the characterizing and understanding the hiv reservoir for

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The Characterizing and Understanding the HIV Reservoir for Eradication (CURE) cohort: a new resource for understanding HIV persistence Natalie N. Kinloch 1,2* , Aniqa Shahid 1,2* , Bruce Ganase 1 , Hanwei Sudderuddin 1 , Delphine Duhirwe 1 , Aline Trevisan 1 , Zhong Dang 1 , F. Harrison Omondi 1,2 , Hesham Ali 3 , Chad Dickie 4 , Silvia Guillemi 1 , Mark Hull 1 , Mel Krajden 5 , Chanson J. Brumme 1,6 , Marianne Harris 1,6 , Mark A. Brockman 1,2 , Zabrina L. Brumme 1,2 (* shows co-first authors) 1 British Columbia Centre for Excellence in HIV/AIDS, Vancouver, British Columbia; 2 Faculty of Health Sciences, Simon Fraser University, Burnaby, British Columbia; 3 Positive Living Society of British Columbia, Vancouver, British Columbia; 4 AVI Health and Community Services, Victoria, British Columbia; 5 British Columbia Centre for Disease Control, Vancouver, British Columbia; 6 Department of Medicine, University of British Columbia, Vancouver, British Columbia Poster ID BSP6.04 Presenting author declaration: I have no conflicts of interest to declare Contact us at: [email protected], [email protected] 1 UNIVERSITY OF BRITISH COLUMBIA

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Page 1: The Characterizing and Understanding the HIV Reservoir for

TheCharacterizingandUnderstandingtheHIVReservoirforEradication (CURE)cohort:anewresourceforunderstandingHIVpersistence

NatalieN.Kinloch1,2*,AniqaShahid1,2*,BruceGanase1,Hanwei Sudderuddin1,DelphineDuhirwe1,AlineTrevisan1,Zhong Dang1,F.HarrisonOmondi1,2,Hesham Ali3,ChadDickie4,SilviaGuillemi1,MarkHull1,MelKrajden5,ChansonJ.Brumme1,6,Marianne

Harris1,6,MarkA.Brockman1,2,Zabrina L.Brumme1,2(*showsco-firstauthors)

1BritishColumbiaCentreforExcellenceinHIV/AIDS,Vancouver,BritishColumbia;2FacultyofHealthSciences,SimonFraserUniversity,Burnaby,BritishColumbia;3PositiveLivingSocietyofBritishColumbia,Vancouver,BritishColumbia;4AVIHealthandCommunityServices,Victoria,BritishColumbia;5BritishColumbiaCentreforDisease

Control,Vancouver,BritishColumbia;6DepartmentofMedicine,UniversityofBritishColumbia,Vancouver,BritishColumbia

Poster ID BSP6.04

Presentingauthordeclaration:Ihavenoconflictsofinteresttodeclare

Contactusat:[email protected],[email protected]

1UNIVERSITYOFBRITISHCOLUMBIA

Page 2: The Characterizing and Understanding the HIV Reservoir for

• ThedevelopmentofeffectiveHIVremissionorcurestrategieswillrequireadeeperunderstandingofinter-individualvariationinHIVreservoirsizeandcomposition.

• Tothisend,wehaveestablishedtheCharacterizingandUnderstandingtheHIVReservoirforEradication (CURE)cohortcomprisingindividualslivingwithHIVonlong-termcART.

Inthisposter,wedescribeCUREandexploreassociationsbetweenclinicalhistoryandlatentHIVreservoirsize.

2

BACKGROUND

Page 3: The Characterizing and Understanding the HIV Reservoir for

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METHODSParticipantrecruitmentand

informedconsentPBMCisolationBlooddraw(450mL) CD4isolationfromPBMCs

GenomicDNAextraction

QuantificationoftotalandintactlatentreservoirusingIntactProviral DNAassayviadropletdigitalPCR(ddPCR)forN=14 CUREparticipants

Ψflu

orescence

KinlochNetal,unpublished

Page 4: The Characterizing and Understanding the HIV Reservoir for

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RESULTS

Table1:CharacteristicsoftheCUREcohortParticipantsrecruitedsofar 31

Biological sex

Male 29

Female 2

Medianage(IQR) 57(48-63)years

HIVsubtype B

Median(IQR)estimateddurationofuncontrolledHIVinfection 7(2-15)years

Subsequentmedian(IQR) cART duration 13(9-20)years

Median(IQR)nadirCD4+ T-cellcount 280(120-630)cells/mm3

Median(IQR)archivedpre-cART plasmaavailable 5(2-16)samples/participant

Page 5: The Characterizing and Understanding the HIV Reservoir for

• CUREisanewCanadianHIVcohort,comprisingindividualswithdiverseclinicalhistories,includingthosetreatedinearlyinfectionandlong-termHIVsurvivors,willadvanceourunderstandingofHIVpersistence.

• TheavailabilityofarchivedplasmaspecimenswillallowustoinvestigatethereservoirdiversityinthecontextofHIV'swithin-hostevolutionaryhistory. 5

0 1000 2000 3000 4000 50000

100

200

300

400Spearman's rho = 0.77p-value=0.001

Total HIV reservoir size

Gene

ticall

y in

tact

HIV

rese

rvoi

r size

Figure1:LatentHIVreservoirsizeoftheCUREparticipants

RESULTSFigure2:Positivecorrelationbetweentotalandintactreservoir

CONCLUSION

Nosignificantcorrelationsobservedbetweenuncontrolledinfectionduration,cART duration,nadirCD4count,andreservoirsize.

Total reservoir Defective reservoir Genetically intact reservoir0

200

400

6001000

2000

3000

4000

5000

HIV

Co

pie

s/m

illio

n C

D4+

T-c

ells

(N=14)