using openurl, open source and dois for intelligent ... · using openurl, open source and dois for...
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Using OpenURL, Open Source and DOIs for Intelligent Linking ServicesUsing OpenURL, Open Source and Using OpenURL, Open Source and
DOIs for Intelligent Linking ServicesDOIs for Intelligent Linking Services
Cecilia HuiRichard JohnsonChrissie Noonan
Hanford Technical Library, PNNL
InterLab 2005InterLab 2005InterLab 2005
PNNL-SA-47741
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Increasing use of electronic products in libraries, especially online journals
Increasing use of electronic products in Increasing use of electronic products in libraries, especially online journalslibraries, especially online journals
We need to:Link resources in a meaningful wayOptimize the accessibility and use of resources
The goal:Provide seamless and intelligent navigation between library resources
Our solution:Use of a link server or link resolverSFX by Ex LibrisAdditional functionality with other vendors
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What is OpenURL? What is SFX?What is OpenURL? What is SFX?What is OpenURL? What is SFX?Brief history of OpenURL and SFX development
Open URL 0.1 and 1.0
ANSI/NISO Z39.88 2004Backwards compatibility
What does OpenURL-enabled mean for the library user?
Vendor and publisher increased use of the standard
Solves the “appropriate copy” problem
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Anatomy of an OpenURL Anatomy of an OpenURL Anatomy of an OpenURL
OpenURL 0.1http://openurl.proquest.com/in?service=pq&issn=0040781X&volume=157&
issue=5&spage=33
OpenURL 1.0http://gateway.proquest.com/openurl?ctx_ver=Z39.88-
2004&res_id=xri:pqd&rft_val_fmt=ori/fmt:kev:mtx:journal&genre=article&jtitle=Lancet&issn=0140-6736&atitle=Models of Malaria&date=2003-03-08&volume=361&issue=9360
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Smart Linking with SFXSmart Linking with SFXSmart Linking with SFX
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SFX SFX –– an independent link serveran independent link server
A&I
e-print
Full Text
Portal
Citations Web FormDoc DeleTOC
OPAC Link Server
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Project Planning IProject Planning IProject Planning I
In 20032-day on-site training from Ex LibrisFactors to consider
InternalExternalASP (Application Service Provider)Who has access to SFX?
PNNLHanford Site StaffBechtel Hanford (now Washington Closure Hanford)Public library workstations
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Project Planning IIProject Planning IIProject Planning II
Talked with Sandia National Laboratory SFX implementation team for adviceTalked with PNNL network group for advice
Port issuesFirewall issues
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Final DecisionFinal DecisionFinal Decision
Extranet and outside of PNL domainNumerous testsSeveral revisions of Server Security PlanOpen firewall for accessLaunched Version 2 on Oct. 1, 2003Launched Version 3 on Dec. 8, 2005
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SFX applicationSFX applicationSFX application
RedHat Linux Enterprise ES 3.0All under /exlibris file system
MySQL [v. 4.1.8]Apache Web server [v. 2.0.50]Perl [v. 5.8.5]
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SFX Package –standard installationSFX Package SFX Package ––standard installationstandard installation
sfxlcl3app
MySQL
data
sfxglb3 sfxtst3
sfx_version_3
sfx_ver
symbolic link
sfxglb3 sfxlcl3 sfxtst3
exlibris
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sfxglb3app
sfxtst3
exlibris
libadmin logshomefilesdbsconfigcgi
backup_scripts
aztools
category
sfxadmin
public target
sqltab
scratch
parsers apache
startup_scripts
templates
reports
citation
sfxmenu
a-z
perlmysql utilsapache
sfxlcl3
base_export
curr_export
core
ah mh ph
ds
tp,sp,td
tm
diagnostics
server_admin_util
sfx_ver
sfx_version_3
source
e-collection-html
cv
sx
cnda
css
img
symbolic links
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KBupdatesKBupdatesKBupdates
KnowledgeBase UpdateProvided by Ex Libris monthlyIncludes:
latest journal holding informationbug fixes
Requires front-end configurationManual update because of firewall restriction
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SFX menu configurationSFX menu configurationSFX menu configuration
header.gif
banner.tmpl
ico_go.gif
sfxmenu.tmpl:
tl_sfx.gif
grouping_yes.tmpl
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Testing and Menu ConfigurationTesting and Menu ConfigurationTesting and Menu Configuration
3 vendors allowed test accountsMenu Customization
24 subscribed databases OpenURL enabledLink to FAQs and Help FileCurrent Menu options include:
Link direct to full textLink to library catalogLink to other local catalogs (4)Link to DOI (launched with CrossRef implementation 2003)Link to ILL/Document delivery formLink to Google Scholar (launched 2005)
Menu options differ by IP Institute
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Cambridge Scientific AbstractsCambridge Scientific AbstractsCambridge Scientific Abstracts
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Cambridge Scientific AbstractsCambridge Scientific AbstractsCambridge Scientific Abstracts
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CrossRef Implementation (2003)CrossRef Implementation (2003)CrossRef Implementation (2003)
Library Affiliate MemberCrossRef provides technology infrastructure for linking based on using the DOI. It enables linking to and fromspecific journals. It holds no full text content.Use CrossRef as a source of metadata to enhance OpenURL-based local link resolvers:
Use the DOI look-up to resolve a citation http://dx.doi.orgUse the DOIs found as a reference citation in a journal and access the cited article
In order for CrossRef to function properly with SFX, thereby resolving to the “local copy,” the user needs to place a cookie on his/her computer.
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Anatomy of a DOIAnatomy of a DOIAnatomy of a DOI
DOI stands for Digital Object Identifier - it is analogous to the UPC bar code for physical objects
It is an alphanumeric string created to uniquely identify/name a piece of electronic content, and to serve as a stable and persistent link to that content’s location on the WWW.
Anatomy of a DOIhttp://dx.doi.org/10.1099/mic.0.C0117-0
DOI Directory Prefix Suffix
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DOIs are everywhereDOIs are everywhereDOIs are everywhere
Print journal articlesOnline Table of ContentsOnline Full-textE-first publishingOnline Reference CitationsPubMedGoogle
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CrossRef/DOI LinkingCrossRef/DOI LinkingCrossRef/DOI Linking
Handle SystemDOI
Resolver
dx.doi.org
Repository
Cited Item
DOI10.1000/123
Citation with DOI link
CLICK
10.1000/123
http://abc.publisher/page2http://abc.publisher/page2
Full text ?
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Getting the CookieGetting the CookieGetting the Cookie
http://www.doi.org/cgihttp://www.doi.org/cgi--bin/pushcookie.cgi?BASEbin/pushcookie.cgi?BASE--URL=http://sfx.pnl.gov:9003/sfx_local&Redirect=https://library.pURL=http://sfx.pnl.gov:9003/sfx_local&Redirect=https://library.pnl.gov/datanl.gov/databases.asp?bases.asp?
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OpenURL Aware
OpenURL Complements CrossRef
References
DOI Server
ServerDOI
OpenURL
Metadata
DOI link
http://sfxservername/? doi=10.1034/j.1399-0039.2000.560502.x
http://dx.doi.org/ doi=10.1034/j.1399-0039.2000.560502.x
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Extending Linking OptionsExtending Linking OptionsExtending Linking Options
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ChemPORT Implementation (2004)ChemPORTChemPORT Implementation (2004)Implementation (2004)ChemPORT can be customized as an in-house link service allowing users to link directly from a CAS or STN record to the full text of the article (if available) and to other supporting resources and services using SFX. It is available to registered users and active account holders of SciFinder and STN.
SciFinder is an end-user service that gives researchers direct access to scientific literature and patent references published in Chemical Abstracts.
STN offers current and archival information from over 200 scientific, technical, business, and patent databases STN is a full-featured service designed for searchers who are familiar with using a command language to search online databases.
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SciFinder ChemPORT configurationSciFinder ChemPORT configurationSciFinder ChemPORT configuration
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STN ChemPORT configurationSTN ChemPORT configurationSTN ChemPORT configuration
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PubMed and LinkOut (2005)PubMed and PubMed and LinkOutLinkOut (2005)(2005)
PubMed, a service of the National Library of Medicine, includes over 15 million citations for biomedical articles back to the 1950s. Linking options
Outside Tool (direct linking using SFX)LinkOut (load holdings then link via SFX)
LinkOut provides users with links from PubMed to a wide variety of relevant web-accessible online resources, including full-text publications.Must be user configured
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PubMed MyNCBI configurationPubMed PubMed MyNCBIMyNCBI configurationconfiguration
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Linking SFX and PubMedLinking SFX and Linking SFX and PubMedPubMed
JournalsPubMed indexes over 18,000 journalsLibrary has access to over 9,000 journalsResulting in 2,500 journals that we both carry
PubMed HTL
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PubMed’s List of JournalsPubMedPubMed’’ss List of JournalsList of Journals
Text file of journals indexed by PubMed is generated daily
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Problems with PubMed’s LinkOutProblems with Problems with PubMedPubMed’’ss LinkOutLinkOut
XML file generated by SFX for submission to PubMedIncludes the ISSN/ESSN and years that we have access to
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Problems with PubMed’s LinkOutProblems with Problems with PubMedPubMed’’ss LinkOutLinkOut
Multiple sources for the same journalTwo different lines with same ISSN and different dates (holdings)
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SolutionSolutionSolution
Generate Python script in houseNeeds to…
Generate list of journals that PubMed indexes and library subscribes to onlineFix dates in this list so that only one range of dates is listed in the given fileDeal with other problem entries
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Benefits of Intelligent LinkingBenefits of Intelligent LinkingBenefits of Intelligent LinkingLibrary benefits:
User navigation to the article level leads to increased usage ofelectronic resourcesControl of who sees what (based on IP)Usage statistics analysis aids in understanding user behavior and user needs
User benefits:Full-text linking from A&I databases saves timeLinking to the “appropriate copy” saves moneyILL form, DOI (CrossRef linking) and Google Scholar links extend access to content not owned by the library
Use of standards increases the availability and accessibility ofinformation and enables interoperability among computing systemsusing different formats and structures.
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Current and Future ApplicationsCurrent and Future ApplicationsCurrent and Future ApplicationsOpenURL
Personalization i.e., MySFXExtending beyond traditional “scholarly communities” - Shopping carts, maps, peopleMoving beyond bibliographic linking - Digital Library environment: repositories and complex digital objectsUse of COINS - Encodes meta-data in HTML page so OpenURLplug-in can create OpenURL from it
DOIsOSTI assigning DOIs to technical reportsScientific community assigning DOIs to scientific datasetsRegistration of additional content types (graphs, tables, images, programs, audio and video files) as well as theses, dissertations, standards, and patents
OtherCrossRef Web Services and the Search Partner Program
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ResourcesResourcesResourcesEx Libris http://www.exlibrisgroup.com/CrossRef http://www.crossref.org/ChemPORT http://www.cas.org/chemport/PubMed http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmedLinkOut http://www.ncbi.nlm.nih.gov/entrez/linkout/OpenURL, ANSI/NISO Z39.88-2004 http://www.niso.org/standards/standard_detail.cfm?std_id=783DOI, ANSI/NISO Z39.84-2005 http://www.niso.org/standards/standard_detail.cfm?std_id=480OpenURL Theme Song, “Weapon of Choice”http://www.astralwerks.com/fbs/woc/
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ContactsContactsContactsCecilia Hui
Richard [email protected]
Chrissie [email protected]
Hanford Technical Library External Website http://libraryweb.pnl.gov