quick dft tour of electron energy loss spectrum (eels)

12
By Shruba Gangopadhyay Email: [email protected]

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Page 1: Quick DFT tour of Electron Energy Loss  Spectrum (EELS)

By

Shruba Gangopadhyay

Email shrubagmailcom

Basics of EELS Material exposed to a beam of electrons with a

known narrow range of kinetic energies

Electrons will undergo inelastic scattering which

means that they lose energy

Inelastic interactions include

phonon excitations

inter and intra band transitions

plasmon excitations

inner shell ionizations

2

Atomic amp Electronic Structure

STEM + EELS makes

essential connection

between physical amp

electronic structure

both at atomic

resolution

Electron Energy

Loss Spectrometer

Annular Dark Field

(ADF) detector

yx

Atomic Diameter

Electron Probe

Incre

asi

ng

energ

y loss

We can have an estimate of beam energy ranges from httppeopleccmrcornelledu~davidmWEELSindexhtml

httppc-webcemesfreelsdbindexphppage=searchphp

EELS hellip(Theory)

THEORY OF EELS The EELS (and XAS) spectral shape is given by the Fermi golden rule

The core electron is excited to an empty state where at the edge the lowest empty

state (allowed by the selection rules) is reached

As such one essentially probes the empty density of states in the presence of the

core hole Calculations to obtain a quantitative picture of the empty states can be

performed with DFT based codes

A double differential scattering cross-section is calculated by

summing over all possible transitions between initial and final

states each described by a Fermirsquos golden rule

4

5

When we need core hole approximation

When you have good energy resolution (lt1 eV)

When screening is poor

Metals (small) semiconductors(medium) ionic (huge)

The effect is larger on anions than cations

More noticeable in nanoparticles and clusters than bulk

Batsonrsquos Rule core hole effects are more pronounced when The excited electron is confined near the core hole (It shouldnrsquot work but it

does)

Atoms surrounded by strong scatterers (often nodeless valence wavefunctions1s 2p 3dhellip) (eg Si in SiOx Al in NiAl TiB2 out of plane)

6

In Wien 2k we can only simulate electron loss near-edge structure (ELNES) rdquo features in the spectrum with energy loss E = Ec to Ec + 50 eV (by definition) It contains

information on local density of empty states oxidation state

How to simulate Core Hole in Wien2kNo core hole (= ground state sudden approximation)

1048708 Z+1 approximation (eg replace C by N)

1048708 Remove 1 core electron add 1 electron to conduction band

1048708 Remove 1 core electron add 1 electron as uniform background

charge

More localized the core hole the bigger the error7

How to simulate EELS in in Wien2k

(TELNES)Construct a supercell and perform an SCF

(need good amount of K points)

If excited states required prepare another input by reseting energy range and recalculate valence bands

Compute Valence electron densities from eigenvectors

Calculate eigenvalues and corresponding partial charges

Prepare input for EELS

use of beam energy and other angular parameters

This results The differential cross section is either a function of energy (ELNES ( the output of

Wien2k) integrated over impulse transfer) or a function of impulse transfer (ELNES integrated

over energy loss E) which shows the angular behavior of scattering8

Available softwares and pros and cons

Wien2k Quantum ESPRESSO

(External suite SaX)

Telnes (code) SaX external code

Double differential

scattering cross

section on a

grid of energy loss

Macroscopic

dielectric tensor

within the Random

Phase Approximation

with or without

excitonic effects as a

function of energy

Computationally

less expensive

Very expensive

Applied to various

systems

Not too many

published papers

Band structure codes

PARATEC (Cabaret et al2007Gaudryetal2005)

PWSCF(Cabaret et al2010Juhin et al2010)

CASTEP(Gao et al2008)

WIEN2K(Schwarz et al 2002)

Real space multiple scattering codes

FDMNES (Joly 2003)

FEFF(Rehr andAlbers2000)

Molecular DFT codes

STOBE(Kolczewski andHermann2005)

ORCA (George etal2008)

