recombinant azurin-cdse/zns hybrid structures for ...nbel.sogang.ac.kr/nbel/file/2017yagati...

8
Contents lists available at ScienceDirect Biosensors and Bioelectronics journal homepage: www.elsevier.com/locate/bios Recombinant azurin-CdSe/ZnS hybrid structures for nanoscale resistive random access memory device Ajay Kumar Yagati a,b , Sang-Uk Kim a , Taek Lee c , Junhong Min d , Jeong-Woo Choi a,e, a Department of Biomedical Engineering, Sogang University, Seoul, 04107, Republic of Korea b Department of Biomedical Engineering, Gachon University, Incheon, 21936, Republic of Korea c Institute of Integrated Biotechnology, Sogang University, Seoul, 06974, Republic of Korea d School of Integrative Engineering, Chung-Ang University, Seoul, 06974, Republic of Korea e Department of Chemical & Biomolecular Engineering, Sogang University, Seoul, 04107, Republic of Korea ARTICLE INFO Keywords: Biohybrid Recombinant technology Random access memory Electrical bistability Bioelectronic device ABSTRACT In the present study, we developed a biohybrid material composed of recombinant azurin and CdSe-ZnS quantum dot to perform as a resistive random access memory (ReRAM) device. Site specic amino acid sequences were introduced in azurin to bind with the surface of CdSe-ZnS nanoparticle allowing the formation of a hybrid and voltage-driven switching enabled to develop a resistive random access memory (ReRAM) device. The analytical measurements conrmed that the azurin and CdSe-ZnS nanoparticles were well conjugated and formed into a single hybrid. Further, reversible, bistable switching along with repeatable writing-reading- erasing processes on individual azurin/CdSe-ZnS hybrid at nanoscale was achieved on the hybrid device. The device was programmed tested for 50 cycles with an ON/OFF ratio and measured to be of three orders of magnitude. The developed device shown good stability and repeatability and operates at low voltages thus makes it promising candidate for future memory device applications. 1. Introduction While the semiconductor industry reaches to its fundamental and technological challenges, new solutions and technologies have been sought and evaluated (Wondrak, 1999). By employing innovative architectural methods, enhancement in device functionality and den- sity with increased switching speed can be achieved (You, 2014). Thus, with bionanoelectronics it is expected to achieve superior performance and with recent research on biomolecular processing (Lee et al., 2014) with memory operations (Yagati et al., 2013) assures the technological feasibility of this research led. However, the main obstacle for practical realization of bionanoelectronics is the interface that inte- grates the biological components to the microelectronic circuitry. In order to achieve ecient and versatile biohybrid devices there should be an excellent coupling between biological and inorganic components without any denaturation and should avoid complex fabrication methods. Conventionally, the conjugation between biomolecules and inorganic molecules with chemical linkers or electrostatic interactions often produce aggregates with poor control over the number of biomolecules attached to a single nanoparticle (Dirks et al., 2009; Katz and Willner, 2004). Semiconductor nanoparticles such as quantum dots (QDs) whose excitons are conned in all three spatial dimensions (Reed, 1993) and their electronic characteristics are closely related to the size and shape of individual QDs. Quantum connement plays an important in the electronic properties of QDs and possess discrete energy levels (Fischbein and Drndic, 2005). CdSe QDs are often capped with organic ligands which act as tunnel barriers for charge transport between adjacent particles. Core-shell type particles passivated with inorganic shell structures are more robust in comparison with organically passivated dots and also has greater feasibility towards processing and incorporation into various structures (Wilson et al., 1993). CdSe- ZnS nanoparticles are used as memory elements by observing charge trapping/detrapping events and Coulomb blockade (CB) at room temperature. It is reported that, if an electron tunneling through a very small capacitance junction encounters a charge of e/2< Q < e/2, then electrons will be blocked from tunneling until that charge has been shunted. Experiments on QDs show a zero-conductance region equal to E g +2E c , where E g is the band gap of the material and E c is the coulomb potential of a charge on the QD, also referred to as the charging energy (Hummon et al., 2010). Therefore, QDs are used memory elements by controlling the charge trap and release events. Azurin a well characterized redox protein from Pseudomonas aeruginosa, with excellent electron transfer and optical features which http://dx.doi.org/10.1016/j.bios.2016.11.037 Received 18 September 2016; Received in revised form 1 November 2016; Accepted 14 November 2016 Corresponding author. E-mail address: [email protected] (J.-W. Choi). Biosensors and Bioelectronics 90 (2017) 23–30 0956-5663/ © 2016 Elsevier B.V. All rights reserved. Available online 15 November 2016 crossmark

Upload: others

Post on 25-Jan-2021

5 views

Category:

Documents


0 download

TRANSCRIPT

  • Contents lists available at ScienceDirect

    Biosensors and Bioelectronics

    journal homepage: www.elsevier.com/locate/bios

    Recombinant azurin-CdSe/ZnS hybrid structures for nanoscale resistiverandom access memory device

    Ajay Kumar Yagatia,b, Sang-Uk Kima, Taek Leec, Junhong Mind, Jeong-Woo Choia,e,⁎

    a Department of Biomedical Engineering, Sogang University, Seoul, 04107, Republic of Koreab Department of Biomedical Engineering, Gachon University, Incheon, 21936, Republic of Koreac Institute of Integrated Biotechnology, Sogang University, Seoul, 06974, Republic of Koread School of Integrative Engineering, Chung-Ang University, Seoul, 06974, Republic of Koreae Department of Chemical & Biomolecular Engineering, Sogang University, Seoul, 04107, Republic of Korea

    A R T I C L E I N F O

    Keywords:BiohybridRecombinant technologyRandom access memoryElectrical bistabilityBioelectronic device

    A B S T R A C T

    In the present study, we developed a biohybrid material composed of recombinant azurin and CdSe-ZnSquantum dot to perform as a resistive random access memory (ReRAM) device. Site specific amino acidsequences were introduced in azurin to bind with the surface of CdSe-ZnS nanoparticle allowing the formationof a hybrid and voltage-driven switching enabled to develop a resistive random access memory (ReRAM) device.The analytical measurements confirmed that the azurin and CdSe-ZnS nanoparticles were well conjugated andformed into a single hybrid. Further, reversible, bistable switching along with repeatable writing-reading-erasing processes on individual azurin/CdSe-ZnS hybrid at nanoscale was achieved on the hybrid device. Thedevice was programmed tested for 50 cycles with an ON/OFF ratio and measured to be of three orders ofmagnitude. The developed device shown good stability and repeatability and operates at low voltages thusmakes it promising candidate for future memory device applications.

