experiments, two pupil diameters were considered, 5 mm

and 3.5 mm, to simulate the viewing under mesopic and photopic conditions. The

subject was instructed to identify the “clear” position (corresponding to the

subjective best focus) and “just noticeable blur” in both negative and positive

84

directions, corresponding to the movement of the Badal stage towards and away

from the eye.

The procedure for measuring the subjective DOF was as follow. First, the

operator adjusted the position of the Badal stage to help the subject finding a

“clear” position in which the target could be viewed as clear and sharp as possible.

Then the operator slowly moved the Badal stage in one randomly selected

direction until the “just noticeable blur” was reported by the subject. The scale

reading of the Badal stage was recorded by the operator. The operator then moved

the Badal stage in the opposite direction. During the movement, the subject

observed the “clear” position again, and as the movement continued, the subject

observed the appearance of “just noticeable blur”. The scale reading of this

position was also recorded. These two limits of Badal stage movement constituted

one measurement of DOF. For each pupil diameter, five sets of DOF

measurements were performed. To avoid the possibility that the subject may

remember the time it took to observe the “just noticeable blur” away from the

“clear” position, the operator moved the Badal stage at a variable speed, and the

moving speed was controlled to be less than approximately 0.2 D/s. At the end of

the experiment, the subject‟s accommodative response was examined to ensure

that there was no significant (≤ 0.1 D) recovery of accommodation.

The ocular aberrations were also recorded by taking 10 wavefront measurements

at each position (towards and away from the eye) when the “just noticeable blur”

was observed by the subject (total 20 measurements). The higher order aberration

components did not change significantly across the defocus range. Wavefront

measurements were performed with the artificial pupil removed for the fully

dilated pupils. The higher order aberration components of the wavefront data

were then averaged and used for computing the visual Strehl ratio based on the

optical transfer function (OTF), which was later used as an image quality metric

for matching the subjective DOF.

Before commencing each set of measurements, the pupil position was checked by

comparing the pupil positions on the sensor CCD with and without the artificial

pupil in the HASO control software (Imagine Eyes, Orsay, France). The

measurement had a resolution of 0.01 mm. If the displacement of the pupil was

85

greater than 0.3 mm then the position of the subject‟s head was corrected by the

operator.

4.2.4 Determination of the threshold for estimating DOF from wavefront

data

One can estimate the theoretical DOF by calculating the range of defocus errors

which degrades the retinal image quality to a certain level of the possible

maximum value. This definition has been adopted earlier by Marcos, Moreno and

Navarro (1999), who chose an 80% threshold, while a 50% threshold was used by

Legge et al. (1987) and Jansonius and Kooijman (1998). In this study, the

augmented visual Strehl ratio based on the optical transfer function (VSOTF) was

chosen as the retinal image quality predictor to estimate the matching threshold

based on the subjectively measured DOF.

The VSOTF is currently considered one of the best descriptors of visual

performance that can be directly derived from the wavefront aberrations data

(Marsack, Thibos & Applegate, 2004)

and is strongly correlated with the

subjective visual acuity (Cheng, Bradley & Thibos, 2004). Its augmented version

has used (Iskander, 2006)

yxyxDLyxN

yxyxyxN

dfdfffOTFffCSF

dfdfffOTFffCSFVSOTF

,,(

,Re,

where yxDL ffOTF , denotes the diffraction limited optical transfer function,

yxN ffCSF , is the neural contrast sensitivity function, and yx ff , are the

spatial frequency coordinates. Here the VSOTF was based on calculated optical

transfer function across all spatial frequencies up to 60 cycles per degree (cpd)

(Iskander, 2006).

To estimate DOF from an image quality metric, a through-focus calculation is

required. A dedicated simulation program was written from first principles in

Matlab (The MathWorks, Inc., Natick, MA) to calculate the through-focus

VSOTF in the presence of subject‟s original higher order aberrations (HOA). The

flow chart of the computer simulation program is shown in Figure 4.2.

86

Figure 4.2 Flow chart of simulation program for calculating through-focus

VSOTF.

In the first step, wavefront data, consisting of a set of Zernike coefficients up to

and including the 8th radial order, are imported. Since the wavefront data was

acquired for the subject‟s dilated pupils always larger than 5 mm, for consistency,

in step 2, the original Zernike coefficients were resampled to a specific pupil

diameter of either 5 mm or 3.5 mm using the method of Schwiegerling (2002).

Since the subject‟s sphero-cylindrical error was corrected during the subjective

DOF measurements, only the effect of HOAs on VSOTF is considered in the

simulation. The estimates of sphero-cylinder need to be first removed from the

wavefront. One can achieve that by simply setting the first six Zernike

coefficients to zero. However, it has been shown that the Maloney‟s best sphero-

cylinder (S/C) calculated in the refractive power domain has the best correlation

to the subjective sphero-cylindrical refractive error of the eye (Iskander et al.,

2007). Hence, a transformation from the wavefront domain to the refractive

power domain is performed. In step 3, the refractive power distribution across the

pupil, ),( rF is calculated from the resampled wavefront ),( rW using the

method of the refractive Zernike power polynomials (Iskander et al, 2007).

),(),( rWrF

where Z denotes the wavefront to refractive power transformation.

87

Following that, in step 4, the best S/C is estimated using the method of Maloney

et al. (1993) and subtracted from the previously obtained refractive power. This

leads to the new refractive power, given by

SCZerout FFF

whereZerF and

SCF is the refractive power calculated from the subject‟s original

wavefront and the estimated best S/C, respectively. To simulate through-focus, in

the through-focus loop, a desired level of defocus is added to the refractive power

from step 4. In step 5, an inverse transformation from the refractive power

domain to the wavefront domain is performed (Iskander, Davis & Collins, 2007)

),(),( 1 rFrW outout

which is then used, in step 6, to calculate the VSOTF. From the wavefront

),( rWout with a new defocus value, the corresponding point spread function and

the optical transfer function (OTF) is calculated using fast Fourier transforms

(Artal, 1990; Iskander, Collins, Davis & Carney, 2001). The through-focus

VSOTF is obtained in step 7. The calculation was repeated in a total of 49 steps

corresponding to a defocus level ranging from 3 D to +3 D in 0.125 D intervals.

An example of how the matching threshold value is estimated for data acquired

from averaged wavefront measurements of a subject in a 5 mm pupil is shown in

Figure 4.3. After obtaining the through-focus VSOTF of the subject from

wavefront data, an iterative calculation was performed, reducing the threshold

level from 99% of the maximum achievable VSOTF value, until the effective

range of defocus error produced by 12 DD gives the closest match to the

subjectively measured DOF. This threshold value was taken as the matching

threshold to estimate the DOF for this subject. The same procedure was

performed for measurements of each individual subject.

88

Figure 4.3 Estimation of matching threshold based on through-focus VSOTF.

4.2.5 Statistical analysis

Averages are represented in term of mean SD (standard deviation). Collected

data including subjective DOF, individual matching thresholds and HOA RMS in

both a 5 mm and a 3.5 mm pupil were tested for normal distribution. For

correlating the estimated VSOTF threshold values with other measures of retinal

image quality, Pearson‟s correlation coefficient was calculated.

89

4.3 Results

4.3.1 Individual matching threshold of the subjects

The individual matching threshold of 17 subjects was estimated using the

algorithm described in Figure 4.2. Data including the subjective DOF, the

matching threshold, HOA RMS and spherical aberration were collected for both a

5 mm and a 3.5 mm pupil diameter. The group mean values were shown in Table

4.1. The subjective DOF measured in the experiment ranged from 0.55 D to

1.05 D, with a mean value of 0.79 ±0.15 D, in a 5 mm pupil. When the pupil

diameter was limited to 3.5 mm, the mean DOF increased to 1.30 ±0.21 D, while

the total HOA RMS and spherical aberration reduced compared to those in a

5 mm pupil. The group means of the individual threshold estimated from the

through-focus VSOTF were 65.6 ±10.1% (ranged from 45~83%) and

36.9 ±18.4% (ranged from 15~83%) in a 5 mm pupil and a 3.5 mm pupil,

respectively.

Table 4.1 Group average results in a 5 mm pupil and a 3.5 mm pupil diameter.

Pupil

Size

Subjective

DOF (D)

Matching

Threshold

(%)

HOA RMS

(µm)

Z(4,0)

(µm)

DOF (D)

estimated

from a

50%

Threshold

DOF (D)

estimated

from an

80%

Threshold

5 mm 0.79 ± 0.15 65.6 ±

10.1

0.30 ±

0.08

0.075 ±

0.062

1.12±0.34 0.58±0.17

3.5 mm 1.30 ± 0.21 36.9 ±

18.4

0.12 ±

0.05

0.020 ±

0.015

1.07±0.54 0.52±0.24

To estimate DOF directly from wavefront measurements in a robust manner,

correlation analysis was performed between subjective DOF and HOA RMS,

subjective DOF and SA, matching threshold (from the through-focus VSOTF)

and HOA RMS, and estimated threshold and SA.

90

For a 5 mm pupil diameter, weak correlation was found between the subjective

DOF and HOA RMS (r=0.36, p>0.05), and between subjective DOF and SA

(r=0.24, p>0.05). The matching threshold showed significant correlation with the

total HOA RMS (Pearson‟s r=0.88, p<0.001). Moderate correlation was shown

between the estimated threshold and the spherical aberration value in the eye

(r=0.52, p=0.05). For a 3.5 mm pupil diameter, there was no significant

correlation observed between the DOF and HOA RMS. There was weak

correlation between DOF and SA (r=0.49, p>0.05). No correlation was found

between the estimated threshold and the spherical aberration value (Pearson‟s

r=0.36, p>0.05). However, significant correlation was found between the

estimated threshold and the HOA RMS (Pearson‟s r=0.62, p<0.05).

It was found that the DOF matching threshold and HOA RMS has the strongest

correlation (Pearson‟s r=0.88, p<0.001) in a 5 mm pupil (shown in Figure 4.4a,

with 95% confidence bands). By fitting a linear function to the data, the following

equation was obtained:

2)30.0(05.10726.12

99.33)(86.106_

RMSHOA

RMSHOApredictedevelThresholdL

(4-1)

This equation (including 95% confidence intervals) can be used to calculate the

individual threshold level for estimating the DOF using VSOTF from wavefront

measurements in subjects with normal amount of HOA.

91

Figure 4.4 Correlation between the estimated threshold and HOA RMS (a) in a

5 mm pupil, and (b) in a 3.5 mm pupil. Solid line is the linear regression and

dashed line is the 95% confidence band.

Since the astigmatism correction by the trial lens had a limited precision of 0.25 D,

it was also of interest to investigate whether the presence of the residual

astigmatism can significantly affect this result. Accordingly, additional

calculations have been performed in which we first found the sphero-cylindrical

difference between the trial lens astigmatic correction and the one measured with

the wavefront sensor (note that the wavefront aberrations were measured without

92

the trial lens) and then retained the astigmatic difference (residual astigmatism) in

the VSOTF calculation. To find the difference, we have transformed the two

sphero-cylinder values to orthogonal components, subtracted them, and

transformed those differences back to a sphero-cylindrical representation. After

leaving the residual astigmatism in the through-focus simulation, the correlation

between the estimated VSOTF threshold and the HOA RMS value was still

significant but dropped from the original r=0.88, p<0.001 to r= 0.77, p<0.003.

Since the HOA RMS value is a pupil plane based IQM, the correlation between

the estimated threshold and the VSOTF value (at zero dioptres of defocus) was

also examined, which is known to be a good representation of retinal image

quality. However, for a 5 mm pupil diameter, only moderate but significant

correlation was found between the estimated DOF threshold and VSOTF at zero

defocus(r=0.68, p=0.025).

The DOF estimated from through-focus VSOTF using fixed thresholds (i.e., 50%

and 80%) was also calculated and shown in Table 4.1. The group mean of the

estimated DOF calculated with a fixed threshold of 50% and 80% were

1.12 ±0.34 D and 0.58 ±0.17 D in a 5 mm pupil, and 1.07 ±0.54 and 0.52 ±0.24 in

a 3.5 mm pupil, respectively. The estimated DOF using a fixed threshold in a

smaller pupil was found to produce a larger error compared to the DOF

subjectively measured.

4.3.2 Comparison of predicted DOF of subjects from three different clinical

groups

Equation (4-1) was used to calculate the individual matching thresholds for a set

of retrospective wavefront data. These wavefront measurements were collected

from the right eyes of subjects from three different clinical groups: young

emmetropes (n = 20), young myopes (n = 19), and presbyopes (n = 32). The same

set of wavefront data has been used in Chapter 3. Changes were made in the

simulation program (see Figure 4.2) to calculate the subject‟s DOF with an

individual matching threshold value, as shown in Figure 4.5.

93

Figure 4.5 Algorithm to estimate DOF with a predetermined threshold based on

the eye‟s HOA.

The DOF of subjects from the three refractive groups were estimated with the

threshold estimated for a 5 mm pupil. The result was shown in Table 4.2. The

group mean DOF of young emmetropes, young myopes, and presbyopes were

0.72 ±0.12 D, 0.82 ±0.21 D, and 0.88 ±0.16 D, respectively. Student‟s T-test

revealed significant differences between the estimated DOF of emmetropes and

myopes (p<0.05) and between emmetropes and presbyopes (p<0.001). However,

no significant difference was found between the DOF of myopes and presbyopes

(p=0.09).

Table 4.2 Group mean of estimated DOF of the three refractive groups.

Clinical groups Group mean of estimated DOF (D)

Emmetropes (n = 20) 0.72 ± 0.12

Myopes (n = 19) 0.82 ± 0.21

Presbyopes (n = 32) 0.88 ± 0.16

94

4.4 Discussion

A novel method to estimate the individual threshold from through-focus VSOTF

for calculating the DOF of normal subjects from their wavefront aberrations has

been developed in this study. The threshold estimating method was based on the

subjective DOF measurements of real subjects using the defining criterion of

“just noticeable blur”. Therefore, it provided practical validation that the DOF

estimated from wavefront aberrations can correlate with the DOF measured

subjectively.

The DOF subjectively measured for the subjects in the experiment ranged from

0.55 D to 1.05 D with a mean value of 0.79 ±0.15 D, and ranged from 0.80 D to

1.61 D, with a mean value of 1.31 ±0.21 D, in a 5 mm pupil and a 3.5 mm pupil,

respectively. These values match well with the range of results found in young

subjects from 0.8 to 1.2 D (in a pupil size ranging from 3 to 5 mm) as reported by

Ogle and Schwartz (1959), Tucker and Charman (1975), and Wang and Ciuffreda

(2004). Ogle and Schwartz‟s measurements were based on 50% probability of

resolving a 20/25 checker board. Tucker and Charman‟s measurements were

based on 80% probability of achieving 90% of the optimal Snellen acuity. In

Wang and Ciuffreda‟s study (2004), the subjects viewed through a dual-channel

Badal optical system, and made judgments of when the test target showed “just

noticeable blur”.

Using different definitions of DOF are likely to affect the measured value of

subjective DOF (Wang & Ciuffreda, 2006). In clinical or research applications,

the range of defocus which decreases the visual acuity or contrast sensitivity to a

certain limit is often used as a criterion for DOF (Ogle & Schwartz, 1959; Tucker

& Charman, 1975; Legge, Mullen, Woo & Campbell, 1987). For real life

scenarios, the perception of “blur” can be considered to be a more relevant

criterion (Campbell, 1957; Atchison, Charman & Woods, 1997). Atchison et al

(2005) defined three levels of blur limits as: “noticeable”, “troublesome” and

“objectionable”. The authors found the magnitudes of “troublesome” and

“objectionable” limits were approximately 1.6-1.8 times and 2.1-2.5 times greater

than the “noticeable” limits, respectively. The widely adopted criterion “just

noticeable blur” has been chosen in this experiment to measure the subjective

95

DOF, but it is expected that a larger DOF would be obtained if a criteria of

“troublesome blur” or “objectionable blur” were chosen. Furthermore, DOF

defined by the blur criterion of “objectionable blur” may provide a closer match

to the acceptance of multifocal optics (simultaneous vision) by presbyopic

patients.

