schedule1 nmd dbase programme
TRANSCRIPT
December 2012 1 Schedule 1 National Microbiological Database Programme
Prelims
Schedule 1 National Microbiological Database
Programme
Prelims
December 2012
Table of Contents
Prelims ...................................................................................................................... 1
1. Administration and Participation ................................................................. 6
1.1 Species to which the National Microbiological Database
Programme Applies ............................................................................... 6
1.2 Participation........................................................................................... 7
1.3 NMD Administration .............................................................................. 7
1.4 Health of Personnel ............................................................................... 8
1.5 Training of Samplers ............................................................................. 8
1.6 NMD analyses ....................................................................................... 8
2. NMD Sampling Requirements - Red Meat and Poultry .............................. 9
2.1 Products sampled ................................................................................. 9
2.2 Number of samples per week ............................................................... 9
2.3 Summary Table ...................................................................................13
2.4 Post Chill Carcass Sampling Programme ...........................................14
2.5 Salmonella Sampling Programme ......................................................14
2.6 Poultry Campylobacter Sampling Programme ....................................17
2.7 Sampling Location within the Process ................................................17
2.8 Carcass Sample Sites .........................................................................23
2.9 Analysis Required ...............................................................................37
2.10 Summary .............................................................................................38
2.11 Weekly Sampling Plan for Red Meat – Random Rotational Sampling40
2.12 Poultry Broiler Sampling Requirements ..............................................46
3. Sampling ......................................................................................................50
3.1 Manufacture of Diluents for Sampling and Analysis ...........................50
3.2 Templates Required for Swab Sampling ............................................52
3.3 Collection of Samples .........................................................................54
3.4 Sampling Method ................................................................................55
December 2012 2 Schedule 1 National Microbiological Database Programme
Prelims
3.5 Transportation of Samples to the Laboratory for All Species .............61
4. Laboratory Analysis ....................................................................................68
4.1 Dilutions Required ...............................................................................68
4.2 Duplicate Plating/Analytical Precision .................................................69
4.3 Preparation of Dilutions .......................................................................70
4.4 Preparation of Swab Samples for APC and E. coli Analysis ..............70
4.5 Preparation of Red Meat Separate Carcass Site Samples
Swabbed for Salmonella Analysis .......................................................71
4.6 Preparation of Bulk Meat (Whole Tissue) Samples for APC, E. coli ...72
4.7 Aerobic Plate Count, APC30 ................................................................72
4.8 Escherichia coli PetrifilmTM ..................................................................76
4.9 Salmonella ...........................................................................................77
4.10 Poultry Carcass Campylobacter Direct Plate Enumeration Method ...81
5. Results and Formulas .................................................................................86
5.1 Result Calculation (Manual) Red Meat ...............................................86
5.2 Result Calculation (Manual) Poultry ....................................................88
5.3 Result Calculation (Automated) ..........................................................89
5.4 Limits of Detection ...............................................................................89
5.5 Reporting of Results ............................................................................91
6. Targets – Premises Analysis and Interpretation, Independent
Verification .............................................................................................................93
6.1 Premises Level Targets ......................................................................93
6.2 Bovine Species NMT: Escherichia coli Moving Window ....................93
6.3 Bobby Calf NMT: Escherichia coli Moving Window ...........................94
6.4 Ovine NMT 95th Percentile m Limits: APC ..........................................96
6.5 NMT: Documentation and Record Keeping .......................................97
6.6 Ranked List .........................................................................................98
6.7 Salmonella Performance Standards (SPS) .......................................100
6.8 Poultry Campylobacter Performance Target (CPT) ..........................102
6.9 Verification Requirements .................................................................108
7. References .................................................................................................109
December 2012 3 Schedule 1 National Microbiological Database Programme
Prelims
Interpretation In this Schedule, unless the context otherwise requires,-
“alert” response means an immediate review of the process by an operator to identify and
document factors that may have compromised hygienic processing, and if appropriate, take
corrective and preventative action.
batch of samples means all the samples collected in one sampling period.
biosecurity (Campylobacter) means measures undertaken to prevent the introduction and
spread of Campylobacter into grower flocks.
birds means poultry broilers.
bobby calf means bovine calf that is at least 4 days old, generally unweaned and less than
45 kilograms dressed carcass weight.
bovine means beef, with 3 classes; bull, cow and prime.
broiler chicken means a male or female chicken kept primarily for meat production, but
does not include poussins.
bulk meat means bulk packed meat, not including IW cuts.
caprine means red meat species, goat.
carcass post slaughter and dressing means a red meat carcass after completion of
slaughter and dressing, after post-mortem inspection, prior to chiller entry at cold/warm
boning premises or just prior to quartering at hot-boning premises. For the purposes of NMD
post mortem inspection is considered to include removal of navel in bobby calves.
cervine means deer, with 2 classes defined for NMD; fallow and other (wapiti, red and
hybrid).
domestic premises means premises that supply the domestic market only.
dsBPW means double strength buffered peptone water.
equine means red meat species which includes horse, mules and donkeys.
extremes of temperature means, in relation to samples during collection and transport, less
than 0oC and greater than 25oC.
EU and US listed premises means premises that are listed for export to the EU and/or US
markets or premises supplying red meat to markets specifying EU and/or US.
farm means the location at which the poultry sheds are situated
HACCP means Hazard Analysis Critical Control Points.
initial item means is the first carcass, cut or bulk carton within the run to be sampled.
December 2012 4 Schedule 1 National Microbiological Database Programme
Prelims
initiation of analysis means
a. In relation to APC and E.coli analyses, from the time the sample is suspended and ready
for dilution; and
b. In relation to Salmonella analysis, the commencement of incubation of the BP
pre-enrichment.
ILCP means Inter-Laboratory Comparison Programme.
insulated container means a sample collection or transport container that is insulated.
IW cut means an individually wrapped cut.
MEGAREG means slang for US Pathogen Reduction HACCP Final Rule.
MIMM 2005 means Meat Industry Microbiological Methods, Edition Four, March 2005.
moving window means addition of 5 new samples to the bottom of the window to displace 5
samples from the top of the window.
NMT means National Microbiological Target.
non EU and non US premises means premises that do not export to EU and/or US, or any
markets specifying EU and/or US.
off-site laboratory means an independent consulting laboratory to which the operator of a
premises has appointed responsibility to enter results directly to NMD.
on-site laboratory means a laboratory facility located within the physical boundaries of a
premises.
ovine means species with 2 classes; sheep and lamb.
porcine means red meat species pig.
processing plant means poultry broiler slaughter house.
processing season means bovine, caprine, cervine, ovine, ostrich and emu, poultry, 1
October to 30 September or from the commencement of a short season such as bobby
calves, which may be before 1 October.
primal cuts means a primal cut from red meat carcass.
post chill carcass means carcass after chilling.
post slaughter and dressing carcass means a carcass after post mortem inspection of
carcasses. In the case of bobby calves after inspection, after the umbilicus/navel is removed
and prior to any further trimming.
PSW means a primary sampling window re Salmonella sampling programme.
RMP means a Risk Management Programme.
ssBPW means single strength buffered peptone water.
December 2012 5 Schedule 1 National Microbiological Database Programme
Prelims
shed means building purpose built for sustenance of a flock of poultry broilers.
SSW means secondary sampling window in relation to the Salmonella sampling programme.
sub-contracted Laboratory means where a premises has a LAS approved laboratory but
sub-contracts an off-site laboratory for specific analyses, the on-site laboratory may be sub-
contracted or seconded to train personnel to collect samples for the off-site laboratory.
TNTC means too numerous to count.
To means the time a poultry carcass takes to move from the point of selection on the chain to
the first drop point.
verifier means “official assurance verifier” which means a person accredited under section
103 of the Animal Products Act 1999 to undertake official assurance verification and includes
animal product officers employed by MPI.
VLT means very low throughput.
December 2012 6 Schedule 1 National Microbiological Database Programme
Administration and Participation
1. Administration and Participation
1.1 Species to which the National Microbiological Database Programme Applies
The species to which the NMD applies are bovine, ovine, bobby calf, caprine, cervine,
ostrich, emu, poultry and porcine. The NMD operates on the same principles for each
species with slight variations. A summary of the requirements for each species is listed
below in Table 1.
Note: If your premises is EU and/or US listed, whether or not you are exporting, you must
comply with the NMD programme for all species processed that are covered by the NMD
programme. If you are currently EU listed or US listed it is irrelevant whether the product is
going to an EU or US market that week, NMD sampling/analysis must be conducted each
processing week.
Domestic and export premises; even if not processing, a report to NMD is required to confirm
that there was no processing that week.
Table 1: Domestic and export application of NMD programme.
Species Domestic, non EU and non US Listed Premises
EU Listed Premises US Listed Premises
Bovine (excluding bobby calves)
Every processing week Every processing week Every processing week
Ovine Every processing week Every processing week Every processing week
Bobby Calves Every processing week Every processing week Every processing week
Caprine Every processing week Every processing week Every processing week
Cervine (farmed)
Every processing week Every processing week Currently no requirements for US. Domestic, non EU and non US or EU apply
Ostrich and emu Every processing week Every processing week Every processing week
Porcine Every processing week Exporting to the EU is prohibited unless prior notification is obtained from the Director General
Comply with the US Pathogen Reduction HACCP Final Rule. Must notify Director General of intentions
Poultry (broiler chickens)
Every processing week Exporting to the EU is prohibited unless prior notification is obtained from the Director General
Exporting to the US is prohibited
Ducks, geese and guineas
Not required Not required Exporting to the US is prohibited
Horses, mules, and other equines
Not required Not required Comply with the US Pathogen Reduction HACCP Final Rule. Must notify Director General of intentions.
December 2012 7 Schedule 1 National Microbiological Database Programme
Administration and Participation
Table 1: Domestic and export application of NMD programme (continued).
Species Domestic, non EU and non US Listed Premises
EU Listed Premises US Listed Premises
Wild game Not required Not required Wild games, excluding feral goats and pigs, can be exported to US. Not required
Game estate Not required Not required No negotiated entry requirements. Not required
1.2 Participation
All premises referred to in Table 1 must participate in the NMD programme as part of the
New Zealand standard. Once a premises is participating it is mandatory to comply with all
requirements of the NMD programme.
Premises may voluntarily participate in additional NMD programmes but if submitting results
to MPI must follow all requirements of the NMD.
The NMD sampling plan applies to all premises irrespective of throughput. Allowances are
made for premises classified as “VLT”; (see section 2.3 Table 2).
1.3 NMD Administration
On commencing participation in the NMD an operator must submit completed demographic
questionnaires to the NMD Administrator (these can be found on the MPI website).
If any of the following details change, the operator must inform the NMD Administrator within
7 working days of the change occurring.
a. name of premises;
b. name of plant manager and contact details: phone, cell phone and email;
c. address of premises, physical and postal;
d. name of NMD controller and contact details: phone, cell phone and email;
e. name of LAS approved laboratory conducting NMD analysis and coordinating the NMD
sampling programme;
f. name of the data submitter and whether this is a person employed by the premises or
the LAS approved laboratory conducting analysis;
g. species required to be sampled for NMD;
h. if species processed is VLT or standard throughput;
i. any process details as outlined on demographics questionnaire;
December 2012 8 Schedule 1 National Microbiological Database Programme
Administration and Participation
j. location and reference number for each farm and reference number for each shed for
which the operator processes poultry.
1.4 Health of Personnel
Personnel handling product for the NMD programme must comply with the specifications and
market access requirements for health of personnel, refer to Part 3 of the Animal Products
(Specifications for Products Intended for Human Consumption) Notice 2004.
1.5 Training of Samplers
All NMD sampling must be undertaken by persons trained and deemed competent for the
species being sampled. Persons who have attended an LAS approved sampling course
related to the species they will be sampling are collectively called “Certified Trainers”.
Certified trainers are qualified to select personnel who are technically competent and are
sufficiently familiar with the process associated with the species to be sampled, to be trained
as “Associate Trainers”. Both Certified and Associated Trainers may train others to sample.
Persons trained by Associate Trainers cannot train others. Samplers trained by Certified or
Associate Trainers who are not qualified to train others are referred to as “restricted
samplers”.
1.6 NMD analyses
All sample analysis must be performed in LAS approved laboratories. Modification or
substitution of methods is not permitted unless approved by LAS, and documented in LAS.
Each NMD analysis must be performed according to the method listed in section 4 of the this
Schedule. These analyses are based on those described in Meat Industry Microbiology
Methods Edition Four (MIMM 2005) or later edition, general procedures. NMD analyses
have been modified from those published in MIMM where appropriate, to reflect the specific
requirements of the NMD programme. Methods as written in NMD procedures for
application to the NMD programme take precedence over the MIMM 2005 or later edition.
As required under LAS all quality assurance functions and quality control procedures for
methods and media as per MIMM 2005 or later edition, Chapter 2 must be followed.
December 2012 9 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
2. NMD Sampling Requirements - Red Meat
and Poultry
2.1 Products sampled
Non EU and non US listed premises, including domestic premises must sample the
following:
• Bobby Calves and Caprine: all product types (fresh carcasses, primal cuts and bulk
meat) processed under their RMP
• Bovine (excluding bobby calves), Ovine, Ostrich and Emu: fresh carcasses
• Poultry broiler: fresh carcasses
• Cervine: fresh carcasses and primal cuts
• Porcine: fresh carcasses.
EU and US listed premises must sample the following:
• Bovine (excluding bobby calves), Bobby Calves and Caprine: all products types
(carcasses, primal cuts and bulk meat) processed under their RMP
• Ovine, Ostrich and Emu: fresh carcasses only
• Cervine: fresh carcasses and primal cuts
2.2 Number of samples per week
The number of samples is dependant on:
• whether the product is for the domestic market, non EU and non US markets or to
be exported to EU and/or US; and
• the species processed; and
• whether the species to be sampled is classified as standard throughput or VLT; and
• the type of analyses required.
(Refer also to section 2.3 Summary, Table 2: Number of samples required per week).
2.2.1 VLT provisions for domestic only and non EU and/or non US Iisted premises
These VLT provisions
• do not apply to ovine and porcine species; and
December 2012 10 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
• apply to premises that process product destined only for the local market and/or
markets other than EU and US or any markets specifying EU and US; and
• apply to bovine (excluding bobby calf) premises which process product destined only
for local markets and/or markets other than EU and US or any other markets
specifying EU and US, regardless of throughput.
Domestic only and non EU and/or non US listed red meat premises processing bovine as
above must sample:
• one fresh carcass each week of processing, starting from the first week of operation
and continuing for at least 16 processing weeks:
• where a VLT processing season is less than 16 weeks, the number of samples
collected per product per week must be increased to ensure that 16 samples are
collected within a season (for example an 8 week season would require collection of
2 samples per week for 8 weeks).
VLT premises for bobby calf and/or caprine are premises which process product destined
only for local markets and/or markets other than EU and US or any other markets
specifying EU and US and have a throughput of less than 400 bobby calf/caprine animals
in each processing week throughout the season.
Domestic only and non EU and/or non US listed premises processing bobby calf and/or
caprine qualifying as VLT premises must sample as follows:
• from the first week or part week of operation, including short seasonal operations or
where processing is intermittent, sampling of one of each product type (fresh
carcasses, primal cuts and bulk) must be conducted each processing week or part
week for at least 16 weeks or, if the number of processing weeks in the season is
less than 16 weeks, conducted each processing week or part week; or
• if at any time during the current season the weekly bobby calf and/or caprine
throughput exceeds 400 animals in a processing week, sampling of five samples of
each product type (fresh carcasses, primal cuts and bulk) each processing week is
required.
VLT premises for cervine species are defined as those that slaughter or cut/bone product
from 100 cervine animals or less per week (this is based on throughput over a whole
season). If at any time during the current season the weekly cervine throughput exceeds
100 cervine animals, cervine sampling must revert to standard throughput requirements.
Premises qualifying as VLT for cervine species must sample as follows:
• one of each of the following product types; fresh carcasses and primal cuts each
week of processing, starting at the first full week of operation within a season, and
continuing for at least 16 processing weeks:
December 2012 11 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
• where a VLT processing season is less that 16 weeks, the number of samples
collected per product per week must be increased to ensure that 16 sampled are
collected within a season (for example an 8 week season would require collecting on
2 samples per week for 8 weeks).
2.2.2 VLT for EU and US listed premises processing bobby calf, bovine, cervine and caprine
VLT premises are defined as those that slaughter or cut/bone product from 100
bovine/cervine animals or less, and/or 400 bobby calf/caprine animals or less per week (this
is based on throughput over a whole season).
If at any time during the season the weekly throughput exceeds the VLT limit, samples must
be collected at the standard rate for the remainder of the season.
Premises qualifying as VLT for a given bobby calf, bovine, caprine or cervine species or
product type of one of those species must sample as follows:
• at least one item of each product each week of processing, starting at the first full
week of operation within a season, and continuing for at least 16 processing weeks:
• where a VLT processing season is less than 16 weeks, the number of samples
collected per product per week shall be increased to ensure that 16 samples are
collected within a season (for example an 8 week season would require collection of
2 samples per week for 8 weeks).
2.2.3 Discontinuing VLT sampling
These VLT provisions do not apply to porcine and ovine. The following are the only
circumstances when VLT sampling may be discontinued:
• Bovine/bobby calf: These species have National Microbiological Targets (NMTs),
see sections 6.2.1 NMT (bovine species): Escherichia coli moving window (m) and
6.2.4 Bobby calf NMT 80th percentile m limits: Escherichia coli re limits specified for
E. coli. So, in addition to the above 16 week requirement, NMD sampling at the
required rate may only be discontinued after E. coli moving window of 15
consecutive samples that does not elicit an “m alert”, is completed:
• VLT premises processing cervine and caprine may discontinue weekly testing of a
product type after 16 samples of that product type have been collected.
VLT premises processing bobby calf, bovine, caprine and cervine may continue to sample as
per NMD requirements throughout the season if they wish. The NMD Administrator will
continue to accept results.
December 2012 12 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
2.2.4 Recommencing VLT sampling
The VLT sampling requirements above/in section 2 are to be recommenced each season
(which usually commences on 1st October) or whenever the process is changed such that
new process conditions could affect microbiological outcomes.
2.2.5 VLT for porcine premises
VLT porcine premises are defined as those that slaughter product from 10,000 pigs or fewer
per annum.
Porcine premises qualifying as VLT must sample at least one carcass each week or part
week of processing for analyses required.
2.2.6 VLT for poultry premises
VLT poultry premises are defined as those that slaughter product from one million
(1,000,000) birds or fewer per annum.
Poultry premises qualifying as VLT for carcasses must sample at least three carcasses each
week or part week of processing for analyses required.
December 2012 13 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
2.3 Summary Table
Table 2: Number of samples required per week
Species Product type
Technique Domestic and non EU and non US listed
EU and US listed standard throughput
EU and US listed VLT
Bovine Carcass Multiple Swab Technique
1 per week 5 per week 1 per week
Primal Cuts Multiple Swab Technique
Not required 5 per week 1 per week
Bulk Meat Product
Whole Tissue Composite Sampling
Not required 5 per week 1 per week
Post Chill Carcass
Multiple Swab Technique
Not required 5 per week for 6 weeks
1 per week for 6 weeks
Ovine Carcass Multiple Swab Technique
5 per week 5 per week Not applicable
Porcine Carcass Multiple Swab Technique
5 per week; VLT 1 per week
Bobby Calf and Caprine
Carcass Multiple Swab Technique
5 per week VLT: 1 per week for 16 weeks
5 per week 1 per week
Primal Cuts Multiple Swab Technique
5 per week VLT: 1 per week for 16 weeks
5 per week 1 per week
Bulk Meat product
Whole Tissue Composite Sampling
5 per week VLT: 1 per week for 16 weeks
5 per week 1 per week
Post Chill Carcass
Multiple Swab Technique
Not required 5 per week for 6 weeks
1 per week for 6 weeks
Cervine Carcass Multiple Swab Technique
3 per week VLT: 1 per week
3 per week 1 per week
Primal Cuts Multiple Swab Technique
2 per week VLT: 1 per week
2 per week 1 per week
Ostrich/Emu Carcass Multiple Swab Technique
1 per week 2 per week Not applicable
December 2012 14 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
Table 2 continued: Number of samples required per week
Species Product type
Technique Domestic and non EU and non US listed
EU and US listed standard throughput
EU and US listed VLT
Poultry Carcass Whole Carcass Rinse Method
3 per day VLT: 3 per week
Not applicable Not applicable
2.4 Post Chill Carcass Sampling Programme
Post chill carcass sampling is only required for bovine, bobby calf, and caprine species for
EU and US listed premises.