    1. Introduction

    While the semiconductor industry reaches to its fundamental andtechnological challenges, new solutions and technologies have beensought and evaluated (Wondrak, 1999). By employing innovativearchitectural methods, enhancement in device functionality and den-sity with increased switching speed can be achieved (You, 2014). Thus,with bionanoelectronics it is expected to achieve superior performanceand with recent research on biomolecular processing (Lee et al., 2014)with memory operations (Yagati et al., 2013) assures the technologicalfeasibility of this research filed. However, the main obstacle forpractical realization of bionanoelectronics is the interface that inte-grates the biological components to the microelectronic circuitry. Inorder to achieve efficient and versatile biohybrid devices there shouldbe an excellent coupling between biological and inorganic componentswithout any denaturation and should avoid complex fabricationmethods. Conventionally, the conjugation between biomolecules andinorganic molecules with chemical linkers or electrostatic interactionsoften produce aggregates with poor control over the number ofbiomolecules attached to a single nanoparticle (Dirks et al., 2009;Katz and Willner, 2004).

    Semiconductor nanoparticles such as quantum dots (QDs) whose

    excitons are confined in all three spatial dimensions (Reed, 1993) andtheir electronic characteristics are closely related to the size and shapeof individual QDs. Quantum confinement plays an important in theelectronic properties of QDs and possess discrete energy levels(Fischbein and Drndic, 2005). CdSe QDs are often capped with organicligands which act as tunnel barriers for charge transport betweenadjacent particles. Core-shell type particles passivated with inorganicshell structures are more robust in comparison with organicallypassivated dots and also has greater feasibility towards processingand incorporation into various structures (Wilson et al., 1993). CdSe-ZnS nanoparticles are used as memory elements by observing chargetrapping/detrapping events and Coulomb blockade (CB) at roomtemperature. It is reported that, if an electron tunneling through avery small capacitance junction encounters a charge of –e/2

  • make it an especially valuable candidate for bioelectronics applications(Yagati et al., 2009). Mostly, biohybrid materials composed of proteins,QDs have gained much attention because of their various applicationsin biosensors, drug delivery, and in development of memory devices(Portney et al., 2008; Tseng et al., 2006). Recently, resistive switchingrandom access memory (ReRAM) devices based on proteins (Wanget al., 2015b), natural organic material (Hosseini and Lee, 2015), Ptnanoparticles combined with ferritin (Uenuma et al., 2011), naturalsilk fibronin (Wang et al., 2015a, 2016) coupled with Au nanoparticles(Gogurla et al., 2013), memristive devices formed with egg albumenfilm (Chen et al., 2015) were developed. However, coupling recombi-nant azurin with CdSe-ZnS QDs has not yet been reported.

    Thus, we demonstrate a strategy for the formation of biohybridmolecule by incorporating genetically modified specific peptide se-quences in wild azurin to achieve recombinant azurin which has theability to couple Au surface and also enables direct coupling to CdSe-ZnS on outer shell to achieve a bio-inorganic hybrid structure for the

    development of a ReRAM device (Fig. 1). Analytical methods wereperformed to examine biohybrid formation and to assess the electricalproperties of hybrid molecules I-V measurements were conducted andapplied for the development of a nanoscale ReRAM device.

    2. Experimental details

    2.1. Materials and reagents

    To fabricate the resistive memory device, Au (111) coated Si (100)wafers were purchased from Inostek (Korea). CdSe-ZnS nanoparticlesand Lipoprotein were purchased from Sigma-Aldrich (USA). Alloligonucleotides were supplied by Bioneer (Korea). Ethanol, H2SO4,and 30% H2O2 were purchased from Daejung Chemicals and Metals CoLtd (Korea). The water used for all experiments was distilled anddeionized by Millipore [(Milli-Q) water (DDW > 18 MΩ)].

    Fig. 1. (a) Formation of recombinant protein from E.coli for the construction of azurin/CdSe-ZnS biohybrid and its experimental set-up for ReRAM application. (b) Strategicdevelopment for the formation of hybrid structure which possess the ability to (i) self-assembly of azurin on gold surface (ii) to couple CdSe-ZnS to azurin due to the incorporation ofNNPMHQN gene in azurin without any chemical linkers thus forming azurin/CdSe-Zns on Au surface.

    A.K. Yagati et al. Biosensors and Bioelectronics 90 (2017) 23–30

    24

  • 2.2. Construction of recombinant azurin gene

    To construct recombinant azurin gene with two cysteine groups andNNPMHQN peptide sequences, the genomic DNA from Pseudomonasaeruginosa ATCC (american type culture collection) 15692 wasextracted and purified using QIAamp DNA mini kit (Qiagen, USA).The azu gene was amplified by PCR from genomic DNA ofPseudomonas aeruginosa ATCC 15692. The forward primer andreverse primer were designed to include the NdeI restriction enzymesite, the EcoRI restriction enzyme site, respectively (Fig. S1). The PCRproduct was obtained and purified, using QIAquick gel extraction kit(Qiagen, USA), and digested with NdeI and EcoRI restriction enzymes(New England Biolabs, USA) (Fig. S2 (a)). The digested DNA fragmentwas ligated with a pET-21a(+)vector (Novagen, USA), which waspredigested with NdeI and EcoRI, using Quick ligation kit (NewEngland Biolabs, USA) (Fig. S2 (b)). The recombinant azurin geneencoding two cysteine-modified azurin (mazu1 gene) was amplified byQuikChange lightning multi-site-directed mutagenesis kit (Agilenttechnologies, USA), from the pET-21a (+) vector::azu gene.Continuously, the Azu Cys 1F, Azu Cys 1R, Azu Cys 2F, and Azu Cys2R primers were used to produce multi-site mutations for NNPMHQNsequences insertion (Fig. S1). The mazu1 gene was amplified by SOEusing PCR, from the pET-21a (+) vector::recombinant azurin gene thatgives the mazu2 gene. The QD 1F, QD 1R, QD 2F, and QD 2R primerswere used to insert NNPMHQN peptide sequence (Fig. S1). The correctincorporations of two Cys sequence and NNPMHQN peptide sequencewere confirmed by DNA sequence analysis, respectively (Fig. S2(c), S3).

    2.3. Expression and purification of recombinant azurin

    The recombinant azurin (MW 14.6 kDa) with modified genes wasexpressed from E. coli BL21 DE3 by recombinant DNA technology. Theplasmids, containing genes for recombinant azurin variant, weretransformed into E. coli BL21 (DE3). The transformants were grownto an optical density (OD) of 0.600 at 35 °C in shake flasks containing1 L of Luriae-Bertani medium (0.5% yeast extract, 1.0% tryptophan,and 1.0% NaCl) with 50 mg/mL ampicillin. Expression was induced byadding isopropyl b-D-thiogalactopyranoside (IPTG) to a final concen-tration of 0.840 mM. The transformed cells were grown for anadditional 16 h at 35 °C. The cells were harvested by centrifugationat 5000g for 20 min at 4 °C. The cell paste was resuspended in sucrosebuffer (20% sucrose, 0.3 M Tris-HCl, pH 8.1, 1.0 mM EDTA) andsubjected to osmotic shock (0.5 mM MgCl2). Undesired proteins wereprecipitated from the periplasmic preparation by decreasing the pH to3.8 (50 mM sodium acetate), yielding azurin-containing supernatant.Then, the recombinant apo-azurin fractions which did not containcopper were eluted (elution pH 4.6–4.8, respectively) on a CMexcellulose ion exchange column with a pH gradient ranging from4.0 to 5.0 (50 mM sodium acetate). CuSO4 (0.5 M×20 μl) was added tothe azurin solution and taken up by the recombinant apo-azurin for12 h at 4 °C with mixing. The recombinant azurin was purified andconcentrated by centrifugation at 4000g for 50 min at 4 °C with MWCO3k Amicon ultra-centrifugal filter (Millipore, USA).

    2.4. Device fabrication

    Au (111) substrates were kept in piranha solution (1:3) v/v, H2O2,and conc. H2SO4 for 4.0 min, rinsed thoroughly with distilled water,and then dried in an N2 stream. The recombinant azurin solution(10 µm) was then dropped onto the Au substrate for 6 h at 4 °C. Thethiol groups of two cysteine residues will enable anchoring of the Ausurface by covalent bonding. After washing with DI water, 20 µL ofCdSe-ZnS solution (10 µm) was immobilized on azurin directly inwhich ZnS outer shell can be bound with NNPMHQN sequences ofazurin.

    2.5. Electrical and optical characterizations

    STM measurements were performed with Digital InstrumentsMultimode STM with Nanoscope IV controller (Veeco Metrology, CA,USA). Measurements were conducted by using mechanically cut Pt/Irtips. For I-V measurements, the STM tip was located on desiredposition for bare Au, CdSe-ZnS, lipoprotein, and over a azurin/CdSe-ZnS nanoparticle hybrid. No additional force was applied to the tip andthe same set point of 0.5 nA with a bias voltage of 0.1 V was used for allexperiments.

    The UV–Vis optical absorbance of azurin, CdSe-ZnS, and azurin/CdSe-ZnS were measured by using an HP-8453 photodiode array(PDA) spectrophotometer (Agilent technologies) equipped with apeltier temperature controller.

    3. Results and discussion

    3.1. Production of recombinant azurin

    The formation of a bio-inorganic hybrid composed of azurincoupled with CdSe-ZnS was achieved by selecting a protein bindingmotif with specific recognition for the ZnS outer shell (Lee et al., 2002;Sarikaya et al., 2003). The Primers were used to substitute a Cysresidue at M13, K92 of azurin 128 residues using multiple site-directedmutagenesis (MSDM) and introduce Asn-Asn-Pro-Met-His-Gln-Asn(NNPMHQN) peptide sequence between L102 and K103 of azurin128 residues using splicing by overlap extension (SOE).

    The mazu1 gene (M13C, K92C) encoding two cysteine-modifiedazurin was performed from E. coli strain DH5α, which was used as thehost for sub cloning by site-directed mutagenesis (SDM) in a previousstudy (Lee et al., 2010). The thiol groups of two cysteine residues willenable anchoring of the Au surface by covalent bonding. General DNArecombinant techniques were employed throughout this experiment(Chung et al., 2013). The mazu1 gene was amplified by MSDM, fromthe pET-21a (+) vector::azu gene. The NNPMHQN peptide sequencewas inserted into mazu1 gene, which is confirmed to have a bindingaffinity to the ZnS surface. To introduce the NNPMHQN sequences tothe pET-21a (+) vector::mazu1 gene, we used SOE using PCR(Reikofski and Tao, 1992). SOE by PCR, as used in the presentresearch, involves three separate polymerase chain reactions (PCRs)(Fig. 2(a)): The QD 1F, QD 1R, QD 2F, and QD 2R primers wererequired for each construct of the two steps PCR reactions (Fig. S1).The QD 1F and QD 2R primers were designed to contain a NdeIrestriction enzyme site and a BamHI restriction enzyme site, respec-tively and the QD 1R and QD 2F primers were designed to generatefragments of overlapping sequences. One of the first step PCRsproduces a DNA fragment with NdeI restriction enzyme site (productA), and the other a DNA fragment with BamHI restriction enzyme site(product B). Fig. 2(b) shows first step products (product A, B) of SOEby PCR on agarose gel electrophoresis (lane 1: size marker, lane 2:product A, lane 3: product B). The two DNA fragments (product A, B)produced in the first step PCR reactions were mixed to form thetemplate for the second step PCR. The final product (SOE product) wasamplified by second step PCR. Fig. 2(c) shows second step products(SOE product) of SOE by PCR on agarose gel electrophoresis (lane 1:DNA size marker, lane 2: SOE product (annealing temperature: 53 °C),,lane 3: SOE product (annealing temperature: 55 °C).