The choice of image quality metrics to estimate the depth of focus will influence

the predicted outcomes, but metrics calculated at the retinal image plane are

thought to be superior to those in the pupil plane for predicting subjective

refraction (Thibos, Hong, Bradley & Applegate, 2004). To study the predicted

DOF, the augmented visual Strehl ratio of the OTF (VSOTF) was used as the

retinal image quality metric covering overall spatial frequencies up to 60 cpd.

VSOTF has been found to correlate well with subjective visual performance in a

number of studies (Guirao & Williams, 2003; Cheng, Bradley & Thibos, 2004).

When calculated in through-focus, it represents the interaction between HOA and

defocus on retinal image quality (Collins, Buehren & Iskander, 2006). In this

study, a strong correlation was found between DOF threshold and HOA RMS in a

5mm pupil. Known as a better representative of retinal image quality, the VSOTF

at zero defocus was expected to have better correlation to the DOF threshold.

However, a weaker but still significant correlation was observed between the

DOF threshold and the VSOTF value at zero dioptres. This may be due to the fact

that for most of the subjects, the peak value of VSOTF does not locate at zero

defocus level.

The frequency-dependant features of the DOF was not investigated in this study

(the used target contained a range of spatial frequencies), but had been

extensively studied by other groups (Tucker & Charman, 1986; Legge, Mullen,

Woo & Campbell, 1987; Atchison, Charman & Woods, 1997).

It is shown that using a fixed IQM threshold (e.g. 50% or 80%) to estimate the

DOF may produce results significantly varying from the subjectively measured

DOF. In this study, the estimated DOF from through-focus VSOTF with a 50%

threshold level had an average error of 0.33 ±0.25 D and 0.55 ±0.34 D in a 5 mm

pupil and a 3.5 mm pupil respectively, compared to the subjective DOF.

Calculating the DOF with an 80% threshold averagely underestimated the DOF

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by 0.21 ±0.15 D and 0.80 ±0.32 D, in a 5 mm pupil and a 3.5 mm pupil,

respectively. In general, use of fixed thresholds caused larger errors for the DOF

estimation in a smaller pupil. The application of Equation (4-1) to calculate the

individual thresholds has also been shown of subjects from three clinical groups

and estimated their DOF with the developed algorithm (shown in Figure 4.5). The

group mean of estimated DOF of myopes and presbyopes were found to be

significantly greater than that of emmetropes. However, no significant difference

was found between the mean DOF of myopes and presbyopes, which may due to

the fact that most presbyopic subjects in this study were also myopic.

The developed method to estimate the threshold for calculating the DOF from

wavefront aberration was affected by the subject‟s pupil size. The strong

correlation between the matching threshold level and HOA RMS was only

observed in a larger (5 mm) pupil. When pupil size was restricted to 3.5 mm, the

eye‟s blur circle was reduced. The magnitude of specific dominant HOA terms

(such as spherical aberration and coma) were also significantly lower than that in

a 5 mm pupil. These changes will significantly influence the details of the

calculated through-focus IQMs, and therefore, affect the accuracy of threshold

and DOF estimation. The matching threshold estimation method is also limited

by the range of HOA RMS. It can be applied to predict the DOF of subjects with

normal amount and structure of HOA (Porter, Guirao, Cox & Williams, 2001;

Wang & Koch, 2003). For the eyes of keratoconic subjects or patients who have

undergone refractive surgery, their significantly higher amount of HOA may also

affect the accuracy of the method, or simply exceed the predictable range.

In this study, the subjective measurements and estimating of DOF were all

performed in monochromatic light. In natural scenes, the chromatic aberrations in

the human eye will also affect the DOF (Campbell, 1957). Legge et al. (1987)

used the method described by van Meeteren (1974) to calculate the depth of focus

for monochromatic and white light at different spatial frequencies and pupil sizes.

A very small increase was found for white light DOF compared to the one

calculated for monochromatic light. Experimental measurements also showed

only small differences (Campbell, 1957).

97

In conclusion, it is shown in this study that the IQM threshold level used to

theoretically estimate the DOF from wavefront aberrations can be adaptively

optimized for each individual subject, and this method is most reliable with larger

pupils (i.e., 5 mm pupil diameter). Using a fixed threshold level to estimate the

DOF in different subjects or for DOF of the same subject in different pupil sizes

may lead to erroneous estimates.

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Chapter 5. Subjective measurement of depth of focus in

keratoconic eyes

5.1 Introduction

Studies have been performed to compare the DOF in different refractive error

groups, with myopes reported to show slightly greater DOF than emmetropes

(Rosenfield and Abraham-Cohen, 1999; Collins, Buehren & Iskander, 2006;

Vasudevan, Ciuffreda & Wang, 2006). This could be due to increased levels of

higher order aberrations (HOA) in myopes (He et al., 2002) or to a difference in

sensitivity to blur in myopes (Thorn et al., 1998; Rosenfield and Abraham-Cohen,

1999). Hyperopes also show larger DOF compared to emmetropes (Vasudevan,

Ciuffreda & Wang, 2006), which may also be explained by the higher corneal

asphericity and greater level of HOA in hyperopes (Llorente et al., 2004a). The

DOF of the human eye also increases with age. Presbyopes have been reported to

have higher DOF than younger subjects (Nio et al., 2000). These differences may

arise from pupil constriction and increased levels of HOA associated with

increased age (McLellan et al., 2001; Artal et al., 2002).

However, little appears to be known about the DOF in the eyes of keratoconics.

Since keratoconus results in significant increases in the level of HOA of the eye,

including spherical aberration, coma and trefoil (Maeda et al., 2002), this

population of subjects provides an opportunity to study the influence of these

HOA on DOF. This information has implications for the DOF of keratoconic

subjects as they reach presbyopia and their needs for near correction.

In Chapter 3, the DOF for a group of keratoconic subjects was theoretically

modeled. The predicted DOFs estimated by VSOTF of keratoconic were

approximately 2.5 times and 3 times larger than the mean values of normal eyes in

a 5 mm pupil, when fixed thresholds of 80% and 50% were used, respectively.

However, the predicted value may lack correlation to the subjective DOF.

Possible errors generated by using fixed thresholds when estimating the DOF in

individual eyes have also been demonstrated by Yi, Iskander & Collins (2010).

Due to the large amount of HOAs in the keratoconic eyes, there has not been a

99

method to effectively predict their DOF, which would correlate with the

subjectively measured DOF. The aim of this study was to measure the subjective

DOF of keratoconic eyes and compare it to that of normal subjects.

5.2 Methods

5.2.1 Subjects

The study was performed on two groups of subjects. The control group comprised

10 adult subjects (five males and five females) with Snellen visual acuity of at

least 6/6 in the tested eye with their best refractive correction. The mean age of

the control subjects was 28 years, ranging from 18 to 46 years. The group had a

mean spherical equivalent refractive error of 1.50 ±2.15 D (ranging from

5.50 D to +0.50 D) and the mean cylindrical refraction was 0.20 ±0.23 D

(ranging from 0.50 D to 0 D) in the right eye. All control subjects reported to

have no history of significant eye diseases or corneal injury and all were

experienced in psychophysical and optical experiments.

The second group consisted of five subjects (two males and three females)

diagnosed with keratoconus. This diagnosis was based on the presence of

significant asymmetry in the corneal topography map and an axial power of at

least 50 D at the cone apex. Because of the large differences in optical aberrations

between the two eyes of the keratoconic subjects (Burns et al., 2004), DOF

measurements were taken in both eyes of the subject. The ages of keratoconic

subjects ranged from 21 to 35, with a mean age of 27 ±6 years. The mean

spherical equivalent of the 10 keratoconic eyes was 0.65 ±3.53 D (ranging from

10.5 D to +1.75 D) and the mean cylindrical refraction was 1.95 ±1.36 D

(ranging from 5 D to 0.75 D). The level of experience of the keratoconus

subjects in psychophysical vision experiments was good, as all had previously

participated in experiments related to visual performance. The Snellen visual

acuity of the keratoconic subjects with spectacle correction ranged from 6/10 to

6/6. The subjects gave written informed consent and the study met the

requirements of the University Human Ethics Committee and was conducted in

accordance with the Declaration of Helsinki (Appendix C).

100

5.2.2 Apparatus

The optical layout of the apparatus with two Badal optical channels is shown in

Figure 5.1. Similar systems were used in earlier experiments of Legge et al. (1987)

and Wang and Ciuffreda (2004).

Figure 5.1 The two-channel Badal system. L1 and L2 are the Badal lenses, PM is

a first surface mirror and CBS is a 50:50 cube beam splitter.

The variable channel (Channel 1) of the system is aligned with the line of sight of

the subject‟s tested eye. It consists of a Badal lens L1 and a moveable target

(Target 1). The Badal lens is a 5 D achromatic lens with its secondary focal point

located at the entrance pupil of the tested eye. The target consists of a vertical

half-star image, which was divided by six spokes (30 degrees separation). The

image was printed on a piece of clear plastic sheet, which is attached to a piece of

diffuse paper, and back illuminated by a distal white light LED (120 cd/m2). In

such a setting, every centimeter of movement of the target will induce a change in

target vergence of approximately 0.25 D at the entrance pupil of the eye. The

standard channel (Channel 2) has the same components as Channel 1, with L2‟s

secondary focal point coinciding with the entrance pupil of tested eye. Target 2 is

always placed on the optical far point of the subject‟s tested eye. The two Badal

channels were combined together optically by a cube beam splitter (CBS,

transmittance: reflectance = 50:50). The two hemi-fields formed by the two

targets juxtaposed to one another as seen in Figure 5.1. In this setting, the

peripheral ends of the target entered the eye with an angle of approximately 3

101

degrees and the central area subtended an angle of about 0.6 degree. The reason

for using the star image as the target instead of a letter chart was to minimize the

possible interaction between high amounts of coma and trefoil in the keratoconic

eyes with defocus to cause orientation-specific blur of the target.

The subject‟s head was positioned in a heavy, customized headrest without the

use of a bite bar. The experiment operator could adjust the head position of the

subject in three dimensions to align the line of sight with the optical axis of the

Badal system. A 5 mm artificial pupil was mounted before the tested eye. Trial

lenses were used to correct the sphero-cylinder refractive error of the eye during

the experiment. The fellow eye was occluded with a black eye patch during

testing.

5.2.3 Protocol

During the measurement, the subjects need to determine the position of “clear”

and “just noticeable blur” in both positive and negative directions, corresponding

to the target moving away from and towards the eye, respectively. Since the best

achievable retinal image quality by using trial lens correction of keratoconic eyes

may still be lower than the normal eyes, a modified blur criterion from the widely

adopted “just noticeable blur” criterion was used to estimate the subject‟s DOF.

In this study, the “clear” position is the target position where it was judged by the

subject as being as clear and sharp as possible. The “just noticeable blur” position

is the position that the observer can first notice a change or loss of sharpness or

clarity in any part of the target compared to the “clear” position.

To minimize learning effects, a short pre-measurement training on the system was

given to all subjects. In the training session, different levels of target vergences

were induced by changing the location of target 1. At first, the two semi-halves of

the target were aligned on the same optical plane, which was coincident with the

optical far point of the tested eye. The subjects were instructed to fixate and to

keep in focus the central portion and nearby spokes of the standard target. Then

the experiment operator slowly moved the variable target in one direction, either

towards or away the eye. The subjects needed to determine when the “just

noticeable blur” appeared on the variable target and indicate this to the operator,

while maintaining focus on the central part of the standard target. The training

102

took about 10 minutes until the subject became familiar with the blur judgment

task.

DOF measurement was first performed in the control group in two conditions,

both with and without cycloplegia, to examine the effect of cycloplegia on DOF

and determine the need for cycloplegia in DOF measurement using this apparatus.

All measurements were performed in dim room illumination (< 10 lux).

Cyclopentolate HCL (1% MinimsTM

, 0.5 mL, Bausch & Lomb Australia, Pty Ltd.)

was instilled to cause cycloplegia and dilation of the subject‟s right eye. The DOF

measurements then started about 30 minutes later, after the maximum

pharmacological effect of cyclopentolate was reached (Manny et al., 1993).

The procedure of measurement involved first occluding the target in channel 1

and the experiment operator moved the target in channel 2 to the optical far point

of the subject‟s eye, to form a clear retinal image. Then the subject was allowed

to view through both channels 1 and 2. The operator then adjusted the location of

target 1 from L1 until it had equal clarity to target 2. At this stage, the two images

formed by target 1 and target 2 should have the same sharpness and appeared to

be at the same object plane to the subject‟s eye. The left semifield was formed by

target one and the right semifield was formed by target 2, as shown in Figure 5.1.

The operator recorded this position of target 1 on the scale as the “clear” position.

The operator then moved target 1 in one direction, (which was randomly selected)

and the subject was instructed to focus on the image of target 2 from the standard

channel. When “just noticeable blur” in the moving target 1 was reported by the

subject, the operator recorded the location of target 1. After that, the operator

slowly moved target 1 in the opposite direction. During the movement, the

subject first observed the “clear” position, and as the movement of target 1

continued, the appearance of “just noticeable blur” would be again noted by the

subject. The scale reading of this position was again recorded by the operator.

These two limits of the Badal stage movement represented one measurement of

DOF. The scale readings were later converted to target vergences and used for

calculating DOF. For each tested eye, five sets of such measurements were

performed. The moving speed of target 1 was not constant to avoid the possibility

that the subject may remember the time it took to observe the “just noticeable

103

blur” away from the “clear” position. The operator moved the target at a variable

speed, and the moving speed was controlled to be less than 0.2 D/s.

5.2.4 Wavefront and topographic data collection

The subject‟s wavefront aberration and natural pupil size when viewing the same

target was first examined by the wavefront sensing system described in Chapter 4.

The subjects who were included in the study showed pupil sizes ranging from

5.0-7.1mm under the experimental conditions. Therefore, the use of a 5 mm

artificial pupil could limit the subjects viewing pupil size. One subject with more

severe keratoconus, who had natural pupil sizes of 4.3 and 4.6 mm in the dim

room illumination, was excluded from the study.Wavefront aberrations of all the

included subjects were then measured with a Complete Ophthalmic Analysis

System (COASTM

, WaveFront Sciences, Inc.). In the control group, wavefront

aberrations of the subjects under conditions with and without cycloplegia were

both measured. For each subject, four sets of dynamic wavefront measurements

were acquired, each of which contains 30 wavefront samples (total of 120

wavefront samples). The wavefront measurements were fitted with a series of

Zernike polynomials up to and including the 8th radial order for a 5 mm entrance

pupil diameter, to match the size of the artificial pupil used in the optical setting

for DOF measurement. The average wavefront aberration was then calculated for

each of the subjects at the wavelength of 555 nm. Wavefront measurements were

also taken from both eyes of the keratoconic subjects without cycloplegia. The

subjects corneal topography was also measured using a Medmont E300

videokeratoscope (Medmont Pty Ltd, Australia) to estimate the keratoconus cone

dimensions and to calculate the wavefront error contributed by the anterior

corneal surface.

5.2.5 Data analysis

Analysis of the wavefront aberrations collected from all subjects was conducted

up to the 6th radial order using two radial orders less than the original wavefront

fit of 8th order (Neal et al., 2005). For the 10 subjects in the control group, the

HOA root mean square (RMS) value before and after cycloplegia was also

compared.