• Post chill carcass sampling must be commenced on starting the NMD programme
and then be undertaken annually at the start of the season.
• Post chill carcass sampling is required when the chiller operating conditions changes
significantly (calibration). The season is classified as beginning at 1st October or the
commencement of a short season such as bobby calves, which may be before 1st
October.
• Post chill carcass sampling provides a microbiological profile of chillers at normal
operating capacity for the particular species being tested.
• Post chill carcass sampling is required until 30 carcasses (at 5 carcasses per week
for 6 consecutive processing weeks) have been monitored. If sampling takes more
than 6 weeks it must be justified (for example, chiller capacity being lower than the
normal for the species, multiple species and concurrent Salmonella sampling
obligations exceeding laboratory capability for the sample collection and/or analysis).
• Post chill carcass sampling must be rotated on a weekly basis around the chillers, to
a maximum of 6 chillers (5 samples per chiller) during each annual period.
• Premises that qualify as VLT for bovine, bobby calf and/or caprine species are
required to have one post chill carcass sample per week for 6 weeks for each
season.
2.5 Salmonella Sampling Programme
There is a performance standard for Salmonella sampling for all products (excluding chilled
carcasses) from the following species:
• bovine
December 2012 15 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
• bobby calf
• caprine
• cervine
• ostrich/emu
• porcine (see section 2.5.2)
• poultry
(Note: Salmonella testing is not required on ovine species).
Salmonella sampling and performance standards are split into three groups:
Table 3: Salmonella groups
Group 1 – Salmonella Group 2 – Salmonella Group 3 – Salmonella
Bovine Bobby calf Caprine Cervine
Ostrich/Emu Porcine
Poultry
2.5.1 Group 1 (bovine, bobby calf, caprine, cervine) – seasonal Salmonella
Seasonal Salmonella sampling is required for each product type processed. The processing
season for bovine, caprine, and cervine is 1st October – 30th September. For bobby calves
the processing season is taken from the commencement of bobby calf processing during the
calendar year 1st January– 31st December.
An initial “primary sampling window” (PSW) of 16 consecutive weeks, within a processing
season must be conducted. Where a premises processing season is shorter than 16 weeks
the PSW carries over to the subsequent processing season.
A premises that has not detected Salmonella in a given product type of a given species in
the preceding PSW must test product for the initial six consecutive processing weeks of the
next season. (See Figure 1). This reduced sampling frequency is defined as a “secondary
sampling window” (SSW).
Where a premises doesn’t complete either a PSW or SSW in their processing season, this
then carries over to the new processing season. The carried over PSW or SSW does not
displace the new processing season requirement. The new seasonal Salmonella sampling
must commence on the completion of the carried over one. Examples:
• A bobby calf processing season, usually starting between March and August, might
commence with PSW15; indicating a carry over from the previous season. In the first
week of the new season the PSW of the previous season would be complete at
PSW16 (providing no Salmonella detection occurs). The processor is then required
to start a secondary sampling window (SSW1) in the following week.
December 2012 16 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
• Where a SSW reads SSW2, SSW3, SSW4, SSW5 or SSW6 at the beginning of a
new processing season this indicates an incomplete SSW from the previous season.
The full SSW of the previous season must be completed and the new season SSW1
must be started in the next processing week (providing no Salmonella detection
occurs).
A premises that detects Salmonella in a given product type of a given species during a PSW
or SSW must immediately begin another 16 week PSW for that species/product type. A
“sampling window” terminates on detection of Salmonella and week one of a new PSW
commences for that particular species/product type in the following processing week.
Figure 1: Salmonella sampling windows succession
Salmonella: detected (+) not detected (-)
• An operator who demonstrates to a verifier that Salmonella was not detected in
either a PSW or a SSW may, with approval of MPI VA, cease testing of that product
for the remainder of the processing season. Unless the PSW or SSW was carried
over from last season, where a SSW needs to be commenced for the current
processing season following completion of the carried over seasonal window.
Closures (seasonal or maintenance): An incomplete PSW or SSW carries over to the next
processing week following completion of maintenance.
Changes to process: A premises that is substantially modified in such a manner that it could
affect expected microbiological outcomes of the process must immediately begin a 16 week
PSW when processing recommences. Substantial modification includes:
• new premises under the same licence/registration number at the same or different
location; and
• major changes in processing methods (for example, change from traditional to
inverted dressing, installation of robotics, etc.) where changes in microbiological
performance are possible or probable.
December 2012 17 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
2.5.2 Group 2 (Ostrich/Emu and Porcine) - Salmonella
An operator must conduct ostrich/emu and porcine Salmonella sampling each processing
week.
Porcine Salmonella sampling is a 27 month programme which commenced week beginning
5 October 2009 and will cease on the week beginning 2 January 2012.
2.5.3 Group 3 (Poultry) – Salmonella
Poultry Salmonella sampling must be conducted by operators of;
• Standard throughput premises; each processing day
• Very Low Throughput premises; on one processing day of each processing week.
2.6 Poultry Campylobacter Sampling Programme
The Campylobacter sampling programme for poultry carcasses must be conducted by
operators of;
• Standard throughput premises; each processing day
• Very Low Throughput premises; on one processing day of each processing week.
2.7 Sampling Location within the Process
2.7.1 Red meat product selection
Refer to section 2.3 for products (carcasses post slaughter and dressing, post chill
carcasses, primal cuts and bulk meat) required to be sampled for each particular red meat
species NMD programme.
2.7.1.1 Carcasses post slaughter and dressing
NMD sampling for post slaughter and dressing aims is conducted to gain a representative
picture of microbiological contamination during the slaughter and dressing process.
Procedures that result in a significant transfer of microbes to the carcass are completed
before the post mortem inspection station. “Post slaughter and dressing” is defined, for the
purposes of NMD, as after post mortem inspection and after final dressing procedures
specified below.
The NMD sampling for post-slaughter and dressing is as follows:
• NMD sampling must commence as soon as is practical, but no later than 30 minutes
after post mortem inspection of carcasses.
• Carcasses detained by AsureQuality must not be sampled.
December 2012 18 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
• Carcasses must be sampled BEFORE any procedure that may impact on the NMD
carcass sampling sites. Processes following the post mortem inspection station may
redistribute contamination over a carcass, add some contamination by handling from
workers, or remove contamination due to particular process interventions. Such
procedures include carcass stacking (contact), gross hot trimming, carcass washing,
rail stimulation and worker contact during marshalling.
• In the case of bobby calves, samples are to be collected immediately after
inspection, after the navel is removed and prior to any further trimming.
• Positioning of carcass for sampling:
(i) Ovine, porcine, caprine and bobby calf carcasses can be moved to a dead rail for
sampling, or another suitable position that does not mask the microbiological
consequences of slaughter and dressing.
(ii) Bovine and cervine carcass sampling must be conducted on a moving rail (as
the carcass cannot be manually moved from the rail). This requires a greater level
of training to ensure sample collection is consistently from the correct sites, the
correct carcass side and with the correct sampling technique.
• The specified carcass sampling sites require wet/dry swab sampling. The sampling
sites will vary in location according to the species. The sites have been selected to
represent the points where microbes are most likely to be transferred to the carcass
during dressing procedures.
• Record the time of sampling, run, shift, species, class and process type; inverted,
traditional, gas de-pelted.
• Rotation of chains on a weekly basis in premises with multiple slaughter chains is
required.
2.7.1.2 Post chill carcasses
Post chill carcasses of cold and warm boning premises require wet/dry swab sampling. Refer
section 2.8.8. Post chill carcass sampling is not required for hot boning premises.
Cold and warm boning premises must sample the post chill carcass:
• no later than 24 hours after the onset of chilling; or
• when the chilling cycle is completed in less than 24 hours, at the completion of the
chilling cycle; and in either case
• in the chilling area itself prior to wrapping, transportation, freezing, boning or loadout.
Records must be taken of the:
• location of the chilled carcass at time of sampling; identifying the cooling floor,
chiller, side chiller, quarter chiller or other,
December 2012 19 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
• boning process (cold or warm), and
• number of hours chilled (timed from the onset of chilling).
2.7.1.3 Primal cuts and bulk meat product
Primal cuts and bulk meat product the microflora comprises organisms from two sources;
• those which remain attached to the carcass after the initial transfer during slaughter
and dressing; and
• those acquired by contact of the cut surfaces with other surfaces or materials (for
example condensate, aerosols) in the processing environment (cross
contamination).
Primal cuts and bulk meat manufactured at a premise, but from carcasses supplied by
another premises, shall be regarded as product of the boning premises.
Boning premises must record the premises of a carcass origin and enter that information in
the boning premises NMD report under the product description column of the NMD
database.
Only fresh product may be sampled for NMD (secondary processes and product that has
either been chilled in the carton, frozen or thawed from frozen is not required to be sampled
for NMD).
Primal cuts (cold, warm or hot boned, bone-in or bone-out).
Wet/dry swab samples must be taken from an outside (fell) surface of the cut, not an
exposed, freshly cut internal surface. The sampling site selected on the primal cut should
correspond to the equivalent carcass sampling site for the species concerned. Primal cut
samples are to be taken immediately prior to vacuum packaging, wrapping or bulk meat
packing into cartons.
• Bovine, bobby calf, caprine: hindquarter cuts or hindleg cuts
(refer Table 4).
• Venison: hindquarter cut (rump/topside) and forequarter cut (shank/shoulder). Removal of the silver skin (de-sinewing) of cuts is more commonly carried out in
venison further processing. Samplers must record whether the venison cuts
sampled are de-sinewed or intact.
December 2012 20 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
Table 4: Primal cut descriptors
Species Primal Cut Descriptor
Bobby Calf Hindleg Outside hindleg
Bovine ATS Bottom Round Eye of Round Flat Inside Outside Less Eye of Round Outside Round Outside Smalls SAT Silverside Topside
Caprine Hindleg
Cervine Sinew Intact – Hindquarter, rump Sinew Intact – Hindquarter, topside Sinew Intact – Hindquarter, outside Sinew Intact – Forequarter, shank Sinew Intact – Forequarter, shoulder Sinew Intact – Forequarter, shoulder shank on Sinew Intact – Forequarter, foreleg Sinew Intact – Forequarter, knuckle Desinewed – Hindquarter, rump Desinewed – Hindquarter, topside Desinewed – Hindquarter, outside Desinewed – Forequarter, shank Desinewed – Forequarter, shoulder Desinewed – Forequarter, shoulder shank on Desinewed – Forequarter, foreleg Desinewed – Forequarter, knuckle
Ovine No primal cut NMD required
Porcine No primal cut NMD required
Poultry No primal cut NMD required
Ratite No primal cut NMD required
December 2012 21 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
Figure 2: Beef carcass, location of cuts
The bovine primal cut descriptors are highlighted in yellow:
December 2012 22 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
Bulk meat and trim.
The micro organisms on the surface of bulk meat or trimmings will be distributed throughout
the carton. Bulk meat will eventually be ground into a homogenous comminuted product and
the original micro organisms will become evenly distributed throughout. Whole tissue
samples from the original bulk meat carton are expected to give a good representation of the
microflora. Boneless bulk meat product of 85-95 VL, not including individually wrapped (IW)
product, is to be selected for sampling. Where a premises does not produce boneless bulk
packed meat, cartons of trim in the 60-85VL range will be acceptable. Whole tissue samples
are to be taken from bulk meat product immediately prior to closing and strapping the full
carton before equilibration or freezing.
Table 5: Bulk meat pack descriptors
Species Bulk Product Descriptor
Bobby Calf Trim Trunk Veal Inside
Bovine Fores and Hinds Trim Shanks
Caprine Trim Trunks
Cervine No bulk NMD required
Ovine No bulk NMD required
Poultry No bulk NMD required
Porcine No bulk NMD required
Ratite No bulk NMD required
The time of sampling must be recorded (those conducting only further processing will enter
this time on the NMD data entry sheet), species, class, description of boning process (cold,
warm, hot) primal cut type, VL/CL grade percentage or estimate of and product description of
bulk.
Premises with multiple boning rooms must rotate sampling between boning rooms on a
weekly basis.
December 2012 23 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
2.7.2 Poultry carcasses selection
• Whole poultry carcasses are to be selected in order for the whole carcass rinse
method to be applied
• For premises where carcasses are mixed in bins at manual grading, immediately
prior to grading (for example off the drain-table, after draining)
• For premises where carcasses are re-hung on the chain after immersion chilling, or
are air chilled, the carcass must be selected immediately prior to the first drop point,
or similar, at which the carcasses enter secondary processing or are bagged for
retail.
Should the position at which the carcass is released from the chain not be readily accessible,
the carcasses for sampling may be selected:
• At the last readily accessible position on the chain or from the drain-rack. In order to
drain excess water, the carcasses must be hung prior to being sampled or “bagged
for shipment to the laboratory” for the same time (T0) as the carcass would take to
move from the point of selection to the first drop point.
Note: This time (T0) will vary at each premises, but is representative of “normal” processing
at that premises.
Carcasses for sampling must be handled aseptically for removal from the drain table or main
chain and for transfer into the sampling bag.
Figure 3: Selection of poultry carcass
2.8 Carcass Sample Sites
Individual samples are to be collected (ICMSF, 1986; MIRINZ, 1971) from the species
specific sites described below and illustrated in Figure 4 (bovine), Figure 5 (ovine and
caprine), Figure 6 (bobby calf), Figure 7 (cervine – traditional), Figure 8 (cervine – inverted),
Grading
T0
Immersion chill
Drain table or
re-hanging
Air chill
Selection of carcass
Pre-wash
Drip-line
Bagging or
further processing
December 2012 24 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
Figure 9 (porcine) and Figure 10 (ostrich/emu). Figure 11 illustrates sampling from the
opposite sides of the carcass for APC/E. coli and Salmonella samples.
December 2012 25 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
2.8.1 Bovine
Three sites need to be swabbed on bovine. The three sites are as follows:
Rump: (situated on the hindleg, refer Figure 4)1: The 100cm2 site is centred on the fascia
overlying the semitendinosis muscle. The muscle is cut, packed and sold as the ‘eye round’.
The centre of the sampling site is halfway along the muscle on its superficial lateral margin.
Lateral to semimembranosis is the gluteobiceps muscle. This muscle is cut, packed, and
sold as the ‘outside flat’. The 100cm2 template may overlap both muscles.
Flank: The 100cm2 site is centred on the fascia overlying the cutaneous trunci muscle. The
centre of the site is 10cm lateral to the umbilicus on a line drawn along the ninth rib from the
spine and continued on to cut edge of the abdominal wall.
Brisket: The 100cm2 site is centred on the fascia overlying the cranial ventral part of the
cutaneous trunci muscle. The centre of the sampling area is 10cm off the central midline.
The margins of the sampling site may overlap onto the fascia overlying the caudal margin of
the pectoral profundis muscle. The lower edge of the sampling site is an imaginary line
drawn transversely along the thoracic wall at the level of the point of the elbow.
1The naming of the bovine hindleg sample site as rump is required under our equivalence agreement with the US.
December 2012 26 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
Figure 4: Sampling sites for bovine carcass, 100cm2
Rump site situated on the
hindleg
Flank site
Brisket site
Photographs courtesy of David Walkinshaw, Taylor Preston Limited
December 2012 27 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
2.8.2 Ovine and Caprine
2.8.2.1 Ovine: traditional and inverted
A single ovine carcass site needs to be swabbed. The site is as follows:
Forequarter opening Y-cut: The Y-cut site is defined as the anterior aspect of the humero-
radial joint close to the brachial vein, which is clearly visible at the site but a little erratic in its
course.
2.8.2.2 Caprine
Three carcass sites need to be swabbed for caprine. The three sites are as follows:
Outside hindleg: The outside hindleg site is defined as an area one third up on a vertical
line originating at the midpoint of a line between the ischial crest and stifle, and extending to
a line horizontal to the cut end of the hock.
Flap: The flap site is defined as an area ~50mm from the flap edge, midway between the
flap joint and the xiphoid cartilage.
Forequarter opening Y-cut: The Y-site is defined as the anterior aspect of the humero-
radial joint close to the brachial vein, which is clearly visible at the site but a little erratic in its
course.
December 2012 28 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
Figure 5: Ovine sampling site and caprine sampling sites, 5cm2 sampling area.
Ovine carcasses (both traditional and inverted dressing) require sampling of the opening Y
cut site only.
Caprine carcasses require sampling of all three sites shown below.
Photographs courtesy of Sandy Moorhead (AgResearch) and Monique Biss (MAF VA)
Outside leg
Opening Y-cut
Flap
December 2012 29 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
2.8.3 Bobby calf
Three sites need to be swabbed on bobby calves. The three sites are: Fore rump: An area adjacent to the rectal canal, no greater than 50mm horizontally from the
edge of the rectal canal, vertically with midpoint on a horizontal line dissecting the forward
(lower) edge of the rectal canal.
Flank: The site is defined as an area ~50mm from the flank edge, midway between the flank
joint and the xiphoid cartilage.
Foreleg: An area on the outside surface
of the lateral head of the triceps brachii.
The side (left or right of the animal) of the carcass APC/E. coli swabs are collected from
must be recorded for bobby calf samples.
December 2012 30 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
Figure 6: Sampling sites for bobby calf carcasses, 25 cm2 sampling area
December 2012 31 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
2.8.4 Cervine
2.8.4.1 Cervine – traditional
Three sites need to be swabbed on traditional cervine. The three sites are as follows:
Posterior hindleg: The hindleg sample site is centred longitudinally and laterally on an
imaginary line drawn between the posterior aspect of the aitch bone and the archilles
tendon.
Sternum: The sternum site is immediately adjacent to the intersect of the abdominal cavity
opening and brisket, but outside the area of “standard brisket trim” (by <10mm at its closest
edge). Note: Tissue exposed by the standard trim must not be sampled.
Inside foreleg: The inside foreleg site is defined as the anterior aspect of the humero-radial
joint close to the brachial vein, which is clearly visible at the site but a little erratic in its
course.
2.8.4.2 Cervine – inverted
Three sites need to be swabbed on inverted cervine. The three sites are as follows:
Inside hindleg: The sample site is on the medial side and proximal end of the hindleg
immediately adjacent to the pelvic symphysis (midline).
Brisket: The brisket sample site is centred longitudinally on the brisket, but immediately
outside the area of “standard brisket trim” (by <10mm at its closest edge). Note: Tissue
exposed by the standard trim must not be sampled.
Inside foreleg: The inside foreleg site is defined as the anterior aspect of the humero-radial
joint close to the brachial vein, which is clearly visible at the site but a little erratic in its
course.
December 2012 32 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
Figure 7: Sampling sites for cervine carcasses (traditional), 25cm2 sampling area
December 2012 33 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
Figure 8: Sampling sites for cervine carcasses (inverted), 25cm2 sampling area
December 2012 34 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
2.8.5 Porcine
Three sites need to be swabbed on porcine carcasses. The three sites are as follows:
Outside hindleg: Midway between the stifle and hip joint.
Lower flap: 50mm from the abdominal incision midway between the two lower nipples.
Outside shoulder: Above the forward top end of the shoulder blade.
Figure 9: Sampling sites for porcine carcasses, 25cm2 sampling area Photos courtesy Land Meats
Porcine NMD site 1: Outside Hindleg Porcine NMD site 2: lower flap between the
lower two nipples
Porcine NMD site 3: outside shoulder site
Whole carcass view of NMD sites
December 2012 35 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
2.8.6 Ostrich and emu
LEG HUNG
A single ostrich and emu carcass site needs to be swabbed. The site is as follows:
Inside leg: Located longitudinally on the opening cut line and laterally where the edge of the
remaining flap contacts the leg. It is recommended that this site be alternated between left
right sides.
Figure 10: Sampling sites for leg hung ostrich and emu carcasses, 25cm2 sampling area
Photo courtesy of Venison Packers Fielding Limited
WING HUNG
No site identified at present as no NZ premises are using wing hung slaughter and dressing
practice.
Inside hindleg
December 2012 36 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
2.8.7 Salmonella sampling
Where Salmonella sampling is being undertaken the same sites on the opposite side of the
carcass from APC/E. coli samples are to be selected and sampled.
In the case of adult cattle the carcass is physically split. Substitute a side from another
carcass for sampling if the opposite side to that sampled for APC/E. coli is not available due
to condemnation.