9

Literature Review

As per my understanding the advantages of Wien2k is

Can handle large system

No need to worry about core hole pseudopotentials

Applied to TM and Lanthanide including Magnetic transitions

Parallel implementation

Option of using relativistic correction

User friendly interface for generating input files

Extremely active user forum

10

Wien2k VO2 (crystal) LiMn2O4 TiO2 ZrO2 Nb1-xMgxB2 LixTiP4 (x=2-

11) LiK edge in Li Li2O and LiMn2O4 Si layers

ferroelectric transition in BaTiO3

helliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphellip TiC TiN

Quantum

ESPRESSO

Boron Nitrogen doped graphene different phases of Al2O3

VASP No direct implementation (derived from DOS) C60

Simulated EELS for K edge EELS of

Carbon in TiC using (2x2x2) supercell

1000 k points

100 k points

I did not use any core hole approximation in

this calculation11

Sources

Wien2k manual Tutorial from 2007 PSU

workshop

SaX manual

Presentation from David Mullers summer

school pdf

Calculations are performed in NERSC using

Wien2k v101 and Telnes2

12

Page 2: Quick DFT tour of Electron Energy Loss  Spectrum (EELS)

Basics of EELS Material exposed to a beam of electrons with a

known narrow range of kinetic energies

Electrons will undergo inelastic scattering which

means that they lose energy

Inelastic interactions include

phonon excitations

inter and intra band transitions

plasmon excitations

inner shell ionizations

2

Atomic amp Electronic Structure

STEM + EELS makes

essential connection

between physical amp

electronic structure

both at atomic

resolution

Electron Energy

Loss Spectrometer

Annular Dark Field

(ADF) detector

yx

Atomic Diameter

Electron Probe

Incre

asi

ng

energ

y loss

We can have an estimate of beam energy ranges from httppeopleccmrcornelledu~davidmWEELSindexhtml

httppc-webcemesfreelsdbindexphppage=searchphp

EELS hellip(Theory)

THEORY OF EELS The EELS (and XAS) spectral shape is given by the Fermi golden rule

The core electron is excited to an empty state where at the edge the lowest empty

state (allowed by the selection rules) is reached

As such one essentially probes the empty density of states in the presence of the

core hole Calculations to obtain a quantitative picture of the empty states can be

performed with DFT based codes

A double differential scattering cross-section is calculated by

summing over all possible transitions between initial and final

states each described by a Fermirsquos golden rule

4

5

When we need core hole approximation

When you have good energy resolution (lt1 eV)

When screening is poor

Metals (small) semiconductors(medium) ionic (huge)

The effect is larger on anions than cations

More noticeable in nanoparticles and clusters than bulk

Batsonrsquos Rule core hole effects are more pronounced when The excited electron is confined near the core hole (It shouldnrsquot work but it

does)

Atoms surrounded by strong scatterers (often nodeless valence wavefunctions1s 2p 3dhellip) (eg Si in SiOx Al in NiAl TiB2 out of plane)

6

In Wien 2k we can only simulate electron loss near-edge structure (ELNES) rdquo features in the spectrum with energy loss E = Ec to Ec + 50 eV (by definition) It contains

information on local density of empty states oxidation state

How to simulate Core Hole in Wien2kNo core hole (= ground state sudden approximation)

1048708 Z+1 approximation (eg replace C by N)

1048708 Remove 1 core electron add 1 electron to conduction band

1048708 Remove 1 core electron add 1 electron as uniform background

charge

More localized the core hole the bigger the error7

How to simulate EELS in in Wien2k

(TELNES)Construct a supercell and perform an SCF

(need good amount of K points)

If excited states required prepare another input by reseting energy range and recalculate valence bands

Compute Valence electron densities from eigenvectors

Calculate eigenvalues and corresponding partial charges

Prepare input for EELS

use of beam energy and other angular parameters

This results The differential cross section is either a function of energy (ELNES ( the output of

Wien2k) integrated over impulse transfer) or a function of impulse transfer (ELNES integrated

over energy loss E) which shows the angular behavior of scattering8

Available softwares and pros and cons

Wien2k Quantum ESPRESSO

(External suite SaX)

Telnes (code) SaX external code

Double differential

scattering cross

section on a

grid of energy loss

Macroscopic

dielectric tensor

within the Random

Phase Approximation

with or without

excitonic effects as a

function of energy

Computationally

less expensive

Very expensive

Applied to various

systems

Not too many

published papers

Band structure codes

PARATEC (Cabaret et al2007Gaudryetal2005)

PWSCF(Cabaret et al2010Juhin et al2010)

CASTEP(Gao et al2008)

WIEN2K(Schwarz et al 2002)

Real space multiple scattering codes

FDMNES (Joly 2003)

FEFF(Rehr andAlbers2000)

Molecular DFT codes

STOBE(Kolczewski andHermann2005)

ORCA (George etal2008)