104

Two parameters from the corneal topography of keratoconic subjects were

calculated. They included the cone dimensions (cone location and volume) and

corneal wavefront aberrations. The topography files were first loaded into a

customized program written in Matlab (The MathWorks, Inc., Natick, MA). Then

the subject‟s corneal height data were decomposed into a finite series of Zernike

polynomials (Iskander, Collins & Davis, 2001).

,),(ˆ,1

P

p

ppZaC (5-1)

where C(ρ,θ) is the corneal surface, p = 1,..., P is the polynomial-ordering number,

),( pZ is the pth Zernike polynomial, pa is the coefficient associated with

),( pZ , ρ is the nomalized distance from the origin, θ is the angle, and ,

is the modeling noise, respectively.

The first six Zernike polynomials model the tilts, and the paraboloidal curvature

of the corneal surface. By setting the first six Zernike coefficients to zero, the

estimate of residual corneal elevation was obtained, which was the corneal height

from the original topography after a parabolic surface described by the first six

Zernike polynomials was subtracted. The approximated residual corneal elevation

is given by

P

p

ppres ZaC7

,ˆ,ˆ (5-2)

The cone dimensions in keratoconic eyes were then calculated using the method

of Schwiegerling (1997) by fitting a two-dimensional Gaussian function in the

following form to the cone on the residual corneal elevation.

2

2

0

2

2

00

2

)(

2

)(exp),(

yx

yyxxhyxf

(5-3)

where h0 is the peak height of the cone, (x0, y0) is the location of the peak relative

to the keratoscopic axis, and σx and σy are the lateral dimensions of the cone

determined by the cone height falls to 1/e (e is the Euler's constant equal to 2.718)

of the peak value. The volume of the cone was given by

105

02_ hvolumeCone yx (5-4)

while the distance of the peak of cone from the keratoscopic axis was calculated

by

2

0

2

00 yxd (5-5)

and the distance from the pupil center to the peak of cone was given by

Offsetddd

0 (5-6)

where Offsetd is the offset between keratoscopic axis and pupil center. Wavefront

aberrations contributed by the anterior corneal surface are the dominant

component of the total ocular wavefront in a keratoconic eye. The corneal

wavefront error of the keratoconic eyes was derived from the topographic data

using a 3D ray-trace method (provided by the Contact Lens & Visual Optics Lab,

QUT), which was also performed in a dedicated program written in Matlab. The

corneal wavefront error was calculated with a common axis (the line of sight

based on the center of entrance pupil) as the total wavefront. Therefore no

realignment was required to match the corneal wavefront data to the ocular

wavefront data.

5.3 Results

5.3.1 The effect of cycloplegia on DOF

DOF, HOA RMS, and spherical aberrations 0

6

0

4 ZZ of the control subjects‟

eyes measured with and without cycloplegia are shown in Table 5.1.

After the subjects underwent cycloplegia, the group mean of HOA RMS

increased slightly from 0.30 ±0.08 µm to 0.33 ±0.07 µm. A similar trend was

observed in the subjects‟ spherical aberration. The group mean DOF also

increased very slightly from 0.73 ±0.09 D prior to cycloplegia to 0.78 ±0.11 D

after cycloplegia. However, none of these changes in HOA, SA and DOF were

statistically significant (p>0.1). The range of subjective DOF measured with the

dual-channel Badal system matched well with the value of 0.79±0.15 D for a

106

5 mm pupil as found in the experiment of Chapter 4. Based on these results, the

DOF measurements in keratoconic group were performed without cycloplegia.

Table 5.1 The effect of cycloplegia on DOF, HOA RMS and spherical aberration

in a 5 mm pupil.

Without Cycloplegia With Cycloplegia

Subject HOA RMS

(µm)

SA

(µm)

DOF

(D)

HOA RMS

(µm)

SA

(µm)

DOF

(D)

Subject 1 0.30 0.05 0.86 0.33 0.05 0.89

Subject 2 0.44 0.02 0.61 0.42 0.03 0.63

Subject 3 0.43 0.07 0.68 0.47 0.11 0.79

Subject 4 0.23 0.06 0.77 0.27 0.07 0.83

Subject 5 0.17 0.08 0.62 0.25 0.10 0.86

Subject 6 0.29 0.09 0.75 0.27 0.09 0.64

Subject 7 0.27 0.08 0.74 0.31 0.07 0.87

Subject 8 0.24 0.07 0.68 0.28 0.07 0.72

Subject 9 0.30 0.06 0.77 0.31 0.06 0.68

Subject 10 0.31 0.15 0.87 0.39 0.19 0.95

Mean±

std

0.30 ±0.08 0.07±0.03 0.73

±0.09

0.33

±0.07

0.08

±0.04

0.78

±0.11

5.3.2 Result of measurements in keratoconic subjects

The HOAs up to and including the 6th radial order of the control group and

keratoconus group were compared (Figure 5.2) and the HOAs in keratoconic eyes

were found to be significantly higher than those in the normal eyes. Significant

differences were observed in the RMS values of spherical aberrations ( 0

6

0

4 ZZ ),

coma-like aberrations ( 1

5

1

3

ZZ ) and trefoil ( 3

5

3

3

ZZ ) terms, particularly in

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RMS of coma-like aberrations (0.58 ± 0.26 µm) which is more than 4 times larger

than the group mean value (0.14 ± 0.10 µm) of the control group. The spherical

aberrations (0.17 ± 0.09 µm), trefoils (0.35 ± 0.22 µm) and total HOA RMS (0.86

± 0.32 µm) in the keratoconic eyes were also significantly larger than those (0.08

± 0.03 µm, 0.12 ± 0.08 µm and 0.30 ± 0.08 µm) found in the normal eyes.

Figure 5.2 Group mean HOA of normal and keratoconic eyes.

The results of DOF measured from the keratoconic eyes are shown in Table 5.2.

Other parameters including the total HOA RMS, RMS of spherical aberrations,

coma terms and trefoils, and parameters calculated from the corneal topography,

including HOA RMS contributed by the anterior corneal surface (CHOA RMS),

cone location (described by Equation 5-6.) and cone volume are also listed in

Table 5.2.

The DOF measured in the keratoconic eyes varied from 0.68 D to 1.30 D, with a

mean value of 0.90 ± 0.21 D, which was significantly larger than the DOF found

in the group of normal subjects (0.73 ± 0.09 D for the non-cycloplegic condition)

(p<0.05). The peak of the keratoconic cones were located at average

1.64 ± 0.18 mm away from the centre of the pupil, in an inferior- temporal

direction. The cone volume ranged from 0.03 to 0.11 mm3 with a mean volume of

0.06 mm3 ± 0.03 mm

3.

108

Table 5.2 Results of keratoconic eyes.

Subject DOF (D)

Ocular wavefront aberration RMS HOA RMS (µm)

Spherical aberration

(µm)

Coma terms (µm)

Trefoils

(µm)

KC1 OS 0.93 1.12 0.17 0.78 0.71 KC1OD 0.68 0.60 0.07 0.33 0.46 KC2 OS 0.70 1.14 0.27 0.89 0.20 KC2 OD 0.79 1.10 0.25 0.80 0.25 KC3 OS 1.30 0.87 0.31 0.65 0.12 KC3 OD 0.77 0.51 0.19 0.31 0.16 KC4 OS 0.85 0.42 0.11 0.20 0.23 KC4 OD 1.24 1.21 0.17 0.81 0.74 KC5 OS 0.94 1.09 0.08 0.67 0.32 KC5 OD 0.87 0.49 0.06 0.32 0.31 Mean ±std 0.90 ±0.21 0.86 ±0.31 0.17 ±0.09 0.58 ±0.26 0.35 ±0.22

Subject Parameters calculated from topography CHOA RMS (µm)

Cone location d

(mm)

Cone volume v (mm

3)

KC1 OS 1.38 1.3095 0.11

KC1OD 0.64 1.7857 0.03

KC2 OS 1.35 1.7595 0.08

KC2 OD 1.33 1.6302 0.06

KC3 OS 1.54 1.3695 0.11

KC3 OD 0.69 1.7857 0.03

KC4 OS 0.78 1.5468 0.03

KC4 OD 1.58 1.5989 0.08

KC5 OS 1.39 1.7283 0.09

KC5 OD 1.10 1.8563 0.03

Mean± std 1.18 ±0.35 1.64 ±0.18 0.06 ±0.03

Correlation analysis was first performed for the pooled data including both the

normal eyes and keratoconic eyes. Since the pooled data was comprised of two

distinct subgroups, simple calculation of Pearson‟s r may give misleading

estimation of the strength of a relationship between two variables, whenever there

are uncertainty about the linearity of a relationship or when there are outliers

(Hotelling and Pabst, 1936; Spearman, 1987). As an alternative, Spearman‟s rank

correlation coefficient rho has been used, which is a Pearson's r correlation,

computed not on the original variables, but on the variables transformed into

rank-orders, to estimate the association. Significant correlation was found

between DOF and HOA RMS (rho=0.47, p<0.05), and a weaker correlation was

found between DOF and SA (rho=0.40, p=0.08).

109

Correlation analysis was also performed across all keratoconic eyes, between the

DOF and ocular wavefront and between DOF and parameters calculated from the

corneal topography. No statistically significant correlation was found between the

DOF and the four ocular wavefront parameters across the 10 tested eyes (for

HOA RMS, spherical aberration, coma and trefoil, r=0.32, 0.30, 0.30 and 0.25,

respectively, and all p>0.1). Significant correlation was found between DOF and

CHOA RMS (r=0.67, p<0.05). Mild correlations were also shown between DOF

and cone volume v and between DOF and cone location d (r=0.60, -0.59 and

p=0.07, 0.08).

5.3.3 Comparison between the left and right eye of keratoconic subjects

Differences in DOF and other parameters between the keratoconic subjects‟ left

and right eyes were calculated and are shown in Table 5.3.

Table 5.3 Comparison between the left and right eye.

Subject

Difference between left and right eye (Ocular wavefront aberration RMS)

∆DOF (D)

∆HOA RMS (µm)

∆Spherical aberrations

(µm)

∆Coma terms (µm)

∆Trefoils

(µm)

KC1 0.25 0.53 0.10 0.45 0.26 KC2 -0.09 -0.01 0.02 0.10 -0.05 KC3 0.53 0.36 0.12 0.34 -0.04 KC4 -0.39 -0.79 -0.06 -0.61 -0.51 KC5 0.07 0.60 0.017 0.35 0.01 Subject

Difference between left and right eye (Parameters calculated from topography)

∆DOF (D)

∆CHOA RMS (µm)

∆Cone location ∆d

(mm)

∆Cone volume ∆v

(mm3)

KC1 0.25 0.74 -0.48 0.08

KC2 -0.09 0.02 0.08 0.02

KC3 0.53 0.75 -0.48 0.08 KC4 -0.39 -0.85 0.32 -0.05

KC5 0.07 0.76 -0.24 0.06

Strong correlation was found between the difference of DOF (∆DOF) in the

subject‟s two eyes and the difference in spherical aberrations (r=0.96, p<0.01).

No significant correlation was found between ∆DOF and ∆HOA RMS, ∆Coma

and ∆Trefoil (r=0.79, 0.83 and 0.71, all p>0.05). Significant correlation was also

110

found between ∆DOF and ∆v (0.92, p= 0.03). ∆DOF and ∆CHOA RMS was

moderately correlated (r=0.87, p=0.05). Correlation between ∆DOF and ∆d was

also found to be not significant (r=-0.77, p=0.13).

5.4 Discussion

In this study, the subjective DOF from 10 keratoconic eyes and from the right

eyes of 10 normal subjects were measured with a two-channel Badal optical

system. The subjective DOF measured in the keratoconic eyes were significantly

larger (about 0.17 D) than those found in the normal subjects. Comparison

measurements of DOF of normal subjects were performed under both conditions

with and without cycloplegia. A very small change was found in the subjects‟

HOA RMS after they had full cycloplegia, which was similar to the results

reported by Jankov II et al. (2006). The difference of subjective DOF measured

by the two-Badal-channel setting with and without cycloplegia was also found to

be negligible, which matched well with the finding of Wang and Ciuffreda (2004),

who used a similar system to measure the DOF in two normal subjects with and

without cycloplegia. For this reason, DOF measurements for the keratoconic

subjects were conducted without their eyes being cyclopleged.

Spearman‟s correlation analysis across all studied eyes revealed strong

correlation between DOF and HOA RMS and a weaker correlation between DOF

and SA. Distortions of the cornea are the main reason for significantly increased

levels of HOA in keratoconus compared to the normal subjects (Madea et al.,

2002). Significant correlation was found between the subjective DOF of

keratoconic eyes and higher order aberrations contributed by the cornea. However,

the association was weaker between the DOF and total ocular HOA RMS in

keratoconus. One possible reason for the weak correlation could be due to the

metrics used in this study, which were metrics of wavefront quality (RMS values),

rather than retinal image quality metrics. They are more general indicators of the

eyes optical quality. This could also be partly due to the crystalline lens‟ potential

to compensate the aberrations produced by the cornea and to thereby reduce the

total ocular aberrations (Artal et al., 2001; Kelly, Mihashi & Howland, 2004;

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Schlegel et al., 2009). Sabesan and Yoon (2010) have also reported some neural

compensation for asymmetric optical blur in keratoconic eyes by comparing the

visual acuity of keratoconic subjects and visual acuity of normal eyes viewing

though the keratoconus wavefront (via adaptive optics). This neural compensation

helped to reduce the impact of irregular astigmatism and improved visual

performance of keratoconic eyes. They found that the magnitude of compensation

increased with the severity of keratoconic aberrations. For this reason, the ocular

wavefront aberration alone may not be a reliable indicator to predict the visual

performance or blur tolerance in keratoconus and hence the DOF. Similar neural

adaption of keratoconic eyes for VA-related visual tasks was also reported by

Rouger et al (2010). The small sample size (5 subjects) may also contribute to the

lack of correlation between the DOF and chosen metrics.

The mean value of total HOA RMS of the keratoconic eyes was approximately

three times larger than the normal eyes. The mean values of spherical aberrations,

coma like aberrations and trefoils in keratoconic eyes were approximately two

times, four times, and three times larger than those in the control group. Spherical

aberration is known to increase the DOF of the eye (Charman & Whitefoot, 1977;

Plakitsi & Charman, 1995; Rocha et al., 2009). However, the dominant HOA

components in keratoconic eyes are asymmetric aberrations including coma and

trefoil and they were not found to significantly influence the DOF in this study.

Rocha et al. (2009) used an adaptive optics system to induce vertical coma and

oblique trefoil in normal eyes and found little effect on the DOF. These results

also matched with the finding of Atchison et al (2009). This could partly explain

why only a modest increase was found in DOF in the studied keratoconic eyes.

Conflicting results were reported by Legras et al (2010), who used contact lenses

that induced different levels of vertical coma and spherical aberration to measure

the through-focus performance of four subjects. They suggested that the effect of

vertical coma had a comparable effect to spherical aberration on the subjective

DOF. However due to the use of contact lens in their experiment, the higher order

aberrations in the subjects eye may change because of lens flexure, tear film

thickness changes or rotation and decentration of the contact lens, which could

induce more uncertainties in the results compared with adaptive optics methods.

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The shape and physical dimensions of the cone can be used as indicators to

estimate the severity of keratoconus (Flynn et al., 2006). The location of the cone

will also influence the corneal and ocular wavefront terms. A cone located more

towards the periphery of the entrance pupil might be expected to produce high

levels of coma, while a cone located near the pupil center will introduce

predominantly spherical aberration. The cone location and its physical

dimensions did have some mild correlations with the subjective DOF in the

keratoconic eyes, with larger and more central cones being associated with

greater levels of DOF.

Since none of the keratoconic subjects involved in this study had any retinal

abnormalities, the two eyes of the same subject could be assumed to have the

same level of retinal function and importantly, the subjective criteria adopted for

“just noticeable blur” should have been identical between eyes (and presumably

less variable than between subjects). Therefore the comparison between the left

and right eyes of each keratoconic subject provides an opportunity to study the

influence of optical factors on the difference of DOF between the two eyes.

Strong correlation was found between the difference of DOF and difference in

spherical aberration between eyes. This is consistent with a number of other

studies showing the effect of spherical aberration on DOF (Charman & Whitefoot,

1977; Plakitsi & Charman, 1995; Rocha et al., 2009).

In conclusion, by using a dual-channel Badal optical system, one can reliably

measure the subjective DOF without cycloplegia. The DOF measured in

keratoconic eyes was significantly larger than that in normal eyes. However there

was not a strong correlation between the large amount of HOA RMS and DOF in

keratoconic eyes. Among all HOA terms, spherical aberration was found to be the

only HOA that helps to significantly increase the DOF in the studied keratoconic

subjects.

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Chapter 6. Design and construction of the adaptive optics

system

6.1 Introduction

In the following chapter, an experiment which aims to measure and modify the

DOF of the human eye has been conducted with the aid of an adaptive optics (AO)

system. This chapter describes the design and construction of this AO system.

6.1.1 Origins and basic theory of AO

Adaptive correction of the wavefront aberrations in the human eye has its origin

in astronomy to solve the problem of star imaging through the turbulent

atmosphere (Hardy, Lefebyre & Koliopoulos, 1977). After the development of

the first Shack-Hartman wavefront sensor for the human eye (Liang et al., 1994),

Williams and Liang (1999) applied AO technology to correct the eye‟s higher

order aberrations (HOA) and showed highly improved contrast sensitivity in

monochromatic light (Williams et al., 2000). By correcting the HOA in the

human eye with AO, the resolution of retinal imaging is greatly improved, which

helps researchers and clinicians to obtain extended information from the living

retina (Hofer et al., 2001; Roorda, Romero & Donnelly, 2002). Adaptive optics

now allows in vivo resolution of a single photoreceptor of the retina, providing

the ability of real-time observation of the living retinal tissue at a microscopic

resolution (Roorda, Romero & Donnelly, 2002). With the aid of AO technology,

researchers and clinicians are now able to perform non-invasive monitoring of

normal retinal function and the progression of retinal disease, and the efficiency

of therapies for treating the disease. The use of an AO system to generate

different wavefront patterns is also used in the novel experiments of Artal et al.

(2001; 2004) and Chen et al. (2007) to study the blur adaptation of the human eye.

The optical layout and working theory of a typical AO system for vision

correction is shown in Figure 6.1.

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Figure 6.1 Schematic concept of a basic AO system for vision science.

An AO system normally consists of three major components: the wavefront

sensor, a computer, and the wavefront corrector. The wavefront sensor measures

the optical aberrations at the eye‟s exit pupil plane. One of the most popular

choices of wavefront sensor available today in vision applications is the

Hartmann-Shack wavefront sensor. The raw wavefront information is then

analysed by the computer to calculate the voltage matrix driving the actuators or

the liquid-crystal light modulator on the wavefront corrector to compensate the

incoming wavefront. The wavefront corrector (a deformable mirror or a liquid

crystal spatial light modulator) alters the phase profile of the incoming wavefront

by changing the physical optical path length that the wave propagates. The AO

system shown in Figure 6.1 runs a closed-loop correction. According to the real-

time feedback from the wavefront sensor, the computer adjusts the output voltage

to the actuators. The closed-loop correction usually stops when the residual

wavefront aberration RMS is lower than a pre-determined value.

6.1.2 Reviewed designs of AO systems

During designing of the AO system for my PhD research study, a range of

designs of different AO systems applied to human vision have been reviewed

(Liang, Williams & Miller, 1997; Vargas-Martin, Prieto & Artal, 1998;

Fernández, Iglesias & Artal, 2001; Hampson et al., 2005; Fernández et al., 2006;

Hampson et al., 2006; Hofer et al., 2006; Lundström et al., 2007). After careful

analysis of the optical layout, operation procedures, and functions of each system,

115

four designs were chosen as the main references. They are the first generation

Rochester AO system (Liang, Williams & Miller, 1997), the second generation

AO ophthalmoscope of the Rochester University (Hofer et al., 2006), the

modified Murcia AO system ( Fernández, Iglesias & Artal, 2001) and the KTH

AO system described in Lundström et al. (2007)‟s study on peripheral vision

performance.

Figure 6.2 The first generation Rochester AO system (Liang, Williams & Miller,

1997).

The first generation Rochester AO system was designed for improving vision and

the resolution of retinal images. The system is shown in Figure 6.2. When the

system is set to measure and correct the ocular aberrations, a collimated laser

beam is used to create a point source on the retina of a living eye. The light

reflected from the retina forms a distorted wavefront at the pupil plane, which is

recreated at the plane of the deformable mirror by a telescope structure consisting

of two focus lenses. The magnifying ratio of the telescope is matched depending

on the ratio of the pupil size and working surface area of the deformable mirror.

The wavefront that propagates through a second telescope is received by a lenslet

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array and the formed images are captured by CCD1. The raw spots image is then

acquired by a computer (not shown in the figure), which calculates the wavefront

and sends out a control signal to the deformable mirror to compensate the incident

wavefront from the eye. After the RMS of the observed ocular wavefront in

CCD1 is corrected to a certain level, the surface state of the deformable mirror is

frozen. The procedure of acquisition of high resolution retinal images can then be

started. The flash lamp delivers a 4 millisecond flash to illuminate a small area of

the retina. Its image is captured by CCD2. On the same position of CCD2, one can

also place a visual stimulus to perform desired visual tests.

The optical structure of the first generation Rochester AO system is simple and

efficient for its application. The same layout is adopted in the systems of a

number of other groups (Fernández, Iglesias & Artal, 2001). However, the

disadvantages of the system are also obvious. First, to form a point source onto

the retina of the eye, because there is no defocus correcting function built in the

system, the subject‟s eye and the first focal lens from the eye need to move

forward or backward together to find out the proper position, if the subject is not

wearing a corrective lens. It makes a bite bar necessary for stabilization of the

subject. Moreover, it could be difficult to accommodate the two full-length

telescope structures on a small size optical board. Due to the tilted angle of the

deformable mirror (normally 8 to 12 degrees), the non-standard orientations of

the two arms containing the Laser and CCD2 may also cause problems of

mounting the components.

Major changes have been made in the second generation AO ophthalmoscope of

the Rochester University. The different parts to the first generation system are

shown in the dash box in Figure 6.3.

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Figure 6.3 Changes of optical layout in the second generation Rochester AO

system (Hofer et al., 2006)

The original 37-channel deformable mirror is updated to a 97-channel deformable

mirror (Xinetics, Inc.), which provides more actuators across the pupil to achieve

better correction of HOA. A pair of off-axis parabolic mirrors is used to replace

the two full-length telescopes, which help to simplify the optical path and will not

induce chromatic aberrations. Although the use of off-axis parabolic mirrors

allows the system‟s optical path to be folded, the large diameter of the 97-channel

DM still requires a very long path to magnify the eye‟s pupil to fill the entire

working surface of the mirror. The whole system needs to be assembled on an

oversized optical board approximately 2 meters long. The mechanism of defocus

correction is still not integrated in this system, which means the subject needs to

move with the first lens in front of the eye to compensate the possible defocus

before the experiment begins.

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Based on the design of the first generation Rochester AO system, Fernández,

Iglesias and Artal (2001) introduced a very useful feature to the Murcia AO

system, which allows correction of defocus without moving the subject‟s eye.

Figure 6.4 Badal stage used in Murcia AO system ( Fernández, Iglesias & Artal,

2001)

As shown in Figure 6.4, four front surface mirrors (M1 to M4) and two focal

lenses (L1 and L2) are used to form a Badal system. M3 and M4 are mounted on

a translation stage. The optical path length between lenses L1 and L2 can then be

changed by moving the translation stage, to alter the defocus presented to the

subject‟s eye.

Another important reference for designing the AO system in this research study is

the KTH AO system described by Lundström et al. (2007). Among all the steps in

the building process of an optical system, alignment is the most time consuming

task. As shown in Figure 6.5, major components of the KTH system except the

deformable mirror are all located on a straight line on the common optical path,

which provides great convenience for alignment of the system. Before insertion

of the two mirrors delivering the wavefront to the deformable mirror, one can

align the other components on the main optical path on a straight line relatively

easily. The deformable mirror is added into the system at the last stage of

alignment.

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Figure 6.5 Schematic diagram of the KTH AO system ( Lundström et al., 2007)

6.2 Design and modification of the AO system

After an extensive review of the working principles and designs of other

published AO systems, an AO system was designed to perform the proposed

experimental studies of DOF. Some of the planned uses include: (i) nullify the

total aberrations of the eye, (ii) nullify the existing aberrations in an eye and

induce particular types of aberration (e.g., primary and secondary SA) and control

its amplitude, and (iii) induce simulations of contact lens optical designs (within

the limits of the deformable mirror) and test vision performance.

The AO system was built using the components provided by Imagine-Eyes

(Orsay, France), including the HASO32TM

Hartman-Shack wavefront sensor, a

Mirao52TM

deformable mirror (DM), an electronic mirror control unit, and the

CASAOTM

V3.0 closed-loop software. The Mirao52TM

contains 52 actuators. The

actuators are distributed in an 8 8 format with three missing at each corner,

forming a round-shape working surface with a diameter about 15 mm. The

wavefront sensor consists of 1280 lenslets distributed in 40 32 format over a

4.5 3.6 mm2 aperture.

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During the construction of the AO system, different optical layouts were

investigated. Considerations were not only made on how to achieve the designed

functions, but also other important factors. First, the whole system was to be

assembled on a standard optical board with a size of 110 cm in length and 50 cm

in width. The location of each component was to be planned before being

mounted. Second, the optical structure of the system was designed in such a way

that makes future update and maintenance relatively easy, allowing quick

diagnosis of any alignment problems, and providing the possibility of quick

system recovery. Third, the system was designed to be both user friendly and

subject friendly to reduce the operational difficulty for users and discomfort for

subjects.

Figure 6.6 Schematic diagram of the first design of the AO system.

The schematic diagram of an early design for the system is shown in Figure 6.6.

Based on the design of the first generation Rochester AO system, it had the same

disadvantages of the system as described in section 6.1.2. After studying the

modified Murcia AO system and the KTH AO system, a second design similar to

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the KTH system was trialed on the optical board. However, due to the limit of

physical size of the optical board, and different magnification requirements, the

setup was not successful.

The final system diagram of the AO system is shown in Figure 6.7. The system

consists of four main channels: illumination and reference channel, radiation

channel, wavefront operation channel and visual stimulus channel. A laser diode

(Edmund Optics, 785 nm) is used in the radiation channel to create a collimated

laser beam with a diameter of 1 mm. Part of the laser beam is reflected by a

coated pellicle beam splitter (PBS1: 67% transmission) to go through lens L2, the

Badal subsystem, lens L1 and to form a point source on the eye‟s retina. The

transit beam through PBS1 is blocked by a light trap (LT1). The energy level that

reaches the eye is controlled by the density filter in the radiation channel. A

measured radiant value of 25 µW was obtained at the cornea, which is 30 times

lower than the Australia/New Zealand laser safety standard for continuous

viewing (AS/NZS 2211.1:2004).

Reflected light from the retina forms a distorted wavefront at the pupil plane,

which is measured and corrected by the wavefront channel. The wavefront at the

pupil plane is reproduced by a pair of relay lenses (L1 and L2) at the surface of

Mirao52 deformable mirror. A second relay lens pair (L3 and L4) images the

wavefront to the lenslet array of HASO32 Hartmann-Shack wavefront sensor.

The Badal subsystem between L1 and L2 is used to alter the optical path length

for defocus correction and focus the collimated laser beam into a fine spot on the

retina.

The visual stimulus channel is split from the wavefront channel by a cold mirror

(CM2). Two customized targets described in Chapter 4 and Chapter 5 have been

used in the system for specific experiments. The visual stimuli is also provided by

an eMagin OLED microdisplay (eMagin, Inc., WA), which displays the visual

test from a laptop computer at an 800 600 pixel resolution. A fixed target align

with the system‟s optical axis is used for quick alignment of the subject eye.

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Figure 6.7 Optical layout of the developed AO system.

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6.3 Calibration and evaluation of the system performance

Before performing experiments with the AO system, it was important to calibrate

and evaluate the performance of the system. In this section, the calibration and

evaluation of performance of the HASO32TM

wavefront sensor, Mirao52TM

deformable mirror and examples of closed loop correction with the AO system

will be discussed.

6.3.1 Elimination of the effect of laser speckle and corneal reflection

Since a 785 nm laser diode (a coherent light source) is used in the radiation

channel to illuminate the eye, the laser speckle (Dainty, 1984) becomes a problem

when the collimated laser beam is illuminating the static retinal surface of a

model eye, which is used to align and calibrate the system. A Hartmann-Shack

grid pattern affected by speckle showing uneven illumination intensity is shown

in Figure 6.8a. When the unevenly illuminated spot pattern is used to calculate

the wavefront, it may produce error from the actual wavefront of the eye. To

solve this problem, a vibrating mirror was placed in the optical path, shown in

Figure 6.7 as VM, to produce random-directional high frequency vibrations

before the laser beam is delivered to the eye. The dynamic vibrations

(300 Hz~700 Hz) alter the illumination spot location on the artificial retina and

help to effectively reduce the phenomena of laser speckle (as shown in Figure

6.8b). To avoid unnecessary corneal reflections in Hartmann-Shack spot images,

an off-axis entry beam was also used when delivering the laser beam into the eye

(Williams & Yoon, 2001).

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Figure 6.8 Hartmann-Shack spot images with the vibrating mirror (a) off, and (b)

on

6.3.2 Calibration of the wavefront measuring function with HASO32TM

wavefront sensor

A model eye with -5.6 D of defocus, -0.5 D of astigmatism and a small amount of

coma (0.2 µm) has been used in the first stage of calibration of the system‟s

wavefront sensing function. Then the system‟s wavefront measuring function was

calibrated and benchmarked against a Complete Ophthalmic Analysis System

(COASTM

, Wavefront Science, Inc), which is commercially available and widely

used clinical research (Cheng et al, 2003a). Wavefront measurements were taken

from the left eyes of 10 normal subjects with both systems (COAS and HASO) in

the same lighting condition, and the order of use of the instruments was

randomized. Data were analyzed for a 6 mm pupil for both instruments. Major

differences of the instruments specifications are listed in Table 6.1.

Table 6.1 Major differences of the COAS and HASO32 wavefront sensor.

COAS HASO

Working wavelength λ 840 nm 785 nm

Number of lenslets 1407 992

Distance between lenslets

144 µm 114 µm

CCD resolution 752 by 480 644 by 492

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Since the defocus of the subject was nullified by a Badal optical system when

wavefront measurements were performed with the AO system, the defocus

(Zernike term 0

2Z ) was not considered in the comparison. The mean results of

measurement of astigmatism and HOAs obtained by the two instruments are

shown in Figure 6.9.

Figure 6.9 Measurement results of HOAs by COAS and HASO32

for a 6 mm

pupil.

The mean HOA RMS was 0.1372 ±0.0356 µm and 0.1525 ±0.0421 µm for the

COAS

and HASO32, respectively. There were small variations between

wavefront measurements performed by COAS and HASO32 in each individual

eye. In general, HASO32 showed about 10% higher values of HOA RMS as

compared to the COAS. All HOA coefficients showed high correlations, except

the trefoil ( 3

3

Z ) and tetrafoil ( 4

4Z ), as shown in Table 6.2.

