thermo-tolerance of photosynthesis in legumes...depi (photoprotection) (photo-inhibition) feed the...

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Feed the Future Innovation Lab for Collaborative Research on Grain Legumes Thermo-tolerance of photosynthesis in legumes: Mapping QTLs for photosynthetic traits in cowpea under heat stress Presenter: Isaac Osei-Bonsu PhD Student MSU-Department of Plant Biology Plant Research Laboratory, Kramer Lab. (USA) CSIR-Crops Research Institute (Ghana)

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  • Feed the Future Innovation Lab for Collaborative

    Research on Grain Legumes

    Thermo-tolerance of photosynthesis in legumes: Mapping QTLs for photosynthetic traits in cowpea under heat stress

    Presenter: Isaac Osei-BonsuPhD Student

    MSU-Department of Plant BiologyPlant Research Laboratory, Kramer Lab. (USA)

    CSIR-Crops Research Institute (Ghana)

  • Feed the Future Innovation Lab for Collaborative Research on Grain Legumes

    Introduction

    • Global mean temperatures projected to rise by 0.3 oC – 4.8 oCby the end of 21st century (IPCC 2014).

    • World population estimated to reach > 9 billion by 2050• Heat stress tolerant crops would be needed to feed the

    population

  • Feed the Future Innovation Lab for Collaborative Research on Grain Legumes

    Why grain legumes and photosynthesis?

    • Photosynthesis is critical for crop productivity – Sensitive to high

    temperature (HT)

    • Grain legumes– Protein and income– Soil fertility

    improvement

  • Feed the Future Innovation Lab for Collaborative Research on Grain Legumes

    • Study photosynthesis in different legumes with differing tolerance to heat stress and establish mechanisms of tolerance of these legumes

    • Identify natural variation in photosynthesis under heat stress and map loci (QTLs) controlling such traits.

    Development of plants with robust photosynthesis under heat stress

  • Feed the Future Innovation Lab for Collaborative Research on Grain Legumes

    • Chlorophyll fluorescenceɸII ɸNPQ

    ɸNO

    – NPQt

    qEt qIt

    Photosynthetic parameters assayed

    SPAD/ Relative Chlorophyll Content

    MultispeQ

    DEPI

    (Photoprotection) (Photo-inhibition)

  • Feed the Future Innovation Lab for Collaborative Research on Grain Legumes

    Mapping of QTLs for photosynthetic traits under normal and heat stress conditions in cowpea by HTP phenotyping

    Germination and seedling establishment(11 days)

    Regular reach-in chamber

    0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17

    Acclimation + Phenotyping (1+5 days)

    DEPI chamber

    0

    200

    400

    600

    800

    1000

    1200

    8:00 9:00 10:00 11:00 12:00 13:00 14:00 15:00 16:00 17:00

    Ligh

    t int

    ensit

    y (µ

    mol

    phot

    ons m

    -2s-1

    )

    Time (h)

    Parents: CB27 x IT82E-18RIL population size: 87

    Treatments:Heat stress: 45/35 °C day/night Control: 30/20 °C

    RH: 15-40%

    Acclimation temperature: 33/20 °C

    Photoperiod: 10 h

    Light regime for experiment

  • Feed the Future Innovation Lab for Collaborative Research on Grain Legumes

    Photosynthetic efficiency (ɸII) under heat stress

    Day 1

    IT82E-18

    CB27

    Day 4

    Tolerant

    Sensitive

    Low High

  • Feed the Future Innovation Lab for Collaborative Research on Grain Legumes

    QTLs for Photosynthetic efficiency (ɸII) under heat stress and normal growth

    conditions

    Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr

    1 2 3 4 5 6 7 8 9 10 11Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr

    1 2 3 4 5 6 7 8 9 10 11

    ɸII 45/35 ° CDEPI

    Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr

    1 2 3 4 5 6 7 8 9 10 11

    ɸII 30/20 ° CDEPI

    Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr

    1 2 3 4 5 6 7 8 9 10 11

    ɸII 45/35 ° CMultispeQ

    ɸII 30/20 ° CMultispeQ

  • Feed the Future Innovation Lab for Collaborative Research on Grain Legumes

    Possible linkage between SPAD/ Relative Chlorophyll content, photoprotection (qEt) and biomass QTL