9

Literature Review

As per my understanding the advantages of Wien2k is

Can handle large system

No need to worry about core hole pseudopotentials

Applied to TM and Lanthanide including Magnetic transitions

Parallel implementation

Option of using relativistic correction

User friendly interface for generating input files

Extremely active user forum

10

Wien2k VO2 (crystal) LiMn2O4 TiO2 ZrO2 Nb1-xMgxB2 LixTiP4 (x=2-

11) LiK edge in Li Li2O and LiMn2O4 Si layers

ferroelectric transition in BaTiO3

helliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphellip TiC TiN

Quantum

ESPRESSO

Boron Nitrogen doped graphene different phases of Al2O3

VASP No direct implementation (derived from DOS) C60

Simulated EELS for K edge EELS of

Carbon in TiC using (2x2x2) supercell

1000 k points

100 k points

I did not use any core hole approximation in

this calculation11

Sources

Wien2k manual Tutorial from 2007 PSU

workshop

SaX manual

Presentation from David Mullers summer

school pdf

Calculations are performed in NERSC using

Wien2k v101 and Telnes2

12

Page 3: Quick DFT tour of Electron Energy Loss  Spectrum (EELS)

Atomic amp Electronic Structure

STEM + EELS makes

essential connection

between physical amp

electronic structure

both at atomic

resolution

Electron Energy

Loss Spectrometer

Annular Dark Field

(ADF) detector

yx

Atomic Diameter

Electron Probe

Incre

asi

ng

energ

y loss

We can have an estimate of beam energy ranges from httppeopleccmrcornelledu~davidmWEELSindexhtml

httppc-webcemesfreelsdbindexphppage=searchphp

EELS hellip(Theory)

THEORY OF EELS The EELS (and XAS) spectral shape is given by the Fermi golden rule

The core electron is excited to an empty state where at the edge the lowest empty

state (allowed by the selection rules) is reached

As such one essentially probes the empty density of states in the presence of the

core hole Calculations to obtain a quantitative picture of the empty states can be

performed with DFT based codes

A double differential scattering cross-section is calculated by

summing over all possible transitions between initial and final

states each described by a Fermirsquos golden rule

4

5

When we need core hole approximation

When you have good energy resolution (lt1 eV)

When screening is poor

Metals (small) semiconductors(medium) ionic (huge)

The effect is larger on anions than cations

More noticeable in nanoparticles and clusters than bulk

Batsonrsquos Rule core hole effects are more pronounced when The excited electron is confined near the core hole (It shouldnrsquot work but it

does)

Atoms surrounded by strong scatterers (often nodeless valence wavefunctions1s 2p 3dhellip) (eg Si in SiOx Al in NiAl TiB2 out of plane)

6

In Wien 2k we can only simulate electron loss near-edge structure (ELNES) rdquo features in the spectrum with energy loss E = Ec to Ec + 50 eV (by definition) It contains

information on local density of empty states oxidation state

How to simulate Core Hole in Wien2kNo core hole (= ground state sudden approximation)

1048708 Z+1 approximation (eg replace C by N)

1048708 Remove 1 core electron add 1 electron to conduction band

1048708 Remove 1 core electron add 1 electron as uniform background

charge

More localized the core hole the bigger the error7

How to simulate EELS in in Wien2k

(TELNES)Construct a supercell and perform an SCF

(need good amount of K points)

If excited states required prepare another input by reseting energy range and recalculate valence bands

Compute Valence electron densities from eigenvectors

Calculate eigenvalues and corresponding partial charges

Prepare input for EELS

use of beam energy and other angular parameters

This results The differential cross section is either a function of energy (ELNES ( the output of

Wien2k) integrated over impulse transfer) or a function of impulse transfer (ELNES integrated

over energy loss E) which shows the angular behavior of scattering8

Available softwares and pros and cons

Wien2k Quantum ESPRESSO

(External suite SaX)

Telnes (code) SaX external code

Double differential

scattering cross

section on a

grid of energy loss

Macroscopic

dielectric tensor

within the Random

Phase Approximation

with or without

excitonic effects as a

function of energy

Computationally

less expensive

Very expensive

Applied to various

systems

Not too many

published papers

Band structure codes

PARATEC (Cabaret et al2007Gaudryetal2005)

PWSCF(Cabaret et al2010Juhin et al2010)

CASTEP(Gao et al2008)

WIEN2K(Schwarz et al 2002)