Table 6.2 Correlation of Zernike HOA coefficients measured by COAS and

HASO in a 6 mm pupil.

Coeff 2

2

Z 2

2Z 1

3

Z 1

3Z 3

3

Z 3

3Z 2

4

Z 2

4Z 0

4Z 4

4Z 4

4

Z

R^2 0.64 0.92 0.72 0.65 0.02 0.79 0.86 0.62 0.26 0.61 0.04

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Examples of the wavefront aberration measurements from two representative

subjects are shown in Figure 6.10, in which similar HOA structures can be

observed.

(a)

(b)

Figure 6.10 Comparison of wavefront aberrations measured by COAS and

HASO32 from two subjects in a 6 mm pupil.

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Wavefront measurement results of all 10 subjects in a 6 mm pupil with the two

instruments have been presented in Appendix A.

6.3.3 Calibration of the wavefront generating function with the

Mirao52TM

deformable mirror

The performance of generating individual Zernike wavefront coefficients with the

Mirao52 deformable mirror (DM) has been investigated by Fernández et al (2006)

and Sabesan, Ahmad and Yoon (2007). The official user‟s manual provided by

ImagineEye claims that the Mirao52 DM is able to reliably generate individual

wavefront coefficients (amplitude limited by the maximum stroke of DM) up to

the 4th

Zernike order. In the work of Fernández et al (2006), wavefront

aberrations up to the 5th

Zernike radial order were generated and evaluated with

the Mirao52 DM. Sabesan, Ahmad and Yoon (2007) further evaluated the

system‟s ability to generate wavefront aberrations up to the 6th

Zernike radial

order (for secondary spherical aberration only). The maximum amount of

secondary spherical aberration that can be stably generated by the DM in a 6 mm

pupil was found to be approximately 0.2 µm.

Using the same procedure suggested by Fernández et al (2006), the DM‟s ability

to generate individual higher order Zernike wavefront coefficients up to the 5th

radial order, and the secondary spherical aberration ( 0

6Z ) was evaluated. An

increment of 0.1 µm was used to measure the maximum possible range before the

voltage limit of ±0.5 V was reached. This voltage limit setting was based on the

manufacturer‟s suggestion to prevent the device being exposed to a large absolute

voltage, which may damage the DM permanently. The calibration results for

generating selected HOA terms from the 3rd

to 5th

Zernike radial order and 0

6Z are

shown in Figure 6.11. R denotes the amplitude of the specific wavefront

coefficient, which can be reliably generated by the Mirao52 DM without causing

significant increase (≤ 0.05 µm) of residual aberrations. E represents the error

between the expected coefficient, which is set to be generated in the control

software and the actually measured HOA RMS. For HOAs from the 3rd

to 4th

Zernike order, E values were obtained when 1.0 µm of the specific term was

128

programmed. For the 5th

order coefficients and 0

6Z , the error was calculated at the

maximum amplitudes.

Figure 6.11 Selected Zernike polynomials generated by the Mirao52 DM

measured by the HASO32 wavefront sensor. R is the amplitude of the Zernike

coefficient, which can be reliably generated, and E presents the error.

A quick procedure to validate the wavefront generation function of the mirror

without the use of a collimated broad laser beam can be performed as follows: 1)

Place a model eye with its 6 mm pupil at the back focal point of L1 and align it

with the the system‟s optical axis; 2) Measure the wavefront aberration, and save

the current wavefront as the reference file and subtract the reference wavefront

from the HASO measurement result. A perfect null surface with less than

0.001 µm of wavefront RMS can then be obtained. 3) The user can then generate

different Zernike mode using the procedure suggested by Fernández et al (2006)

and observe the stability and linearity of the result.

129

In an earlier theoretical study described in Chapter 3, it was found that the

interaction between primary and secondary spherical aberrations ( 0

4Z and 0

6Z )

may have potential advantages to extend the DOF in the human eye. Therefore,

the performance of the AO system to generate wavefront combinations of 0

4Z

and 0

6Z was also investigated. The following conditions have been considered: (i)

generation of 0

4Z alone, (ii) 0

6Z alone, (iii) fixed 0

4Z with variable levels of 0

6Z , and

(iv) fixed 0

6Z with variable levels of 0

4Z .

(a)

(b)

Figure 6.12 Generation of pure (a) 0

4Z , and (b) 0

6Z with the AO system.

130

(a)

(b)

Figure 6.13 Generation of combinations of 0

4Z and 0

6Z with the AO system.

Great linearity was observed when the system was used to generate 0

4Z and 0

6Z

alone, as shown in Figure 6.12. Different combinations of 0

4Z and 0

6Z can also be

generated using the AO system. Some examples are shown in Figure 6.13.

Although the generations of 0

4Z and 0

6Z are relatively independent, limited by the

actuator stroke, more combinations can be generated for 0

4Z and 0

6Z with the

opposite signs. The combinations which can be reliably (the conditions that no

131

actuator showed a voltage higher than 0.5 V and a level of residual HOAs of less

than 0.05 µm was induced) generated by the AO system are listed in Table 6.3.

Table 6.3 Combinations of 0

4Z and 0

6Z can be generated using the AO system.

“Y” indicates that the combination can be reliably generated.

6.3.4 Closed-loop correction with the AO system

After calibrating and evaluating the performance of HASO32 and Mirao52

separately, the system‟s performance of closed-loop wavefront correction

utilizing the two major components was investigated.

Experiments were performed with a myopic model eye with a 6 mm pupil size.

An example of closed-loop correction on the model eye is shown in Figure 6.14.

The model eye was mounted in front of the AO system with its exit pupil located

on the back focal point of L1, as shown in Figure 6.6. A random misalignment

was induced between the optical axis of the model eye and the AO system to

create certain amount of residual aberrations including mainly astigmatism and

coma, as seen in Figure 6.14a. After the closed-loop correction, a much lower

amount of residual aberrations were observed (as shown in Figure 6.14b). The

RMS of all residual HOA terms were controlled to be under 0.02 µm or lower,

except the trefoil term, which showed an RMS value of 0.03 µm.

The system‟s performance to correct aberrations in real eyes was also tested. An

example of the closed-loop correction of a real eye is shown in Figure 6.15. The

subject‟s pupil was dilated with 2 drops of phenylephrine 1%, while the

132

accommodation of the eye remained active. The correction was also performed in

a 6 mm pupil. The residual wavefront RMS after correction was under 0.05 µm.

Multiple corrections on the model eye were achieved by altering the state of

misalignment to generate different amounts and orientations of astigmatism and

HOAs. Experiments were also repeated in real eyes of different subjects. Under

good alignment condition, closed-loop corrections on a model eye could always

reduce the wavefront RMS of residual HOAs to the level of 0.02~0.03 µm. A

higher level of residual HOA RMS is expected in real eyes due to the movement

of the human eye and microfluctuations of the wavefront aberrations. The AO

system was able to reduce the wavefront RMS of real eyes to approximately

0.05~0.07 µm, which represents 10%~20% of the RMS of total HOAs in normal

human eyes (Wang & Koch, 2003; Salmon & van de Pol, 2006). Using the

developed AO system, an experiment for extending DOF in human eyes with

optimized wavefront aberrations was performed and is described in Chapter 7.

133

Figure 6.14 Wavefront aberrations measured from a misaligned myopic model eye (a) with the AO off, and (b) with the AO on.

134

Figure 6.15 Wavefront aberrations measured from a real eye (a) with the AO off, and (b) with the AO on.

135

Chapter 7. Expanding depth of focus in the human eye

through optimal combinations of primary and secondary

spherical aberration

7.1 Introduction

It is known that the DOF in human eye can be affected by the HOAs. The

structure of HOA in the human eye is not static. Studies of wavefront aberrations

during accommodation have revealed significant changes in HOA of young eyes

under different accommodation levels (Atchison et al., 1995; He, Burns &

Marcos, 2000; Ninimiya et al., 2002; Cheng at al., 2004). These changes

dynamically alter the structure of HOA of the eye and affect most noticeably the

Zernike coefficient terms of primary, 0

4Z , spherical aberration (Ninomiya et al.,

2002; Cheng et al., 2004; Roorda & Glasser, 2004). Ninomiya et al. (2002)

compared the monochromatic wavefront aberrations of young adults measured

with far viewing (0 D) and at a 3.0 D accommodative level. They found

significant changes of both 0

4Z and 0

6Z (in a 6 mm pupil) during accommodation.

In the study of Cheng et al. (2004), the wavefront aberrations in a large young

adult population were studied for accommodative stimuli up to 6.0 D. The authors

reported a significant negative shift of 0

4Z as the accommodative level increased,

while the 0

6Z showed a trend (not significant) towards more positive values.

Roorda and Glasser (2004) studied the wavefront aberrations of an isolated

porcine crystalline lens with a laser ray trace scanning technique. In their

experiment, the most noticeable changes with accommodation were observed for

0

4Z , which became more negative, and 0

6Z , which progressed from negative to

positive with accommodation. Although many studies have investigated the DOF

of the human eye under relaxed or cyclopleged accommodation conditions, to the

best of my knowledge, there has not been a study on the effect of combinations of

HOA such as 0

4Z and 0

6Z , similar to those occurring during accommodation.

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Some recent studies have investigated the effect of combinations of 0

4Z and 0

6Z on

the eye‟s DOF. Using an adaptive optics system, Benard et al (2010) investigated

the effect of pure 0

4Z , 0

6Z and some combinations of 0

4Z and 0

6Z on the DOF of 5

subjects.

In this study, we aimed to investigate the effect of primary spherical aberration,

secondary spherical aberration and their various combinations on DOF by using

an adaptive optics system. The optimal combinations of these aberrations that

would extend the DOF of the human eye were derived. The chapter is organized

as follows. Firstly, the effects of 0

4Z , 0

6Z and their combinations on the DOF of an

otherwise unaberrated diffraction-limited model eye are investigated using a

through-focus simulation algorithm, and optimal combinations of 0

4Z and 0

6Z are

estimated. To evaluate the effect of those spherical aberrations in the presence of

other naturally occurring higher order aberrations, the through-focus simulation

algorithm was applied to a group of 100 “virtual eyes” generated using the

algorithm from Thibos et al (2002a). Finally, the effect of those combinations of

0

4Z and 0

6Z on the DOF of real eyes is investigated through the use of an AO

system.

7.2 Methods

7.2.1 Extending the DOF in a model eye

To understand the effect of primary and secondary spherical aberration on the

through-focus performance of the eye and to estimate a set of optimal

combinations for extending the DOF in an experiment with the AO system

described later, the DOF was first studied in an unaberrated diffraction-limited

eye model and in 100 virtual eyes generated by the statistical model developed by

Thibos et al. (2002a) based on wavefront aberrations measured from 200 normal

eyes (Thibos et al., 2002b).

A dedicated simulation program was written from first principles in MATLAB

(The MathWorks, Inc., Natick, MA) to theoretically apply a number of possible

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combinations of 0

4Z and 0

6Z to a model eye and to calculate the DOF based on an

image quality metric (IQM). The algorithm of the through-focus calculation

(Steps 1 to 7) was presented in detail in Chapter 4. Here the algorithm is extended

to include secondary spherical aberration.

The flow chart of the simulation program is shown in Figure 7.1(a) and an

example of the simulation output is shown in Figure 7.1(b). The introduction of

different levels of 0

4Z and 0

6Z may change the characteristics of the subject‟s

though-focus IQM and therefore affect the predicted DOF. It can be seen in

Figure 7.1(b) the predicted DOF of the same subject increased after the induction

of additional primary spherical aberration (marked in red as “Modified DOF”). A

shift of centre of focus (COF) could also occur due to the interaction of defocus

and induced HOA.

Through-focus algorithm to calculate the DOF of a model eye

In the algorithm, DOF is theoretically defined as the range of defocus error which

degrades the retinal image quality to a certain level of the maximum possible

value. The visual Strehl ratio based on the optical transfer function (VSOTF) was

chosen to estimate the retinal image quality, since it is currently considered as one

of the best descriptors of visual performance that can be directly derived from

wavefront aberrations (Marsack, Thibos, & Applegate, 2004). It was also reported

as a retinal image quality metric that correlated well with the through-focus visual

acuity (VA) defined in logMAR in healthy eyes (Cheng, Bradley & Thibos, 2004).

Here the augmented version of VSOTF (Iskander, 2006) was used, which is

defined as

yxyxDLyxN

yxyxyxN

dfdfffOTFffCSF

dfdfffOTFffCSFVSOTF

,,(

,Re, (7-1)

where yxDL ffOTF , denotes the diffraction limited optical transfer function,

yxN ffCSF , is the neural contrast sensitivity function, and yx ff , are the

spatial frequency coordinates. Here the VSOTF was based on calculated optical

138

transfer function across all spatial frequencies up to 60 cycles per degree

(Iskander, 2006).

Figure 7.1 (a) A flow chart of the through-focus simulation algorithm to

theoretically estimate the DOF with different combinations of 0

4Z and 0

6Z

Zernike polynomials terms. (b) An example of the output of the through-focus

simulation.

Image quality threshold

It is important for the human eye to maintain an acceptable level of retinal image

quality after any potential extension of DOF. However, in a linear optical system,

the extension of DOF always comes at the price of lower image quality setting up

139

a compromise between image quality (calculated by an IQM such as VSOTF, for

example) and the potential increase in DOF.

In an earlier study conducted by Plakitsi and Charman (1995), the authors chose a

visual acuity (VA) level of 0.3 logMAR to define the DOF, which was treated as

an adequate standard of distant vision for driving. For daily activities, involving

near work and visually intensive tasks, such as reading, a modest level of VA loss

will also lead to significant loss of performance. In a study of visual acuity and

contrast sensitivity including 2520 older subjects, West et al (2002) found that

about 50% of the studied population with visual acuity worse than 0.2 logMAR

had a difficulty of reading (only able to read fewer than 90 words per minute).

Using a method similar to Plakitsi and Charman (1995), Collins and coauthors

(2002) adopted the level of 0.2 logMAR VA to measure the “absolute” DOF for a

group of young adult subjects wearing contact lenses. The “absolute” DOF was

defined as the range of defocus over which the VA is within the 0.2 logMAR of

the subject‟s best possible acuity. Therefore an absolute VA level of 0.2 logMAR

was adopted as a preset image quality threshold, which should be maintained,

after DOF of the eye is extended. In the through-focus algorithm, the 0.2 logMAR

level corresponds to VSOTF of approximately 0.12 (see Figure 7.1b) based on

estimates from the results obtained by Cheng, Bradley and Thibos (2004). The

theoretical DOF can be then estimated as the range of defocus error (positive and

negative) that degrades the through-focus VSOTF value to 0.12 under the

influence of various combinations of 0

4Z and 0

6Z . While the 0.2 logMAR

(VSOTF = 0.12) criterion has been adopted for all through-focus simulations in

this study, the same methods can be used for any chosen value of logMAR or

VSOTF.

Estimation of the optimal levels of 0

4Z and 0

6Z combination

The influence of different levels of 0

4Z and 0

6Z on the DOF of the diffraction-

limited model eye are shown in Figure 7.2, derived from the through-focus

algorithm illustrated in Figure 7.1. The 0

4Z ranged from 0.8 m to 0.8 m in

0.1 m steps (17 levels), and the 0

6Z , ranged from 0.25 m to 0.25 m in

0.05 m steps (11 levels), DOF is defined as the difference between the DOF

140

achieved for a particular non-zero combination of 0

4Z and 0

6Z and the DOF for

0

4Z = 0 and 0

6Z = 0. Higher levels of spherical aberration than those shown in

Figure 7.2 were not considered, since they decreased the image quality metric

below the assumed level of 0.2 logMAR (VSOTF < 0.12). Figures 7.2a and 7.2b

show the two dimensional “slices” from Figure 7.2c and represent the DOF at

zero- 0

6Z and zero- 0

4Z levels, respectively. The empty spaces in Figure 7.2(c)

show the conditions (ie. combinations of 0

6Z and 0

4Z ) in which a decrease of the

predicted DOF was calculated.