Figure 11: Illustrates sampling from opposite sides of the carcass as required for APC/E.
coli and Salmonella samples.
2.8.8 Post chill carcass sampling
• Where post chill sampling is being undertaken, select the same sites on the opposite
side of the carcass from APC/E. coli sampling. For example, the carcasses post
slaughter and dressing can be tagged and re-sampled on the opposite side of the
carcass after chilling.
• Where Salmonella sampling of carcasses post slaughter and dressing coincides with
post chill sampling choose another carcass for post chill sampling that has
December 2012 37 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
undergone the same chilling conditions adjacent to the carcass originally selected
for carcass post slaughter and dressing sampling.
• Where matching is impractical (for example, pre-chill carcasses spread over several
chillers) post-chill carcasses may be selected randomly from a single chiller, rotating
weekly through all available chillers.
• NEVER sample a site that has been previously swabbed because the microbial load
will have been removed/modified during the first swab sampling procedure.
• Note: post-chill carcass sampling can be conducted on the same day as fresh
carcasses are sampled.
2.8.9 Poultry carcass sampling
The whole carcass is sampled for poultry.
2.9 Analysis Required
The following analyses are required:
Table 6: NMD analyses
Product Analyses required
Bovine, bobby calf, caprine, cervine, ostrich and emu, and porcine carcasses post slaughter and dressing
Aerobic plate count E. coli Salmonella
Ovine carcasses post slaughter and dressing
Aerobic plate count
Post chill carcasses Aerobic plate count E. coli
Primal cuts Aerobic plate count E. coli Salmonella
Bulk meat Aerobic plate count E. coli Salmonella
Poultry whole carcass Salmonella Campylobacter
December 2012 38 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
2.10 Summary
Table 7: Summary of NMD sampling requirements
Product to be sampled
Frequency Sites to be tested Analyses
Carcasses Post Slaughter and Dressing Bovine, bobby calf, caprine, cervine and porcine.
Weekly • 3 sites, one side of
carcass, alternating
between the leading
and trailing sides
• 3 sites, other side of
carcass
• APC/E. coli
• Salmonella (each
seasonal sampling
window, except porcine-
refer 2.5.2)
Carcasses post Slaughter and Dressing Ovine
Weekly • 1 site, one side of
carcass, alternating
between the leading
and trailing sides.
• APC only.
• Salmonella is not
required
Carcasses Post Slaughter and Dressing Ostrich and emu
Weekly • 1 site, one side of
carcass, alternating
between the leading
and trailing sides
• 1 site, other side of
carcass
• APC/ E. coli
• Salmonella
Carcasses Post Chill Only required for bovine, bobby calf and caprine species Not required for hot boning premises
Weekly, for a 6 consecutive week annual sampling window, at the start of the season
• 3 sites, one side of
carcass, alternating
between the leading
and trailing sides
• APC/ E. coli
• Salmonella is not
required
December 2012 39 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
Table 7: Summary of NMD sampling requirements (continued)
Product to be sampled
Frequency Sites to be tested Analyses
Primal Cuts
Bovine, bobby calf,
caprine, and cervine
Weekly • 1 site on required
number of separate
cuts (same site as
on carcass)
• APC/ E. coli
• Diluent remaining after
APC/E.coli test is
composited for
Salmonella
• Salmonella (each
seasonal sampling
window)
Bulk Meat
Bovine, bobby calf,
and caprine.
Weekly • 10g from 5 locations
within each carton
composited, from
which a 25g
analysis sample is
taken
• APC/ E. coli
• Diluent remaining after
APC/E. coli tests is
composited for
Salmonella
• Salmonella (each
seasonal sampling
window)
Poultry Whole Carcass Rinse
Every
processing
day
One
processing
day a week for
VLT
• Whole carcass is
rinsed with ssBPW
• Campylobacter for each
carcass.
• Additionally - Salmonella
for one carcass.
December 2012 40 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
2.11 Weekly Sampling Plan for Red Meat – Random Rotational Sampling
To ensure that a complete evaluation of the process is made, samples must be selected
randomly such that every animal has an equal chance of selection.
The sampling plan for red meat must include a randomly selected time each week to sample
all products types (carcasses, cuts and bulk as per premises scope and as required for a
particular species) for each species.
When there are multiple red meat species processed at a premises, a single selected time
period to sample all species can be used (same day, shift and run for all species) if you have
enough samplers and laboratory personnel to process the samples. Alternatively, a different
day of the week or time in the day may be randomly selected for the other species from the
remaining days or part days.
Red meat VLT premises must base their sampling plan on the farmed animal/cervine plan as
above and randomly select a day, shift and run for each week or part week of processing.
2.11.1 Sample selection
First priority: to sample the required carcasses, cuts and bulk for each species each week.
MPI can provide a random sample selection macro available to assist (contact the NMD
Administrator).
The order of selection; day, class, shift, run, time can be varied. The selection can be made
in any order as long as all the parameters required by NMD random rotational sampling
programme are met.
2.11.1.1 Day: random/rotational selection of day of week
Ascertain the days in the week processing for each particular species is taking place.
All processing or part processing days (including statutory holidays and weekends) must be
eligible for selection.
Randomly select an order of days from days available by randomly selecting one and
rotation through the remainder (in any order).
Random sampling only, without rotation through all available days is not permitted. All
available processing days must be sampled from.
For example if there are 5 days in the week available for processing over 5 weeks all days
will be selected for sampling.
December 2012 41 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
Table 8: Random rotational of weekdays
Week number
1 2 3 4 5
Day Wednesday Monday Friday Tuesday Thursday
Ovine species: Random/rotational sampling of sampling days is required for ovine species.
However, where reasonable practical constraints exist, a specified day may be excluded
from sampling without the scientific proof required under section 2.11.3 and on agreement
with MPI VA. Where not all days in a processing week are available for sampling,
random/rotational sampling must occur through the remaining days.
2.11.1.2 Class: random/rotational sampling of class
Where there is more than one class random rotational sampling of classes is required. This
is not dependent on throughput.
The proportion of livestock classes processed at premises is irrelevant under the NMD
programme and must not be used to deliberately bias the selection. Throughput only affects
the number of samples collected if the premises is classified as Very Low Throughput.
The class selected should be used for all product types (carcasses, cut, bulk) of that species
that week.
Ovine – 1 class, lamb, is required to be sampled except on processing weeks where only
sheep is being processed, in which case sheep must be sampled.
Ostrich and emu – 2 classes if both ostrich and emu are being processed.
Cervine – 2 classes; fallow and ‘other’ - wapiti, red, hybrid and sika grouped as one class.
Similar to tossing a coin for heads or tails randomly select the first class of fallow or ‘other’ to
be sampled every 2 weeks.
Bovine – 3 classes; bull, cow, prime. Randomly select one of the 3 classes for week 1, then
randomly selected week 2 from the remaining two classes. The class remaining will be the
one for week 3.
Porcine – 4 classes: suckers, porkers, baconers, choppers. Randomly select one of the 4
classes for week 1, randomly select week 2 from the remaining three classes, and week 3
from the remaining two classes and the class remaining will be the one for week 4. Variation
to this may be required to ensure choppers are selected for one week of each month if
choppers are being processed that month.
December 2012 42 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
Table 9: Random rotation of classes
Week number
1 2 3 4 5 6
Ostrich/Emu Ostrich Emu ostrich Emu Emu ostrich
Cervine Fallow ‘other’ ‘other’ Fallow ‘other’ Fallow
Bovine Cow Prime Bull Bull Cow Prime
Porcine Suckers Porkers Choppers Baconers Choppers Suckers
The italicised class indicates where the rotation starts for each species.
2.11.1.3 Shift: random/rotational sampling of shift
Samples must be collected from all processing shifts. When multiple shifts are running for a
species or a product type of a particular species rotate through all shifts.
Ovine species: Rotational sampling through all processing shifts is required for ovine
species. However, where reasonable practical constraints exist, a specified shift may be
excluded from sampling without the scientific proof required under section 2.11.3 and on
agreement with MPI VA. Sampling must be carried out on the other shift on the selected day
of that week or from the same shift on another randomly selected day of that week.
Bovine, bobby calf, caprine cervine, ostrich, emu and porcine where there are two shifts:
alternate between day and night shift such that over two weeks both shifts are sampled.
Table 10: Alternating shifts
Week number
1 2 3 4 5 6
Shift Day Night Day Night Night Day
2.11.1.4 Random selection of run
It is important that the choice of run from which samples are to be collected is randomly
selected. Every carcass, primal cut or bulk carton has to have an equal chance of being
selected during the chosen run.
2.11.1.5 Random selection of time
• Select the initial item by randomly selecting the time in the run. No element of
routine timetable practises is acceptable.
• Only the initial item needs to be randomly selected.
• Subsequent, but not consecutive, items can be selected in sequence after the
previous item has been sampled and returned to the rail or the conveyor. Selection
of items will be at time intervals equivalent to the time required to sample. Selecting
5 primal cuts at once from the conveyor belt and placing them on a table to swab at
December 2012 43 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
the same time is NOT ACCEPTABLE, except where there is insufficient product type
remaining in the week to make up the samples.
• Another acceptable method is selecting the first carcass randomly from carcass
ticket numbers in that run.
• The time may be chosen by the 24 hour clock system or minutes into the run with a
sampling error of 10 minutes either side. For example, 15:33 ± 10 minutes (the
range is between 15:23 – 15:43).
• If time segments are used the time segments are to be no greater than 20 minutes.
No time either side of the time segments is permitted. It is NOT 20 minutes plus or
minus 10 minutes at each end, allowing 40 minutes altogether.
• If the carcass, cut or bulk sample available at that time is unsuitable (e.g. carcass
goes on to detain rail), then select the next available appropriate carcass, cut or
bulk.
• The time recorded at time of sampling (am/pm, 24 hour clock, carcass ticket number
or minutes into a run) must be in a format that can be interpreted/translated to 24
hour clock units in the final results submitted to NMD.
Table 11: Random/rotational selection of day, random selection of run and time
Week number
1 2 3 4 5 6
Day Wednesday Thursday Friday Monday Tuesday Tuesday
Run 4 3 1 4 2 2
Time (using ticket number)
4045 3125 0215 3701 2245 1523
Time (24 hour clock)
15:33 13:01 08:22 14:45 11:55 10:37
Time (minutes into run)
15 78 61 23 42 36
2.11.2 Departure from the originally selected sampling period
Any changes from the originally selected sampling period must be justified.
If cuts and bulk cannot be sampled in the same run or day selected for carcasses, randomly
reselect for cuts and bulk.
If the production schedule cause days available to sample for a species to alter from what
was expected, randomly reselect from remaining times available for that week.
The most important feature is to complete the required sampling and analyses for each
species each week.
December 2012 44 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
Regarding random run and time selection, it is vital there is adequate communication
between the samplers and the process personnel on the day. The slaughter floor should
notify the sampler if they suspect processing may finish early or that there may be other
interruptions that may have an impact on sampling. The sampler must then randomly
reselect from remaining time available that day or reselect the day and time from remaining
days available that week.
Where the random time selection is near the end of the run sampling may commence 10
minutes prior to the randomly selected time. Any remaining samples must be collected at
the beginning of the next run unless not available (refer below for further options to complete
sampling).
The key task is to collect the carcass, cut and bulk samples required for each species each
week. Where there is insufficient product in the selected sampling period the following
remedial actions can be taken to complete the sampling requirements.
In order of priority, collect samples from:
• incomplete cartons;
• across multiple runs within a shift;
• multiple product types: bulk 95CL, 60CL, 80CL within a class;
• different classes;
• across multiple shifts;
• across multiple days.
Any of the changes described above (for example, alterations to shift, day, class run and or
time) must be documented along with reasons for the departure from the original randomly
selected parameter.
2.11.3 Modifications to the random sampling plan
Modifications to the random sampling plan at individual premises for all species, except
ovine species, may be approved by MPI.
Examples of modifications include:
1. Use of dayshift sampling only instead of day and night shift sampling.
2. Choosing only some particular days of the week for sampling instead of all available
processing days.
Sound statistical analysis will be required to show that microbiological outcomes will not be
compromised by any modifications. It is recommended that where there are shifts that data
is collected for shift comparisons and that verification of no significant differences between
shifts is completed before progressing to statistical comparison between days of the week.
December 2012 45 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
It must also be shown that by electing to sample from only one shift and/or particular day of
the week that this is not bias the coverage of all possible processing scenarios.
The statistical analysis and conclusions must be fully documented by the premises and
approved by MPI VA. MPI VA may choose to confirm the statistical conclusions drawn with
MPI before granting approval. Once approved the premises must notify the NMD
Administrator of the modified sampling plan and provide a copy of the approved justification.
Ovine species: Modification of random sampling plans is prohibited except on occasion
where practical constraints prevent the required sampling. Practical constraints such as
courier schedules must be identified and documented by the premises and agreed with MPI
VA.
Premises are required to document and maintain records of the departure from sampling a
particular shift (day or night shift) and of the particular days of the week nominated for ovine
sampling. These records must be available for MPI VA to view at any time. The NMD
Administrator must be notified of the modified ovine sampling plan.
2.11.4 Practical constraints and technical failures
Due to the premises production schedules, breakdowns, sample transport problems, or
other, meeting the random sampling plan and number of weekly samples required may not
always be possible.
Should a technical problem occur – randomly reselect from the remaining available times
that week (This applies to red meat standard throughput and VLT premises).
If no other times are available in that sampling week, two sets of samples are not required in
the following week.
When expected sample results are non-existent due to technical failure or production
schedule constraint, the factors involved must be recorded by the premises and supplied to
the NMD Administrator promptly. The NMD Administrator will note this in the sample ledger
for future reference.
If the practical constraint is routine, for example no sampling on Friday afternoons because
of courier problems, a detailed justification must be documented. This must show that all
alternatives have been researched and are impossible to implement. This must be approved
by MPI VA who may choose to discuss this with MPI before granting approval. Once
approved the premises must notify the NMD Administrator of the approved derogation and
supply a copy of the supporting documents.
December 2012 46 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
2.12 Poultry Broiler Sampling Requirements
2.12.1 Number of samples
A set number of poultry broiler samples must be taken:
Standard throughput: select 3 carcasses each processing day:
• all 3 carcasses must be analysed for Campylobacter,
• randomly select 1 of the 3 carcasses to be analysed for Salmonella in addition to
Campylobacter,
VLT; 3 carcasses must be selected on one* processing day per week;
• all 3 carcasses must be analysed for Campylobacter,
• randomly select one of the 3 carcasses to be analysed for Salmonella.
The operator must ensure 3 carcasses are collected each processing day for standard
throughput and 3 carcasses are collected on one processing day each processing week for
VLT. The operator must communicate production schedules and any variation to production
schedules to the laboratory at the earliest opportunity.
* Operators of a VLT premises may apply to the NMD Administrator to modify the collection
of 3 carcasses in one week to be conducted over more than one processing day (where
there is more than one processing day available in a particular processing week). The
alternative sample selection programme must be fully documented by the operator and
approved by MPI VA prior to application.
2.12.2 Selection of sampling days
Standard throughput: Sampling must be conducted every processing day.
VLT: 3 samples from one single randomly selected day of the processing days available that
week.
The table below gives two examples of how this requirement can be met.
December 2012 47 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
Table 12: VLT sampling days
Monday Tuesday Wednesday Thursday Friday Saturday Sunday Total Samples
Randomly select 1 sampling day from processing days available
5 processing days, Monday – Friday:
Exclude Exclude 3 Exclude Exclude Np Np 3
1 processing day
3 Np Np Np Np Np Np 3
2.12.3 Shift; random/rotational sampling of shift
If shifts are undertaken then take samples from alternate shifts.
Table 13: Standard throughput shifts
Processing day
1 2 3 4 5 6
Shift day Night day night day Night
Table 14: VLT Shifts
Week number
1 2 3 4 5 6
Shift day Night day night day Night
2.12.4 Random selection of time within a processing day
• All processing times during that processing day must be available for selection.
• You must not alter the randomly selected time to allow for convenient times to
sample or according to flocks, sheds or cuts or any other preference.
Random selection of time
• From unique carcass identification numbers across the entire days processing, or
• From all times processing is underway that day (in minutes)
• The randomly selected time (in minutes) must be recorded prior to sampling.
• If it is not practicable to conduct the test on the specified minute a window of up to
10 minutes either side of the originally selected random time is permitted in which to
conduct the sampling. The reason for departure from the originally selected time
must be recorded by the sampler.
December 2012 48 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
• The actual sample time must be recorded in a format (am/pm, 24 hour clock, unique
carcass number) that can be interpreted/translated to 24 hour clock units in the final
results submitted to NMD.
Standard throughput: Each of the three carcasses needs to be independently randomly
selected from all the times available in each processing day. Where premises are operating
day and night shifts they must collect all three samples from one shift each day as per Table
13 above.
VLT: The initial carcass must be randomly selected. Collect the remaining carcasses at time
intervals equivalent to the time required to bag or rinse each carcass. An alternative is to
independently randomly select all 3 carcasses across the processing day as per standard
throughput. Carcasses for the day must not be collected all at once from the line and then
bagged or rinsed, unless there are no other opportunities to complete collection of the 3
carcasses.
2.12.5 Changes to processing schedules
If processing schedules change in a manner that means that the original random sampling
plan can not be followed any remaining samples that day (standard throughput) or week
(VLT) must be randomly selected from the remaining available processing time.
For VLT premises if there is doubt on the number of days (or which single day that week)
processing is to be undertaken, ensure that sampling is undertaken on the first processing
day. This variation to random selection of sampling day must be recorded.
For standard throughput and VLT; if less than the required samples are taken each missed
sample will be recorded on the database as non-compliant for the poultry Campylobacter
performance target (CPT).
2.12.6 Poultry Campylobacter Performance Target (CPT) programme sampling
requirements
The required number of samples must be taken, as specified in 2.12.1. There are no
practical constraints allowed for within the CPT Programme. If the required numbers of
samples are not taken, the default will be to register the missed sample result/s as a result
greater than the CPT moving window limit.
Where there are technical failures such as samples not delivered to the laboratory within the
correct time, or a laboratory error during analysis, these will be recorded on the database as
technical failures.
Where premises processing schedules change suddenly, there are breakdowns, sample
transport problems or laboratory errors, variations to the above random sample selection
protocols are permitted to allow sampling to be undertaken from the remaining processing
that day or week to make up the required numbers. Such variations must be recorded.
December 2012 49 Schedule 1 National Microbiological Database Programme
NMD Sampling Requirements - Red Meat and Poultry
The operator may wish to undertake extra sampling routinely to allow for practical constraints
and technical failures. Where extra sampling is undertaken, the operator must identify the
original NMD selection and the extra sample/s selected. The Campylobacter enumeration
results entered in the NMD database will commence using the original NMD samples in the
first instance followed with the extra sample/s if necessary, to give a total of 3 results over 1
processing day for standard throughput and 3 results over one processing day per week for
VLT.
December 2012 50 Schedule 1 National Microbiological Database Programme
Sampling
3. Sampling
3.1 Manufacture of Diluents for Sampling and Analysis
A component of the equipment required for sampling will be sterile diluents for moistening
swabs. Diluent aliquots may already be added to vials that swabs will be directly placed into
at time of sampling.
Sterile diluents are used for:
1. Moistening APC/E. coli carcass and primal cut swabs.
2. Moistening APC/E. coli/Salmonella primal cut swabs.
3. Suspension of APC/E. coli bulk meat samples.
4. In dilution series for APC and E. coli analyses.
5. Rinsing whole poultry carcasses.
Whether sterile diluents have been manufactured by the laboratory or an approved supplier
the expiry dates must be recorded and no sterile diluent outside of expiry date used for
sampling.
Peptone diluent
0.1% peptone with 0.85% NaCI.
Note: for bobby calves where the chemical intervention, acidified sodium chlorite (ASC), has
been applied prior to sampling, the addition of Sodium thiosulphate to dechlorinate the
sampled is required.
Table 15: Peptone diluent manufacture
0.1% Peptone Ingredients Gram/litre
Peptone 1.0
Sodium chloride (NaCI) 8.5
Distilled water 1000 ml
Reference: MIMM 2005 or later edition, 5.7.2 (0.1% peptone manufacture) which applies to
all species and 11.1.5 (dechlorination of water sample using sodium thiosulphate) which
applies to bobby calf samples post ASC intervention only.