    SPAD45/35 °C

    Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr

    1 2 3 4 5 6 7 8 9 10 11

    Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr

    1 2 3 4 5 6 7 8 9 10 11

    SPAD | 30/20 °C

    qEt 45/35 °CBiomassChr Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr

    1 2 3 4 5 6 7 8 9 10 11 Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr1 2 3 4 5 6 7 8 9 10 11

  • Feed the Future Innovation Lab for Collaborative Research on Grain Legumes

    Correlation between Biomass, chlorophyll content and qEt

    0 61.9 0 1.80 1.4

    SPAD 45/35 °C Biomass qET (Photoprotection)

  • Feed the Future Innovation Lab for Collaborative Research on Grain Legumes

    Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr

    1 2 3 4 5 6 7 8 9 10 11

    Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr

    1 2 3 4 5 6 7 8 9 10 11

    qEt 45/35 ° C

    qIt 45/35 ° C

    Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr Chr

    1 2 3 4 5 6 7 8 9 10 11

    Pod & Seed yield

    Photoprotection(qEt) and photo-inhibition (qIt) QTLs may be

    controlled by the same locus as

    seed yield under heat stress

    PVE=12% Source: IT82E-18 (tolerant)

    PVE=21% Source: CB27 (tolerant)

  • Feed the Future Innovation Lab for Collaborative Research on Grain Legumes

    • QTLs for photosynthetic traits under control and heat stress environments have been identified in cowpea

    • QTLs for SPAD and photoprotection (qEt) map to the same loci as biomass under control and heat stress conditions

    • The balance between photoprotection and photo-inhibition may be controlled by the same region as seed yield under heat stress

    • Both DEPI and MultispeQ (PhotosynQ) are powerful phenotyping tools for photosynthetic traits and QTL mapping

    Take home message

  • Feed the Future Innovation Lab for Collaborative Research on Grain Legumes

    • Explore the possible connection between seed yield under heat stress and photo-protection and photo-inhibition

    • Identify genes within the QTLs that have been mapped

    • Determine mechanisms enabling tolerance of photosynthesis under heat stress in cowpea.

    Future directions

  • Feed the Future Innovation Lab for Collaborative Research on Grain Legumes

    AcknowledgementsKramer Lab members

    Dan TerAvestDonghee HohOliver TessmerDavid HallJeff CruzLinda SavageRobert Zegarac

    Collaborators (UC, Riverside)Dr. Philip A. RobertsDr. Bao-Lam HuynhDr. Timothy J. CloseDr. Maria Munoz-Amatrian

    Graduate Advisory Committee membersDr. David Kramer Dr. Christoph BenningDr. Wayne LoescherDr. Thomas SharkeyDr. Ousmane Boukar

    Thermo-tolerance of photosynthesis in legumes: Mapping QTLs for photosynthetic traits in cowpea under heat stressIntroductionWhy grain legumes and photosynthesis?Development of plants with robust photosynthesis under heat stressPhotosynthetic parameters assayedMapping of QTLs for photosynthetic traits under normal and heat stress conditions in cowpea by HTP phenotypingPhotosynthetic efficiency (ɸII) under heat stressQTLs for Photosynthetic efficiency (ɸII) under heat stress and normal growth conditions Possible linkage between SPAD/ Relative Chlorophyll content, photoprotection (qEt) and biomass QTLCorrelation between Biomass, chlorophyll content and qEtPhotoprotection (qEt) and photo-inhibition (qIt) QTLs may be controlled by the same locus as seed yield under heat stress Take home messageFuture directionsAcknowledgements