The maximum VSOTF value only occurs when 0

4Z and 0

6Z are both zero. It is

evident that combinations of 0

4Z and 0

6Z with opposite sign can significantly

extend the DOF of the model eye, within the constraints of not reducing VSOTF

below 0.12 (i.e., equivalent to 0.2 logMAR loss). On the other hand, introducing

0

4Z and 0

6Z of the same sign is not as effective at extending DOF. For example, if

we take 0.2 microns of 0

4Z and 0

6Z with opposite signs, we find a predicted DOF

of 2.2 D (Figure 7.2c). Whereas if we take 0.2 microns of 0

4Z and 0

6Z with the

same sign, we find a predicted DOF of 1.5 D (Figure 7.2c).

To further reduce the number of possible combinations of 0

4Z and 0

6Z , from the

total of 17 × 11 = 187, radial samples of the DOF matrix (Figure 7.2) starting

from the 0

4Z = 0 and 0

6Z = 0 were considered, until DOF showed a decrease.

This procedure reduced the number of candidate combinations to 41.

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Figure 7.2 The effect of primary and secondary spherical aberrations on the DOF

of a diffraction-limited model eye.

7.2.2 Extending the DOF in virtual eyes

In the previous section, the effect of 0

4Z , 0

6Z and their combinations on the

extension of DOF of a diffraction limited model eye was considered. However, it

is also important to establish the interaction between varying levels of 0

4Z and 0

6Z

and naturally occurring symmetrical and asymmetrical HOAs. To evaluate this

interaction, 100 virtual eyes were generated using the statistical model developed

by Thibos et al. (2002a), which is based on wavefront aberrations measured from

200 normal eyes (Thibos et al., 2002b). Then the previously derived 41 wavefront

142

combinations (Section 2.1) were applied to these 100 virtual eyes using the

through-focus algorithm.

The average value of total HOA RMS, primary and secondary spherical

aberration of the virtual eye group of a 6.0 mm pupil size were 0.302 ±0.093 µm,

0.106 ±0.098 µm and 0.003 ±0.019 µm, respectively. The range of HOA RMS

and 0

4Z values in this group of virtual eyes from Thibos et al (2002 a,b) matched

closely to the levels of HOAs from large populations reported by Porter et al.

(2001) and Wang and Koch (2003).

The average predicted increase in DOF in the 100 virtual eyes caused by the

addition of the 41 various combinations of 0

4Z and 0

6Z is shown in Table 7.1.

Note that a positive change indicates an increase in DOF and a negative change

indicates a decrease in DOF, with respect to the original group mean DOF when

the additional 0

4Z and 0

6Z are set to be zero (i.e. the centre value of the table).

143

Table 7.1 Mean predicted change in DOF (D) of up to 100 virtual eyes by the

addition of the 41 various combinations of 0

4Z and 0

6Z .

When primary spherical aberration 0

4Z alone is added to the virtual eyes, the DOF

increases by up to about 1 D for 0.3 µm of positive or negative 0

4Z . For secondary

spherical aberration ( 0

6Z ) alone, the addition of positive or negative 0.1 µm,

extends the DOF by about 0.4 D. Not surprisingly, it was also noticed that

introducing larger amounts of spherical aberration 0

4Z and 0

6Z reduced the number

of virtual eyes in which the 0.2 logMAR (VSOTF > 0.12) image quality threshold

was satisfied.

For low amounts of 0

4Z combined with 0

6Z there was a slight increase in DOF.

For example, an increase in DOF of about 0.4 D was observed with combinations

of 0.1 µm of 0

4Z and 0.05 µm of 0

6Z of opposite coefficient signs. The use of

higher amounts of 0

4Z combined with 0

6Z in the simulation reduced the mean

DOF in the 100 virtual eyes.

7.2.3 Measurement of DOF in real eyes

After investigating the effect of different combinations of 0

4Z and 0

6Z on DOF

with a diffraction limited model eye and 100 generated virtual eyes, these 41 pre-

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determined wavefront combinations of 0

4Z and 0

6Z were then applied to a group

of human eyes using an adaptive optics system and measured the effect on DOF.

Subjects

Six students (3 males and 3 females) from the School of Optometry, Queensland

University of Technology participated in this study. The mean age of the subjects

was 29, ranging from 26 to 33 years. The group had a mean spherical equivalent

refraction error of –1.0 ±2.0 D, (ranging from 5.0 to 0 D) and a mean cylindrical

refraction of 0.21 ±0.25 D (ranging from 0.5 to 0 D) in the tested eyes. All

subjects had good ocular health with best-corrected Snellen visual acuity of at

least 6/6 in the tested eye. The value of higher order ocular aberrations measured

by a Complete Ophthalmic Analysis System (COAS, Wavefront Science Inc.)

from the left eye of the six subjects in a 6 mm pupil diameter are shown in Table

7.2. For each subject, a series of 4 x 30 dynamic wavefront measurements were

acquired at the sampling rate of about 10 Hz. The average wavefront aberration

was then calculated for each of the subjects. Analysis of the wavefront

aberrations was conducted up to the 6th radial order using two radial orders lower

than the original wavefront fit (Neal, Baer & Topa, 2005). The RMS of total

HOA from the six eyes was 0.37 ±0.10 µm for a 6 mm pupil. The mean value of

0

4Z was 0.13 ±0.09 µm, which was more than 10 times larger than the mean value

of 0

6Z at 0.01 ±0.01 µm.

The study followed the requirements of the Queensland University of Technology

human ethics committee and was conducted in accordance with the Declaration

of Helsinki. Informed consent was obtained from all subjects who participated in

the study (Appendix C).

145

Table 7.2 Higher order ocular aberrations of the six measured eyes for a 6 mm

pupil.

Subjects Total HOA (µm) 0

4Z (µm) 0

6Z (µm)

Subject 1 0.31 0.09 0.01

Subject 2 0.37 0.18 0.00

Subject 3 0.38 0.05 -0.01

Subject 4 0.22 0.04 0.00

Subject 5 0.432 0.11 0.02

Subject 6 0.523 0.28 0.02

Mean±Std 0.37 ±0.10 0.13 ±0.09 0.01 ±0.01

Apparatus

A customized AO system was constructed for the experiment (described in details

in Chapter 6). The AO system was capable of measuring and changing the

wavefront aberration of the eye and of measuring the DOF under the influence of

different combinations of HOA. The system was built based on two major

components: the HASO32TM

Hartmann Shack wavefront sensor and the

Mirao52TM

deformable mirror (both from Imagine Eyes, Orsay, France). In a pilot

study, the HASO32TM

wavefront sensor was calibrated and benchmarked against

a Complete Ophthalmic Analysis System (COASTM

, Wavefront Science, Inc) and

showed high correlation and good repeatability. Performance of the Mirao52TM

deformable mirror to generate single wavefront mode up to the 5th and 6th

Zernike radial order was earlier evaluated by Fernández et al (2006) and Sabesan,

Ahmad and Yoon (2007). In the pilot study (Chapter 6), the mirror‟s capability

of generating combinations of primary and secondary spherical aberration was

investigated. Good correlation was observed between the predicted and generated

wavefront and the generation of 0

4Z and 0

6Z was found to be independent to each

other. However, limited by actuator stroke, more wavefront combinations can be

146

generated when 0

4Z and 0

6Z coefficients have different signs rather than when

they have the same sign.

Figure 7.3 Optical layout of the AO system

The optical layout of the AO system is shown in Figure 7.3. The system optically

conjugates the exit pupil plane of the subject with the surface of deformable

mirror and the Hartmann Shack wavefront sensor. The fixation target consists of

a Bailey-Lovie letter chart printed on a sheet of clear plastic. Two different letter

charts were used to measure the subject‟s visual acuity to reduce learning effects.

A distant white LED light source was used to back illuminate the target through a

diffuser. The target‟s contrast was 80% with an overall luminance of

approximately 120 cd/m2. The letter size on the chart was scaled to provide a

range of visual angles from 20 min of arc (0.6 logMAR detail, the top line of

chart) to 2.5 min of arc (0.3 logMAR detail, the bottom line of chart) when

viewed through the AO system optics.

Protocol

In this study, the criterion of “objectionable blur” (Atchison et al., 2005) was used

for the subjective DOF measurement instead of the “just noticeable blur” used in

study 2. This was done since large amounts of spherical aberration were induced

to the subject‟s eye and the “clearest” image for the subject was already blurred

(compared to the image without additional HOAs). The DOF defined by the

147

“objectionable blur” can also be considered to be closer to the final acceptance of

a multifocal optic (simultaneous vision) by a presbyopic patient. Therefore, the

use of “objectionable blur” for the 0.2 logMAR line was more suitable for this

experiment instead of the “just noticeable blur” criterion used in studies described

in previous Chapters.

All subjects were experienced with visual psychophysics experiments requiring

viewing of targets through a Badal optical system. To allow all subjects to

become familiar with the task of recognizing the “objectionable blur” level, each

of them was given a short training on the AO system with different levels of

induced defocus. Following this, the subject‟s tested eye was cyclopleged and

dilated by 2 drops of Cyclopentolate HCL (1% Minims, 0.5 ml, Bausch & Lomb

Australia). The measurements started about 30 minutes later after the full effect

of cycloplegia was reached (Manny et al., 1993).

Under full cycloplegia and pupillary dilation, the subject was instructed to fixate

on the 0.2 logMAR line on the displayed Bailey-Lovie letter chart through a

6 mm artificial pupil, with the fellow eye fully occluded by a black eye patch.

The subject‟s defocus level was controlled by moving the Badal stage and the

astigmatism derived from the individual subjective refraction was corrected using

a trial lens mounted in front of the artificial pupil. Using a static correction mode

in the AO system, the operator corrected the natural 0

4Z in the subject‟s eye

before any combination of additional wavefront error was input, while the other

HOAs (aside from 0

4Z ) were left uncorrected. The subject was asked to identify

the “clearest” position, which corresponds to the subjective best focus, and

“objectionable blur” in both directions when the Badal stage was moved towards

and away from the eye (representing the positive and negative direction,

respectively). To measure the subjective DOF of the subject, the experiment

operator first adjusted the location of the Badal stage to allow the subject to find

the “clearest” position. The scale reading of Badal stage corresponding to the

“clearest” position and the visual acuity of the subject was recorded. The operator

then slowly moved the Badal stage in one direction (toward or away from the eye)

which was randomly selected, until the subject noticed the appearance of

“objectionable blur”. The scale reading of the Badal stage was recorded by the

148

operator. The same procedure was repeated as the operator moved the Badal stage

in the opposite direction. The two recorded limits of Badal stage reading

corresponding to the two locations where “objectionable blur” was observed

constituted one measurement of DOF. The operator controlled the movement

speed of the Badal stage to be slower than 0.2D/s and the speed was varied during

the movement to avoid the possibility that the subject may remember the time

course when they noticed the two “objectionable blur” positions in previous

measurements. Five sets of such measurements were performed for each set of

0

4Z and 0

6Z combination introduced to the eye. For each subject a total of 41 0

4Z

and 0

6Z combinations were tested.

The whole experiment took approximately two hours to complete, including a 20-

minute break after half of the combinations were tested. The subject‟s

accommodation response was examined one hour after the commencement of

experiment and at the end of experiment to ensure that there was no significant

(i.e., less than 0.1 D) recovery of accommodation. This was achieved by

performing five DOF measurements on the bare eye of the subject every one hour,

and comparing to the bare eye DOF value obtained at the beginning of the

experiment.

During the experiment, the subject‟s head was positioned in a heavy, adjustable,

custom-made head rest without the use of a bite bar to minimize the discomfort in

the 2-hour testing. The operator can adjust the position of subject‟s head with

respect to the system‟s optical axis in three dimensions. Before commencing each

set of measurement, the subject‟s pupil position was monitored by comparing the

pupil position on the sensor CCD with and without the artificial pupil in the

HASO control software (Imagine Eyes, Orsay, France). When a displacement of

pupil of greater than 0.3 mm was observed, the position of the subject‟s head was

immediately corrected by the experiment operator.

Since large amount of 0

4Z and 0

6Z were induced to the eye, it was important to

evaluate the potential effect of pupil offset on the results. During the

measurement, the subject was instructed to keep their jaw tightly closed, and the

most significant eye movements were observed in the horizontal direction. The

149

possible effect of horizontal pupil movement of 0.3 mm to the resulting

wavefront in a 6 mm pupil was simulated, when 0.6 µm of 0

4Z , 0.25 µm of 0

6Z ,

and a combination of the two aberrations was induced by the AO system,

respectively. The simulated results for subject 3 are shown in Figure 7.4 as an

example.

Figure 7.4 Effect of pupil offset on the combination of wavefront aberrations.

Although the total HOA RMS value has only slightly changed after the simulated

pupil offset, different types of HOAs could be induced due to the pupil movement.

The major HOA (with an RMS value greater than 0.1 µm) produced by a

maximum pupil offset of 0.3 mm for the three conditions were: 0.36 µm of

horizontal coma ( 1

3Z ) when 0.6 µm of 0

4Z was induced; 0.22 µm of 1

3Z and 0.23

µm of secondary horizontal coma 1

5Z when 0.25 µm of 0

6Z was induced; 0.16

µm of 1

3Z and 0.23 µm of 1

5Z when the combination of 0.6 µm of 0

4Z and 0.25

µm of 0

6Z were induced. It they occurred, these offsets of the pupil would induce

some variability in the results. Multiple measurements were performed for each

induced type of wavefront aberrations to minimize this effect. It should also be

noted that only the maximum effect (for both pupil offset and amount of induced

HOAs) have been simulated, however the actual pupil offset was typically much

smaller during the experiment.

7.3 Results

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7.3.1 Effect of different combinations of 0

4Z and 0

6Z on the DOF of real

eyes

The average changes in DOF of real eyes caused by different combinations of 0

4Z

and 0

6Z are shown in Table 7.3 and Figure 7.5, and the equivalent average

decrease of VA in logMAR is shown in Figure 7.6.

Table 7.3 Mean changes of DOF and standard deviation of real eyes with the

introduction 0

4Z and 0

6Z alone and in combination (with opposite signs).

Increased DOF was obtained through inducing combinations of 0

4Z and 0

6Z to the

eye. An approximately linear increase of DOF was observed with increasing

levels of 0

4Z , for both positive or negative coefficients up to 0.6 µm, as shown in

Figure 7.5a. The increase in DOF was about 0.8 D for a value of 0.6 µm of 0

4Z

coefficient. Adding positive 0

6Z showed slightly better efficiency in extending the

DOF, with an average DOF increase of 0.87 D for +0.25 µm of 0

6Z , whereas the

increase in DOF was 0.70 D when 0.25 µm of 0

6Z was added to the eyes (Figure

7.5b). The combination of 0

4Z and 0

6Z of different coefficient signs to the eye‟s

wavefront produced some significant increases in DOF at relatively low levels of

aberrations (<0.45 µm), compared with the 0

4Z and 0

6Z terms in isolation (Figure

7.5c).

151

Figure 7.5 Effect on DOF by introduction of (a) 0

4Z alone (b) 0

6Z alone, and (c)

combinations of 0

4Z and 0

6Z . All plots (a), (b) and (c) have common x and y scale

to aid comparison between different conditions.

152

Figure 7.6 Decrease in VA [logMAR] of real eyes with the introduction of (a) 0

4Z

alone (b) 0

6Z alone, and (c) combinations of 0

4Z and 0

6Z with opposite signs.

Cases in which one or more subjects did not satisfy the best achievable VA of

0.2 logMAR criterion are indicated in red color. All plots (a), (b) and (c) have

common x and y scale to aid comparison between different conditions.

