total synthesis of (+)-perophoramidine

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Bionano Chemistry Lab Muhammad Ehsan (Student ID 2013652616) Date: 2013-11-26

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Page 1: Total Synthesis of (+)-Perophoramidine

Bionano Chemistry Lab

Muhammad Ehsan(Student ID 2013652616)

Date: 2013-11-26

Page 2: Total Synthesis of (+)-Perophoramidine

dx.doi.org/10.1021/ja408336v | J. Am. Chem. Soc. 2013, 135, 14098−14101

(+)-

Philippine ascidian Perophora namei by

Ireland and co-workers resulted in the isolation of the

metabolite perophoramidine ,2002.

Page 3: Total Synthesis of (+)-Perophoramidine

(−)-Communesins and (+)-perophoramidine are two architecturally intriguing natural

products.

Contain a complex multiring system with two crucial vicinal all-carbon quaternary

stereocenters.

Page 4: Total Synthesis of (+)-Perophoramidine

The asymmetric assembly, especially in a catalytic fashion, of chiral all-carbon quaternary

stereogenic centers is one of the most challenging and dynamic research areas in modern

organic synthesis.

They present an enantioselective synthesis of indolenines 4 containing two vicinal all carbon

quaternary stereocenters.

Page 5: Total Synthesis of (+)-Perophoramidine

Optimization of the Reaction

3-substituted indole 1a

bromooxindole 2a

NH

N3

NH

Br N

OO

O

Ni

NRRNR2

R1

Page 6: Total Synthesis of (+)-Perophoramidine

Substrate Scopes

Page 7: Total Synthesis of (+)-Perophoramidine

Conversion to Ns-imide derivative

N

NPhth

Br

NH

OCl

NH

N Br

O

HN

Ns

1. NsCl, NaH, THF rt, 1 h

2. N2H4.H20

THF : MeOH = 1:1

Reflux, 2h

84%7

Cl

N3 N3

4p

N

NPhth

Br

N

OCl

N3

N

NPhth

Br

N-

OCl

N3

N

NPhth

Br

N

OCl

N3Ns

SCl

O

O

NO2H

H-

SCl

O

O

NO2

NsCl: 4-nitrobenzenesulfonyl chloride

Mechanism:

Page 8: Total Synthesis of (+)-Perophoramidine

Cascade Transamidation and Aminal formation

N

NH

Br

N

OCl

N3Ns

N2H4.2H2O

N

NH2

Br

N

OCl

N3Ns

N

BrHN

Cl

N3Ns

NH

O

N

BrHN

Cl

N3Ns

NH

O

NH

N Br

O

HN

Ns

Cl

O

O

N3

PhthalamideDeprotection

Transamidation

Aminal Formation

Page 9: Total Synthesis of (+)-Perophoramidine

Chlorination and Denosylation

NH

N Br

ClO

HN

Ns

1. NCS, AcOHrt, 2 h, 86%

2. K2CO3, PhSHDMF, rt, 12 h88%

N3

NH

NH

Br

ClO

HN

N3

Cl

O

O

N Cl

N N Br

ClO

HN

NH

N Br

ClO

HN

Ns

N3

ClH

O

O

N

Ns

NH

N Br

ClO

HN

N3

Cl NsNH

NH

Br

ClO

HN

N3

Cl

Deprotection

NCS: N-chlorosucinimide

N3

97

Mechanism:

Page 10: Total Synthesis of (+)-Perophoramidine

Denosylation Mechanism :

N S

O

O

NO2

SH S-K+

NHS S

O

O

NO2+

Page 11: Total Synthesis of (+)-Perophoramidine

Generation of pentacyclic compound

9

NH

NH

Br

Cl

Cl

HN

ON Ns

CH3

12

1. NaHMDS, NsClTHF 1h, 78%

2. PMe3, THF,

rt, 3h, 78%

3. CS2CO3, MeI, rt

CH3CN, 3h, 90%

NH

NH

Br

ClO

HN

N3

Cl

Mechanism:

Sodium bis(trimethylsilyl)amide

NaHMDS

O2N S

O

O

Cl

Staudinger Reaction

NH

NH

Br

Cl

Cl

HN

OHN Ns

H3C I

NH

NH

Br

Cl

Cl

HN

ON Ns

CH3

NH

NH

Br

ClO

N

N3

Cl

H

NH

NH

Br

ClO

N

N3

Cl

Ns

NH

NH

Br

ClO

N

H2N

Cl

Ns

12

Nosylation

Transamidation

N-methylation

N

Si

Si

Page 12: Total Synthesis of (+)-Perophoramidine

Staudinger Reaction:

Page 13: Total Synthesis of (+)-Perophoramidine

Oxidation of amine to imine

NH

NH

Br

Cl

Cl

HN

ON

Ns

CH3

12

NH

N Br

Cl

Cl

HN

ON Ns

14

PCC, CH2Cl2

rt, 1h, 71%

NH

NH

Cr

O

O

ClONH

N

NHCr

H

O

ClO

OH

H

N

NHH

Cr

O

OH

Cl

ON

NH

Mechanism:

Page 14: Total Synthesis of (+)-Perophoramidine

NH

N Br

Cl

Cl

HN

ON Ns

14

N N Br

Cl

Cl

NO

N Ns

Boc

Boc

15

Boc2O, DMAPEt3N, CH2Cl2

90%

O O

O

O

O

NO

O

N N

N

Mechanism:

HN

O

O

N-DMAP-H+

Boc- Protection

Boc: Di-t-butyl dicarbonate

DMAP: 4-dimethylaminopyridine

Page 15: Total Synthesis of (+)-Perophoramidine

N N Br

Cl

Cl

NO

N Ns

Boc

Boc

N NH

Br

Cl

Cl

HN

ON Ns

Boc

16

LiAlH4, THF,

- 20 OC, 20 min

61%

15

N N Br

Cl

Cl

NO

N Ns

Boc

Boc

H-

N NH

Br

Cl

Cl

HN

ON Ns

Boc

Reduction of amidine group

Mechanism:

Page 16: Total Synthesis of (+)-Perophoramidine

Conversion of amide into imidate group

NH

N Br

Cl

Cl

HN

ON Ns

16

NH

N Br

Cl

Cl

NOMe

N Ns

BocBoc

17

Me3OBF4, NaHCO3

rt, CH2Cl2, 2h, 87%

NH

N Br

Cl

Cl

HN

ON Ns

O

Me

Me

Me

BF4

NH

N Br

Cl

Cl

NOMe

N Ns

BocBoc

Mechanism:

Page 17: Total Synthesis of (+)-Perophoramidine

NH

N Br

Cl

Cl

NOMe

N Ns

Boc

17

NH

N Br

Cl

Cl

NMeN

(+) - PEROPHORAMIDINE

1. K2CO3, CS2CO3PhSH, DMF, 83%

2.HCl, PCCDioxane, 84%

Synthesis of target compound

Ns-deprotection/ denosylation

Boc-deprotection

One-pot oxidation

Page 18: Total Synthesis of (+)-Perophoramidine

NH

N Br

Cl

Cl

NOMe

NH

Boc

NH

N Br

Cl

Cl

N

Boc

MeN

NH

NH

Br

Cl

Cl

NMeN

NH

N Br

Cl

Cl

NMeN

(+) - PEROPHORAMIDINE

NH

N Br

Cl

Cl

NOMe

N Ns

Boc

Ns Deprotection

Boc Deprotection

OxidationPCC

O

O

NH+

Cl-

Page 19: Total Synthesis of (+)-Perophoramidine

Highly congested vicinal all-carbon quaternary stereocenters are generated

via catalytic asymmetric alkylation.

Total synthesis of (+)- perophoramidine using bromooxindole and 3-

substituted indole.

Key Chemistry Ni catalyzed alkylation

Conclusion: