new insight into hbv evolution - genaforevolution: mummy hbv near-identical to contemporary strains....

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Jan Felix Drexler Institute of Virology, University of Bonn New insight into HBV evolution

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Page 1: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Jan Felix Drexler

Institute of Virology, University of Bonn

New insight into HBV evolution

Page 2: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

How old are hepadnaviruses – endogenous bird & reptile

variants well >60 million years

Suh, PLoS Gen, 2015

Page 3: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Consistent with diverse hepadnaviruses in lower

vertebrates

Dill, J Virol, 2016

Mammal-like?

Page 4: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Hepatology, 2012

Slow long-term evolution:

Mummy HBV

near-identical to contemporary

strains

Page 5: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Extant bats are old mammalian lineages – introduction of

ancestral HBV into mammals?

Simmons, Science 2005

Page 6: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Screening of 3,000 bats for HBV

Drexler/Geipel et al., 2013, PNAS

Page 7: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Roundleaf bat H. Ruber RBHBV

Tent-making bat U. Bilobatum TBHBV

Horseshoe bat R. Alcyone HBHBV

natalie's Life List, inaturalist.org

3 viruses

1

2 3

Page 8: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Relevance of bats - Chiropteran hosts harbor

largest hepadnavirus diversity within mammals

Rasche et al., Curr Opinion Virol, 2016

Two HBV species in primates: HBV WMHBV

Page 9: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Primate HBV ancestors: Acquisition of bat viruses by

monkeys?

Rasche et al., Curr Opinion Virol, 2016

Page 10: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Lack of studies into New World non-human

primates

123 animals 9 species

4 studies in 45 years

Page 11: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Brazil: 5th largest country Highest primate diversity

worldwide

Brazil 118 species

Page 12: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Screening of ca. 100 NHP A new primate HBV species:

CMHBV

Dominguez/König/Rasche et al., unpublished

Page 13: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Potentially chronic infection: core deletions and no signs

of inflammation

Dominguez/König/Rasche et al., unpublished

Page 14: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Deep HBV sister lineages in new world monkeys

Dominguez/König/Rasche et al., unpublished

Page 15: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Evidence for ancient co-speciation of primate

hepadnaviruses and their hosts – but not for HBV

Dominguez/König/Rasche et al., unpublished

Page 16: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Ancestral state reconstructions

Primate hepadnavirus origins in NHP HBV in humans?

Dominguez/König/Rasche et al., unpublished

Page 17: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Hypothesis testing

HBV may have evolved in hominoid ancestors 17 million years ago

Dominguez/König/Rasche et al., unpublished

You are here!

Page 18: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

No evidence for ancestry of F/H

in American monkeys

Introduction

along human migration?

Dominguez/König/Rasche et al., unpublished

Page 19: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

In sum • Hepadnaviruses are an extremely old

virus family • Primate hepadnaviruses may be the

result of a host switch millions of years ago

• HBV likely evolved in hominoid ancestors, preceding the human stem lineage

• Divergent New World genotypes F/H may originate from pre-historic human migration

Page 20: New insight into HBV evolution - Genaforevolution: Mummy HBV near-identical to contemporary strains. Extant bats are old mammalian lineages – introduction of ancestral HBV into mammals?

Virology, Bonn Christian Drosten Victor Max Corman Monika Eschbach-Bludau Sebastian Brünink Tobias Bleicker Andrea Rasche Marcel Müller FLI, Riems Rainer Ulrich Martin Beer

Ulm Elisabeth Kalko Marco Tschapka Stellenbosch Wolfgang Preiser Sonja Matthee Kruger NP Danny Govender

EMC, Rotterdam Ab Osterhaus Thijs Kuiken Debby van Riel JMA van den Brand Virology, Berlin Detlef Krüger Virology, Giessen Dieter Glebe Virology, Heidelberg, Ralf Bartenschlager Virology, Hannover Georg Herrler Bernhard Nocht Institut, HH Thomas Kruppa Jonas Schmidt-Chanasit RIVM, Netherlands Chantal Reusken ILRI, Kenya Jörg Jores

Funded by

KCCR, Kumasi Augustina Annan Samuel Oppong Mexico Álvaro Aguilar Setién Veterinary Medicine, Salvador Roberto Franke Eduardo Netto Chumakov Institute, Moscow Alexander Lukashev CIRMF, Franceville Eric Leroy AFMB, Marseille Bruno Coutard