153

Figure 7.7 ∆DOF versus ∆VA induced by 0

4Z , 0

6Z and combinations of 0

4Z and

0

6Z .

154

In Figure 7.7, the increase of DOF has been plotted against the loss of VA caused

by (a) 0

4Z alone, (b) 0

6Z alone and (c) combinations of the two Zernike

coefficients with opposite signs. In the experiment of this study, using pure 0

4Z

and 0

6Z helped to expand the DOF on average by 0.27 and 0.24 D per 0.1

logMAR loss of VA (Pearson‟s correlation R2=0.21 and 0.18 respectively, and all

p <0.001). The combination of 0

4Z and 0

6Z was found to provide a steeper slope

for DOF extension with 0.40 D increase in DOF for every 0.1 logMAR loss of

VA (Pearson‟s correlation R2=0.23, p <0.001). Comparisons of the regression

coefficients were performed in SPSS 16.0. The regression coefficient of

0

6

0

4 & ZZ data was found to be significantly different to the 0

4Z data and 0

6Z data

(p=0.048 and 0.037, respectively). No significant difference was found between

the 0

4Z and 0

6Z data (p=0.77).

The combinations of 0

4Z and 0

6Z which provide maximum extension of DOF for

each of the six individual subjects are presented in Table 7.4.

Table 7.4 Optimal combination of wavefront to extend DOF for each subject

Subjects 0

4Z 0

6Z Max ∆DOF

Subject 1 -0.4 0.20 1.41

Subject 2 -0.4 0.20 1.02

Subject 3 0.4 -0.25 1.66

Subject 4 -0.4 0.20 1.87

Subject 5 -0.4 0.20 1.44

Subject 6 0.4 -0.15 0.97

7.3.2 Effect of combinations of 0

4Z and 0

6Z on centre of focus (COF)

Introducing combinations of 0

4Z and 0

6Z also caused a shift of the centre of focus

(COF) as determined by the subject using the Badal system adjustment. An

approximately linear shift of COF was observed when 0

4Z , with either positive or

negative values, was induced with an average change of 2.9 D shift of centre of

155

focus per micron of 0

4Z (D/µm) (Figure 7.8a). The introduction of 0

6Z also

shifted the COF by approximately 3.5 D/µm. The relationship between the

change in 0

6Z and COF was again close to linear (Figure 7.8b). The tested

combinations of 0

4Z and 0

6Z of different signs caused larger shifts of COF than

using 0

4Z or 0

6Z alone with 3.9 D/µm of combined wavefront RMS (Figure 7.8c).

Figure 7.8 Shift of centre of focus (COF) caused by introduction of (a) 0

4Z alone;

(b) 0

6Z alone, and (c) combinations of 0

4Z and 0

6Z .

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7.4 Discussion and conclusion

The introduction of controlled levels of primary spherical aberration ( 0

4Z ) to the

eye, has been utilized clinically as a passive approach to help presbyopic patients

to regain part of their near vision with multifocal contact lenses and intraocular

lenses (Plakitsi & Charman, 1995; Schmidinger et al., 2006). However, the effect

on DOF of secondary spherical aberration ( 0

6Z ) and combinations of 0

4Z and 0

6Z ,

which are naturally present in the human eye, are unknown. In this study, the

ratio of increase of DOF and change of retinal image quality was used to help

determine the optimal wavefront combination of 0

6Z and 0

4Z . The effect of these

wavefront combinations to extend the DOF in real eyes was investigated in

experiments aided by an AO system.

A higher average value of subjective DOF defined by “objectionable blur”

(2.59±0.52 D) was found in this study, compared to the value of Atchison et al

(1.77 D, 2005; 1.62 D, 2009) and Legras et al (1.67D, 2010). Due to the limited

number of subjects (six subjects) used in this study, it was not surprising to

observe the difference of results. In an earlier study of Yi et al (2010), the authors

reported a mean subjective DOF value of 0.79±0.15 D (ranging from 0.55 to

1.05 D) in 17 subjects, defined by the blur criterion of “just noticeable blur”. A

significant between-subject effect was also reported by Atchison et al (2009) on

blur limits. The authors reported the most insensitive subject had a blur limit

(“objectionable blur”) 3.1 times as large as the most sensitive subject in their

study involved seven subjects. The most insensitive subject in our study had a

DOF value 1.8 times as large as the most sensitive subject. The magnitude of

DOF defined by “objectionable blur” was found to be 2.3-2.9 times larger than

the value defined by “just noticeable blur” (Atchison et al, 2005, 2009). Therefore,

the mean value of 2.59±0.52 D found in this study could be regarded as at the

higher end of the range of DOF defined by the “objectionable blur”.

When larger amounts of 0

4Z (up to 0.6µm) or 0

6Z (up to 0.25µm), either positive

or negative, were induced in the subject‟s optics, a larger DOF was generally

observed. Using a similar blur criterion of “acceptable vision”, Benard, Lopez-Gil

& Legras (2010) reported an increase of DOF of about 1.41 dioptres per micron

157

(D/ µm) when 0.3 and 0.6 µm of 0

4Z were induced to the eye.In our experiment,

inducing 0

4Z or 0

6Z alone increased, on average, the DOF by approximately

1.36 dioptres per micron (D/µm) and 3.14 D/µm, respectively. When the total

wavefront RMS was kept at a level less than 0.45 µm, the combined wavefront of

0

4Z and 0

6Z with opposite signs extended the DOF, on average, by 2.52 D/µm.

The largest DOF before causing a loss of more than 2 lines of VA of four of the

six subjects was measured when the wavefront combination of 0.4 µm of 0

4Z

and 0.2 µm of 0

6Z was induced in the eye. The other two subjects achieved their

maximum DOF when 0.40 µm of 0

4Z combined with 0.25 µm and 0.15 µm of

0

6Z were induced. After the maximum DOF was observed, an increase of HOA

did not help to further extend the. DOF obtained under the influence of different

wavefront combinations would depend on the criteria of blur adopted (Atchison

et al., 2005) and spatial frequency detail of the target used (Tucker & Charman,

1975). In this study, the “objectionable blur” criterion was adopted to define the

DOF. This criterion was reported to produce a DOF approximately 2.1 to 2.5

times larger than the “just noticeable blur” limits (Atchison et al., 2005). The

measured DOF would also be expected to increase when a larger letter size is

used for the test (Tucker & Charman, 1975; Atchison et al., 2005).

The effect of the optimal wavefront combinations on DOF for 100 virtual eyes

has been simulated. However, the predicted response from the virtual eye‟s DOF

differed in some ways from the experimental results obtained in the six real eyes.

Thibos (2009) compared the predicted monochromatic retinal image quality in

1000 virtual eyes using 31 image quality metrics. Lower levels of retinal image

quality were found in virtual eyes than in human eyes (10% difference on

average). One possible reason is that, although the multivariate Gaussian model

wavefronts generated from statistics of a population of healthy eyes represents the

mean and variance of wavefront aberration in human eyes (Thibos, Bradley &

Hong, 2002), the random structure of the wavefront in virtual eyes may lack the

natural interaction among HOAs of real eyes. This could produce an advantage

for image quality in real eyes if the combination of aberration is not random.

McLellan et al (2006) studied the modulation transfer functions (MTF) of the

158

measured wavefront aberrations and of the wavefronts created by randomizing

the sign or orientation of the aberrations, while maintaining the RMS error of

each Zernike order. It was found that the wavefront aberrations of real eyes

generally had better MTF ratios (defined as real MTF/mean simulated MTF)

compared to the randomized wavefronts. The true wavefronts also tended to be

flatter near the center of pupil than the mean simulated wavefronts (McLellan et

al., 2006). The authors therefore suggested there could be a natural interaction in

the aberrations of real eyes to optimize the image quality, which was missing in

the randomly generated wavefront aberrations. Another factor affecting the

predicted results of the virtual eye group may arise from the choice of a fixed

theoretical threshold (VSOTF=0.12, correlating to a visual acuity level of

approximately 0.2 logMAR reported by Cheng, Bradley and Thibos (2004)) to

define the DOF. As shown in the study in Chapter 4, the threshold level for

estimating the DOF from wavefront aberrations can be optimized for different

subjects.

The interaction between defocus 0

2Z and primary spherical aberration 0

4Z was

earlier investigated by Thibos et al (2002b) and Applegate et al (2003). They

found that by adding 0

2Z to 0

4Z in the right proportions, the peak-to-valley of

wavefront error in the centre of the pupil can be markedly reduced, which would

help to improve the retinal image quality. The authors also suggested the similar

balancing between other HOAs could influence visual performance. It was found

in the experiment that combinations of 0

4Z and 0

6Z with different signs can

significantly expand the DOF, while combinations of the same sign do not help to

increase the DOF. This phenomenon can be explained by the interaction between

the two wavefront aberrations. The Zernike polynomials describing the primary

( 0

4Z ) and secondary spherical aberrations ( 0

6Z ) are defined as

1665 240

4 Z

11230207 2460

6 Z

.

159

Figure 7.9 (a) Wavefront combination of 0.4 µm of 0

4Z and 0.2 µm of 0

6Z and

its through-focus point spread function shown in (c); (b) Wavefront combination

of 0.4 µm of 0

4Z and 0.2 µm of 0

6Z and its though-focus point spread function

shown in (d).

In a wavefront combination that consists of 0

4Z and 0

6Z with the same sign, their

common components of 4 and 2 compensate each other and create a flatter

shape in the centre of the combined wavefront, and hence diminish the bifocal

effect of the wavefront (Figure 7.9a). While in a combination of 0

4Z and 0

6Z of

different signs, the multifocal feature is enhanced, as shown in Figure 7.9b (i.e.

the peak to valley is greater). A set of through-focus point spread functions (PSF)

of these two combined wavefronts are shown in Figure 7.9c and 7.9d. One can

160

observe the extended DOF in the PSF created by the wavefront combination of

0

4Z and 0

6Z with the opposite signs. When 0

4Z and 0

6Z have opposite signs, the

through focus PSF shows relatively little change as defocus level changes. On the

other hand, when 0

4Z and 0

6Z have the same sign, the PSF shows a large difference

as a function of defocus

Using HOAs to extend the DOF also causes a trade-off between the increase of

DOF and lowered VA. Introduction of pure 0

4Z and 0

6Z degraded the VA, on

average, at 0.30 logMAR/µm and 0.83 logMAR/µm, respectively. While the

combined wavefront of 0

4Z and 0

6Z reduced the VA at a rate of 0.40 logMAR/µm

(see Figure 7.6). The combinations of 0

4Z and 0

6Z of opposite signs were found

to provide less impact on VA to extend the subject‟s DOF. For the loss of every

0.1 logMAR VA, there was an increase of 0.40 D in DOF, compared to 0.27 and

0.24 D/0.1 logMAR for 0

4Z and 0

6Z alone.

Studies by different groups (Jacobs, Smith & Chan, 1989; Legras et al, 2004;

Cheng et al, 2010; Legras & Benard, 2010) have reported that there was no

significant difference between subjective DOF measured through-focus in a

Badal optical setting (the observer method) and the DOF value predicted when

the subject viewed defocused stimuli presented on a projection screen (the source

method). Therefore, it was proposed that a series of computer generated

defocused target images can be used instead of introducing different levels of

defocus blur to the target to determine the subjective DOF. This method has been

used in various studies (Schmid et al., 2002; Legras, Chateau & Charman, 2004;

Cheng et al, 2010).

During our experiment, the level of defocus induced to the eye was controlled by

moving the Badal stage. This gave the subjects realistic, continuous through-

focus vision when locating the “objectionable blur” limits, and the centre of

focus.The “observer method” also provides the experimenters with information

related to shifting of the centre of focus (COF) under the influence of HOA,

which is important for the design of presbyopic optical corrections for near and

intermediate vision. A linear shifting of COF averaging 2.9 dioptres per micron

161

(D/µm) was observed when up to 0.6 µm of 0

4Z (either positive or negative) was

induced. This result was similar to that reported by Rocha et al (2009), who found

an average shift of COF of 2.6 D/µm for 0

4Z . The use of 0

6Z shifted the COF by

approximately 3.64 D/µm. The combination of 0

4Z and 0

6Z of different signs

produced larger shifting of COF than when either individual wavefront aberration

was induced. It was also noticed that when a higher amount of HOA was used to

expand the DOF, the subject found it more difficult to identify the optimal focus,

with a less sharp image throughout the range. This resulted in a larger standard

deviation when measuring the shifting of COF under conditions with higher

levels of HOAs.

In conclusion, the results in this study show that systematic introduction of a

targeted amount of both 0

4Z and 0

6Z can significantly improve the DOF of

healthy subjects. The use of wavefront combinations of 0

4Z and 0

6Z with opposite

signs can further expand the DOF, than using 0

4Z or 0

6Z alone. It is important to

determine the balance between the loss of visual quality and expanded DOF

under different clinical and daily life conditions. The optimal wavefront

combinations to expand the DOF were estimated using the ratio of increase in

DOF and loss of retinal image quality defined by VSOTF. In the experiment, the

optimal combinations of 0

4Z and 0

6Z provided a better balance of DOF expansion

and relatively smaller decreases in VA, which could be useful in the design of

presbyopic optical corrections such as multifocal contact lenses and intraocular

lenses.

162

Chapter 8. Conclusion and Summary of the thesis

The aim of this research study was to investigate the interaction between the DOF

and the wavefront aberrations of the eye, with a view to using higher-order

wavefront aberrations to expand the DOF. The following section summarizes the

findings from studies in this research program and provides an overview of the

relationship between HOAs and DOF, and how HOAs can be used to optimize

the DOF (Figure 8.1).

8.1 Influence of HOAs on the depth of focus

To expand the DOF through wavefront aberrations requires a comprehensive

understanding of the relationship between the natural HOAs and DOF. Through

the first three studies in this research program, knowledge of the influence of

wavefront aberrations on the DOF has been obtained.

8.1.1 Modelling the DOF in different clinical groups

In Study 1, the influence of different levels of total HOAs on DOF was

theoretically evaluated by modelling the DOF of a large number of subjects from

four clinical groups, including young emmetropes, myopes, presbyopes and

keratoconics. A through-focus simulation program based on image quality

metrics (IQM) was designed to theoretically estimate the DOF of subjects from

their wavefront measurements.

As a result of higher levels of HOAs, the keratoconic group showed the largest

predicted DOF, but at the expense of much poorer retinal image quality. The

group means of predicted DOF of the myopic and presbyopic groups were also

significantly larger than that of the emmetropes. This association showed that

there was a positive correlation between the amount of total HOAs and DOF.

163

Figure 8.1 Flowchart of the objectives, designed studies and outcomes of this research.

164

The wavefront data from the myopic and presbyopic groups were also used to

simulate the effect of spherical aberration induced by myopic refractive

correction (e.g. LASIK) and presbyopic correction (e.g. progressive power IOL)

on the subject‟s DOF. The simulation of induced primary spherical aberration

(Zernike term 0

4Z ) in the myopic and presbyopic eyes, with either positive or

negative sign, produced modest increases in DOF at the expense of slight losses

in image quality. It was observed in several presbyopic and keratoconic subjects

with relatively higher amounts of natural secondary spherical aberration (Zernike

term 0

6Z ), that the introduction of the same amount of 0

4Z produced significantly

greater DOF extension than that observed in other subjects with lower amounts of

natural 0

6Z . This suggested that there may be an interaction between the induced

primary spherical aberration and natural secondary spherical aberrations present

in the eyes, which could help to further expand the DOF.

8.1.2 Estimation of DOF from wavefront measurements

In Study 1, the subject‟s DOF was calculated using an IQM based through-focus

algorithm with fixed threshold levels (50% and 80%). Similar methods have been

used by Legge et al (1987), Jansonius and Kooijman (1998), and Marcos et al

(1999). Selection of different retinal image quality metrics and the threshold

levels could significantly affect the calculated DOF.