    For the production of recombinant azurin, the mazu2 gene frag-ments were confirmed by gel electrophoresis on a 1.0% agarose gel(Fig. 2(d)). Lane 1 shows the DNA size marker. Lane 2 shows the pET-21a (+) vector (top band) and mazu2 gene (bottom band). Lane 3shows the Ligates of pET-21a (+):: mazu2 gene. The mazu2 gene wasverified by DNA sequencing (Fig. S3). From the result, the NNPMQHNsequences were found in the mazu2 gene along with M13C and K92C.The prepared mazu2 gene was cloned from of Pseudomonas aerugi-nosa genomic DNA. This gene was inserted into the pET-21a (+) vector

    A.K. Yagati et al. Biosensors and Bioelectronics 90 (2017) 23–30

    25

  • with NdeI, BamHI sites. The pET-21a (+) vector::mazu2 gene (psukim003) was transformed into E. coli BL21 (DE3). The transformants werethen expressed and purified. The purified recombinant azurin wasconfirmed using 12% sodium dodecyl sulfate-polyacrylamide gelelectrophoresis (SDS-PAGE). Fig. 2(e) depicts the SDS-PAGE result.Lane 1 shows the size marker and lane 2 shows the wild type azurin. Inthis case, the molecular weight is around 15.0 kDa. Lane 3 shows theband of recombinant azurin which shows slightly larger (around16.0 kDa) than wild type azurin owing to the additional peptideinsertion.

    The formation of recombinant azurin with three SDM was analyzedusing UV–Vis spectroscopy. It is observed that the absorption peak isin the visible region of the spectrum as shown in Fig. 2(f), the Cu (II)form of azurin is dominated by ligand to copper transitions, especiallyby those involving the cysteine ligand. The intense peak in the 625 nmpeaks were due to the ligand-to-metal-charge transfer transition,corresponding to the S(Cys)π → Cu(II)dx −y2 2 transition which has aband gap energy of 1.98 eV. Thus, the recombinant azurin has similarcharacteristics compared to wild-type azurin. This indicates thatrecombinant azurin with three site directed mutations was successfullyachieved and enabled for further experiments.

    3.2. Formation of azurin/CdSe-ZnS hybrid molecules

    Energy filtered transmission electron microscopy (EF-TEM) analy-sis on individual CdSe-ZnS nanoparticles and azurin/CdSe-ZnS con-jugates were performed to analyse the hybrid molecules. EF-TEMimages of the core-shell nanoparticles were presented which shows

    isolated particles over entire surface, having lattice spacing of the CdSecore of 0.22 nm. The size of the core-shell nanoparticles as estimatedfrom the images found to be around ~5 nm Fig. 3(a). The azurin/CdSe-ZnS conjugated surface depicts that many CdSe-Zns particles wereattached to the underlying protein molecules thus confirming theformation of biohybrid material. These hybrid molecules were foundover entire surface Fig. 3(b). Moreover, Energy dispersive analysis(EDA) on individual CdSe-ZnS nanoparticles and azurin/CdSe-Znsconjugates were performed to analyse the hybrid molecules. Elementalanalysis was performed to the CdSe-ZnS nanoparticles and azurin/CdSe-ZnS conjugates in Fig. 3(c) and (d). EDA for CdSe-ZnS nano-particles shows the presence of S, Zn, Se, Cd elements (Fig. 3(c)). Also,EDA spectrum for azurin/CdSe-ZnS conjugates shows the presence ofS, Zn, Se, Cd, and Cu elements (Fig. 3(d)). The AFM, UV–Vis and XPSexperiments were conducted to confirm the azurin/CdSe-ZnS hybrid inSupplementary materials (Fig. S4, S5).

    3.3. Electrical characteristics of azurin/CdSe-ZnS hybrid system

    The current-voltage (I-V) curves were measured for azurin/CdSe-ZnS and also on individual elements such as bare Au, CdSe-ZnS, andlipoprotein were measured at 295 K by positioning the STM conductivetip on the molecules without tunneling current feedback. The tunnelingcurrent was recorded while the tip-bias voltage was swept from ± 3 V.Fig. 4 shows electrical I-V properties of Au, CdSe-ZnS/Au, lipoprotein/Au, and azurin/CdSe-ZnS/Au electrodes respectively. In the case ofbare Au, a linear I-V characteristic (Ohmic behavior) was observed(Fig. 4a), obviously the bare Au substrate showed the general metallic

    Fig. 2. (a) Splicing by overlap extension (SOE) using PCR for site-directed mutagenesis. (b) Gel electrophoresis result of 1st Products by SOE (lane 1: size marker, lane 2: product A,lane 3: product B). (c) Gel electrophoresis result of 2nd Products by SOE (lane 1: size marker, lane 2: SOE product (annealing temperature: 53 °C), lane 3: SOE product (annealingtemperature: 55 °C)). (d) Construction of the the mazu2 gene (M13C, K92C, NNPMHQN) (lane 1: size marker, lane 2: Restriction: pET-21a (+) vector (vector), mazu2 gene (insert), lane3: Ligation: pET-21a (+):: mazu2 gene). (e) SDS-PAGE result of recombinant azurin (lane 1: size marker, lane 2: wild type azurin, lane 3: recombinant azurin). (f) UV–visible absorptionspectra of recombinant azurin.

    A.K. Yagati et al. Biosensors and Bioelectronics 90 (2017) 23–30

    26

  • conductor (linear) property. Further, CdSe-ZnS/Au (Fig. 4b) exhibitsthe nonlinear I-V properties, which is due to semiconductor nature thathas enough energy band gap resulting in a rectifying property in a two-terminal system. This forms a double-tunnel junction configurationhaving small resistive switching behavior; however, no hysteresis effectwas found in these measurements. Also, lipoprotein/Au (Fig. 4c)adsorbed substrate which doesn’t have any metal center in the protein,showed a minute nonlinearity in I-V curves. It is expected that,lipoproteins provided the energy band gap that makes such nonlinear-ity. Also, this system doesn’t exhibit any peculiar behavior and makes itdifficult to use in any resistive memory applications. Also, severalreports on azurin/Au showed symmetrical and sigmoidal I-V charac-teristics without any hysteretic nature (Yagati et al., 2012). However,azurin/CdSe-ZnS/Au hybrid showed a distinct electrical bipolar switch-ing behavior. This electrical bipolar behavior resulted from theconjugation resulted in an electronic phenomenon caused by thecharge transfer between the two nanomaterials comprising hybrid.

    As shown in Fig. 4d, the resistive switching with hysteretic behavioron the azurin/CdSe-ZnS hybrid was observed when trace and retracelinear voltage scans are applied from 0 to +3.0 V and –3.0 to 0 V,respectively. Initially, the I-V curve of the hybrid shows a lowconductivity state, and this state was defined as “OFF”. When thepotential reaches 2.0 V, an abrupt increase in conductivity occurs; thisis defined as the “ON” state. This state indicates a transition of thehybrid molecule from an initial OFF state to an ON state that isequivalent to the “write” process in a digital ReRAM device. Thus, theswitch-on voltage (VON) for azurin/CdSe-ZnS hybrid is 2.0 V. When anegative voltage is applied continuously, the hybrid molecule remainsin the ON state until 0.3 V. Then, it returns to the low conductivity state(OFF state). This reverse voltage state is equivalent to the “erase”process in the ReRAM device.

    3.4. Assessment of ReRAM function of azurin/CdSe-ZnS hybridsystem

    Several I-V curves were obtained on hybrids located at differentpositions to confirm the resistive memory property of system. Fig. 5ashows the I-V characteristics of azurin/CdSe-ZnS when a bias voltagewas applied from ± 3.0 V, respectively. As shown in the figure, thedevice starts switching to a conductive state (ON state) when theapplied voltage is 2 V, with a sharp increase in the current, and remainsin that state until the reverse voltage 0.9 V (OFF state) was applied. Thedevice shows electrical hysteresis behavior which is an essential featureof bistable memory devices. State “1” and state “0” correspond to therelatively high current (ON state) and the relatively low current states(OFF state), respectively. The bistable transition from ON and OFFstate is equivalent to the “write” and “erase” process in a digitalmemory device. This change in transition from low to high conductivityis because of the charge donor azurin transferring electrons due to theCu (I) and Cu (II) densities of states through tunneling to the lowerenergy core of the CdSe-ZnS core-shell nanoparticle. It is assumed thatfree electrons will tunnel through the conjugate by forming a doubletunnel junction, which has a distribution of many energy levelssandwiched between the two metal electrodes. Hysteresis was observedin reverse scanning from high to low bias, suggesting small amount ofcharge is stored in the CdSe-ZnS core. This is due to the charge transferfrom azurin to CdSe-ZnS particles under the applied electric field,consequently change in the conductivity of the hybrid system. Whencharge site in azurin is established, a sudden jump of currentaccompanying the charge tunneling through the nanoparticles isobserved. Hence, an electric field induced charge transfer mechanismtakes place between the azurin and CdSe-ZnS core resulting theobserved memory phenomena.

    To understand the carrier transport mechanism in ReRAM devicefor the two conducting states, the experimental I-V data was fittingwith theoretical model, Fig. 5. In the OFF state, the plot of ln(J) vs V1/2

    Fig. 3. (a) Energy filtered transmission electron microscopy (EF-TEM) image of CdSe-ZnS nanoparticles. (b) EF-TEM image of azurin-coupled QD molecules. (c) Energy dispersiveanalysis spectrometry (EDA) of CdSe-ZnS nanoparticles. (d) EDA of azurin-coupled QD molecules.

    A.K. Yagati et al. Biosensors and Bioelectronics 90 (2017) 23–30

    27

  • in the sweeping voltage ranging from 0 to 2 V before the electricaltransition can be fitted to a straight line with Eq. (1) (Lee et al., 2012),Fig. 5b.

    ⎢⎢⎢⎢

    ⎛⎝⎜

    ⎞⎠⎟

    ⎥⎥⎥⎥J AT

    q Φ

    kT= exp

    − −B qVπε ε2

    4 r 0

    (1)

    where J and V are the current density and voltage, respectively; A, T, k,ϕ, q, π, and εr and ε0 are the Richardson constant, temperature,Boltzmann constant, Schottky energy barrier, electron charge, ratio ofcircumference to diameter, and εr is the dynamic dielectric constant,and ε0 is the permittivity of free space, respectively. The observedlinearity characteristic suggests that the carrier transport mechanismin the OFF state is dominated by the thermionic emission, and theconduction mechanism is dominated by the charge injection fromelectrodes.

