virology - globalsecurity.org · how flu viruses change “some of the commonest infections have a...
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Virology
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Different types of flu virusesFlu viruses are divided into three main groups: Influenza A, B and CA viruses – source of ‘ordinary’ flu epidemics and all pandemicsA viruses also infect birds and other animals such as pigs and horsesB and C viruses infect humans only
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Humans onlyType CHumans onlyType B
Humans, birds, pigs and horses
Type A
HostsInfluenza Types
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How flu viruses change
“Some of the commonest infections have a particular ability to change, influenza viruses being the chameleons of the microbial world.”
Getting Ahead of the Curve – a strategy for combating infectious diseases – A report by the Chief Medical Officer, January 2002
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Classification of influenza viruses
Haemagglutinin (H)glycoprotein enables virus to attach to host cell15 exist in natureH1, H2 and H3 most commonly associated with human infection
Neuraminidase (N)glycoprotein enzyme essential for virus replicationenables new virion to be released from host cellN1 and N2 most commonly associated with human infection
Two proteins on the surface of the virus:
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ChangeParticular characteristic that enables influenza A viruses to cause annual epidemics, even pandemicsType A viruses undergo frequent changes in their surface antigens or proteinsMinor changes - antigenic driftMajor changes - antigenic shift
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Antigenic drift
Occurs among influenza A viruses resulting in emergence of new variants of prevailing strains every yearNew variants result in seasonal flu each winterSome years are worse than others –partly related to degree of ‘drift’
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Antigenic shiftMajor changes occur in the surface antigens of influenza A virusesOccurs by mutation or by ‘reassortment’between virusesChanges are more significant than those associated with antigenic driftChanges lead to emergence of potentially pandemic strains by creating a virus that is markedly different from recently circulating strains
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Antigenic shiftOccurs in two ways:
Sudden ‘adaptive’ change during replication of a normal virus OR
From an exchange of genes between human strain of an influenza A virus and an animal strain
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Antigenic shiftGenetic exchange or ‘re-assortment’produces a new virus capable of causing a pandemic in humansCan occur when an animal becomes infected with human and animal flu virus at the same timeAnimal within which this genetic exchange takes place know as ‘mixing vessel’
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Antigenic shiftPopulation will have little or no immunity to new virus: - all or most people will not previously have had infection due to it- will not have been vaccinated against itLack of immunity allows virus to spread more rapidly and more widely than ‘ordinary’ flu viruses
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Antigenic drift and shiftDrift - 2003
From Influenza A (H3N2), Panama strainTo Influenza A (H3N2), Fujian strain
Shift - 1957 From Influenza A (H1N1) variantsTo Influenza A (H2N2) ‘Asian’ flu
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How antigenic shift can occur
Karl G Nicholson, John M Wood, Maria ZambonLancet 2003; 362: 1733-45
Respiratory ephitelial cell
Human virus Non-human virus
Reassortant virus
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Origin of Pandemic Influenza
Karl G Nicholson, John M Wood, Maria ZambonLancet 2003; 362: 1733-45
Migratory water birdsH 1-15
N 1-9
Domestic pig
Domestic birds
?
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Migratory water birds
Pandemic strainreassortment in pig
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Pandemic strainReassortment in humans
Migratory water birds