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Introd Reliabl coupled importa dimens signal second Schulte simulat present ProFit distorti tuning broade finally Materi 2D JPR (Fig. A The se 2ms. M tails in macrom maxim using macrom the bas (R2010 free pa numbe model- and se tensor the fina the sam Result The fit to the respect propos inclusio linesha some Macro well an still c proble improv (G & H is able occur could macrom data. Refere [1] R S [2] R S [3] Ma [4] D M 1 In duction le and unambiguo d spin systems lik ance in many psyc sional JPRESS sp overlap by spread d frequency dimen e et al., which all ted basis spectra t in the present v and to tackle pr ions and lineshape of the included p ening and amplitud compared to the o ials & Methods RESS spectra wer A). The minimum a cond frequency di Maximum echo sam n the reconstructed molecular baseline mum echo sampled the same acquisi molecular baseline sis set (Fig B). T 0b, The MathWork arameters were es er of metabolites a -free two dimensio lf-deconvolution spline baseline an al fit. The new alg me in-vivo data set ts & Discussion t results using the fitted spectrum, tively. Figures D, ed improved vers on of macromolec ape model (Fig. I & of the problems omolecular contrib nd also residual t learly identified ms are drastically vement on the fit H). Another refin e to handle enve during the whole be shown that molecule signals c ences Schulte et al., NMR Schulte et al., NMR audsley, JMR (199 M Sima et al., Mea nstitute for Biomed ous detection and q ke Glutamate, Gl chiatric diseases is pectroscopy showe ding the spectral in nsion. A software lows two dimensi similar to LCMo version of ProFit. roblems like mac e distortions. In ad rior knowledge re des of the resonan original version of re acquired from achievable echo tim imension was enc mpling was used to d spectrum to prev e was measured u d basis set of 20 ition parameters e was denoised an The revised versio ks, Inc., Natick, M timated from prel and degrees of fre onal lineshape wa [3, 4]. Finally all nd the spline-base gorithm was comp t. old ProFit tool are the residual and F and H show the sion of ProFit. Ex cular baseline sign & J). From the co s of the previou butions at about tails of spectral co within the noi y reduced in the quality is clearly nement comes fro elope distortions e duration of an e including featur can significantly i R in Biomed (2006 R in Biomed (2006 5), 106(B): 47–57 as. Sci. Technol. (2 Ale dical Engineering, quantification of m utamine or GABA s impeded by spec ed to significantly nformation of coup tool called ProFit ional prior knowl odel. However, so The aim of this cromolecular base ddition possibilitie egarding phase and nce lines are prov ProFit. the human brain me was 31ms and coded by 100 steps o improve SNR an vent overlap [2]. using a double inv metabolites was as for the in-viv nd included as an on of ProFit was MA, USA). Starting liminary fit iterati eedom. Prior to th as calculated based l metabolites toge d lineshape mode pared to the old P e shown in Fig. C, d a projection a e results from the xcellent fit quality nals as shown in F omparison of the s version of Pro 1ppm could not b omponents like c se (Fig. E). Al revised version ( y visible in the pr om the complex li and also phase experiment (Fig. res like 2D mod improve fitting re 6), 19: 255–263 6), 19: 264–270 7 2009) Pr xander Fuchs 1 , Pe University and ET metabolites repres A, which are of s ctral overlap at 3T. y reduce the probl pled spin systems t [1] was introduc ledge fitting using ome drawbacks ar s work was to im elines, residual ba s for more flexibl d frequency offset vided. The fit qua on a Philips 3T s the TR was set 16 s with a t1 increm nd to produce tilted A metabolite null version sequence. simulated in GA vo scan. The me additional metabo implemented in M g values for the dif ons using an incr he last fitting itera d on regularized s ether with an add l were used to cal ProFit version app , E and G correspo along the t1 dim same data set usi y is achieved due Fig. B and a mod residuals (Fig. E oFit become app be handled suffic creatine at 3ppm c l these systemat (Fig. F) and the o rojection spectra ineshape model, deviations, whic I & J). In conclu del-free lineshap esults for 2 dimen oFit revised ter Boesiger 2 , and TH Zurich, Zurich senting special . Two- lem of into a ced by g fully re still mprove aseline e fine- ts, line ality is system 600ms. ment of d peak led 2D A 2D AMMA asured olite in Matlab fferent reasing ation a splines ditional lculate lied to onding ension ing the to the el-free E & F) parent. ciently can be tic fit overall of Fig which ch can usion it e and nsional C G A E Figu volu surfa illustogeG). prop and I d Anke Henning 2 h, Zurich, Switzerla ures (A-J): (A) unteer. In (B) the ace splines as c trated. In the left ether with the resid On the right side posed ProFit versiimaginary part of and, 2 University an D H B F shows the mea final contribution calculated from column the fitted dual and t1 projece (D, F & H) the on are presented. the spline based lJ nd ETH Zurich asured spectrum n of macromolecul the proposed Pspectrum of the o ted spectrum are s corresponding pl Subplots (I & J) ine shape model u from a healthy les together with roFit version is old ProFit version shown in (C, E & ots of the newly finally show real sed. 1758 Proc. Intl. Soc. Mag. Reson. Med. 20 (2012)