In Study 2, a method was developed to estimate the threshold level for IQMs,

which would correlate with the subjectively measured DOF and lead to a method

for estimating DOF directly from a single measurement of wavefront aberrations.

A modified through-focus algorithm from Study 1 was used to find out the

matching threshold level for each individual subject. This algorithm was later

applied on the retrospective wavefront data of three different refractive groups:

young myopes, young emmetropes and presbyopes, to estimate their DOF. The

major findings and conclusions of this study include:

1. It is possible to estimate DOF of the eye directly from wavefront

measurements using retinal IQMs. The IQM threshold level used to

estimate the DOF from wavefront aberrations can be adaptively optimized

for each individual subject.

165

2. Using a fixed threshold level (50% or 80%) to estimate the DOF of

different subjects or DOF of the same subject with different pupil sizes

may lead to erroneous results.

Through Study 2, quantification of the effect of total HOAs on DOF in normal

eyes was achieved. However, the effect of higher levels of HOAs, compared to

those in the normal eyes, and how different Zernike coefficients can affect the

DOF, needed further clarification.

8.1.3 Subjective measurement of DOF in keratoconic eyes

In Study 3, subjective DOF of keratoconic eyes was measured and compared with

that of normal subjects. Since keratoconus results in significant increases in the

level of HOAs of the eye, including spherical aberration, coma and trefoil, this

population of subjects provides an opportunity to study the influence of these

HOA on DOF.

A dual-channel Badal optical system, similar to the apparatus used by earlier

experiments of Legge et al (1987) and Wang and Ciuffreda (2004), was used to

measure the DOF in a group of normal subjects and a group of keratoconic

subjects. The measurements on the normal eyes were performed in two conditions

with and without cycloplegia. No significant changes were found between the

DOF, HOA RMS, and spherical aberrations 0

6

0

4 ZZ in the control subjects

measured before and after cycloplegia.

The total HOA RMS in keratoconic eyes was approximately three times larger

than the average value in normal eyes. The DOF measured in keratoconic eyes

were also found to be significantly larger than that in normal eyes. Among all

HOA terms, spherical aberration was found to be the only HOA that was

associated with increased DOF in the keratoconic subjects.

8.2 Design and construction of the AO system for experiments

Adaptive optics (AO) is an important technology for real-time measurement and

modification of the wavefront aberrations in the human eye. An AO system was

designed and constructed (study 4) to allow testing of the interaction between

166

HOA and DOF in future experiments (study 5). The customized AO system was

designed based on the HASO32TM

wavefront sensor and the Mirao52TM

deformable mirror. The AO system was capable of measuring and changing the

wavefront aberration of the eye and measuring the DOF under the influence of

different combinations of HOA. During the design and construction of the AO

system the following experiments were conducted:

1. Calibration and evaluation of the wavefront measuring function of the

HASO32 wavefront sensor with a model eye and with real eyes in

comparison with a commonly used commercial wavefront sensor (COAS

HD, Wavefront Sciences, Inc.)

2. Evaluation of the wavefront generating function of the Mirao52

deformable mirror for the Zernike terms 0

4Z , 0

6Z alone and their

combinations.

3. Evaluation of the closed-loop wavefront correction of the AO system

utilizing the two major components: the HASO32 wavefront sensor and

the Mirao52 deformable mirror.

4. Reconstructing wavefront aberrations from the Zernike coefficients

calculated by the system‟s CASAO V3.0 software and directly from the

original slope files obtained by the HASO32 sensor (shown in Appendix

B).

The completed AO system was then used in an experiment to expand the DOF in

the human eye with optimal wavefront combinations of 0

4Z and 0

6Z .

8.3 Expanding the DOF of the human eye through optimal

combinations of primary and secondary spherical aberrations

The idea of extending the DOF through optimized combinations of 0

4Z and

0

6Z was based on mimicking the natural wavefront structure of the accommodated

young eye.

The changes of 0

4Z and 0

6Z during accommodation have been studied by different

groups (Ninomiya et al., 2002; Cheng et al., 2004; Roorda & Glasser, 2004).

167

Ninomiya et al. (2002) found significant changes of both 0

4Z and 0

6Z (in a 6 mm

pupil) during accommodation (at a 3.0 D accommodation level). In the study of

Cheng et al. (2004), the authors reported a significant negative shift of 0

4Z as the

accommodative level increased, while the 0

6Z showed a trend (not significant)

towards more positive values. Roorda and Glasser (2004) found noticeable

changes with accommodation, in an isolated porcine crystalline lens, for 0

4Z ,

which became more negative, and for 0

6Z , which progressed from negative to

positive with accommodation. It was also found in Study 1, that the interaction

between 0

4Z and 0

6Z may have the potential to further extend the DOF in the

human eye.

In study 5, the effect of 0

4Z and 0

6Z to extend the DOF was investigated with the

aid of the AO system. The optimal combinations of 0

4Z and 0

6Z were modelled

using a though-focus algorithm and then applied to study their influence on the

DOF in real eyes. The effect of the changes of wavefront aberrations on visual

resolution was also studied, since increasing DOF is typically associated with loss

of image quality. We found that introducing 0

4Z and 0

6Z alone, with either positive

or negative sign, can significantly improve the DOF of healthy subjects. Using

0

4Z alone increased, on average, the DOF by approximately 1.36 D/µm,

while 0

6Z alone helped to extend the DOF by 3.14 D/µm. The combinations of 0

4Z

and 0

6Z of opposite signs extended the DOF, on average, by 2.52 D/µm. We also

found that expanding the DOF by inducing HOAs decreases VA at the same time.

The ratio of increase of DOF and loss of VA was use to evaluate the efficiency of

wavefront aberrations to extend the DOF. Combinations of 0

4Z and 0

6Z with

opposite signs were found to expand the DOF more effectively, producing an

average increase of DOF to loss of VA of 0.40 D (DOF)/0.1 logMAR loss,

compared to 0.27 and 0.24 D (DOF)/0.1 logMAR loss for 0

4Z and 0

6Z alone,

respectively.

168

8.4 Future directions

In this thesis, the development of methods to estimate and extend the DOF in the

human eye has been explored. In particular, the use of combinations of Zernike

terms 0

4Z and 0

6Z have been shown to have potential as a method for enhancing

DOF. Recommendations to build upon this work are now discussed.

The development of practical methods for estimating the DOF in subjects with

significantly higher amount of HOAs is an unresolved issue. In Chapter 4, a

method has been proposed for estimation of DOF directly from wavefronts in

normal eyes with an individually calculated IQM threshold level, which closely

correlates to the subjective DOF. However, there was a limitation of the range of

HOA RMS which can be applied in the algorithm. For subjects with significantly

higher amount of HOAs compared to normal subjects, such as patients who have

undergone corneal refractive procedures and keratoconic subjects, their DOF

could not be predicted accurately using the developed method.

Development of methods to accurately estimate the shift of COF caused by

different HOA combinations is also an important clinical issue. Extending DOF

by introducing HOAs may bring changes to the COF, which is important for the

design of presbyopic optical corrections for near and intermediate vision. Cheng,

Bradley, & Thibos applied 31 different objective IQMs to predict the best focus

under the influence of primary spherical aberration ( 0

4Z ) and secondary

astigmatism ( 2

4

Z ). Some IQMs, especially those taking into account neural

contrast sensitivity functions (i.e. VSOTF), were found to be well correlated with

the through-focus or through-astigmatism VA. A better method to investigate the

influence of HOAs on shift of COF is to subjectively measure the shift of COF in

real eyes with natural pupils viewing targets of sinusoidal grating patterns with

different spatial frequencies, orientations and contrasts, affected by HOAs

induced through an AO system. However, such an approach would be complex

and time consuming.

Investigation of the impact of wavefront aberrations on DOF can also be

extended. In this program, the effects of 0

4Z , 0

6Z and their combinations to the

DOF in human eye has been investigated. However, there is still a lack of

169

knowledge of how the HOAs with non-symmetrically rotational characteristics

(Zernike coefficients with an azimuthal frequency m ≠ 0) may affect the eye‟s

DOF. Early clinical results have shown that a small amount of myopic

astigmatism can enhance the DOF in pseudophakic eyes, providing at least 6/9

visual acuity for both near and distant vision in optimal cases (Huber, 1981;

Sawusch & Guyton, 1991). Similar interaction may also exist between HOAs and

defocus to enhance the DOF in specific orientations and is worth investigating.

This can also be investigated with the aid of the AO system.

8.5 Conclusions

The DOF serves an important function of defocus tolerance in the human eye. It

can effectively reduce the required amount of accommodation to focus on targets

moving through a range of distances from near to far or from far to near, without

causing the perception of blur. Young eyes with active accommodation can

benefit from a large DOF. When the accommodative error is smaller than the

DOF, there will be no accommodative response change. Without the tolerance of

defocus, the eye will need to constantly change accommodation to keep a perfect

focus on the target. For presbyopic subjects with partial of complete loss of

accommodation, a large DOF is desirable since it helps to maintain clear vision

through a range of near to intermediate distances without the aid of corrective

lenses.

The DOF of the human eye can be affected by various factors including the

optical properties and retinal and visual processing properties. The optical

properties of the eye can be largely determined by knowing the wavefront

aberrations and pupil size. In this research program, the interaction of the optical

HOAs and DOF was investigated. Methods were developed to estimate the DOF

in human eyes from the wavefront aberrations and to extend the DOF by inducing

optimal combinations of HOAs. In particular, the combination of 0

4Z and 0

6Z with

different signs was used to provide better efficiency at extending the DOF than

using primary spherical aberration 0

4Z alone.

170

The outcomes of this research study help to extend the knowledge of enhancing

DOF by using HOAs. In addition, the findings from this study also provide a

potentially useful approach for designing optical corrections for presbyopia,

through methods such as contact lenses and intraocular lens designs.

171

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Appendices

Appendix A- Calibration results of HASO against COAS in 10 real eyes 202

Appendix B- Reading wavefront data from HASO measurements 212

Appendix C- Ethics information sheet & consent form 214

Appendix D- Published paper 1 215

Appendix E- Conference abstract 1 224

201

Appendix A- Calibration results of HASO against COAS in 10

real eyes

The wavefront measured by the HASO sensor of the AO system is compared with

the results from a COAS system. The wavefront from the left eye of 10 subjects

was first acquired by a COAS system (average of 60 frames), and then compared

to the measurements using HASO (average of 10 frames). The results of the

evaluation in a 6 mm pupil are shown. Note the results shown in HASO are with

defocus pre-compensated via a Badal system, so the value of sphere in these

measurements can not be compared with COAS measurements)

Subject 1: 23yo

202

Subject 2: 46yo

203

Subject 3: 28yo

204

Subject 4: 27yo

205

Subject 5: 28yo

206

Subject 6: 26yo

207

Subject 7: 32yo

208

Subject 8: 28yo

209

Subject 9: 25yo, Lasik subject

210

Subject 10: 29yo

211

Appendix B- Reading wavefront data from HASO measurements

Two types of data files can be obtained from the wavefront measurements

performed by the HASO sensor. They are: (1) *.txt or *.txtc files that contain the

Zernike coefficients and (2) *.has files that contain the original (raw) slope

information. The wavefront generated from the raw slope information could

provide accurate results compared to the HASO Zernike files which are processed

by the manufacturer‟s software with unknown filtering and fitting methods. The

Zernike slope polynomials developed by Nam, Thibos and Iskander (2009a,

2009b) were used to reconstruct the wavefront and derive the refractive power

map directly from the original slope files.

The physical centre of the four actuators (22, 23, 30 and 31) of the Mirao52 DM

was carefully aligned with the centre of the CCD of HASO sensor as shown in

following figure.

Different higher order Zernike polynomials were then generated for a 6 mm pupil

using the DM, which were measured by the HASO sensor and recorded in *.txt

212

and *.has files. No significant difference was found between the HOA RMS

obtained from the two methods and good similarities were observed in most of

the measurements. However, some difference can be seen for the generated

secondary spherical aberration ( 0

6Z ) recorded in the two files. The results

reconstructed from the slope file showed better symmetrical features than the

results obtained from the corresponding coefficient file.

213

Appendix C- Consent form

VISUAL OPTICS PROJECT

RESEARCH CONSENT FORM

Name of chief investigator: Dr Michael Collins Phone (W) 3138 5702 (AH)

3289 3940

By signing below, you are indicating that:

The tests and procedures involved in this study have been explained to me,

I have read the information sheet,

I have been given the opportunity to ask questions regarding this project

and the tests involved,

I understand that if I have additional questions I can contact any member

of the research team,

I have been informed that I am free to withdraw from the study at any

time, without comment or penalty;

The project is for the purpose of research and not for treatment of my eyes;

I can contact the QUT Research Ethics Officer on 3138 2091 or

[email protected] if I wish to raise any concerns about the

conduct of this research.

I consent to participate in this project.

Participant's

name:...............................................................................................…

Signature: .........................................................

Date .................................

214

Appendix D- Published paper 1

halla
Due to copyright restrictions, this article is not available here. Please consult the hardcopy thesis available from QUT Library or view the published version online at: http://dx.doi.org/10.1167/10.4.3

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Appendix E- Conference abstract 1

4971—D767

Subjective Measurement of Depth of Focus in Keratoconus

F. Yi, D. R. Iskander and M. J. Collins

School of Optometry, Queensland University of Technology, Brisbane, Australia

Commercial Relationships: F. Yi, None; D.R. Iskander, None; M.J. Collins, None.

Support: None.

Abstract

Purpose: To measure the subjective depth of focus (DOF) in keratoconic eyes and

compare it to that of normal eyes.

Methods: We measured the subjective DOF in two groups of subjects with a dual-Badal-

channel optical system. The first group consisted of 10 normal subjects and the second

group consisted of 5 keratoconic subjects. We measured DOF of the normal subjects

under conditions both with and without cycloplegia, whereas for the keratoconics,

measurements were performed on both eyes without cycloplegia.

The wavefront

aberrations and corneal topography were also collected for the keratoconic subjects.

From the topography files, we calculated the physical dimensions of the keratoconic cone

including its distance to the pupil centre and volume.

Results: When comparing the subjective DOF and higher order aberration (HOA)

measured in the control group with and without cycloplegia, the results were highly

correlated and no statistically significant difference was found (p>0.05). It was found that

the subjective DOF measured in the keratoconic eyes (0.90 ± 0.21 D)

was significantly

larger than that in normal eyes (0.73±0.09 D). The keratoconic group showed a mean

value of HOA RMS approximately three times larger than that in the control group, with

high levels of coma. However, there was no significant correlation

between the larger

HOA RMS and DOF of keratoconics (Pearson‟s r=0.31, p>0.05). Significant correlation

was found between keratoconic DOF and the HOA RMS contributed by the anterior

cornea (Pearson‟s r=0.67, p<0.05), and moderate correlation was found between DOF

and the cone location, and between DOF and cone volume (r=-0.59, 0.58 and p=0.07,

0.08 respectively).

Analysis was also performed between the two eyes of each

keratoconic subject to identify the optical factors causing the difference

of DOF between

the two eyes. Strong correlation was found between the difference of DOF and the RMS

value of symmetrical aberrations (r=0.96, p<0.01), and between the difference of DOF

and the difference of cone dimensions (r=-0.95 and 0.92, both p<0.05).

Conclusion: By using a dual-Badal-channel optical system, we can reliably measure the

subjective DOF without cycloplegia. The DOF measured in keratoconic eyes was

significantly larger than that in normal eyes. However there was not a strong correlation

between the large amount of HOA RMS and DOF in keratoconic eyes.

Keywords: depth • keratoconus • topography