Real space multiple scattering codes

FDMNES (Joly 2003)

FEFF(Rehr andAlbers2000)

Molecular DFT codes

STOBE(Kolczewski andHermann2005)

ORCA (George etal2008)

9

Literature Review

As per my understanding the advantages of Wien2k is

Can handle large system

No need to worry about core hole pseudopotentials

Applied to TM and Lanthanide including Magnetic transitions

Parallel implementation

Option of using relativistic correction

User friendly interface for generating input files

Extremely active user forum

10

Wien2k VO2 (crystal) LiMn2O4 TiO2 ZrO2 Nb1-xMgxB2 LixTiP4 (x=2-

11) LiK edge in Li Li2O and LiMn2O4 Si layers

ferroelectric transition in BaTiO3

helliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphellip TiC TiN

Quantum

ESPRESSO

Boron Nitrogen doped graphene different phases of Al2O3

VASP No direct implementation (derived from DOS) C60

Simulated EELS for K edge EELS of

Carbon in TiC using (2x2x2) supercell

1000 k points

100 k points

I did not use any core hole approximation in

this calculation11

Sources

Wien2k manual Tutorial from 2007 PSU

workshop

SaX manual

Presentation from David Mullers summer

school pdf

Calculations are performed in NERSC using

Wien2k v101 and Telnes2

12

Page 4: Quick DFT tour of Electron Energy Loss  Spectrum (EELS)

EELS hellip(Theory)

THEORY OF EELS The EELS (and XAS) spectral shape is given by the Fermi golden rule

The core electron is excited to an empty state where at the edge the lowest empty

state (allowed by the selection rules) is reached

As such one essentially probes the empty density of states in the presence of the

core hole Calculations to obtain a quantitative picture of the empty states can be

performed with DFT based codes

A double differential scattering cross-section is calculated by

summing over all possible transitions between initial and final

states each described by a Fermirsquos golden rule

4

5

When we need core hole approximation

When you have good energy resolution (lt1 eV)

When screening is poor

Metals (small) semiconductors(medium) ionic (huge)

The effect is larger on anions than cations

More noticeable in nanoparticles and clusters than bulk

Batsonrsquos Rule core hole effects are more pronounced when The excited electron is confined near the core hole (It shouldnrsquot work but it

does)

Atoms surrounded by strong scatterers (often nodeless valence wavefunctions1s 2p 3dhellip) (eg Si in SiOx Al in NiAl TiB2 out of plane)

6

In Wien 2k we can only simulate electron loss near-edge structure (ELNES) rdquo features in the spectrum with energy loss E = Ec to Ec + 50 eV (by definition) It contains

information on local density of empty states oxidation state

How to simulate Core Hole in Wien2kNo core hole (= ground state sudden approximation)

1048708 Z+1 approximation (eg replace C by N)

1048708 Remove 1 core electron add 1 electron to conduction band

1048708 Remove 1 core electron add 1 electron as uniform background

charge

More localized the core hole the bigger the error7

How to simulate EELS in in Wien2k

(TELNES)Construct a supercell and perform an SCF

(need good amount of K points)

If excited states required prepare another input by reseting energy range and recalculate valence bands

Compute Valence electron densities from eigenvectors

Calculate eigenvalues and corresponding partial charges

Prepare input for EELS

use of beam energy and other angular parameters

This results The differential cross section is either a function of energy (ELNES ( the output of

Wien2k) integrated over impulse transfer) or a function of impulse transfer (ELNES integrated

over energy loss E) which shows the angular behavior of scattering8

Available softwares and pros and cons

Wien2k Quantum ESPRESSO

(External suite SaX)

Telnes (code) SaX external code

Double differential

scattering cross

section on a

grid of energy loss

Macroscopic

dielectric tensor

within the Random

Phase Approximation

with or without

excitonic effects as a

function of energy

Computationally

less expensive

Very expensive

Applied to various

systems

Not too many

published papers

Band structure codes

PARATEC (Cabaret et al2007Gaudryetal2005)

PWSCF(Cabaret et al2010Juhin et al2010)

CASTEP(Gao et al2008)

WIEN2K(Schwarz et al 2002)

Real space multiple scattering codes

FDMNES (Joly 2003)

FEFF(Rehr andAlbers2000)

Molecular DFT codes

STOBE(Kolczewski andHermann2005)

ORCA (George etal2008)

9

Literature Review

As per my understanding the advantages of Wien2k is

Can handle large system

No need to worry about core hole pseudopotentials

Applied to TM and Lanthanide including Magnetic transitions

Parallel implementation

Option of using relativistic correction

User friendly interface for generating input files

Extremely active user forum

10

Wien2k VO2 (crystal) LiMn2O4 TiO2 ZrO2 Nb1-xMgxB2 LixTiP4 (x=2-

11) LiK edge in Li Li2O and LiMn2O4 Si layers

ferroelectric transition in BaTiO3

helliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphellip TiC TiN

Quantum

ESPRESSO

Boron Nitrogen doped graphene different phases of Al2O3

VASP No direct implementation (derived from DOS) C60

Simulated EELS for K edge EELS of

Carbon in TiC using (2x2x2) supercell

1000 k points

100 k points

I did not use any core hole approximation in

this calculation11

Sources

Wien2k manual Tutorial from 2007 PSU

workshop

SaX manual

Presentation from David Mullers summer

school pdf

Calculations are performed in NERSC using

Wien2k v101 and Telnes2

12

Page 5: Quick DFT tour of Electron Energy Loss  Spectrum (EELS)

5

When we need core hole approximation

When you have good energy resolution (lt1 eV)

When screening is poor

Metals (small) semiconductors(medium) ionic (huge)

The effect is larger on anions than cations

More noticeable in nanoparticles and clusters than bulk

Batsonrsquos Rule core hole effects are more pronounced when The excited electron is confined near the core hole (It shouldnrsquot work but it

does)

Atoms surrounded by strong scatterers (often nodeless valence wavefunctions1s 2p 3dhellip) (eg Si in SiOx Al in NiAl TiB2 out of plane)

6

In Wien 2k we can only simulate electron loss near-edge structure (ELNES) rdquo features in the spectrum with energy loss E = Ec to Ec + 50 eV (by definition) It contains

information on local density of empty states oxidation state

How to simulate Core Hole in Wien2kNo core hole (= ground state sudden approximation)

1048708 Z+1 approximation (eg replace C by N)

1048708 Remove 1 core electron add 1 electron to conduction band

1048708 Remove 1 core electron add 1 electron as uniform background

charge

More localized the core hole the bigger the error7

How to simulate EELS in in Wien2k

(TELNES)Construct a supercell and perform an SCF

(need good amount of K points)

If excited states required prepare another input by reseting energy range and recalculate valence bands

Compute Valence electron densities from eigenvectors

Calculate eigenvalues and corresponding partial charges

Prepare input for EELS

use of beam energy and other angular parameters

This results The differential cross section is either a function of energy (ELNES ( the output of

Wien2k) integrated over impulse transfer) or a function of impulse transfer (ELNES integrated

over energy loss E) which shows the angular behavior of scattering8

Available softwares and pros and cons

Wien2k Quantum ESPRESSO

(External suite SaX)

Telnes (code) SaX external code

Double differential

scattering cross

section on a

grid of energy loss

Macroscopic

dielectric tensor

within the Random

Phase Approximation

with or without

excitonic effects as a

function of energy

Computationally

less expensive

Very expensive

Applied to various

systems

Not too many

published papers

Band structure codes

PARATEC (Cabaret et al2007Gaudryetal2005)

PWSCF(Cabaret et al2010Juhin et al2010)

CASTEP(Gao et al2008)

WIEN2K(Schwarz et al 2002)

Real space multiple scattering codes

FDMNES (Joly 2003)

FEFF(Rehr andAlbers2000)

Molecular DFT codes

STOBE(Kolczewski andHermann2005)

ORCA (George etal2008)

9

Literature Review

As per my understanding the advantages of Wien2k is

Can handle large system

No need to worry about core hole pseudopotentials

Applied to TM and Lanthanide including Magnetic transitions

Parallel implementation

Option of using relativistic correction

User friendly interface for generating input files

Extremely active user forum

10

Wien2k VO2 (crystal) LiMn2O4 TiO2 ZrO2 Nb1-xMgxB2 LixTiP4 (x=2-

11) LiK edge in Li Li2O and LiMn2O4 Si layers

ferroelectric transition in BaTiO3

helliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphellip TiC TiN

Quantum

ESPRESSO

Boron Nitrogen doped graphene different phases of Al2O3

VASP No direct implementation (derived from DOS) C60

Simulated EELS for K edge EELS of

Carbon in TiC using (2x2x2) supercell

1000 k points

100 k points

I did not use any core hole approximation in

this calculation11

Sources

Wien2k manual Tutorial from 2007 PSU

workshop

SaX manual

Presentation from David Mullers summer

school pdf

Calculations are performed in NERSC using

Wien2k v101 and Telnes2

12

Page 6: Quick DFT tour of Electron Energy Loss  Spectrum (EELS)