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IntrodReliablcoupledimportadimenssignal secondSchultesimulatpresentProFit distortituning broadefinally Materi2D JPR(Fig. AThe se2ms. Mtails inmacrommaximusing macromthe bas(R2010free panumbemodel-and setensor the finathe samResultThe fitto the respectproposinclusiolineshasome Macrowell anstill cprobleimprov(G & His ableoccur could macromdata. Refere[1] R S[2] R S[3] Ma[4] D M

1In

duction le and unambiguod spin systems likance in many psycsional JPRESS spoverlap by spread

d frequency dimene et al., which allted basis spectra t in the present vand to tackle pr

ions and lineshapeof the included p

ening and amplitudcompared to the oials & Methods RESS spectra wer

A). The minimum acond frequency di

Maximum echo samn the reconstructedmolecular baseline

mum echo sampledthe same acquisimolecular baselinesis set (Fig B). T0b, The MathWorkarameters were eser of metabolites a-free two dimensiolf-deconvolution spline baseline anal fit. The new alg

me in-vivo data setts & Discussion t results using the

fitted spectrum, tively. Figures D, ed improved verson of macromolec

ape model (Fig. I &of the problems

omolecular contribnd also residual tlearly identified ms are drasticallyvement on the fitH). Another refine to handle enveduring the wholebe shown that

molecule signals c

ences Schulte et al., NMRSchulte et al., NMRaudsley, JMR (199M Sima et al., Mea

nstitute for Biomed

ous detection and qke Glutamate, Glchiatric diseases is

pectroscopy showeding the spectral innsion. A software lows two dimensisimilar to LCMo

version of ProFit. roblems like mace distortions. In adrior knowledge redes of the resonanoriginal version of

re acquired from achievable echo timimension was encmpling was used tod spectrum to preve was measured ud basis set of 20 ition parameters e was denoised an

The revised versioks, Inc., Natick, Mtimated from preland degrees of freonal lineshape wa[3, 4]. Finally allnd the spline-basegorithm was compt.

old ProFit tool arethe residual and

F and H show thesion of ProFit. Excular baseline sign& J). From the cos of the previoubutions at about tails of spectral co

within the noiy reduced in the quality is clearly

nement comes froelope distortions e duration of an e

including featurcan significantly i

R in Biomed (2006R in Biomed (20065), 106(B): 47–57

as. Sci. Technol. (2

Aledical Engineering,

quantification of mutamine or GABAs impeded by speced to significantlynformation of couptool called ProFit

ional prior knowlodel. However, soThe aim of this

cromolecular baseddition possibilitieegarding phase andnce lines are provProFit.

the human brain me was 31ms and

coded by 100 stepso improve SNR anvent overlap [2].

using a double invmetabolites was

as for the in-vivnd included as an on of ProFit was

MA, USA). Startingliminary fit iteratieedom. Prior to thas calculated basedl metabolites toged lineshape modepared to the old P

e shown in Fig. C,d a projection ae results from the

xcellent fit qualitynals as shown in Fomparison of the s version of Pro1ppm could not bomponents like cse (Fig. E). Alrevised version (

y visible in the prom the complex li

and also phase experiment (Fig. res like 2D modimprove fitting re

6), 19: 255–263 6), 19: 264–270

7 2009)

Prxander Fuchs1, PeUniversity and ET

metabolites represA, which are of sctral overlap at 3T.y reduce the problpled spin systems t [1] was introducledge fitting usingome drawbacks ars work was to imelines, residual bas for more flexibld frequency offsetvided. The fit qua

on a Philips 3T sthe TR was set 16s with a t1 incremnd to produce tiltedA metabolite nullversion sequence. simulated in GA

vo scan. The meadditional metaboimplemented in M

g values for the difons using an incr

he last fitting iterad on regularized sether with an addl were used to cal

ProFit version app

, E and G correspoalong the t1 dim

same data set usiy is achieved due Fig. B and a modresiduals (Fig. E

oFit become appbe handled suffic

creatine at 3ppm cl these systemat(Fig. F) and the orojection spectra ineshape model,deviations, whicI & J). In concludel-free lineshapesults for 2 dimen

oFit revised ter Boesiger2, and TH Zurich, Zurich

senting special . Two-lem of into a

ced by g fully re still

mprove aseline e fine-ts, line ality is

system 600ms. ment of

d peak led 2D A 2D

AMMA asured

olite in Matlab fferent reasing ation a splines

ditional lculate lied to

onding ension ing the to the el-free

E & F) parent. ciently can be tic fit

overall of Fig which

ch can usion it e and

nsional

C

G

A

E

FiguvolusurfaillusttogetG). Opropand i

I

d Anke Henning2 h, Zurich, Switzerla

ures (A-J): (A) unteer. In (B) the ace splines as ctrated. In the left

ether with the residOn the right side

posed ProFit versioimaginary part of

and, 2University an

D

H

B

F

shows the meafinal contribution

calculated from column the fitted

dual and t1 projecte (D, F & H) the on are presented. the spline based li

J

nd ETH Zurich

asured spectrum n of macromolecul

the proposed Prspectrum of the oted spectrum are scorresponding plSubplots (I & J)

ine shape model u

from a healthy les together with roFit version is

old ProFit version shown in (C, E & ots of the newly finally show real sed.

1758Proc. Intl. Soc. Mag. Reson. Med. 20 (2012)