December 2012 51 Schedule 1 National Microbiological Database Programme
Sampling
Table 16: The volume of peptone diluent required
Species Sterile one diluent volume peptone
Zero (swab, whole tissue immersion) dilution
Ovine, caprine 10ml
Bobby calf, bovine, cervine, ostrich, emu, porcine
15ml
Bulk meat sample suspension 225ml Buffered Peptone Water (BPW)
Single strength buffered peptone water (ssBPW)
Sterile ssBPW is used for
1. Moistening swabs for collection of carcass samples solely for Salmonella analysis.
2. Carcass composite Salmonella analysis making up the volume required for the sample
pre-enrichment broth.
3. Poultry whole carcass rinse diluent for poultry broiler carcasses sampled for
Campylobacter and Salmonella testing. 400ml of ssBPW per carcass is required for all
poultry rinses.
For poultry whole carcass rinse samples and bobby calf Salmonella samples where
chlorinated antibacterial agents are used the addition of sodium thiosulphate is required.
The proportion of sodium thiosulphate to add to ssBPW is listed in Table 17. Where
antibacterial agents other than chlorine based ones are used suitable non-antimicrobial
neutralising additives must be determined.
Table 17: ssBPW manufacture
ssBPW Ingredients gram/litre
Peptone 10.0
Sodium chloride (NaCl) 5.0
Disodium phosphate (Na2HPO4) 3.5
Potassium phosphate (KH2PO4) 1.5
Sodium thiosulphate (Na2S2O3) where chlorinated antibacterial agents are used to decontaminate carcasses (poultry and bobby calves only).
1.0ml of a 3% (Na2S2O3) solution
Distilled water 1000ml
Final pH 7.2+/-0.2 at 25ºC
Reference: MIMM 2005 or later edition, Chapter 7.7.4
December 2012 52 Schedule 1 National Microbiological Database Programme
Sampling
Double strength buffered peptone water (dsBPW).
Sterile dsBPW is used for:
1. For primal cut swab sample composite Salmonella analysis; addition of equal volume of
dsBPW with remaining peptone diluent to constitute as ssBPW pre-enrichment broth.
2. For bulk meat sample composite Salmonella analysis addition of equal volume of
dsBPW with remaining peptone diluent to constitute an ssBPW pre-enrichment broth.
Table 18: dsBPW manufacture
dsBPW Ingredients Gram/litre
Peptone 20.0
Sodium chloride (NaCl) 10.0
Disodium phosphate (Na2HPO4) 7.0
Potassium phosphate (KH2PO4) 3.0
Distilled water 1000ml
Final pH 7.2+/-0.2 at 25ºC
Note: this is a formulation specific to NMD requirements.
3.2 Templates Required for Swab Sampling
Sample collection for carcasses and primal cuts requires the use of templates to delineate
the site to be swabbed.
3.2.1 Template materials
Materials from which templates can be constructed:
1. Hoops (circular or square) made of 3mm stainless steel rod with handle that can be
hooked over a finger.
2. Flexible material (plastic or cardboard).
3. Flat rigid sheet metal. Unsuitable for 100cm2 templates due to the large area and
curved/irregular nature of the surface to be sampled.
The size of all templates used for sampling must be verified in laboratory calibration records.
December 2012 53 Schedule 1 National Microbiological Database Programme
Sampling
Examples of template designs:
Table 19: Suitable template designs
Area to be sampled 5cm2 Ovine, caprine
25cm2 Bobby calf, cervine, ostrich and emu, and
porcine
100cm2 Bovine
Area measurements
Circular – diameter/mm
25.2mm 56.4mm 112.8mm
Square – Side/mm
22.4mm x 22.4mm 50.0mm x 50.0mm 100.0mm x 100.0mm
Hoops (circular or square) made of 3mm stainless steel
rod with handle
Suitable Suitable Suitable
Flexible material – plastic or cardboard
Suitable Suitable Suitable
Flat rigid sheet metal Suitable Suitable not suitable
3.2.2 Sterilisation of templates
It is preferable to use pre-sterilised (autoclaved) multiple templates.
Otherwise for metal hoops and templates after each sample sterilise these for the next
sample by:
• 70% ethanol for flame sterilisation; or
• Ethanol/iso-propanol based disinfectant wipes.
December 2012 54 Schedule 1 National Microbiological Database Programme
Sampling
3.2.3 Sterile cotton tipped swabs
Table 20: Swabs required for sampling
SPECIES Ovine, caprine Bobby calf, cervine,
ostrich/emu, porcine
Bovine Poultry
Number of swabs required per
carcass site or cut site
2 1 wet, 1 dry
4 2 wet, 2 dry
6 3 wet, 3 dry
No swabs Whole carcass rinse method
Swabs must be sterilised before use. A pack of about 30 for use with each sampling batch is
a practical number. Any remaining swabs must be re-sterilised before re-use in another
sampling batch.
Note: Commercial swabs supplied in individual plastic tubes and returned after sampling to
those individual plastic tubes can be used however certain conditions apply. All tubes must
be labelled. The suspension buffer required for each site sampled must be used to rinse out
the inside of all the tubes of swabs associated with that site in order to remove any bacteria
that may have been smeared onto the inner walls by the swabs during sampling and
transport.
3.3 Collection of Samples
Trained sample collectors must be used for sample collection.
Refer to Part 1 clause 4 and Schedule 1 section 1.5 of this Notice.
3.3.1 Equipment required for sampling
For swabbed sites the following requirement is required:
1. Templates – size required for species.
2. Sterile vials containing 4 – 9 plastic or glass beads with or without diluent. If the vials do
have diluent ensure the diluent volume is correct for the species to be sampled.
3. Diluent for swab moistening as required for the type of sampling.
4. Sterile cotton tipped swabs.
5. Flaming alcohol or wipes if required for sterilising templates.
December 2012 55 Schedule 1 National Microbiological Database Programme
Sampling
For bulk meat:
For bulk meat the following equipment is required:
1. Knives (sharpened with appropriate equipment or by experts on site) or scalpels and
blades.
2. Tweezers if required.
3. Plastic sample bags with twist ties or equivalent for example, whirl pac bags.
4. Gloves (vinyl or latex as required) or plastic bags (these must be clean. Sterilisation not
required) to cover hands.
5. Flaming 70% ethanol or ethanol/iso-propanol containing disinfectant wipes for sterilising
the knife, or scalpel blade, and tweezers.
For whole rinse poultry carcasses:
For whole rinse poultry carcasses plastic sample bags with twist ties or equivalent for
example, poultry rinse bags with a tear tie are required.
General:
In general the following equipment is required:
1. Appropriate headwear, overalls/coats and trousers, boots, aprons for entering an edible
area.
2. Pens and paper to record sampling details and indelible pen to label vials as required.
3. Spare sterile templates, vials, swabs and/or gloves/plastic bags.
4. Insulated containers with ice packs (slicker pads or bags of shaved ice).
5. Ladders or stools for access to sampling sites where necessary.
3.4 Sampling Method
3.4.1 Wet/dry swabbing technique
The following is the wet/dry sampling technique:
1. Fill out the laboratory sample log and label all vials (with indelible pen or coded
adhesive labels) to correspond with date, time, sample sites, product type, class and
species.
2. Loosen the caps of vials, but do not open.
3. Document the time that sampling begins.
4. Unwrap a sterile template or alcohol flame/wipe a hoop or metal template. Ensure that
the template does not become contaminated. Hold the template in one hand.
5. Carefully extract the required number of swabs from their sterile wrap.
December 2012 56 Schedule 1 National Microbiological Database Programme
Sampling
6. Hold the shaft/s of half the number of swabs required per site between the fingers and
thumbs of one hand and moisten in the diluent for 5 seconds. Leave the other half of the
sterile swabs dry and hold either separately like chopsticks in the same hand or the hand
in which the template is being gripped.
7. Press the sterile template onto the surface to be sampled. Hold firmly. Care is required
not to smear the template over the sampling area.
8. Take the wet swab/s and rub them over the area defined by the template. Rub the wet
swab/s vertically, then horizontally, then diagonally across the entire surface. The
sampler is required to swab in all three directions to cover the surface area adequately
but not necessarily in the order stated. Rub in all three directions, one way following the
other. Rub for at least the specified times in Table 21.
Table 21: Time required to rub wet swabs
Ovine, caprine 5 cm2
Bobby calf, cervine, ostrich/emu, porcine
25 cm2
Bovine 100 cm2
10 seconds swabbing time 20 seconds swabbing time 20 seconds swabbing time
It is important that the swab/s are rotated slowly and continually, by rolling the shafts
between the fingers and the thumb (take care not to drop or contaminate the dry swab in the
process). Use as much pressure as possible, but avoid breaking the shaft. Do not hold a
swab on such an oblique angle that the shaft contacts the sample site or template. Only the
bud should make contact with the sample, not the shaft.
If a swab becomes contaminated by the contact with foreign non-target surfaces discard the
contaminated swabs and resample another carcass or primal cut.
9. Hold the wet swabs to one side, and repeat swabbing with dry swab/s until the area
being sampled is dry.
10. Insert the wet and dry swabs into a labelled transport vial. The vial may or may not
contain the diluent zero dilution volume required for number of swabs/species. Break
the swabs by pressing the buds against the inside of the vial near the rim and press
down on the lid to aid in snapping the shafts from the buds. Care is required with
aseptic technique and dexterity to prevent fingers contaminating the swabs, inside of lid
or inside of vial. Discard and resample from a new carcass or cut if any contamination
event occurs at this point.
11. Close the vials and place in an insulated container avoiding direct contact with the ice
pack.
12. Disinfect templates between sample sites and carcasses/cuts, or use separate pre-
sterilised templates for each sample.
December 2012 57 Schedule 1 National Microbiological Database Programme
Sampling
3.4.2 Whole tissue composite sampling technique for bulk meat
The following is the whole tissue composite sampling technique for bulk meat:
1. Fill out the laboratory sample log and label all plastic sample bags with twist ties or
equivalent for example, whirl pac bags (with indelible pen or coded adhesive labels) to
correspond with date, time, sample sites, product type class and species.
2. Document the time that sampling begins.
3. Select a carton after packing and before strapping.
4. Open the carton to be tested and carefully peel back the plastic liner.
5. Select 5 whole tissue samples, each of approximately 10g in volume, from the 4
diametrically opposite corners of the full carton and 1 from the centre of the full carton.
No extra whole tissue samples are needed when Salmonella testing is required.
Figure 12: The position of the 5 sites to take whole tissues samples from in a bulk meat
carton
6. Using a glove or a plastic bag inverted over your hand or sterile equipment such as meat
hooks, tweezers or knives, reach into one of the 5 sites in the carton identified in figure
12. Cut out a whole tissue sample by trimming a thin layer from an original external
carcass surface if possible. Each whole tissue sample weighing approximately 10 gram
to result in at least 50 gram collected per carton.
7. Deposit the sample aseptically into a sterile sample bag.
8. Repeat at the 4 remaining sites in the carton depositing samples into the same sample
bag.
9. Seal the sample bag with tape or twist tie.
10. Place the sample bag into an insulated container avoiding direct contact with ice packs.
December 2012 58 Schedule 1 National Microbiological Database Programme
Sampling
11. Re-sterilise knife with alcohol flame/wipes (and tweezers if you are using these) or
change scalpel blade between cartons.
12. Make sure all implements used (knives, tweezers, gloves or plastic bags, ties) are not
left inside the carton after completion of sampling.
3.4.3 Poultry: whole carcass rinse
Each poultry whole carcass rinse sample will be analysed for Campylobacter. In addition one
whole carcass rinse sample of the set taken on the day of sampling will be analysed for
Salmonella as specified in section 2.12.1.
1. Fill out the laboratory sample log and label all plastic sample bags (with indelible pen or
coded adhesive labels) to correspond with date and time of sampling.
2. Sampling periods:
a. Standard throughput; 3 samples per processing day are required. Each of these
samples will be taken at separate randomly selected times. There must be
three discrete sampling times across that days processing. For each of the
three sampling periods the date and time must be recorded.
b. VLT: Select the first carcass of 3 for sampling (or bagging) from the chain.
Record the time of selection of the first carcass. Collect the remaining
carcasses in this single sampling period, ensuring that carcasses are not taken
consecutively from the chain.
3. If the carcass is collected prior to the first drop point suspend the carcass for Tº to drain
excess water from the carcass. This procedure will mimic the usual handling and
draining of carcasses at the premises.
4. Invert the bag over the hand to form a glove. Take care not to contaminate the exposed
internal surface of the bag.
5. Open the sample bag aseptically.
6. Pick up the “drained” bird/carcass by the legs (or air-chilled bird from the chain) using the
“bagged” hand and reverse the bag over the carcass.
7. Bottles (400ml) of sterile ssBPW for rinsing the carcass for Campylobacter, E coli and
Salmonella analyses will have been prepared as per section 3.1 Table 17 and must be
pre-cooled to 4ºC for use at 4ºC at time of sampling.
8. The carcass can be rinsed on selection or transported to the laboratory for rinsing in
which case the carcass must be transported to the laboratory in an insulated container
with ice packs, but not in direct contact with ice packs, and not frozen; arriving at the
laboratory within 15-30 minutes of carcass selection. The temperature of the carcass on
arrival at the laboratory does not need to be measured.
December 2012 59 Schedule 1 National Microbiological Database Programme
Sampling
3.4.3.1 Rinse procedure
1. Rinsing involves pouring 400ml of ssBPW diluent over the carcass in the bag, expelling
most of the air from the bag then securing the bag tightly by hand or with a twist tie.
2. While securely holding the bag, rinse the outside of the carcass, including the wings,
legs, and the inside cavity by gently rocking the carcass in an arching motion,
transferring the weight of the carcass from one hand to the other. The hands can
simultaneously be used to massage the carcass surface, particularly around the wings
and the legs.
3. Time require for the poultry whole carcass rinse procedure is two minutes (120
seconds). Commence by rocking the carcass permitting the rinsate to pass across the
external surfaces. The rinsate will appear yellowy in colour with suspended fats.
Periodically position the bird and clear any fat or skin covering the vent and tilt such that
the rinsate can enter the cavity. Swirl to rinse the entire internal cavity. The rinsate on
exit from the cavity should be a pink to red colour. Continue the rocking motion to pass
the rinsate over external surfaces and complete an internal cavity rinse at least once
more during the two minutes. After the two minutes a rinsate with a reddish tint and
thicker with suspended fats and cells should be visible.
Table 22: Time required
Poultry carcass whole rinse
120 seconds (2 minutes) of rocking for 400ml rinsate
4. To transport the rinse sample to a laboratory place the sample bag/vial into a second
bag, secure the opening and place in an insulated container with ice packs for transport
to the laboratory. Avoid direct contact of the rinse sample with the ice packs.
December 2012 60 Schedule 1 National Microbiological Database Programme
Sampling
Figure 13: Poultry whole carcass rinsing
Arrival of poultry broiler sample;
400ml of ssBPW to be added.
Rocking the bird
Yellowish rinsate after the rocking
procedure, tipped into a corner
Opening the vent entry into the
cavity.
Rinsate after passage through cavity Final rinsate view after 2 minutes.
December 2012 61 Schedule 1 National Microbiological Database Programme
Sampling
5. Isolating the carcass rinse for analysis
• Reset the bag with the carcass on a flat surface. Open the bag and remove the
carcass aseptically using a gloved hand. Expel the air (to ease packing) and secure
the top of the stomacher bag to prevent contamination and/or spillage of the rinse
sample;
OR
• Prior to removal of the carcass aseptically transfer at least 70ml of the rinse sample
to a sterile vial for transportation of the laboratory. Cutting a corner of the bag off is
one practical means to achieve this. 70ml will provide enough rinse sample for
analysis plus back up.
6. Disposition of carcasses
• Carcasses rinsed in the processing room may be returned to the immersion chiller.
• Carcasses subjected to air chilling shall be rinsed with potable water prior to return
to the chain.
• Carcasses rinsed in the laboratory must not be returned to the processing room.
3.5 Transportation of Samples to the Laboratory for All Species
In order to protect samples from extremes of temperature and minimise changes to the
microflora during collection and transport, all samples must be stored and transported in an
insulated container. For NMD purposes extremes of temperature are defined as <0˚C and
>25˚C.
All samples must be subjected to sufficient “frozen coolant” during sample collection and
transportation to keep the samples cold, but not frozen, regardless of whether the sample is
to be immediately analysed, transported off-site or held for a period of time.
December 2012 62 Schedule 1 National Microbiological Database Programme
Sampling
3.5.1 Red meat species samples
Premises may choose to have samples transported to an on-site lab for some analyses and
off-site for others according to schedules, laboratory scope of testing and other factors.
Figure 14: Red meat species sampling timetable
ssss
3.5.2 Transportation temperature and times for red meat samples
• Sample collection temperatures – The temperature within the insulated container
used at the time of sampling should be maintained between 0˚C and 5˚C (not
frozen), and must not exceed 10ºC.2
• Storage temperatures – A refrigerator operating in the 0ºC – 5ºC range must be
used to store samples and diluents.
• Transportation temperatures – The temperature of samples within the insulated
container used for transport should be maintained between 0˚C and 5˚C (not frozen),
and must not exceed 10ºC in transit.
• Controls - Transport sample temperature shall be measured/monitored (using a
control vial/sample to prevent contamination) at a site within the transportation
container that will most likely reflect the temperature of the samples;
2 Four Small Studies for NMD, AgResearch 2001
December 2012 63 Schedule 1 National Microbiological Database Programme
Sampling
o for swab samples stored transported dry, immediately adjacent to the
swabs;
o for swab samples stored/transported in liquid medium, within the medium;
o for whole tissue samples, immediately adjacent to tissue samples.
• Frozen - Samples that are received frozen shall be rejected by the laboratory and
replacement samples collected.
• High Temperature - Samples received that exceed 10ºC must be rejected and
replacement samples sought.
• Sample receipt - The laboratory receiving the samples must:
o record in the sample register the sample temperature on receipt.
o verify that analysis can be initiated within 24h, or 30h under exceptional
circumstances, from time of collection of the first sample. Reference: ISO
17604:2003. Extensions to a maximum of 30 hours are permitted where
practical constraints dictate, but not routinely. Extensions must be justified
with reasons recorded.
o verify that the sampler recorded as collecting the samples was a currently
listed Certified, Associate or restricted sampler.
• Verification of temperatures – the laboratory must use data loggers to verify
temperatures of insulated containers/samples from time of sampling to receipt by
laboratory. Verification of temperatures is required every 6 months.
Premises must implement procedures to ensure that requirements for all analyses of samples,
including Salmonella analysis, are complied with within the time periods specified.
Laboratories, including off-site laboratories, are responsible for training on-plant personnel
seconded to collect samples.
Off-site laboratories are responsible for ensuring that transport companies, for example, on-site
personnel, couriers are aware of the transport and storage temperature and time requirements.
Off-site and on-site laboratories are responsible to ensure night shifts are informed of storage
temperatures, transport to laboratory and time requirements.
3.5.3 Collection and transport of whole tissue samples
All bulk meat whole tissue samples; cold boned, hot or warm boned must be placed in an
insulated container with sufficient frozen coolant at time of sampling to maintain a temperature
between 0˚C and 5˚C (not frozen), and not exceeding 10ºC .
Hot/warm boned whole tissue samples must be rapidly cooled to <5ºC but not frozen. Trials
must be conducted to demonstrate;
December 2012 64 Schedule 1 National Microbiological Database Programme
Sampling
• temperature falls rapidly to <5ºC,
• samples do not freeze,
• that transport arrangements can still be met, and
• that E. coli NZRM 916 when inoculated into the whole tissue samples can be
recovered.
All bulk meat whole tissue samples requiring storage before transport and/or analysis must be
stored in a refrigerator calibrated to 0 - 5ºC.
All bulk meat whole tissue samples must be transported in an insulated container maintaining
between 0˚C and 5˚C (not frozen), and not exceeding 10ºC temperature in transit.
The laboratory must conduct six monthly verification of temperature ranges by datalogging the
temperature of bulk meat samples from time of sampling until commencement of analysis.
3.5.4 Transport of red meat Salmonella samples
Salmonella samples include: carcass Salmonella swabs, APC primal cut swabs, the bulk meat
sample itself, primal cut and bulk original peptone APC/E. coli suspensions, and the final BPW
suspensions.
All Salmonella samples must be in an insulated container maintained between 0˚C and 5˚C (not
frozen), and not exceeding 10ºC in transit, and/or stored in a refrigerator operating between 0˚C
and 5ºC until commencement of analysis.
