studying interactions between protein, small molecules and...

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Studying Interactions between Protein, Small Molecules and Water by DSC

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Page 1: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

Studying Interactions between Protein, Small Molecules and Water by DSC

Page 2: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

Recent DSC work – interaction of small molecules with proteins

Differential scanning calorimetry scans of lysozyme with varying

sodium phytate concentrations in 10mM NaCl, pH 7.0.

2

Page 3: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

The Effect of the Anions Phosphate, Sulphate and Chloride on 1 mg/ml Lysozyme

pH 7

Binding of anions to proteins effect on stability does not follow the

Hofmeister series

(mM)

Page 4: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

At higher anion concentrations there are two distinct phases of stabilisation

4

Sodium Chloride

Page 5: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

5

At higher anion concentrations there are two distinct phases of stabilisation

Disodium Sulphate

Page 6: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

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At higher anion concentrations there are two distinct phases of stabilisation

Disodium Hydrogen Phosphate

Page 7: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

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Sodium Iodide

Sodium Perchlorate

Low charge density ions behave like detergents

Page 8: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

Current theory of stabilisation

+ve

Anionic

molecule -

High charge density ions bind to the

protein’s basic side chains by

electrostatic interaction. Alteration of

the charge results in a change in force

applied to the peptide backbone.

Mechanism 1. Strong direct interaction of anions with opposite

charged side chains

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Page 9: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

Current theory of stabilisation

Anionic

molecule -

Anions interact with the protein’s

backbone by electrostatic

interaction – has a weak effect on

stability

Mechanism 2. Weak direct interaction of anions with partially

charged peptide backbone

9

Page 10: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

10

Current theory of stabilisation

Mechanism 3. Competition for water

between the solvation layers of the

protein and the ions

Page 11: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

Mechanism 4. Wetting agent or detergent-like mechanism

Low charge density ions reduce the

free energy required to wet the

newly exposed hydrophobic interior

of the protein.

ΔΔGsolv layer

+ve

Chaotropic anions or

charged organic molecule

11

Current theory of stabilisation

Sodium Iodide

Sodium Perchlorate

Page 12: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

Reality – multiple mechanisms may occur concurrently

• Direct strong interaction

• Competition for water

+ve

Phosphate

12

Current theory of stabilisation

Page 13: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

13

Arginine – a widely used excipient in

bio-pharmaceutical formulations

Page 14: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

14

Glycine

Guanidinium HCl

Arginine – a widely used excipient in

bio-pharmaceutical formulations

Page 15: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

15

Arginine – a widely used excipient in

bio-pharmaceutical formulations

Arginine

Page 16: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

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Arginine – a widely used excipient in

bio-pharmaceutical formulations

Glycine

Page 17: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

17

Arginine – a widely used excipient in

bio-pharmaceutical formulations

Guanidinium HCl

Page 18: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

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Arginine – a widely used excipient in

bio-pharmaceutical formulations

Glycine

Guanidinium HCl

Arginine

Page 19: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

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Glycine

Guanidinium HCl

Arginine – an excipient that could have

been reverse engineered

Mechanism 2 & 3

Mechanism 4

Page 20: Studying Interactions between Protein, Small Molecules and ...register.tainstruments.com/2014-Biomolecular/pdf/... · molecule -High charge density ions bind to the protein’s basic

Goals

• Better understand the role of small molecules in protein stability

• Challenge existing theories on the interaction between water and

cosolutes (small inorganic, organic and macromolecules)