    For ON state conductive switching, the experimental data of theazurin/CdSe-ZnS hybrid device, shown in the plot of In(J/V) vs V1/2 inFig. 5c. Data is well fitted with a linear dependence although there aresome small deviations at low voltages. This result indicates that bulk-limited Poole-Frenkel emission is the dominant mechanism for theelectrical transport of carriers through this interface. The expression ofIP-F as a function of V corresponds to (Schulman et al., 2015)

    ⎡⎣⎢⎢

    ⎤⎦⎥⎥J qμN E

    q ϕ qE πε εkT

    = exp− ( − / )

    CT i 0

    (2)

    where μ is the electronic drift mobility, NC is the density of states in theconduction band, qϕT (=ΦT) is the trap energy level, and the other

    notations are the same as defined before. This process indicated thathybrid nanocomposite act as the charge traps to realize the electricalswitching and memory effect.

    The mechanism could be explained as charge can be efficientlytrapped in the molecule; i.e., a resonant state (redox state) of moleculeas a conducting channel, in which the highest occupied molecularorbital (HOMO) or lowest unoccupied molecular orbital (LUMO), willtrap charges injected from close Fermi levels of the contacts. Azurinactive site contains a copper (Cu) ion which is able to switch betweentwo stable states (Cu1+/Cu2+) and the arrangement of active site withligands gives ligand-to-metal charge transfer (LMCT) for the two redoxstates (i.e., the ligand-centered HOMO and metal centered LUMO).

    The molecular orbital energies of azurin can be estimated in thesolution state through cyclic voltammetry (CV). CV for azurin depictedredox peaks at 0.2 and 0.35 V vs Ag/AgCl (Yagati et al., 2013), which isequivalent to 0.15 and 0.30 V vs saturated calomel electrode (SCE)respectively. Also, from the STS curves the VON for azurin/CdSe-ZnSwas approximated as 2.0 V. (Hipps, 2006; Scudiero et al., 2002)disclosed a relation to convert the electrochemical potential referencedto SCE to a vacuum level as Vabs (eV)=4.7 eV+E° (SCE), where E° is theredox potential and 4.7 eV is approximated according to vacuum level,which is suitable expression for analyzing reduction process. However,for oxidation process the equation offered by (Schmidt et al., 1994;Scudiero et al., 2002) was utilized, and the ionization energiesVi=4.7 eV+(2.0) E

    ox (SCE)1/2 in which Eox (SCE)1/2 is the half-wave

    oxidation potential. Thus, the redox potentials of azurin can beconverted to solid-state potentials in STM using these two equations,and the energy levels ligand centered oxidation and metal centeredreduction are 5.3 and 4.85 respectively (Vi=4.7 eV +(1.0)×0.3=5.3 eVand Va=4.7 eV+0.15=4.85 eV). The actual solid-state ionization and

    Fig. 4. I-V characteristics obtained from scanning tunneling spectroscopy for (a) bare Au (b) CdSe-ZnS (c) lipo protein and (d) azurin/CdSe-ZnS on Au surface obtained at a tunnelingcurrent of 500 pA, bias of 100 mV. The red and black curves are the currents obtained during forward and reverse scan on the electrode surface in the potential window from ± 3 V.

    A.K. Yagati et al. Biosensors and Bioelectronics 90 (2017) 23–30

    28

  • electron affinity energies of HOMO and LUMO in azurin will deviateslightly from those in vacuum. Further, the HOMO/LUMO of CdSe-ZnS between electrodes and the work function of the electrodes wereadopted from the literature. The existence of the electrical bistabilitymight be attributed due to the existence of the internal electric fieldgenerated by trapped charge carriers in CdSe/ZnS core-shell QDs. TheOFF state can be recovered by the application of ~1.0 V. The proposedmodel can be compared with double barrier tunnel junction in whichthe electron tunnel from azurin to tip through CdSe-ZnS.

    The hybrid conjugate acts as a carrier blocking material, resulting inthe blockage of electrons due to the relatively large energy barrierbetween the work function of the Au electrode and the HOMO level ofthe hybrid layer. When Au electrode acts as –ve terminal, electron fromAu will pass towards Pt electrode via azurin/CdSe-ZnS hybrid mole-cule. Azurin is well-known for good conductor so electron can reach toprotein through thermionic injection, but some amount of energyrequired to overcome resistance of CdSe-ZnS semiconductor materialhence after VON (2.0 V) the electron from azurin can reach to LUMO ofCdSe-ZnS and then transfer towards the Pt electrode (Fig. 6a). When apositive applied voltage is applied to the electrode, after the injection ofelectrons from the Pt/Ir tip into the LUMO level occurs through thePoole-Frenkel tunneling process, the electrons existing at the LUMOlevel are transported among the hybrid molecules along the direction of

    the applied bias voltage through the tunneling process (Fig. 6a).To determine whether the azurin/CdSe-ZnS hybrid device pos-

    sessed sufficient stability for use as a resistive random access memory(ReRAM) device, its current response for write and erase cycles weretested for each operational voltage (Fig. 6b). The write and eraseoperations were performed at a voltage of +2.0 V and ‘erase’ pulse of1.0 V (both with a time width of 10−4 s), were used to turn the deviceON and OFF, respectively. The device was programmed for 50 cycleswith an ON/OFF ratio of around 103. However, with an increasingnumber of cycles, the device can be rationalized from the degradationof the single hybrid interface through joule heating during theoperation of the device. Thus, in terms of the performance the statisticsof VON and VOFF for the hybrid device was 2.0 and 0.5 respectively withan ON/OFF ratio 103 and possessed stable VON and VOFF over 50switching cycles. Besides using the biohybrid as a functional material,the resistive switching memory effect can be significantly tuned bycontrolling the composite system with different size of QDs and varioustypes of metalloproteins which possess different redox potentials andalso mixed protein systems for multibit and multilevel storage systems.The actual performance of the device is better than the other proteinbased memory (Meng et al., 2011) which possess diminished hysteresisbehavior with shorter retention times and virus/QD system (Portneyet al., 2008) has larger VON and VOFF switching voltages with shorterretention time. Nevertheless, there is also some challenging tasks suchas maintaining good memory performance on soft and curvilinearsurfaces and also fully integrating these hybrid devices in futurememory devices with full functionality is also necessary.