When we need core hole approximation

When you have good energy resolution (lt1 eV)

When screening is poor

Metals (small) semiconductors(medium) ionic (huge)

The effect is larger on anions than cations

More noticeable in nanoparticles and clusters than bulk

Batsonrsquos Rule core hole effects are more pronounced when The excited electron is confined near the core hole (It shouldnrsquot work but it

does)

Atoms surrounded by strong scatterers (often nodeless valence wavefunctions1s 2p 3dhellip) (eg Si in SiOx Al in NiAl TiB2 out of plane)

6

In Wien 2k we can only simulate electron loss near-edge structure (ELNES) rdquo features in the spectrum with energy loss E = Ec to Ec + 50 eV (by definition) It contains

information on local density of empty states oxidation state

How to simulate Core Hole in Wien2kNo core hole (= ground state sudden approximation)

1048708 Z+1 approximation (eg replace C by N)

1048708 Remove 1 core electron add 1 electron to conduction band

1048708 Remove 1 core electron add 1 electron as uniform background

charge

More localized the core hole the bigger the error7

How to simulate EELS in in Wien2k

(TELNES)Construct a supercell and perform an SCF

(need good amount of K points)

If excited states required prepare another input by reseting energy range and recalculate valence bands

Compute Valence electron densities from eigenvectors

Calculate eigenvalues and corresponding partial charges

Prepare input for EELS

use of beam energy and other angular parameters

This results The differential cross section is either a function of energy (ELNES ( the output of

Wien2k) integrated over impulse transfer) or a function of impulse transfer (ELNES integrated

over energy loss E) which shows the angular behavior of scattering8

Available softwares and pros and cons

Wien2k Quantum ESPRESSO

(External suite SaX)

Telnes (code) SaX external code

Double differential

scattering cross

section on a

grid of energy loss

Macroscopic

dielectric tensor

within the Random

Phase Approximation

with or without

excitonic effects as a

function of energy

Computationally

less expensive

Very expensive

Applied to various

systems

Not too many

published papers

Band structure codes

PARATEC (Cabaret et al2007Gaudryetal2005)

PWSCF(Cabaret et al2010Juhin et al2010)

CASTEP(Gao et al2008)

WIEN2K(Schwarz et al 2002)

Real space multiple scattering codes

FDMNES (Joly 2003)

FEFF(Rehr andAlbers2000)

Molecular DFT codes

STOBE(Kolczewski andHermann2005)

ORCA (George etal2008)

9

Literature Review

As per my understanding the advantages of Wien2k is

Can handle large system

No need to worry about core hole pseudopotentials

Applied to TM and Lanthanide including Magnetic transitions

Parallel implementation

Option of using relativistic correction

User friendly interface for generating input files

Extremely active user forum

10

Wien2k VO2 (crystal) LiMn2O4 TiO2 ZrO2 Nb1-xMgxB2 LixTiP4 (x=2-

11) LiK edge in Li Li2O and LiMn2O4 Si layers

ferroelectric transition in BaTiO3

helliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphellip TiC TiN

Quantum

ESPRESSO

Boron Nitrogen doped graphene different phases of Al2O3

VASP No direct implementation (derived from DOS) C60

Simulated EELS for K edge EELS of

Carbon in TiC using (2x2x2) supercell

1000 k points

100 k points

I did not use any core hole approximation in

this calculation11

Sources

Wien2k manual Tutorial from 2007 PSU

workshop

SaX manual

Presentation from David Mullers summer

school pdf

Calculations are performed in NERSC using

Wien2k v101 and Telnes2

12

Page 7: Quick DFT tour of Electron Energy Loss  Spectrum (EELS)

How to simulate Core Hole in Wien2kNo core hole (= ground state sudden approximation)

1048708 Z+1 approximation (eg replace C by N)

1048708 Remove 1 core electron add 1 electron to conduction band

1048708 Remove 1 core electron add 1 electron as uniform background

charge

More localized the core hole the bigger the error7

How to simulate EELS in in Wien2k

(TELNES)Construct a supercell and perform an SCF

(need good amount of K points)

If excited states required prepare another input by reseting energy range and recalculate valence bands