Following receipt of samples by the laboratory initiation of Salmonella analysis is defined as the
commencement of incubation of the BPW pre-enrichment broth. This may mean cooling of these
original suspensions during APC/E. coli analysis and use of pre-chilled dsBPW to <5ºC to make
up the final Salmonella sample suspension.
December 2012 65 Schedule 1 National Microbiological Database Programme
Sampling
3.5.5 Poultry samples
Figure 15: Poultry sampling timetable
Select whole carcass in process room day shift or
night shift. Record time of collection of
first carcass.*
Initiate analysis within 24 hours after first carcass
selected.
Rinse carcass immediately in process room.
Transport carcass in an insulated container to the laboratory within 15 – 30 minutes of
sampling.
Rinse carcass immediately.
Commence analysis immediately or store at <5ºC.
Transport sample to on-site or off-site laboratory.
Insulated, arriving at or below 10ºC and stored at
<5ºC.
The maximum period may be extended to 30 hours, not routinely, with reasons recorded
*First carcass in each discrete consignment of samples dispatched to the laboratory for that processing day.
December 2012 66 Schedule 1 National Microbiological Database Programme
Sampling
3.5.6 Preparation of poultry samples for transportation
See also 3.4.3
The process for the preparation of poultry samples for transportation is as follows:
1. Tightly seal the sample bag, transportation vial, or bag containing the carcass to be
sampled; and
2. All samples must be immediately placed into an insulated container with frozen coolant
ensuring the sample bags or transport vials are not in direct contact with the frozen
coolant.
3.5.7 Transport and temperature requirements for poultry whole carcass samples
The carcass rinse sample or the carcass itself must be transported to the laboratory in an
insulated container with ice packs, but not in direct contact with ice packs, and not frozen.
1. Whole carcasses not rinsed immediately in the process room, but transported to the
laboratory for rinsing must be transported in insulated containers with sufficient frozen
coolant to cool the sample. The temperature of the carcass on arrival at the laboratory
does not need to be measured.
2. Whole carcass for rinsing in the laboratory must be preferably delivered to the laboratory
within 15 minutes (no later than 30 minutes) of selection of the whole carcass from the
processing chain and immediately rinsed.
3. Rinse samples transported to the laboratory must be transported in insulated containers
with frozen coolant. The temperature of rinse samples within the insulated container
used for transport should be maintained between 0˚C and 5ºC (not frozen), and must not exceed 10ºC. The temperature of the diluent, not just the airspace in the container
must be maintained in this temperature range.
4. All samples are to be delivered to the laboratory as soon as possible after collection.
5. The time of collection of the whole carcass sample must be recorded.
6. The temperature of the rinse sample on arrival at the laboratory must be recorded.
7. Samples that are frozen shall be rejected by the laboratory and replacement samples
collected from the same days processing if possible.
8. Premises must be able to verify that analysis can be initiated within 24h from time of
collection for the first sample. This may be extended to 30h under exceptional
circumstances, not routinely, with reasons recorded.
9. Laboratories, including off-site laboratories, are responsible for training on-plant
personnel seconded to collect samples. Off-site laboratories are responsible for
December 2012 67 Schedule 1 National Microbiological Database Programme
Sampling
ensuring that transport companies, e.g. on-site personnel, couriers are aware of the
transport and storage temperature and time requirements.
10. Off-site and on-site laboratories are responsible to ensure night shifts are informed of
storage temperatures, transport to laboratory and time requirements.
December 2012 68 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
4. Laboratory Analysis
4.1 Dilutions Required
Table 23: Dilutions required
Analyses Red Meat Poultry
APC30 zero to 10-4 (dilution series of 5)
E. coli zero to 10-3 (dilution series of 4) 100 to 10-2 (dilution series of 3)
Campylobacter 100 and 10-1 plus higher dilutions if required.
Note: zero is the undiluted sample.
4.1.1 High end dilutions
All dilutions must be plated in duplicate until the premises data indicates at what dilution a
colony count of greater than the maximum allowable is never, or rarely exceeded.
The maximum allowable counts are:
300 CFU for spread plates;
150 CFU for spread plate half plates;
250 CFU for PetrifilmTM APC;
150 CFU for PetrifilmTM E. coli.;
150 CFU for mCCDA direct plate Campylobacter
When a valid count exceeds (>300, >250 or >150 on the highest dilution) the dilution series
shall be immediately extended until such time as the premises demonstrates that the higher
counts are not a consistent trend.
It is very important to have a valid actual count of higher results for statistical purposes. A
TNTC count can be any value greater than the valid count value of 300, 250 or 150 on the
highest dilution tested and is thus more variable and unknown than a not detected count. A
TNTC result can range from as low as a 2 log10 value up to any higher value (infinite). It
could be 5 log10 or 10 log10. If a dilution series is not great enough this will lead to TNTC
results and such high counts cannot be included in the database, which, in turn, leads to a
poor representation of the true range of results.
When insufficient dilutions are prepared and counts are above the maximum allowable count
on the lowest dilution the laboratory must report to NMD a too numerous to count result
which will be classed as a technical failure.
A TNTC must be regarded as “detection” and/or “higher than expected count” when
assessing compliance with premises performance criteria under HACCP and RMPs.
December 2012 69 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
Note that the area sampled will have an effect on the number of dilutions required. More
bacteria are expected to be recovered from a larger sample area therefore more dilutions will
be required.
As regulatory limits will be applied to poultry broiler carcass Campylobacter enumeration
results laboratories need to ensure that a suitable series of dilutions is plated to minimise the
chance of TNTC results. If a TNTC result occurs it will be recorded as exceeding the CPT
limit. Refer sections 4.10 and 6.9.
When a TNTC count occurs the test does not need to be repeated.
Upon receipt of a TNTC result the laboratory must extend the dilution series, in anticipation
of higher counts, for at least 3 subsequent poultry processing days (standard throughput) or
3 subsequent processing weeks (VLT) following the TNTC result notification.
4.1.2 Low end dilutions
All cases – Undiluted (zero dilution) plates or PetrifilmTM plates that contain less than the
lowest counting range of 30, 25, or 15 are to be counted and reported.
Table 24: Summary of acceptable counting ranges
Dilutions Spreadplate APC
Spreadplate APC ½ plate
mCCDA direct plate
PetrifilmTM APC PetrifilmTM
E. coli
100 0-300 0-150 0-250 0-150
10-1, 10-2,…..10-n 30-300 15-150 25-250 15-150
4.2 Duplicate Plating/Analytical Precision
Plating must be performed in duplicate, i.e. two agar plate, both sides of a ½ plate or two
PetrifilmTM inoculated from each dilution until laboratory precision data (for all analysts
performing testing) indicates otherwise. Duplicate plating (APC30 and E. coli) must be
undertaken to give statistical confidence to the results obtained. Use the Analytical Precision
calculation (for a single operator) in chapter 5 Appendix 1.7 of MIMM to determine a Z score
which is then compared to a limit of 1.96.
Record all duplicate plate counts that fall within the acceptable counting ranges as specified
in section 4.1.
If a laboratory demonstrates that it meets the Analytical Precision criteria outlined in MIMM
2005 or later edition, it may use singlet plating for all dilutions other than the undiluted
(zero) dilution sample.
For ILCP analyses related to NMD APC and E. coli tests use the NMD procedures described
in this publication. Although successful precision analysis may have eliminated the need for
duplicates on all dilutions for routine NMD analyses, duplicates are required for all dilutions
for the corresponding ILCP tests.
December 2012 70 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
4.3 Preparation of Dilutions
4.3.1 Introduction
When conducting a quantative bacterial analysis, sample suspensions must be diluted to an
appropriate level that will result in 30 – 300 colony forming units (CFU) on the plate, 25 – 250
CFU if using APC PetrifilmTM or 15 – 150 CFU if using half plates, E. coli PetrifilmTM or
mCCDA direct plate.
Dilutions for viable bacterial counts are aseptically prepared in ten fold steps.
All dilutions are performed using 0.1% peptone + 0.85% NaCI diluent. Reference: ISO
17604:2003.
The dilutions volume used must be sufficient to inoculate duplicate plate count agar plates,
duplicate PetrifilmTM, enough volume for the composite Salmonella pre-enrichment if
required and leaving enough volume in case of error.
Two dilution volumes are recommended:
a. 9ml in 25ml universal bottles or vials, with 1ml transfer volume.
b. 4.5ml in microcentrifuge or microdilution tubes, with 0.5ml transfer volume.
The use of pre-poured dilution volume is allowed only if a laboratory can provide evidence
that they do not lose volume during autoclaving (as defined in MIRINZ Bulletin 35 or MIMM
2005 or later edition, Section 2.5.6), and that they have an appropriate QA programme in
place for ongoing verification.
Always use a fresh pipette or pipette tip for each transfer of diluted sample.
Ensure that dilutions are as homogenous as possible at all stages by:
• Carefully following the instructions for the use of micropipettors;
• Mixing each dilution thoroughly prior to the next dilution step to ensure that the
bacteria are randomly distributed;
4.3.2 Definition of zero dilutions for calculation purposes
The swab suspension (swabs immersed in the initial volume of either 10ml or 15ml) is an
undiluted sample referred to as the “zero dilution”. The swab suspension is entered into the
calculations as the 100 dilution.
The whole tissue suspension is dilution but in order to maintain consistency with plate
labelling, it is entered into the calculation as the 100 dilution (undiluted) and accounted for in
the final numeric multiplier.
4.4 Preparation of Swab Samples for APC and E. coli Analysis
Add to each vial with swabs.
December 2012 71 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
Table 25: Swab suspension volumes required
Bovine, bobby calf, cervine, ostrich/emu, porcine
Ovine and caprine
15ml sterile 0.1% peptone diluent to each vial
10ml sterile 0.1% peptone diluent to each vial
Make certain there are 4 – 9 sterile glass or plastic beads in each vial.
Close the vial and shake vigorously to loosen the cotton bud of the swab for 2 minutes
(ensure consistency). Shaking can be performed by hand or by using a combination of initial
shaking by hand and a vortex mixer in 3 x 10 second bursts. Note that shaking by hand is
usually sufficient and enables several vials to be processed at once.
The cotton buds should be well broken up by this treatment. The cotton swabs must be left
in the diluent until all the dilution and plate inoculation procedures are completed. Do not
remove the swabs from the vials at any stage.
4.5 Preparation of Red Meat Separate Carcass Site Samples Swabbed for Salmonella
Analysis
Note: Salmonella testing to support official assurances for beef exported to Sweden and
Finland or to any other country with the same requirements, eg Iceland, must use the
required sampling and method specified for routine official test 2.4.2.
Table 26: Preparing Salmonella sample suspensions
Species Bovine 5 carcasses
Bobby calf, Porcine 5 carcasses
Cervine 3 carcasses
Ostrich/Emu 2 carcasses
Caprine 5 carcasses
Total number of swabs
6 swabs x 3 sites x 5 carcasses =
90 swabs
4 swabs x 3 sites x 5 carcasses =
60 swabs
4 swabs x 3 sites x 3 carcasses =
36 swabs
4 swabs x 1 site x 2 carcasses = 8
swabs
2 swabs x 3 sites x 5 carcasses =
30 swabs
Volume of ssBPW
250 ml 150 ml 150 ml 30 ml 75 ml
VLT (Very low throughput) premises with only one carcass sample (no composite)
Species Bovine VLT Bobby calf, Porcine VLT
Cervine VLT Ostrich/Emu VLT
Caprine VLT
Total number of swabs
6 swabs x 3 sites x 1 carcass =
18 swabs
4 swabs x 3 sites x 1 carcass =
12 swabs
4 swabs x 3 sites x 1 carcass =
12 swabs
4 swabs x 1 site x 1 carcass =
4 swabs
2 swabs x 3 sites x 1 carcass =
6 swabs
Volume of ssBPW
50 ml 30 ml 30 ml 15 ml 15 ml
Add an appropriate number of glass beads to the suspension, close the bottle and shake
vigorously for 2 minutes to remove the bacteria from the swabs into the diluent.
December 2012 72 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
4.6 Preparation of Bulk Meat (Whole Tissue) Samples for APC, E. coli
Note: Salmonella testing to support official assurances for beef exported to Sweden and
Finland or to any other country with the same requirements, for example, Iceland, must use
the required sampling and method specified for routine official test 2.4.2
• Place the whole tissue samples (5 X ~10g) onto a sterile chopping board and finely
dice (size reduce) with a sterile knife or other suitable aseptic means.
• Re-sterilise or use separate chopping boards and knives etc for each sample.
• Aseptically weigh 25g of diced tissue directly into a stomacher bag.
• To each bag add 225ml of sterile diluent (0.1% peptone + 0.85% NaCl).
• Stomach for 2 minutes.
4.7 Aerobic Plate Count, APC30
Applicable to red meat NMD programmes.
Not applicable to poultry NMD programmes.
The following APC methods are approved for the red meat NMD programmes:
1. Spread Plate method (Routine Official test 2.1.2)
2. PetrifilmTM Aerobic Plate Count method (Routine official test 2.1.3)
3. Spiral Plater method (Routine official test 2.1.4)
4.7.1 General considerations for plating
The following are general considerations for plating:
1. Pre-poured plate count agar plates must be dried before use. Plates may be dried
using one of the following methods:
i. incubation for 24h at 30-37ºC inverted with lids in place;
ii. inverting with lids ajar in a laminar flow cabinet for 20-30 minutes;
iii. inverting with lids ajar in a still air incubator at 30-37ºC for 1 ½ to 2h;
iv. inverting with lids ajar in a forced air incubator at 30-37ºC for 30 minutes.
2. The swab samples in diluent with beads must be shaken for 2 minutes, bulk meat
samples 25g/225ml peptone diluent must be stomached for 2 minutes before
commencing analysis.
3. The same pipette/tip may be used when working up a dilution series from the most dilute
level to the most concentrated level.
4. The required incubation temperature for the APC is 30ºC +/- 1ºC (ISO 17604:2003).
December 2012 73 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
5. Initiation of analysis for APC is defined as the time when the sample is suspended and
ready for serial dilution.
6. The incubation time is 48 hours. Where plates cannot be counted at 48h plates may be:
I. incubated for up to but not longer than 72h
II. removed from the incubator and stored for no longer than 48h in a laboratory
refrigerator set at not greater than 5ºC.
The extra storage time of the plates must be recorded on the result sheet.
7. Count only plates with between 30 to 300 colonies, 25 to 250 colonies for PetrifilmTM
APC, 15 to 150 colonies for ½ plates and PetrifilmTM E. coli plates (ISO 17604:2003).
See table 22: Acceptable counting ranges.
8. If colonies are indeterminate at 48h estimate a count, re-incubate for a further 18-24h
and recount. The total incubation time must be recorded on the result sheet.
9. Express the result as the number of colony forming units (CFU)/cm2 or /g of sample.
When there are nil counts on both of the duplicate zero dilution plates, express the result
as “not detected”.
4.7.2 APC30 by spread plate method
(Reference MIMM 2005, Chapter 6 or later edition). Carry out all quality control procedures
for the media and methods using Pseudomonas aeruginosa NZRM 981 or Lactobacillus
viridescens NZRM 3313 as the positive control.
4.7.2.1 Method
The following is the APC30 by spread plate method:
1. Dispense 0.1ml (100µl) volumes of the appropriate dilutions (100 non-diluted, 10-1, 10-2,
10-3, 10-4) onto duplicate, dried plate count agar plates, or a single ½ plate.
2. Start with the highest (most dilute) level of dilution. Mix the dilutions thoroughly before
dispensing. The same pipette/tip may be used for all inoculations.
3. Spread the inoculum over the surface of the agar as evenly and as quickly as possible
using a sterile spreader (bent glass rods or disposable plastic spreaders). In order to
prevent cross-contamination, sterilise the spreader between plates both within and
between dilutions.
4. Allow the inoculum to soak into the agar surface. This should occur within 15 minutes. If
liquid does not soak in (i.e. the plates were not dried sufficiently), the viable bacteria
present in the inoculum may start to replicate and spread, possibly resulting in an
inaccurate count.
December 2012 74 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
5. Invert the plates before incubation so that the agar is in the upper half of the petri dish.
Inversion prevents condensation dropping onto the surface of the agar reducing
contamination and preventing the spread of motile micro-organisms. Stack if necessary,
and incubate at 30±1ºC for not less than 48h.
6. Count all colonies. Record all counts on the undiluted plates and only those between
30-300 on full plates or 15-150 on half plates.
7. Express the results as the number of colony forming units CFU/cm2 or /g of sample.
8. If colonies are not detected on both of the zero dilution plates express the results as “not
detected”.
9. Where counts are greater than 300 on full plates or 150 on half plates on the highest
dilution plate or half plate record the result as to numerous to count (TNTC). The TNTC
must be regarded as a “detection” and /or “higher than expected count” when assessing
compliance with premises performance criteria under HACCP and RMPs.
4.7.3 APC30: PetrifilmTM Aerobic Count Plate Method
(Reference MIMM 2005, Chapter 6 or later edition).
4.7.3.1 Method
The following is the APC30 PetrifilmTM Aerobic Count Plate Method:
1. Carry out all quality control procedures for the media and methods using Pseudomonas
aeruginosa NZRM 981 or Lactobacillus viridescens NZRM 3313 as the positive control.
2. Place the PetrifilmTM Aerobic Count plate onto a flat surface, label and lift the top film.
Do not allow the plate to curl.
3. Inoculate and process each PetrifilmTM plate individually. Under no circumstances
inoculate several at the same time.
4. Lift the top film, and carefully dispense 1ml of the appropriate dilution onto the agar.
5. Slowly roll the top clear plastic film down onto the inoculum to prevent entrapment of air
bubbles.
6. Distribute the sample evenly using the spreader provided (ridge side down). PetrifilmTM
Aerobic Count plates do not have a foam dam that’s why the spreader is used ridge side
down. Apply a gentle even pressure, but do not twist or slide the spreader. Carefully lift
the spreader clear or the PetrifilmTM plate.
7. Move the completed PetrifilmTM plate to one side and allow one (1) minute for the agar to
set.
December 2012 75 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
8. In the meantime inoculate and process the next PetrifilmTM plate.
9. Incubate all PetrifilmTM plates for not less than 48h at 30ºC +/- 1ºC clear side up and in
stacks of no more than 20.
10. Count only plates with 25-250 colonies, the exception being the undiluted (zero dilution)
plate if counts are less than 25.
11. Express the results as the number of colony forming units CFU/cm2 or /g of sample.
12. If colonies are not detected on both of the zero dilution plates express the result as “not
detected”.
13. Where counts are greater than 250 on the highest dilution plate record the result as too
numerous to count (TNTC). A TNTC must be regarded as a detection “and/or “higher
than expected count” when assessing compliance with premises performance criteria
under HACCP and RMPs.
4.7.4 APC30: Sprial Plater Method
(Reference MIMM 2005, Chapter 6 or later edition).
4.7.4.1 Considerations
The quality of pre-poured agar is paramount to the successful use of the Spiral Plater.
Plates must be prepared according to the manufacturer’s guidelines supplied with the Spiral
Plater.
The plate surface must be smooth, the depth uniform and the surface uniformly dry but not
dehydrated.
Pre-poured agar plates must be dried before use.
4.7.4.2 Method
The following is the Spiral Plater Method:
1. Carry out all quality control procedures for the media and methods using Pseudomonas
aeruginosa NZRM 981 or Lactobacillus viridescens NZRM 3313 as a positive control.
2. Follow all instructions for use in the manual supplies with the spiral plater.
3. After inoculation, leave the plates on the bench right-way-up for 10 minutes to allow the
inoculum to soak into the agar.
4. Invert the plates, stack if necessary, and incubate at 30ºC +/- 1ºC for no less than 48h.
5. Obtain a count either manually according to the manual supplied with the spiral plater or
automatically using a computerised plate scanner.
December 2012 76 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
6. Do not count spiral plates with an irregular distribution of colonies caused by dispensing
errors.
7. Express the result as the number of colony forming units; CFU/cm2 or /g of sample.
8. If colonies are not detected on the plate express the result as “not detected”.
9. Where counts out of range on the highest dilution plate record the result as too
numerous to count (TNTC). A TNTC must be regarded as a “detection” and/or “higher
than expected count” when assessing compliance with premises performance criteria
under HACCP and RMPs.
4.8 Escherichia coli PetrifilmTM
Note that red meat samples will be in a peptone diluent suspension.
The PetrifilmTM E. coli method is the only method of E. coli analysis approved for the red
meat NMD Programme.
Reference MIMM 2005, chapter 8.4 or later edition.
4.8.1 Method
1. Carry out all quality control procedures for the media and methods using Escherichia coli
NZRM 916 as the positive control and Klebsiella pneumoniae NZRM 482 or Enterobacter
aerogenes NZRM 798, as a negative control.
2. Initiation of analysis is defined as when the sample has been suspended as is ready for
serial dilution.
3. Place a PetrifilmTM E. coli plate on a flat surface and hold the plate flat. Do not allow the
plate to curl.
4. Mix the dilutions thoroughly before dispensing. The same pipette tip may be used for all
inoculations if you commence with the highest (most dilute) dilution.
5. Lift the top film and carefully dispense 1ml of the appropriate dilution into the circular well
containing the agar. Note: Do not inoculate several at the same time. It is imperative to
inoculate and lower the top film before proceeding to the next.
6. Slowly roll the top clear plastic film down on to the inoculum to prevent entrapment of air
bubbles.
7. If necessary use the spreader provided flat side down, as PetrifilmTM E. coli plates have
a rim around the well, to distribute the sample evenly over the well. Apply a gentle even
pressure to the spreader, but do not twist or slide the spreader. Carefully lift the
spreader clear of the plate.
8. Move the completed plate to one side and allow one (1) minute for the agar to set.
9. In the meantime inoculate and process the next plate.
December 2012 77 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
10. Incubate all plates for 18-24h at 35 +/- 1ºC or 37 +/- 1ºC (36 +/- 2ºC is not acceptable)
clear side up and in stacks of no more than 20.
11. Where plates cannot be counted at 24h the plates may be removed from the incubator
and stored for no longer the 72h in a laboratory refrigerator set at not greater than 5ºC,
or freezer. Storage time/temperature must be recorded on the result sheet.
12. If colonies are indeterminate at 24h, count as best as possible, re-incubate for a further
18-24h and recount. Record the incubation time on the result sheet.
13. Count as E. coli all blue colonies with or without gas bubbles (3M approved).
i. Do not count colonies that have grown on the foam dam as the may not have been
subjected to the selective influence of the medium thus might not be E. coli.
ii. Count only plates with between 15 and 150 counts, the exception being if the plate
from the non-diluted (zero) dilution sample has less than 15 colonies.
iii. High numbers of E. coli will turn the medium blue and high numbers of
Enterobacteriaceae will turn the medium red. Both situations make accurate
enumeration improbable. Should this occur the highest dilution plated the samples
must be recorded as (TNTC) and the operator immediately notified.
14. Express the results as the number of E. coli CFU/cm2 or /g or /ml of sample. If blue
colonies with or without gas are NOT detected express the results as “not detected”.
15. Where counts are greater than 150 on the higher dilution plate record the result as too
numerous to count (TNTC). A TNTC must be regarded as a “detection” and/or “higher
than expected count” when assessing compliance with premises performance criteria
under HACCP and RMPs.
4.9 Salmonella
This method is applicable to all NMD Programmes; red meat and poultry.
Note: Salmonella testing to support official assurances for beef exported to Sweden and
Finland or to any other country with the same requirements, for example, Iceland, must use
the required sampling and method specified for routine official test 2.4.2
4.9.1 Sample preparation
Reference MIMM 2005, Chapter 7.7.
1. Carry out all quality control procedures for the media and methods using Salmonella
menston NZRM 383 as the positive control and E. coli NZRM 916 as the negative
control.
2. Sample preparation. Samples are derived either from separate carcass swabs taken
from a specific site sampled for Salmonella analysis only or from the primal cut swab,
bulk meat or whole carcass (poultry) suspension.
December 2012 78 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
4.9.1.1 Red meat carcasses with a separate site swabbed for Salmonella analysis
See section 4.5 Table 26.
4.9.1.2 Poultry carcass rinse samples and red meat primal cut and bulk meat swab suspensions for Salmonella analysis
Poultry carcass rinse samples.
On receipt of the poultry carcass rinse sample transfer 30ml to a separate sterile vial for use
as the BPW suspension described in section 4.9.2.
Red meat.
See also Section 2.10 Table 7 for red meat species requiring Salmonella sampling/analysis
for cuts and or bulk.
For each of the primal cut initial swab suspensions take a specified volume of the diluent and
composite into one vial then add an equal volume of dsBPW to the composite sample.
Note: For VLT premises there will be only one cut and bulk sample each week. Thus there
will be no composite sample.
Table 27: Primal cut Salmonella pre-enrichment composite sample from swab suspensions
Bovine 100cm2 Bobby calf 25cm2 Cervine 25cm2 Caprine 5cm2
5 samples of 8ml = 40ml + 40ml dsBPW
= 80ml in total
5 samples of 8ml = 40ml + 40ml dsBPW
= 80ml in total
2 samples of 8ml = 16ml + 16ml dsBPW
= 32ml in total
5 samples of 1ml = 5ml + 5ml dsBPW
= 10ml in total
VLT (very low throughput) premises with only one sample (no composite)
1 sample of 8ml = 8ml + 8ml dsBPW
= 16ml in total
1 sample of 8ml = 8ml + 8ml dsBPW
= 16ml in total
1 sample of 8ml = 8ml + 8ml dsBPW
= 16ml in total
1 sample of 1ml = 1ml + 1ml dsBPW
= 2ml in total
Bulk meat – bovine, bobby calf, caprine species Salmonella enrichment composite
sample from five 25g bulk meat stomached suspensions:
• 5 x 1ml suspension diluent = 5ml + 5ml dsBPW = 10ml in total.
• For samples of 60-80VL trim add 0.05ml (50µl) of Tween 80 or 0.03ml (30µl) of
Terigol 7 to the enrichment volume.
For VLT premises where there is only one bulk meat sample:
• To 1ml of suspension dilution add 1ml dsBPW = 2ml in total.
• For samples of 60-80VL trim add 0.01ml (10µl) of Tween 80 or 0.006ml (6µl) of
Terigol 7 to the enrichment volume.
Bulk meat samples are not required for cervine, ostrich and emu, ovine or poultry.
December 2012 79 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
4.9.1.3 Transport or retention of Salmonella samples for later analysis
For red meat carcass sample where the Salmonella sample sites/swabs are separate:
• Whether or not the swabs are suspended in ssBPW they must be transported to the
laboratory under normal transport requirements; maintaining temperatures between
0 ºC and 5ºC (not frozen), and not exceeding 10ºC.
For primal cut swabs and bulk meat ex APC and E. coli testing:
• These samples suspensions are then composited and mixed with dsBPW to form
the composite BPW suspension for Salmonella analysis. These BPW suspensions
must be transported or stored maintaining temperatures between 0 ºC and 5ºC (not
frozen), and not exceeding 10ºC. The original suspensions also need to be kept
below 10ºC during APC/E. coli analysis.
All Salmonella analysis must commence within 24 hours of the original sample collection.
Under special circumstances this may be extended to 30 hours, with reasons recorded.
4.9.2 Method
1. BPW suspensions must not be stored or left on the bench for long periods (such as over
the weekend) before incubation commences. Incubation must commence as soon as
possible after the BPW suspension is prepared.
Initiation of Salmonella analysis is defined as from the time the BPW suspension is
placed in the incubator, the start of the BPW pre-enrichment step.
2. Incubate the pre-enrichment samples at 35+/-1ºC or 37+/-1ºC (36+/-2ºC is not
acceptable) for 18-24 hours. Reference: Mills and Barea, (2003) AgResearch Client
Report (CR) 907.
After initiation of analysis, refrigeration of this pre-enrichment broth and/or the RVS
selective enrichment broth is not permitted at any time. All steps in the analysis must
be completed within the time temperature bounds described in this method.
3. Transfer 0.1ml of the BPW enrichment culture to 10ml of RVS selective enrichment broth
pre-warmed to 42ºC.
4. Incubate the RVS selective enrichment broth for 24 hours +/- 2 hours at 42+/-0.2ºC in a
water bath (preferable) or incubator certified as capable of control to this specific
temperature range. The temperature is critical for maximum recovery of Salmonella.
5. Transfer a loop-full (10µl) of the RVS culture to one plate of BGM agar and one plate of
XLD agar selective plating media. Plates must be labelled with agar type (BGM or XLD)
as the agar colour can change during incubation making the two types of media
indistinguishable. Streak to obtain single, well isolated colonies.
December 2012 80 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
6. Incubate both plates for 18-24 hours at 35+/-1ºC or 37+/-1ºC (36+/-2ºC is not
acceptable).
7. Examine the plates for typical Salmonella colonies (refer to MIMM 2005 or later edition,
chapter 7.7, Table 1).
BGM agar: Pink surrounded by bright red medium.
XLD agar: Red with a black centre. H2S negative serotypes have red colonies without a black
centre.
If swarming bacterial growth covers the plates refer to MIMM 2005 or later edition, Chapter 7.7.5
for further instruction.
4.9.3 Confirmation of presumptive positive Salmonella
Select five or more single, well isolated, typical colonies from the selective plating media.
Use biochemical tests and/or commercial kits as listed in MIMM 2005 or later edition,
Chapter 7. Perform the agglutination reaction as per manufacture’s instructions. The five
colonies may be tested sequentially and if any one of these colonies is positive the sample is
deemed positive. The remaining colonies need not be tested.
4.9.3.1 Obtaining pure cultures of Salmonella for serotypical analysis
Streak colony from either selective media onto MacConkey agar. Incubate for 24h at 35+/-
1ºC or 37+/-1ºC (36+/-2ºC is not acceptable). Subculture typical yellow colonies to plate
count agar and incubate overnight at 35+/-1ºC or 37+/-1ºC (36+/-2ºC is not acceptable).
Refer to MIMM 2005 or later edition, Chapter 7.7.7 and Table 4 or 7.7.7.
4.9.3.2 Final confirmation and serotyping
Colonies may be confirmed in-house using Poly O and Poly H anti-sera. If either is positive,
submit purified colonies to ESR.
Where presumptive Salmonella has been confirmed as in 4.9.3 by latex agglutination purified
colonies must be submitted directly to ESR Kenepuru Science Centre, Porirua for final
confirmation and serotyping.
4.9.3.3 Reporting results
Where samples are composited for Salmonella testing express the result as Salmonella
“detected in a composite sample” or “not detected in a composite sample”. For poultry whole
carcass rinse samples report the results as “not detected/carcass”.
December 2012 81 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
4.10 Poultry Carcass Campylobacter Direct Plate Enumeration Method
This method is applicable to the NMD poultry broiler programme for carcasses selected for
Campylobacter testing rinsed with 400ml of ssBPW.
If chemical decontamination washes were used during processing, ensure that non-
antimicrobial neutralising additives tailored to the decontamination concerned were added to
the ssBPW used for rinsing. Refer section 3.1.
4.10.1 Plating Media
Selective enrichment medium:
Modified charcoal cefoperazone desoxycholate agar (mCCDA).
Basal medium: (commercially available)
Lab-lemco powder 10.0g/l
Peptone 10.0g/l
Sodium chloride 5.0g/l
Bacteriological charcoal 4.0g/l
Casien hydrolysate 3.0g/l
Sodium desoxycholate 1.0g/l
Ferrous sulphate 0.25g/l
Sodium pyruvate 0.25g/l
Agar 12.0g/l
Distilled water 1000ml
pH 7.4+/-0.2
Suspend 22.75g of dehydrated mCCDA base in 500ml or distilled water, mix well and boil to
dissolve the agar. Sterilise by autoclaving at 121ºC for 15 minutes.
mCCDA Selective Supplement (commercially available)
Vial quantities suitable for 500ml basal medium are:
Cefoperazone 16mg
Amphotericin B 5mg
Complete mCCDA medium
Cool autoclaved basal medium to about 50ºC. Aseptically add 1 vial of each selective
supplement to 500ml of mCCDA base, mix thoroughly and pour into Petri plates.
Plates can be stored for up to two weeks in sealed containers at 4ºC.
Prior to use, air dry plates (do NOT use an laminar flow cabinet), either by leaving unopened
on the bench overnight, or when plates are used on the day of preparation, in an incubator at
42ºC.
December 2012 82 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
4.10.2 Direct Plating
Taking 2ml of rinsate from the rinse bag or sample container apply over six labelled,
appropriately dried, mCCDA plates. All of the 2ml must be dispensed onto the six plates.
The exact amount per plate of the 2ml does not need to be measured as all six plates will be
counted. Spread each aliquot on the agar surface with a sterile spreader. Allow the 6 plates
to remain upright at room temperature to permit the sample to soak in before inverting.
Plate out an additional 0.1ml of the rinsate onto each of an additional two mCCDA plates.
If higher numbers are expected set up a further 10 fold dilution series in ssBPW and plate
0.1ml of each dilution (in duplicate) onto mCCDA plates as described above. Note that a
suitable dilution series must be set up to minimise the occurrence of TNTC results.
Incubate in a microaerobic atmosphere (5% O2, 10% CO2, 85% N2). Ensure an appropriate
number of sachets for the jar/container are used. If too many sachets are used a moist
environment and condensate on plates will occur, which could influence colony growth and
cause colony spreading. Too many, or too few sachets, will not create the correct gaseous
mixture in the container.
Incubate for 48 hours +/- 2 hours at a single temperature of 42+/- 0.5ºC. The microaerobic
atmosphere must be maintained at all stages of incubation.
4.10.3 Presumptive Count
Select plates from dilutions of the 2ml set of 6 plates, or 0.1ml duplicate plates with not more
than 150 colonies on any plate. Counts of over 150 on any plate are considered TNTC as
Campylobacter colonies are so variable in size.
Examine these plates for characteristic thermotolerant Campylobacter spp colonies: flat grey
and moistened, variable size for 1mm – 5mm in diameter, from pinpoint colonies to roundish
2ml rinsate over 6 plates
0.1ml
0.1ml
0.1ml
0.1ml
0.1ml 0.1ml
Zero dilution 2ml rinsate plated over all 6 plates
0.1ml rinsate plated onto each plate
- 1 dilution 1:10 ssBPW dilution of rinsate, 0.1 plated onto each plate
- 2 dilution 1:10 ssBPW dilution of above, 0.1 plated onto each plate
DILUTION SERIES
December 2012 83 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
or flattened out colonies with irregular spreading margins. Count and record the numbers of
characteristic thermotolerant Campylobacter spp. colonies on this set of plates.
Other organisms that may be present on mCCDA plates include creamy coloured yeast
colonies, which can easily be distinguished by 10x magnification, Arcobacter and
Pseudomonads.
Photograph of Campylobacter jejuni colonies and some creamy white yeast colonies on a
mCCDA plate, courtesy of Tegel Foods Limited, Christchurch.
4.10.4 Confirmation
Two methods of confirmation are permitted. Laboratories may elect which they will use
routinely, but must use their elected method on a regular basis to comply with their
accreditation requirements.
Confirmatory testing should be conducted on fresh cultures from mCCDA agar plates
immediately following incubation and presumptive count.
4.10.4.1 Oxidase/Latex confirmation
Select five characteristic colonies ensuring that any variation in colony size and shape is
included in the selection (or all colonies if there are less than 5 colonies).
a. Screen all 5 colonies for oxidase activity. Record result.
b. On the first colony that is oxidase positive carry out a latex agglutination test for
Campylobacter. The latex agglutination test confirms three Campylobacter species: C.
December 2012 84 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
jejuni, C. coli, and C. lari. If the latex test is positive assume all 5 are Campylobacter
positive. If not conduct the latex test on the remaining oxidase positive colonies.
c. PCR may be used as an alternative to the latex agglutination assay confirmatory test.
d. If none of the five characteristic colonies selected confirm as Campylobacter, select a
further five atypical colonies and repeat steps (a-c). If there are no atypical colonies
present no further confirmation is required.
e. Small colonies may not contain enough cells for the oxidase test and latex test. It is
recommended that small colonies are subcultured to blood agar prior to confirmation.
Validation: Once a week choose a set of 5 characteristic Campylobacter colonies from
mCCDA agar plates that are oxidase positive and test all 5 with latex to validate the
presumption that an oxidase positive test will be latex positive.
Table 28: Example of confirmatory results by Oxidase/Latex
Typical colonies selected
Oxidase Latex Result per colony
1 positive Positive Campylobacter
2 positive Presume remaining oxidase positive are latex positive
Campylobacter
3 positive Campylobacter
4 positive Campylobacter
5 positive Campylobacter
Where the first oxidase positive colony selected of 5 records a latex negative result:
Typical colonies selected
Oxidase Latex Result per colony
1 negative not conducted Negative
2 positive Negative Negative
3 positive Positive Campylobacter
4 positive Positive Campylobacter
5 negative not conducted Negative
4.10.4.2 Confirmation and species identification as per MIMM sections 7.3.7 and 7.3.8
Select five characteristic colonies as per 4.10.4.1 (or all colonies if there are less than five
colonies).
a. For each colony carry out gram stain, motility, oxidase, hippurate hydrolysis and
antibiotic sensitivity using Nalidixic acid and Cephalothin as per MIMM sections 7.3.7 and
7.3.8.
b. Record as positive colonies that are gram stain negative with small “gull” shaped rods,
exhibiting wet mount motility, are oxidase positive and where the hippurate hydrolysis
result and antibiotic sensitivity confirm positive as C. jejuni, C. coli or C. lari.
December 2012 85 Schedule 1 National Microbiological Database Programme
Laboratory Analysis
c. If none of the five characteristic colonies selected confirm as Campylobacter, select a
further five atypical colonies and repeat steps (a-b). If there are no atypical colonies
present no further confirmation is required.
Table 29: Example of confirmatory results by MIMM
Colonies Selected MIMM 7.3.7 and 7.3.8 confirmation and species identification to C. jejuni, C. coli or C. lari
Result per colony
1 C. jejuni Campylobacter
2 Negative Negative
3 C. coli Campylobacter
4 C. jejuni Campylobacter
5 C. jejuni Campylobacter
4.10.5 Reporting results
Final count:
• If no thermotolerant Campylobacter spp colonies were confirmed report as “not
detected”. Refer to section 5.4, Table 30.
• Where thermotolerant Campylobacter spp colonies were confirmed the counts
obtained must be calculated according to section 5.2.2.
Report result as per the other NMD poultry analysis (Salmonella).
December 2012 86 Schedule 1 National Microbiological Database Programme
Results and Formulas
5. Results and Formulas
5.1 Result Calculation (Manual) Red Meat
Calculate the number of colony forming units (CFU) per cm2 or per g using the following
formulae.
Note:
1. That the swab suspension is not a dilution and is entered into calculations as the 100
dilution or zero dilution (non-diluted).
2. Although the whole tissue suspension is a 1:10 dilution, in order to maintain consistency
in plate labelling it is entered into calculations as the 100 dilution or zero dilution.
3. The dilution series values for the calculations below are to be mathematically expressed
as 100, 10-1, 10-2, 10-3, 10-4… Refer to section 4.1.
5.1.1 Aerobic plate count (spread plate)
Swab samples – 100cm2 area and 15ml suspension volume
Swab samples – 25cm2 area and 15ml suspension volume
Swab samples – 5cm2 area and 10ml suspension volume
Whole tissue samples – 25g sample + 225ml diluent = 250ml total volume
2 100cm
15ml x
0.1ml
1 x
Dilution
1 x
2
2 Count 1 Count = cm sq. / CFU
+
2 25cm
15ml x
0.1ml
1 x
Dilution
1 x
2
2 Count 1 Count = cm sq. / CFU
+
2 cm 5
10ml x
0.1ml
1 x
Dilution
1 x
2
2 Count 1 Count = cm sq. / CFU
+
25g
250ml x
0.1ml
1 x
Dilution
1 x
2
2 Count 1 Count = g / CFU
+
December 2012 87 Schedule 1 National Microbiological Database Programme
Results and Formulas
5.1.2 Aerobic plate count (PetrifilmTM)
Swab samples – 100cm2 area and 15ml suspension volume
Swab samples – 25cm2 area and 15ml suspension volume
Swab samples – 5cm2 area and 10ml suspension volume
Whole tissue samples – 25g sample + 225ml diluent + 250ml total volume
5.1.3 Aerobic plate count (spiral plater)
Calculate the number colony forming units per cm2 or per g using the procedures outlined in
the spiral platers operating instructions. The typical volume for the inoculum is 50µl = 0.05ml
or 100µl = 0.1ml.