    4. Conclusion

    In conclusion, we present a strategy for the development of a

    Fig. 5. (a) I-V characteristics of the azurin/CdSe-ZnS hybrid on Au, exhibiting electricalbistability behavior where the current transition from the low (OFF state) to high (ONstate) and from low resistance state to high resistance showing the memory effect (b) plotof ln(J)-V1/2 fit for low conducting state which was attributed to thermionic emission (c)ln(J/V)-V1/2 fit for the high conductance state respectively. The magnitude of current andvoltage have been plotted to show the reverse bias section of the characteristics.

    Fig. 6. a) Energy band diagram of azurin/CdSe-ZnS hybrid junction in two different biasdirections. Bias was applied with respect to Pt tip. Curved arrows represent electrontransfer. All energy levels are drawn respect to the vacuum level (E=0); b) Performance ofReRAM memory composed of azurin/CdSe-ZnS hybrid. The currents during the appliedvoltage cycles show switching of the device from ON to OFF states depicting thebistability nature.

    A.K. Yagati et al. Biosensors and Bioelectronics 90 (2017) 23–30

    29

  • biohybrid material involving quantum dot and azurin. The bindingstrategy to form a hybrid is as follows; (i) the direct assembly ofrecombinant azurin on an Au surface without any linker by theincorporation of cysteine residues with an aim to introduce well-ordered and better functionality of the biomaterial, (ii) the incorpora-tion of a genetically engineered peptide sequence (NNPMHQN) whichis composed of specific amino acids that selectively bind to theinorganic surface, thus forming a hybrid. Further, the I-V measure-ments on hybrid structure exhibited electrical bistability for ReRAMfunctions. The ON/OFF ratio of the device was measured to be of threeorders of magnitude after repeated cycles. Also, the stability anddurability of the proposed system can be improved by incorporatingdifferent size nanoparticles. Furthermore, different types of recombi-nant proteins may influence the dipole interaction between the CdSe-ZnS and protein. Thus, the construction of ReRAM device composed ofazurin/CdSe-ZnS/Au hybrid particles are promising for developingnext-generation semiconductor devices.

    Acknowledgements

    This research was supported by the Leading Foreign ResearchInstitute Recruitment Program, through the National ResearchFoundation of Korea (NRF), funded by the Ministry of Science, ICTand Future Planning (MSIP) (2013K1A4A3055268) and by theNational Research Foundation of Korea (NRF) grant funded by theKorea government (MSIP) (2014R1A2A1A10051725) and by the BasicScience Research Program through the National Research Foundationof Korea (NRF) funded by the Ministry of Education(2016R1A6A1A03012845).

    Appendix A. Supporting information

    Supplementary data associated with this article can be found in theonline version at doi:10.1016/j.bios.2016.11.037.

    References

    Chen, Y.C., Yu, H.C., Huang, C.Y., Chung, W.L., Wu, S.L., Su, Y.K., 2015. Sci. Rep.-Uk, 5.

    Chung, Y.H., Lee, T., Park, H.J., Yun, W.S., Min, J., Choi, J.W., 2013. Nanotechnology24, 36.

    Dirks, A.J., van Berkel, S.S., Amatdjais-Groenen, H.I.V., Rutjes, F.P.J.T., Cornelissen,J.J.L.M., Nolte, R.J.M., 2009. Soft Matter 5 (8), 1692–1704.

    Fischbein, M.D., Drndic, M., 2005. Appl Phys. Lett. 86, 19.Gogurla, N., Mondal, S.P., Sinha, A.K., Katiyar, A.K., Banerjee, W., Kundu, S.C., Ray,

    S.K., 2013. Nanotechnology 24, 34.Hipps, K.W., 2006. Scanning tunneling spectroscopy (STS). In: Vij, R.D. (Ed.), Handbook

    of Applied Solid State Spectroscopy. Springer US, Boston, MA, 305–350.Hosseini, N.R., Lee, J.S., 2015. ACS Nano 9 (1), 419–426.Hummon, M.R., Stollenwerk, A.J., Narayanamurti, V., Anikeeva, P.O., Panzer, M.J.,

    Wood, V., Bulovic, V., 2010. Phys. Rev. B 81, 11.Katz, E., Willner, I., 2004. Angew. Chem. Int. Ed. 43 (45), 6042–6108.Lee, J.K., Jung, S., Park, J., Chung, S.W., Roh, J.S., Hong, S.J., Cho, I.H., Kwon, H.I.,

    Park, C.H., Park, B.G., Lee, J.H., 2012. Appl Phys. Lett. 101, 10.Lee, S.W., Mao, C.B., Flynn, C.E., Belcher, A.M., 2002. Science 296 (5569), 892–895.Lee, T., Kim, S.U., Min, J., Choi, J.W., 2010. Adv. Mater. 22, 510–514.Lee, T., Yagati, A.K., Min, J., Choi, J.W., 2014. Adv. Funct. Mater. 24 (12), 1781–1789.Meng, F.B., Jiang, L., Zheng, K.H., Goh, C.F., Lim, S., Hng, H.H., Ma, J., Boey, F., Chen,

    X.D., 2011. Small 7 (21), 3016–3020.Portney, N.G., Martinez-Morales, A.A., Ozkan, M., 2008. ACS Nano 2 (2), 191–196.Reed, M.A., 1993. Sci. Am. 268 (1), 118–123.Reikofski, J., Tao, B.Y., 1992. Biotechnol. Adv. 10 (4), 535–547.Sarikaya, M., Tamerler, C., Jen, A.K.Y., Schulten, K., Baneyx, F., 2003. Nat. Mater. 2 (9),