Compute Valence electron densities from eigenvectors

Calculate eigenvalues and corresponding partial charges

Prepare input for EELS

use of beam energy and other angular parameters

This results The differential cross section is either a function of energy (ELNES ( the output of

Wien2k) integrated over impulse transfer) or a function of impulse transfer (ELNES integrated

over energy loss E) which shows the angular behavior of scattering8

Available softwares and pros and cons

Wien2k Quantum ESPRESSO

(External suite SaX)

Telnes (code) SaX external code

Double differential

scattering cross

section on a

grid of energy loss

Macroscopic

dielectric tensor

within the Random

Phase Approximation

with or without

excitonic effects as a

function of energy

Computationally

less expensive

Very expensive

Applied to various

systems

Not too many

published papers

Band structure codes

PARATEC (Cabaret et al2007Gaudryetal2005)

PWSCF(Cabaret et al2010Juhin et al2010)

CASTEP(Gao et al2008)

WIEN2K(Schwarz et al 2002)

Real space multiple scattering codes

FDMNES (Joly 2003)

FEFF(Rehr andAlbers2000)

Molecular DFT codes

STOBE(Kolczewski andHermann2005)

ORCA (George etal2008)

9

Literature Review

As per my understanding the advantages of Wien2k is

Can handle large system

No need to worry about core hole pseudopotentials

Applied to TM and Lanthanide including Magnetic transitions

Parallel implementation

Option of using relativistic correction

User friendly interface for generating input files

Extremely active user forum

10

Wien2k VO2 (crystal) LiMn2O4 TiO2 ZrO2 Nb1-xMgxB2 LixTiP4 (x=2-

11) LiK edge in Li Li2O and LiMn2O4 Si layers

ferroelectric transition in BaTiO3

helliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphellip TiC TiN

Quantum

ESPRESSO

Boron Nitrogen doped graphene different phases of Al2O3

VASP No direct implementation (derived from DOS) C60

Simulated EELS for K edge EELS of

Carbon in TiC using (2x2x2) supercell

1000 k points

100 k points

I did not use any core hole approximation in

this calculation11

Sources

Wien2k manual Tutorial from 2007 PSU

workshop

SaX manual

Presentation from David Mullers summer

school pdf

Calculations are performed in NERSC using

Wien2k v101 and Telnes2

12

Page 8: Quick DFT tour of Electron Energy Loss  Spectrum (EELS)

How to simulate EELS in in Wien2k

(TELNES)Construct a supercell and perform an SCF

(need good amount of K points)

If excited states required prepare another input by reseting energy range and recalculate valence bands

Compute Valence electron densities from eigenvectors

Calculate eigenvalues and corresponding partial charges

Prepare input for EELS

use of beam energy and other angular parameters

This results The differential cross section is either a function of energy (ELNES ( the output of

Wien2k) integrated over impulse transfer) or a function of impulse transfer (ELNES integrated

over energy loss E) which shows the angular behavior of scattering8

Available softwares and pros and cons

Wien2k Quantum ESPRESSO

(External suite SaX)

Telnes (code) SaX external code

Double differential

scattering cross

section on a

grid of energy loss

Macroscopic

dielectric tensor

within the Random

Phase Approximation

with or without

excitonic effects as a

function of energy

Computationally

less expensive

Very expensive

Applied to various

systems

Not too many

published papers

Band structure codes

PARATEC (Cabaret et al2007Gaudryetal2005)

PWSCF(Cabaret et al2010Juhin et al2010)

CASTEP(Gao et al2008)

WIEN2K(Schwarz et al 2002)

Real space multiple scattering codes

FDMNES (Joly 2003)

FEFF(Rehr andAlbers2000)

Molecular DFT codes

STOBE(Kolczewski andHermann2005)

ORCA (George etal2008)

9

Literature Review

As per my understanding the advantages of Wien2k is

Can handle large system

No need to worry about core hole pseudopotentials

Applied to TM and Lanthanide including Magnetic transitions

Parallel implementation

Option of using relativistic correction

User friendly interface for generating input files

Extremely active user forum

10

Wien2k VO2 (crystal) LiMn2O4 TiO2 ZrO2 Nb1-xMgxB2 LixTiP4 (x=2-

11) LiK edge in Li Li2O and LiMn2O4 Si layers

ferroelectric transition in BaTiO3

helliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphellip TiC TiN

Quantum

ESPRESSO

Boron Nitrogen doped graphene different phases of Al2O3

VASP No direct implementation (derived from DOS) C60

Simulated EELS for K edge EELS of

Carbon in TiC using (2x2x2) supercell

1000 k points

100 k points

I did not use any core hole approximation in

this calculation11

Sources

Wien2k manual Tutorial from 2007 PSU

workshop

SaX manual

Presentation from David Mullers summer

school pdf

Calculations are performed in NERSC using

Wien2k v101 and Telnes2

12

Page 9: Quick DFT tour of Electron Energy Loss  Spectrum (EELS)