Swab samples – 100cm2 area and 15ml suspension volume
Swab samples – 25cm2 area and 15ml suspension volume
Swab samples – 5cm2 area and 10ml suspension volume
2 5cm
10ml x
ml Inoculum
1 x
Dilution
1 x
2
2 Count 1 Count = cm sq. / CFU
+
2 100cm
15ml x
1ml
1 x
Dilution
1 x
2
2 Count 1 Count = cm sq. / CFU
+
2 25cm
15ml x
1ml
1 x
Dilution
1 x
2
2 Count 1 Count = cm sq. / CFU
+
2 5cm
10ml x
1ml
1 x
Dilution
1 x
2
2 Count 1 Count = cm sq. / CFU
+
2 100cm
15ml x
ml Inoculum
1 x
Dilution
1 x
2
2 Count 1 Count = cm sq. / CFU
+
2 25cm
15ml x
ml Inoculum
1 x
Dilution
1 x
2
2 Count 1 Count = cm sq. / CFU
+
25g x
1ml
1
Dilution
1
2
2 Count 1 Count = g / CFU
+ x x
250ml
December 2012 88 Schedule 1 National Microbiological Database Programme
Results and Formulas
Whole tissue samples – 25g sample + 225ml diluent = 250ml total volume
5.1.4 Escherichia coli (PetrifilmTM)
Swab samples – 100cm2 area and 15ml suspension volume
Swab samples – 25cm2 area and 15ml suspension volume
Swab samples – 5cm2 area and 10ml suspension volume
Whole tissue samples – 25g sample + 225ml diluent = 25ml total volume
5.2 Result Calculation (Manual) Poultry
Calculate the number of colony forming units (CFU) per carcass of rinse sample using the
following formulae.
5.2.1 Campylobacter enumeration
For counts obtained from 2ml spread over six (6) plates:
CFU/carcass = *(number colonies confirmed as Campylobacter/n) x count characteristic
Campylobacter morphology colonies (plate 1 + plate 2 + plate 3 + plate 4 + plate 5 + plate 6)
x 400ml/2ml
= number of Campylobacter organisms/poultry carcass sample.
For duplicate plates of higher dilutions:
CFU/carcass = *(number colonies confirmed as Campylobacter/n) x count characteristic
Campylobacter morphology colonies (plate 1 + plate 2)/2 x 400ml/0.1ml x 1/dilution
= number of Campylobacter organisms/poultry carcass sample.
n = number or characteristic colonies examined, usually 5 unless there are less than 5
characteristic colonies altogether.
25g
250ml x
ml Inoculum
1 x
Dilution
1 x
2
2 Count 1 Count = g / CFU
+
2 100cm
15ml x
ml 1
1 x
Dilution
1 x
2
2 Count 1 Count = cm sq. / CFU
+
2 25cm
15ml x
ml 1
1 x
Dilution
1 x
2
2 Count 1 Count = cm sq. / CFU
+
2 5cm
10ml x
ml 1
1 x
Dilution
1 x
2
2 Count 1 Count = cm sq. / CFU
+
25g
250ml x
ml 1
1 x
Dilution
1 x
2
2 Count 1 Count = g / CFU
+
December 2012 89 Schedule 1 National Microbiological Database Programme
Results and Formulas
* Usually five/five if the first colony of five is confirmed as positive. Will be a proportion of
five if the remaining colonies are required to be confirmed e.g. three/five.
5.3 Result Calculation (Automated)
Laboratories and operators must use web based data entry or other that would generate
NMD data for submission to NMD in an equivalent manner. The web based data entry takes
raw counts and dilution data and automatically performs all calculations, provides descriptive
statistics, and graphical profiles, and provides an ongoing database for storage of
information.
5.3.1 Procedure
Enter premises demographics and sample descriptors such as shift, day, time of day, etc., by
selecting check boxes, etc., within the spreadsheet.
Enter data into web based data entry or Microsoft Excel spreadsheet. Follow instructions
supplied with the software.
Authorise results:
a. Laboratory – Reconcile data entered into the spreadsheet against the laboratory
workbook, and sign off by the LAS signatory.
b. Premises – Where premises personnel independent of the laboratory enter authorised
laboratory results into the spreadsheet, the results for submission to the NMD must be
signed off by authorised, technically competent premises personnel.
5.4 Limits of Detection
Not detected results are considered to be results less than the lowest limit of detection
(LLD), which is Count plate 1 = 0, Count plate 2 = 1 (or vice versa) on a zero dilution pair of
duplicates.
Note: Because CFU/cm2 results (arithmetic) are transformed to logarithmic Log CFU/cm2
results for NMD reporting all results above the LLD, even though they may be negative
logarithmic values, are to be considered as detections/counts. For example the LLD value of
0.075 CFU/ cm2 for a PetrifilmTM E. coli 100 cm2 sample site converts to – 1.12 Log CFU/ cm2
which represents a count, a detection, even though it is a negative log value.
The values used to represent LLD and “not detected” results in the NMD database are listed
in the table below.
December 2012 90 Schedule 1 National Microbiological Database Programme
Results and Formulas
Table 30: Limits of detection
Lowest Limit of Detection Value “Not Detected”
APC CFU/cm2 or /g
APC Log10 value
E. coli CFU/cm2 or /g or /ml
E. coli Log10 value
Log10 value
Spreadplate 0.1ml
5cm2
25cm2
100cm2
Bulk Meat (25g)
10
3
0.75
50
1.00
0.48
-0.12
1.70
Not applicable
Not applicable
-0.31
-0.53
-1.13
-0.31
PetrifilmTM 1ml
5cm2
25cm2
100cm2
Bulk Meat (25g)
1
0.3
0.075
5
0.00
-0.52
-1.12
0.70
1
0.3
0.075
5
0.00
-0.52
-1.12
0.70
-0.31
-0.53
-1.13
-0.31
Spiral plater 50µl
5cm2
25cm2
100cm2
Bulk Meat (25g)
20
6
1.5
100
1.30
0.78
0.18
2.00
Not applicable
Not applicable
-0.31
-0.53
-1.13
-0.31
Campylobacter direct plating
CFU/carcass
Log10 value per carcass
“Not detected” Log10 value per carcass
2ml 200 2.30 2.00
If the number of colonies on the highest dilution plate exceeds the maximum allowable
count; for example>300 APC spreadplate,>150 PetrifilmTM E. coli enter that result as TNTC.
Such a result is classified as a “too numerous to count” (TNTC) technical failure.
Notwithstanding omission from the database, the result must be regarded as a “detection”
and/or “higher than expected count” when assessing compliance with premises performance
criteria under HACCP and RMPs.
The TNTC result must still be used at premises level for assessing compliance with “in-
house” targets and HACCP performance criteria.
For mCCDA Campylobacter where the colonies on the highest dilution plate exceed the
maximum allowable count the result must be classified as TNTC, reported and will default to
a greater than 3.78 Log10 CFU/carcass result of 3.79 Log10 CFU/carcass on the database.
See section 6.8.1.
December 2012 91 Schedule 1 National Microbiological Database Programme
Results and Formulas
5.5 Reporting of Results
5.5.1 General requirements
The following are general requirements for process and sample descriptors to be used for
reporting results:
• All reports to the NMD must clearly indicate the premises from which samples were
taken and any required process descriptor.
• All reports to the NMD must have complete sample description information
according to the product.
• Red Meat: species, APC method used, sampling week, class, shift, time, boning
process, cut product description, cervine cuts (skinned or not skinned), bulk meat
VL/CL grade, bulk product description, chiller identification, chilling period of time.
• Poultry: sample date, shift, sample time, method of drainage, carcass rinse location,
1% Tween 80 addition, rinse diluent temperature, carcass to laboratory time (when
carcass is transported from the premises to be rinsed in the laboratory), time
analysis initiated, cut number, average age of birds, farm reference number, shed
number.
• Results are to be submitted to NMD in the required format, in Log10cfu/cm2 or /g, /ml
or carcass units, or “detected”/”not detected” for pathogen presence/absence tests.
• If colonies are not detected express the results as the “not detected” assigned value
e.g. -1.13, -0.53, -0.31.
• Results must be entered directly by web based data entry to MPI.
• Data provided manually will not be accepted unless agreed by the NMD
Administrator.
• Entering a subset of results from more substantial sampling programme is allowed.
However, in order to avoid biasing the NMD, the samples from which results would
be entered must be selected prior to collection of the samples, as per random
sample selection, not after the results had been obtained.
5.5.2 Reporting for the database to premises and use of data
The NMD administration must:
• Post on the MPI web site, summary reports to the NMD National Microbiological
performance profiles on a quarterly basis.
• Use the RMP identifier when reporting the ranked list to the operator.
Quarters for reporting are defined as follows:
1st Quarter: January 1 – March 31
December 2012 92 Schedule 1 National Microbiological Database Programme
Results and Formulas
2nd Quarter: April 1 – June 30
3rd Quarter: July 1 – September 30
4th Quarter: October 1 – December 31
• Provide reports as soon as possible after completion of a quarter, preferably within
one (1) month.
• hold results from individual premises in the strictest confidence from other
contributors. Individual premises data will only be available to the operator who
provided it, and any LAS approved laboratory supplying data on behalf of the
operator.
December 2012 93 Schedule 1 National Microbiological Database Programme
Targets – Premises Analysis and Interpretation, Independent Verification
6. Targets – Premises Analysis and
Interpretation, Independent Verification
6.1 Premises Level Targets
All premises shall set premises level microbiological targets (all species) and Salmonella
performance standards (excluding ovine species), and present NMD data in a manner that
facilitates early identification and visualization of loss of process control.
6.2 Bovine Species NMT: Escherichia coli Moving Window
The NMT consist of two levels of target administered on an ongoing basis by the operator:
Moving window (m) based on the percentage of samples that exceed the 80th percentile. For
bovine E. coli the 80th percentile approaches not detected. Thus E. coli detected/not detected
(presence/absence) is used as the limit. For m-alerts a carcass is considered a single entity. A
detection of E. coli on any carcass site renders the carcass as a whole as detected.
An upper limit (M) based on the 98th performance percentile (M) of E. coli numbers, as specified
in the US Pathogen Reduction/HACCP Final Rule (“MegaReg”), which is 100cfu/cm2. This is
converted to logarithmic notation for NMT purposes.
100cfu/cm2 = 2.00 log10cfu/cm2. Results from each carcass site are considered separately. The
3 carcass site results are not composited.
6.2.1 NMT (bovine species): Escherichia coli moving window (m)
A five (5) sample increment “moving window”. Addition of 5 new samples to the bottom of the
window displaces 5 samples from the top.
An overall window size of 15 samples (3 weeks). NMT shall be implemented for each
product: carcasses (post-slaughter and dressing), primal cuts, and bulk meats.
In this case, the carcass is considered a single entity. If any of the three sites of a carcass
are positive, the carcass as a whole is considered positive.
A premises may detect E. coli in four (4) samples of product type within the 15 sample (3 week)
window, without response.
Detection of E. coli in five (5) samples or more shall elicit an “Alert” response.
An “Alert” response shall consist of immediate review of the process by the operator to
identify and document factors, that may have compromised hygienic processing, and if
appropriate, take corrective and preventative action.
December 2012 94 Schedule 1 National Microbiological Database Programme
Targets – Premises Analysis and Interpretation, Independent Verification
MPI VA need not be notified. However, the company response to an “Alert” shall be verified
during routine MPI VA audits.
6.2.2 NMT (bovine species): Escherichia coli upper limit (M)
A NMT must be implemented for each bovine product: carcass post slaughter and dressing,
primal cuts, and bulk meats. This NMT must be implemented for each site on the bovine
carcass; thus there are three (3) sets of five (5) results for carcasses each week, five (5)
rump (hindleg), five (5) flank and five (5) brisket sets of results to consider.
• For M-alerts results from each carcass site sample are considered separately. The
3 carcass site results are not composited.
• Premises may detect E. coli in numbers greater than 2.00 log10cfu/cm2 in one (1)
carcass site, cut or bulk sample for bovine product type in any given sampling week.
• Detection of E. coli in numbers greater than 2.00 log10cfu/cm2 in two (2) carcass
sites, cut or bulk sample, in a sampling week must elicit an “Alert” response.
Table 31: Carcass example (units 2.00 log10cfu/cm2)
Carcass Site Rump (hindleg) Flank Brisket
Carcass 1 >2.00 <2.00 <2.00
Carcass 2 >2.00 <2.00 <2.00
Carcass 3 <2.00 <2.00 <2.00
Carcass 4 <2.00 <2.00 >2.00
Carcass 5 <2.00 <2.00 <2.00
M-Alert Yes No No
Bovine carcasses must be listed with M-alert status if one or more carcass sites generate a
M-alert.
An “Alert” response must include immediate review of the process by the premises to identify
and document factors that may have compromised hygienic processing, and, if appropriate,
take corrective and preventative action.
The premises MPI VA verifier must immediately be notified, and must prior to company
review of the process, assess and approve the review procedures according to the principles
outlined in Section 5.10 (Processing Conformance) or IS-8 (ref. 5.1 & 5.2).
6.3 Bobby Calf NMT: Escherichia coli Moving Window
6.3.1 Bobby calf product types
For m-alerts a carcass is considered a single entity. The arithmetic (cfu/cm2) results from the
three separate carcass sites samples are composited by averaging and the expressing this
arithmetic average as a single log10cfu/cm2 results per carcass.
December 2012 95 Schedule 1 National Microbiological Database Programme
Targets – Premises Analysis and Interpretation, Independent Verification
For M-alerts results from each carcass site sample are considered separately. The 3
carcass site results are not composited.
Primal cut and bulk meat results are taken as individual sample results in log10cfu/cm2 or /g
units.
6.3.2 Bobby calf NMT 80th percentile m limits: Escherichia coli
Analysis of data from a 15 sample moving window, (15 carcass, 15 cuts and 15 bulk results)
canvassing 3 weeks is required. The addition of the 5 latest samples to the window
displaces the oldest dated 5 samples.
The m-alert limit is bases on the 80th percentile E. coli values of NZ industry 25cm2 bobby
calf data from July 2002 to December 2002.
Carcasses post slaughter and dressing 1.23 log10cfu/cm2 (whole carcass average)
Primal Cuts 0.32 log10cfu/cm2
Bulk meat 2.08 log10cfu/g A premises may detect E. coli >80th percentile limit in four (4) samples of a product type
within a 15 (3 week) sample window without response.
Detection of E. coli counts exceeding the 80th percentile in five (5) or more samples within a
15 sample (3 week) window for any product type shall elicit a m-alert response.
The m-alert response requires an immediate review of the process by the company to
identify and document factors that may have compromised hygienic dressing. Corrective
and preventative actions shall be taken if required.
MPI VA need not be notified. The company must record its responses to the m-alert, as this
will be reviewed during routine MPI VA audits.
6.3.3 Bobby calf NMT M limits: Escherichia coli
M-alerts apply to each carcass site of five (5) carcass samples, and five (5) cut and bulk
sample results (one week’s results). There are three (3) sets of five (5) results for carcasses
each week, five (5) fore rump, five (5) flank and five (5) fore leg sets of results to consider.
The bobby calf M-alert is based on the 98th percentile of E coli results from NZ industry
25cm2 bobby calf data from July 2002 to December 2002. The M value is set at not less
than the FSIS “M” of 100 cfu/cm2 = 2.00 log10cfu/cm2.
Carcasses post slaughter and dressing 2.11 log10cfu/cm2
Primal Cuts 2.00 log10cfu/cm2
Bulk meat 2.98 log10cfu/g Premises may detect E. coli in numbers greater than “M” in not greater than one (1)
sample for a bobby calf product type in any given sampling week (5 samples).
December 2012 96 Schedule 1 National Microbiological Database Programme
Targets – Premises Analysis and Interpretation, Independent Verification
Detection of E. coli in numbers greater than “M: in two (2) or more samples for any bobby
calf product type in sampling week (5 samples) shall elicit an M-alert response.
Table 32: Carcass example (units log10 cfu/cm2)
Carcass Site Fore Rump Flank Fore Leg
Carcass 1 >2.11 >2.11 >2.11
Carcass 2 <2.11 <2.11 <2.11
Carcass 3 <2.11 >2.11 <2.11
Carcass 4 <2.11 >2.11 <2.11
Carcass 5 >2.11 <2.11 <2.11
M-Alert Yes Yes No
Bobby calf carcasses must be listed with M-alert status if one or more carcass sites
generate an M-alert.
An M-alert response must include immediate notification to the MPI VA and immediate
review of the process by the premises to identify and document factors that may have
compromised hygienic processing. When factors are identified corrective and preventative
action is to be implemented.
MPI VA must, prior to company review of the process, assess and approve the review of
procedures according to the principles outlined in Section 5.10 (Processing Conformance)
of IS-8 (ref, 5.1 & 5.2).
6.4 Ovine NMT 95th Percentile m Limits: APC
The ovine species APC NMT requires analysis of APC data from a fifteen (15) sample
moving window; single Y-cut site, five (5) carcasses, three (3) week period. Addition of the 5
most recent samples to the window displaces the 5 least recent samples.
The ovine APC m-alert is based on the 95th percentile of APC results from NZ industry ovine
fresh lamb carcass Y-cut site 5cm2 APC data over two years of NMD data from the
beginning of January 2002 to the end of December 2003. The 95th percentile ovine APC m-
alert value over this range of results is 4.65 log10 CFU/cm2.
Detection of an APC value greater than “m” (4.65 log10 CFU/cm2) in three (3) or more
individual samples in a 15 sample (3 week) moving window is classified as an “m-alert”.
In contrast to the NMT for other species, the moving window “resets” on eliciting an “m-alert”.
Non-conforming samples (3 or more APC values greater than “m”) do not carry over into
subsequent sampling windows, i.e. they contribute towards just one “m-alert”.
Responses to ovine “m-alerts”:
1. First “m-alert”. Premises shall:
December 2012 97 Schedule 1 National Microbiological Database Programme
Targets – Premises Analysis and Interpretation, Independent Verification
• review the process,
• identity contributing factors,
• propose preventative measures, and
• reset window.
2. Second “m-alert” in the moving window immediately after the first “m-alert” Premises
must:
• inform MPI VA (premises level), who will review the process and the effectiveness
of the implementation of the preventative measures or changes proposed in
response to the first “m-alert”, and
• reset window.
3. Third “m-alert” in the moving window immediately after the second “m-alert” Premises
must:
• inform MPI, who will carry out an independent regulatory review,
• carry out a full review of HACCP plans,
• implement process changes as required,
• reset window.
Actions taken, including any sanctions, will be subject to ongoing verification of compliance.
6.5 NMT: Documentation and Record Keeping
All operators must document the system by which they monitor performance against the
NMT, and perform any required process reviews, according to the requirements of section
5.10 (Process Conformance) of IS-8.
Documentation must include:
• authorities;
• review procedures on notification of an “Alert”;
• corrective actions;
• preventative actions.
The verifier must validate documentation as per the requirements for implementation of IS-8,
and shall assess and approve the documented process review procedures prior to
implementation.
All operators shall record the results of review procedures and consequent corrective
and preventative actions implemented when exceeding a premises level target or on
notification of an “Alert”.
December 2012 98 Schedule 1 National Microbiological Database Programme
Targets – Premises Analysis and Interpretation, Independent Verification
All documents shall be reviewed during routine MPI VA verification audits.
6.6 Ranked List
6.6.1 Bovine and bobby calf
For bovine and bobby calf the percentage of APC results greater than the published national
80th percentile (Table 33) will be calculated for each premises each report quarter. Bovine
and bobby calf E. coli results will be compared against the values specified by the bovine
and bobby calf Escherichia coli NMT targets (sections 6.2 and 6.4) each quarter. Note that
for bovine E. coli the 80th percentile is taken as “not detected” and the percentage detected
is calculated for ranking purposes.
Table 33: Bovine and bobby calf APC national 80th percentile NMT limits
BOVINE3 BOBBY CALF4
Bovine Sites/Cuts/Bulk
Bovine APC NMT Bobby Calf Sites/Cuts/Bulk
Bobby Calf APC NMT
Carcass (rump hindleg) Carcass (flank) Carcass (brisket) Primal cuts Bulk meat
1.77 log10 CFU/cm2
1.69 log10 CFU/cm2
0.95 log10 CFU/cm2 2.01 log10 CFU/cm2 3.53 log10 CFU/g
Carcass (fore-rump) Carcass (flank) Carcass (foreleg) Primal cuts Bulk meat
2.03 log10 CFU/cm2 2.85 log10 CFU/cm2 2.13 log10 CFU/cm2 2.82 log10 CFU/cm2 4.07 log10 CFU/g
6.6.2 Ovine
Each quarter ranked lists will be published based on fresh carcass APC results for the
opening Y cut site. Premises will be ranked in descending order of the percentage of results
greater than the national profile ovine carcass opening Y cut APC 80th percentile all data to
date value.