    577–585.Schmidt, A., Armstrong, N.R., Goeltner, C., Muellen, K., 1994. J. Phys. Chem.-Us 98

    (45), 11780–11785.Schulman, A., Lanosa, L.F., Acha, C., 2015. J. Appl Phys. 118, 4.Scudiero, L., Barlow, D.E., Hipps, K.W., 2002. J. Phys. Chem. B 106 (5), 996–1003.Tseng, R.J., Tsai, C.L., Ma, L.P., Ouyang, J.Y., 2006. Nat. Nanotechnol. 1 (1), 72–77.Uenuma, M., Kawano, K., Zheng, B., Okamoto, N., Horita, M., Yoshii, S., Yamashita, I.,

    Uraoka, Y., 2011. Nanotechnology 22, 21.Wang, H., Du, Y.M., Li, Y.T., Zhu, B.W., Leow, W.R., Li, Y.G., Pan, J.S., Wu, T., Chen,

    X.D., 2015a. Adv. Funct. Mater. 25 (25), 3825–3831.Wang, H., Meng, F.B., Zhu, B.W., Leow, W.R., Liu, Y.Q., Chen, X.D., 2015b. Adv. Mater.

    27 (46), 7670–7676.Wang, H., Zhu, B.W., Ma, X.H., Hao, Y., Chen, X.D., 2016. Small 12 (20), 2715–2719.Wilson, W.L., Szajowski, P.F., Brus, L.E., 1993. Science 262 (5137), 1242–1244.Wondrak, W., 1999. Microelectron. Reliab. 39 (6–7), 1113–1120.Yagati, A.K., Kim, S.U., Min, J.H., Choi, J.W., 2009. Biosens. Bioelectron. 24 (5),

    1503–1507.Yagati, A.K., Lee, T., Min, J., Choi, J.W., 2012. Bioelectrochemistry 83, 8–14.Yagati, A.K., Lee, T., Min, J., Choi, J.W., 2013. Biosens. Bioelectron. 40 (1), 283–290.You, C.Y., 2014. J. Appl Phys. 115, 4.

    A.K. Yagati et al. Biosensors and Bioelectronics 90 (2017) 23–30

    30

    http://dx.doi.org/10.1016/j.bios.2016.11.037http://refhub.elsevier.com/S0956-16)31179-sbref1http://refhub.elsevier.com/S0956-16)31179-sbref2http://refhub.elsevier.com/S0956-16)31179-sbref2http://refhub.elsevier.com/S0956-16)31179-sbref3http://refhub.elsevier.com/S0956-16)31179-sbref3http://refhub.elsevier.com/S0956-16)31179-sbref4http://refhub.elsevier.com/S0956-16)31179-sbref5http://refhub.elsevier.com/S0956-16)31179-sbref5http://refhub.elsevier.com/S0956-16)31179-sbref6http://refhub.elsevier.com/S0956-16)31179-sbref6http://refhub.elsevier.com/S0956-16)31179-sbref7http://refhub.elsevier.com/S0956-16)31179-sbref8http://refhub.elsevier.com/S0956-16)31179-sbref8http://refhub.elsevier.com/S0956-16)31179-sbref9http://refhub.elsevier.com/S0956-16)31179-sbref10http://refhub.elsevier.com/S0956-16)31179-sbref10http://refhub.elsevier.com/S0956-16)31179-sbref11http://refhub.elsevier.com/S0956-16)31179-sbref12http://refhub.elsevier.com/S0956-16)31179-sbref13http://refhub.elsevier.com/S0956-16)31179-sbref14http://refhub.elsevier.com/S0956-16)31179-sbref14http://refhub.elsevier.com/S0956-16)31179-sbref15http://refhub.elsevier.com/S0956-16)31179-sbref16http://refhub.elsevier.com/S0956-16)31179-sbref17http://refhub.elsevier.com/S0956-16)31179-sbref18http://refhub.elsevier.com/S0956-16)31179-sbref18http://refhub.elsevier.com/S0956-16)31179-sbref19http://refhub.elsevier.com/S0956-16)31179-sbref19http://refhub.elsevier.com/S0956-16)31179-sbref20http://refhub.elsevier.com/S0956-16)31179-sbref21http://refhub.elsevier.com/S0956-16)31179-sbref22http://refhub.elsevier.com/S0956-16)31179-sbref23http://refhub.elsevier.com/S0956-16)31179-sbref23http://refhub.elsevier.com/S0956-16)31179-sbref24http://refhub.elsevier.com/S0956-16)31179-sbref24http://refhub.elsevier.com/S0956-16)31179-sbref25http://refhub.elsevier.com/S0956-16)31179-sbref25http://refhub.elsevier.com/S0956-16)31179-sbref26http://refhub.elsevier.com/S0956-16)31179-sbref27http://refhub.elsevier.com/S0956-16)31179-sbref28http://refhub.elsevier.com/S0956-16)31179-sbref29http://refhub.elsevier.com/S0956-16)31179-sbref29http://refhub.elsevier.com/S0956-16)31179-sbref30http://refhub.elsevier.com/S0956-16)31179-sbref31http://refhub.elsevier.com/S0956-16)31179-sbref32

    Recombinant azurin-CdSe/ZnS hybrid structures for nanoscale resistive random access memory deviceIntroductionExperimental detailsMaterials and reagentsConstruction of recombinant azurin geneExpression and purification of recombinant azurinDevice fabricationElectrical and optical characterizations

    Results and discussionProduction of recombinant azurinFormation of azurin/CdSe-ZnS hybrid moleculesElectrical characteristics of azurin/CdSe-ZnS hybrid systemAssessment of ReRAM function of azurin/CdSe-ZnS hybrid system

    ConclusionAcknowledgementsSupporting informationReferences