Available softwares and pros and cons

Wien2k Quantum ESPRESSO

(External suite SaX)

Telnes (code) SaX external code

Double differential

scattering cross

section on a

grid of energy loss

Macroscopic

dielectric tensor

within the Random

Phase Approximation

with or without

excitonic effects as a

function of energy

Computationally

less expensive

Very expensive

Applied to various

systems

Not too many

published papers

Band structure codes

PARATEC (Cabaret et al2007Gaudryetal2005)

PWSCF(Cabaret et al2010Juhin et al2010)

CASTEP(Gao et al2008)

WIEN2K(Schwarz et al 2002)

Real space multiple scattering codes

FDMNES (Joly 2003)

FEFF(Rehr andAlbers2000)

Molecular DFT codes

STOBE(Kolczewski andHermann2005)

ORCA (George etal2008)

9

Literature Review

As per my understanding the advantages of Wien2k is

Can handle large system

No need to worry about core hole pseudopotentials

Applied to TM and Lanthanide including Magnetic transitions

Parallel implementation

Option of using relativistic correction

User friendly interface for generating input files

Extremely active user forum

10

Wien2k VO2 (crystal) LiMn2O4 TiO2 ZrO2 Nb1-xMgxB2 LixTiP4 (x=2-

11) LiK edge in Li Li2O and LiMn2O4 Si layers

ferroelectric transition in BaTiO3

helliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphellip TiC TiN

Quantum

ESPRESSO

Boron Nitrogen doped graphene different phases of Al2O3

VASP No direct implementation (derived from DOS) C60

Simulated EELS for K edge EELS of

Carbon in TiC using (2x2x2) supercell

1000 k points

100 k points

I did not use any core hole approximation in

this calculation11

Sources

Wien2k manual Tutorial from 2007 PSU

workshop

SaX manual

Presentation from David Mullers summer

school pdf

Calculations are performed in NERSC using

Wien2k v101 and Telnes2

12

Page 10: Quick DFT tour of Electron Energy Loss  Spectrum (EELS)

Literature Review

As per my understanding the advantages of Wien2k is

Can handle large system

No need to worry about core hole pseudopotentials

Applied to TM and Lanthanide including Magnetic transitions

Parallel implementation

Option of using relativistic correction

User friendly interface for generating input files

Extremely active user forum

10

Wien2k VO2 (crystal) LiMn2O4 TiO2 ZrO2 Nb1-xMgxB2 LixTiP4 (x=2-

11) LiK edge in Li Li2O and LiMn2O4 Si layers

ferroelectric transition in BaTiO3

helliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphelliphellip TiC TiN

Quantum

ESPRESSO

Boron Nitrogen doped graphene different phases of Al2O3

VASP No direct implementation (derived from DOS) C60

Simulated EELS for K edge EELS of

Carbon in TiC using (2x2x2) supercell

1000 k points

100 k points

I did not use any core hole approximation in

this calculation11

Sources

Wien2k manual Tutorial from 2007 PSU

workshop

SaX manual

Presentation from David Mullers summer

school pdf

Calculations are performed in NERSC using

Wien2k v101 and Telnes2

12

Page 11: Quick DFT tour of Electron Energy Loss  Spectrum (EELS)

Simulated EELS for K edge EELS of

Carbon in TiC using (2x2x2) supercell

1000 k points

100 k points

I did not use any core hole approximation in

this calculation11

Sources

Wien2k manual Tutorial from 2007 PSU

workshop

SaX manual

Presentation from David Mullers summer

school pdf

Calculations are performed in NERSC using

Wien2k v101 and Telnes2

12

Page 12: Quick DFT tour of Electron Energy Loss  Spectrum (EELS)

Sources

Wien2k manual Tutorial from 2007 PSU

workshop

SaX manual

Presentation from David Mullers summer

school pdf

Calculations are performed in NERSC using

Wien2k v101 and Telnes2

12