Premises with percentage APC exceeding the 80th percentile that fall into the following
category
• greater than 2 x the average, and prevalence statistically (Chi-square) of P <0.05
will be bolded for microbiological performance information purposes only. Alerts as
described in section 6.6.4 will not be elicited.
3Derived from 100cm2 NMD data for the year to 31 December 2007.
4All bobby calf 25cm2 data from July 2002 to December 2002.
December 2012 99 Schedule 1 National Microbiological Database Programme
Targets – Premises Analysis and Interpretation, Independent Verification
6.6.3 Caprine, cervine, ostrich and emu and porcine
For cervine, caprine, ostrich and emu, and porcine the national profiles 80th percentile values
for APC and E. coli all data to date will be used to compare premises data against to compile
the quarterly ranked lists.
6.6.4 Ranking and alerts
Premises will be ranked in descending order of APC/E. coli prevalence based on the 80th
percentiles/NMT for the particular species. The average prevalence will be calculated.
Premises with percentage APC/E. coli exceeding the 80th percentile that fall into the
following two categories shall elicit an “Alert”:
• greater than 2 x the average, and prevalence statistically (Chi-square) of P <0.05
• less than 0.5 x the average, and prevalence statistically (Chi-square) of P<0.05
Premises that elicit an upper or lower “Alert” shall be highlighted in bold on a ranked list
issued by MPI on a quarterly basis.
6.6.4.1 Upper alert
Notified premises must review the process to identify and document factors that resulted in a
prevalence significantly higher than the industry average. The review is likely to result in
modification of process control programmes programmes (pre-requisite and HACCP).
6.6.4.2 Lower alert
A lower alert highlights a very low percentage prevalence. It is accepted that this result may
be a reflection of consistent application of good hygienic dressing practices by the premises
rather than any issue with implementation of the NMD sampling programme.
Notified premises must review the NMD sampling programme; in particular sample
collection, transportation (time/temperature), and laboratory procedures, to identify and
correct any deficiencies that may impact on microbiological results.
Where there are successive recurring lower alerts and the following points are met, the MPI
verifier may decide that further reviews are no longer required:
• There is a history of compliance with NMD microbiological sampling requirements;
and
• Review of both past approved laboratory audits (refer NMD Notice clause 10, sub
clause (5)), and NMD verifications completed by the MPI verifier are found to have
been acceptable;
If after a period time outside the lower alert category the premises ranked list includes a
lower alert then the review process must be reinstated.
December 2012 100 Schedule 1 National Microbiological Database Programme
Targets – Premises Analysis and Interpretation, Independent Verification
6.6.5 Poultry quarterly report ranked list
Poultry premises are ranked in descending order of their Campylobacter averages over the
last completed quarter.
Poultry premises are bolded high and low where the premises average is greater or less
than +/- 0.5 log10 CFU/carcass of the average of all poultry results for that quarter.
6.7 Salmonella Performance Standards (SPS)
6.7.1 Group 1 and porcine Group 2– Salmonella performance standard
Absence of Salmonella is the desired objective, and the presence of these organisms must
not be overlooked, if and when detected. The contributing factors and source of Salmonella
must be investigated.
Upon detection of Salmonella the operator must undertake the following actions addressing
product, livestock and personnel:
• Immediately inform the MPI VA verifier of the detection.
• Ensure the laboratory has submitted purified cultures of isolates detected to ESR
Enteric Reference Laboratory at National Centre for Biosecurity and Infectious
Disease (NCBID), Wallaceville for serotypic confirmation.
• Ensure records from the original product sampled are traced back to the catchment
area of the stock being processed.
• Consult the laboratory(s) providing an animal health service in the stock catchment
area, and inquire as to any increase in reported cases of animal salmonellosis.
• Determine if symptoms of salmonellosis have been reported by any personnel.
In addition to the above actions related to product, livestock and personnel the operator must
undertake the following process responses which escalate according to the frequency of
Salmonella detections in the season.
Monitoring and control of this pathogen is also of interest to overseas authorities. The
appropriateness of country listings of an operator will be reconsidered by MPI VA when there
are ongoing detections of Salmonella at the premises.
6.7.1.1 First detection
On the first detection for the season in a PSW or SSW the operator must:
• Review the entire process.
• Identify contributing factors.
• Implement corrective and preventative measures.
December 2012 101 Schedule 1 National Microbiological Database Programme
Targets – Premises Analysis and Interpretation, Independent Verification
6.7.1.2 Second detection
On the second detection in a subsequent PSW or first PSW following a first detection in a
SSW the operator must:
• Under take a further review as per the first detection.
• Review the effectiveness of the corrective and preventative actions implemented in
the first detection.
• Ensure any new or existing preventative and corrective actions are implemented.
• Inform the MPI VA primary verifier, who will review the process and the effectiveness
of the operator’s actions in response to the first and second detections.
6.7.1.3 Third detection
On the third detection in a subsequent third PSW or second PSW if the first detection was a
SSW the operator must:
• Undertake a further review as per the first detection.
• Carry out a full review of HACCP plans.
• Reassess the effectiveness of corrective and preventative actions implemented in
the first and second detections.
• Implement further corrective and preventative actions to address previous or newly
identified contributing factors.
• The premises shall submit a Salmonella Management Plan, describing
process/HACCP reviews and the measures implemented to reduce the prevalence
of pathogens, to MPI VA.
The MPI VA verifier must:
• Review operator corrective and preventative actions; and
• Review the operators Salmonella Management Plan and submit to MPI VA
Specialist Advisor.
Actions taken, including any sanctions, will be subject to ongoing verification of compliance.
6.7.2 Group 3 – Salmonella performance standard
The Poultry Salmonella performance standard is based on the US Performance Standard.
Operators are recommended to monitor the prevalence of Salmonella according to the US
Performance Standard, PR/HACCP Salmonella Performance Standards described in Table
2 Federal Register/Volume 61, No. 144 page 38867.
December 2012 102 Schedule 1 National Microbiological Database Programme
Targets – Premises Analysis and Interpretation, Independent Verification
The US Standard states that Salmonella may be detected in no more than 12 of 51
consecutive poultry samples.
It is recommended that on breaching the US Performance Standard operators immediately
review the process and livestock Salmonella status to identify and document factors that
resulted in breach of the performance standard. This may lead to modification of process
control programmes (pre-requisite and HACCP).
6.8 Poultry Campylobacter Performance Target (CPT)
The poultry Campylobacter performance target (CPT) consists of two regulatory limits
requiring Campylobacter analysis of poultry broiler carcass rinse samples over set
processing periods as follows:
• Standard processing premises, a total of three samples must be taken per
processing day. Each of the three samples must be collected at a separate
randomly selected sampling time per processing day. A processing period is five
days processing equalling a total of 15 samples.
• Very low throughput (VLT) premises, a total of three samples on a single
randomly selected day of one processing week must be randomly selected over
available processing times. A processing period is one processing week equalling a
total of three samples.
Table 34: Table of CPT sampling requirements
Sampling period Standard throughput Very low throughput (VLT)
A moving window of
three processing
periods.
45 samples over 15
processing days.
9 samples over 3 weeks.
The moving window is defined as three processing periods. The addition of the samples of
the latest processing period displaces the samples of the oldest processing period.
Two CPT regulatory limits are used to determine compliance over each moving window:
• Number of samples with a result of greater than 6000 CFU/carcass, 3.78
log10CFU/carcass and
• Number of positive samples; those samples with a result of 2.30 log10CFU/carcass
or higher representing Campylobacter detection.5
5 A ‘not detected’ Campylobacter result will be recorded as 2.00 log10CFU/carcass on the
NMD database.
December 2012 103 Schedule 1 National Microbiological Database Programme
Targets – Premises Analysis and Interpretation, Independent Verification
Transitional arrangements:
The new requirements in this Schedule will be implemented from Monday 7 January 2012.
The first processing period under the new system will start on the first day of processing on
or after that date. All premises will be reset to “compliant” on that date.
6.8.1 Recording of sample descriptors and default results
Each sample must have its sample descriptors recorded on the NMD database; sample time,
farm reference number, shed number, cut number and average age of birds in that cut.
Failure to sample
If less than the required number of samples have been collected during a processing period
the missed samples will each default to a greater than 3.78 log10 CFU/carcass result
recorded as 3.79 Log10 CFU/carcass on the database.
Technical Failures
Samples which have been collected, but where a technical failure (TF) has not permitted a
result the sample descriptors must be entered as proof of sampling with TF recorded in the
result field. Entering the sampling descriptors of samples taken ensures that a 3.79 default
result is not generated.
Too numerous to count results
Too numerous to count (TNTC) results must be reported. Each TNTC result will default to a
greater than the 3.78 log10 CFU/carcass result; recorded as 3.79 Log10 CFU/carcass on the
database.
6.8.2 CPT non-compliance
There are two classes of CPT non-compliance
(1) Enumeration Failure (EF):
An EF will be generated upon detection of a value greater than 6000 CFU per carcass
(3.78 log10CFU/carcass) in:
a. Standard throughput: premises: seven (7) or more out of 45 individual
carcass samples taken from a 3 successive processing period moving
window; OR
b. VLT premises: two (2) or more out of 9 individual carcass samples taken
from a 3 successive processing period moving window.
(2) Detection Failure (DF)
December 2012 104 Schedule 1 National Microbiological Database Programme
Targets – Premises Analysis and Interpretation, Independent Verification
A DFwill be generated upon a result of 2.30 log10CFU/carcass or greater in:
a. Standard throughput: premises: 30 or more out of 45 individual carcass
samples taken from a 3 successive processing period moving window; OR
b. VLT premises: Six (6) or more out of 9 individual carcass samples taken
from a 3 successive processing period moving window.
If the premises has an EF, a DF or both for a moving window it is counted as one non-compliant
window. Responses to CPT escalate according to the number of consecutive non-compliant
moving windows. To clear the non-compliance a moving window without an EF and without a DF
is required. The database then resets to zero to show that the premises is compliant.
Note that a noncompliance will be recorded in the database as soon as the EF or DF becomes
evident (which may be before the results from all samples for that moving window have been
entered). This enables corrective actions to be initiated at the earliest opportunity.
6.8.3 Required responses to CPT non-compliance
The premises NMD controller must check the NMD results at least once every processing period to
determine whether or not the premises is CPT compliant.
The NMD Controller must notify the operator and the MPI-assigned verifier within 24 hours of
determining each non-compliant moving window.
Responses escalate with each consecutive non-compliant moving window. With each non-
compliant moving window the investigations, corrective actions undertaken and further actions
planned to restore control must be recorded by the NMD Controller in the NMD ledger.
The following responses must be undertaken.
Consecutive non-
compliant moving windows
Response Required
1 Within 1 week of a noncompliant window being reported in NMD:
• the NMD Controller must:
o notify the Operator and the , MPI-assigned premises
verifier, and
o indicate that this has been done in the NMD ledger, and
• the Operator must initiate corrective actions to restore control.
2 As soon as a 2nd consecutive noncompliant window is reported in NMD:
• the NMD Controller must notify the Operator, and
• the Operator must document the investigations done, corrective
actions taken to date and further actions planned to restore
December 2012 105 Schedule 1 National Microbiological Database Programme
Targets – Premises Analysis and Interpretation, Independent Verification
control, and
• the Operator must copy this information to the MPI-assigned
premises verifier, and
• the NMD Controller must indicate that this has been done in the
NMD ledger.
As soon as possible the MPI- assigned premises verifier must:
• review the actions and if necessary visit the premises or ask for
additional information to ensure that the actions are appropriate,
and
• indicate that this has been done in the NMD alert screen, and
• report any concerns to nominated MPI managers/technical
people.
If the MPI-assigned premises verifier or an MPI manager/technical person
is not satisfied that the actions are appropriate they may notify this to an
appropriate MPI Director who may require an immediate response as per
7 consecutive non-compliant windows.
3 As for non-compliance 2 with information updated on the NMD ledger by
both the NMD controller and the MPI-assigned premises verifier.
4 As for non-compliance 3 with information updated on the NMD ledger by
both the NMD controller and the MPI-assigned premises verifier.
5 As for non-compliance 4 with information updated with information
updated on the NMD ledger by both the NMD controller and the MPI-
assigned premises verifier.
6 As for non-compliance 5 with information updated on the NMD ledger by
both the NMD controller and the MPI-assigned premises verifier.
The operator must document any product disposition options they could
implement in order to minimise the risk of contaminated product reaching
the consumer. The product disposition options must be provided to the
MPI-assigned premises verifier.
December 2012 106 Schedule 1 National Microbiological Database Programme
Targets – Premises Analysis and Interpretation, Independent Verification
Responses to be undertaken continued:
Non-compliant
moving window
Expected response
7 As for non-compliance 6 with information updated on the NMD ledger by
both the NMD controller and the MPI-assigned premises verifier.
The MPI-assigned premises verifier must:
• provide all information received to date to a nominated MPI
Campylobacter expert.
The MPI Campylobacter expert must:
• review the actions taken and the results to date then recommend
to an MPI Director whether or not to initiate a Campylobacter
Response Team (CRT) visit to the non-compliant premises and
which experts should be in the team.
The MPI Director must:
• sign-off the decision to initiate the CRT visit, and nominate a CRT
Leader and any other relevant experts to form the team, or
• sign a statement declining the recommendation with associated
justification.
If authorised by the MPI Director, the CRT must visit the premises at the
first available opportunity to:
• review all actions to date and recommend to the Operator other
corrective actions likely to bring the premises into compliance,
and
• where necessary, require corrective actions;
• where necessary, recommend the application of sanctions as per
non-compliance level 8 under Section 89 of the Animal Products
Act 1999 to protect the consumer.
The Response Team Leader must:
• provide a report to the Operator summarising the visit findings, a
required action plan and recommendations.
• copy the report to the MPI-assigned premises verifier, and the
MPI Director who approved the visit.
The Operator must:
December 2012 107 Schedule 1 National Microbiological Database Programme
Targets – Premises Analysis and Interpretation, Independent Verification
• comply with the required action plan unless an alternative is
agreed and signed off by the Response Team Leader and copied
to the premises verifier, and
• consider the recommendations.
The MPI-assigned premises verifier must:
• monitor the actions taken and
• report any concerns to the CRT Leader.
If actions are not taken as agreed then non-compliance 8 response is
required.
8 MPI must apply sanctions under Section 89 of the Animal Products Act to
protect the consumer. The sanctions may include, but are not limited to
one or more of the following:
• Revisit(s) by the CRT and further required actions /
recommendations by the CRT
• Increased verification
• Full-time supervision of processing
• Introduction of further interventions
• Product disposition
• Further sampling and research initiatives and
• Premises closure.
When any of the above sanctions are applied they must remain in place
until revoked by an Animal Products Officer
• After the premises has a compliant moving window or
• At the direction of an MPI Director.
December 2012 108 Schedule 1 National Microbiological Database Programme
Targets – Premises Analysis and Interpretation, Independent Verification
6.9 Verification Requirements
MPI VA/the verifier must verify that premises comply with the NMD Programme according to
the Performance-Based Verification procedures to be issued by MPI. In addition, on two
occasions in each processing season (Oct 1 to Sept 30), NZFSA VA/the verifier shall verify
the collection, packaging and reporting of a complete NMD sample set against the NMD
specification, by:
• observing the rotational and/or random selection of sampling day, shift, run, time and
carcass/cut/carton to be sampled.
• observing the collection of samples, including documentation of sample descriptors
and chronological information.
• apply a MPI carton seal to a set of NMD samples to permit a check with the
receiving laboratory to verify samples are received in the correct
condition/temperature and that analyses are commenced in the required time from
time of sampling.
• observing the storage of samples prior to packaging, and subsequent packaging of
samples for transport.
• requesting and observing the laboratory records and reports for samples transported
under the MPI carton seal.
• observe and verify chiller exit sampling.
• confirm submission of current demographics to NMD Administrator.
• confirm commencement of appropriate Salmonella sampling programme (16 week
PSW, 6 week SSW, or continuation of PSW requirements for the season).
• confirm reporting of Salmonella sampling programme results and completion of PSW
or SSW for the season.
• confirm implementation of Campylobacter sampling programme where required.
December 2012 109 Schedule 1 National Microbiological Database Programme
References
7. References
Animal Welfare (Broiler Chickens: Fully Housed) Code of Welfare, Biosecurity NZ, 25 July
2003.
AOAC (1990) Official Methods of Analysis of the Association of Official Analytical Chemists,
15th edition, Vol. 1, (ed. K. Helrich), Association of Official Analytical Chemists Inc., Arlington,
Virginia, USA.
Bell, R.G., J.C.L. Harrison and A.R. Rogers (1994) Distribution of microbial contamination on
beef and lamb carcasses. Proc. 28th Meat Industry Research Conference, Meat Ind. Res.
Inst. N.Z. Publ. No. 942.
Bell, R.G and S.C. Hathaway (1996) The hygienic efficiency of conventional and inverted
lamb dressing systems. J. App;. Bact. 81: 225-234.
Busta, F.F., E.H. Peterson, D.M. Adams and M.G. Johnson (1984) Colony count methods.
In: Compendium of Method for the Microbiological Examination of Foods, 2nd edition (ed.
M.L. Speck), pp.62-83, American Public Health Association, Washington DC.
Cook, R.L. (1991) Microbiological Methods of the Meat Industry, 2nd Edition. Meat Ind. Res.
Inst. N.Z., Publ. No. 873.
Donnison Procedures for Sampling, Handling & Storage of Campylobacter Isolates PDF 545
kb) July 2003.
Donnison Isolation of Thermotolerant Campylobacter – Review & Methods for New Zealand
Laboratories (PDF 1,809 kb) Revised May 2003.
FSIS, National Advisory Committee on Microbiological Criteria for Foods, Analytical Utility of
Campylobacter Methodologies, adopted September 28, 2005.
Hathaway, S.C. & R.L. Cook and P. van der Logt New Zealand National Microbiological
Database for “Minor Species” Summary of Findings and Recommendations for Sheep.
ICMSF (1978) Indicator microorganisms. In: Microorganisms in Food 1. Their Significance
and Methods of Enumeration. 2nd ed. Pp. 3-13. University of Toronto Press, Toronto.
ICMSF (1986) Microoganisms in Foods 2. Sampling for Microbiological Analysis: Principles
and Specific Applications. 2nd ed. International Commission on Microbiological
Specifications for Foods. University of Toronto Press, Toronto.
ISO (1990) General Requirements for the Competence of Calibration and Testing
Laboratories. ISO/IEC Guide 25:1990.
ISO 17604:2003 Microbiology of food and animal feeding stuffs – Carcass sampling for
microbiological analysis
December 2012 110 Schedule 1 National Microbiological Database Programme
References
Meat Industry Microbiological Methods Edition Four, March 2005, AgResearch, Hamilton,
New Zealand. Abbreviated as MIMM 2005.
Mills J. & H. Barea (2003), Effect of pre-enrichment incubation time on recovery of
Salmonella spp. – A Review, AgResearch Client Report (CR) 907.
MIRINZ (1971) MIRINZ Specification for conditioning and aging of beef. Meat Ind. Res. Inst.
N.Z. Publ. No. 227.
MIRINZ (1973) Specifications for lamb conditioning and aging. Meat Ind. Res. Inst. N.Z.
Publ. No. 303.
NZFSA December 2006, Proposal for Regulatory Monitoring for Campylobacter in Chickens
and on Poultry Meat.
Roberts, T.A., Hudson, W.R., Whelehan, O.P., Simonsen, B., Olgaard, K., Labots, H.,
Snijders, J.M.A., Van Hoof, J., Debevere, J., Dempster, J.F., Devereux, J., Leistner, L.,
Gehra, H., Gledel, J. & Fournard J. (1984) Number and distribution of bacteria on some beef
carcasses at selected abattoirs in some member states of the European Communities. Meat
Sci. 11, 191-205.
Stern, N.J., Line, J.E., Comparison of Three Methods for Recovery of Campylobacter spp.
From Broiler Carcasses, 1991.
Issued under section 167 of the Animal Products Act 1999.
Date of notification in Gazette:
This notice is administered in Ministry for Primary Industries.