mössbauer spectroscopy · mössbauer spectroscopy the “light source”: decay scheme of 57co...
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Mössbauer Spectroscopy
Carsten Krebs
Department of Chemistry
Department of Biochemistry and Molecular Biology
The Pennsylvania State University
Recommended Literature
E. Münck “Aspects of 57Fe Mössbauer Spectroscopy”
Chapter 6 in Physical Methods in Bioinorganic Chemistry
L. Que, Jr. (editor)
University Science Books, 2000
P. Gütlich, E. Bill, A. X. Trautwein
“Mössbauer Spectroscopy and Transition Metal Chemistry”
Springer, 2011
Outline • General remarks
• Quadrupole doublet spectra (isomer shift, quadrupole splitting)
• Magnetically split spectra (spin expectation value, hyperfine tensor)
• The correlation between EPR and Mössbauer spectroscopies
(effective g-values and spin expectation values)
• How is the internal field oriented relative to the external field?
• How does the fluctuation rate of the electronic states affect the Mössbauer spectrum?
• Example 1: EPR and Mössbauer of the high-spin Fe(III) center in transferrin
• Example 2: EPR and Mössbauer of the Fe(II)/Fe(III) cluster in myo-inositol oxygenase
(incl. magnetic Mössbauer of dinuclear clusters)
• Example 3: Mössbauer studies of the Fe(III)/Fe(III) cluster E. coli RNR
• Example 4: The high-spin Fe(IV)-oxo intermediate in TauD
• Example 5: A mononuclear Fe-dinitrosyl complex with S = 1/2
• Considerations for sample preparation
The Electromagnetic Spectrum
nucleus
recoil energy:
ER = E02 / 2Mc2
Eγ = Enuc - ER
γ-photon
M
example: 57Fe
Eγ = 14.4 keV
ER = 2*10-3 eV
ΔE = 4.6*10-9 eV
Recoil Effect in “Free” Atoms
ER 5-6 orders of magnitude greater than natural linewidth
no resonance possible
=> Nuclear γ-Resonance cannot be observed with gases and liquids !
7
.. too short !
Recoil Effect in “Free” Atoms
Rudolf L. Mössbauer
• 1958: Discovers the “recoilless
nuclear resonance absorption of γ-
radiation”
• emitting and absorbing nuclei
must be embedded in solid
lattice
• there is recoil-less emission and
absorption of -photons (f-
factor)
• 1961: Receives the Nobel Prize in
Physics
Mössbauer periodic table
Periodic table of life
Mössbauer spectroscopy
The “light source”: Decay scheme of 57Co
57Co
57Fe
I = 5/2
I = 3/2
I = 1/2
Nuclear
Spin
136.4 keV
14.4 keV
• 3,300 times the energy
of a 285-nm UV photon
• recoil imparts significant
change of energy of the photon
• emitting and absorbing nuclei
must be embedded in solid lattice
• there is recoil-less emission and
absorption of -photons (f-factor)
• at low temperatures, all Fe species
have same f-factor
• fraction of Fe species in sample is
proportional to area of
Mössbauer subspectrum
Electron capture
91% 9%
Mössbauer spectroscopy
The “light source”: Decay scheme of 57Co
57Co
57Fe
I = 5/2
I = 3/2
I = 1/2
Nuclear
Spin
136.4 keV
14.4 keV
Electron capture
91% 9%
• Doppler effect allows the energy of the photon to be varied slightly
DE = E
v
c
v = source velocity
c = speed of light
Mössbauer spectroscopy
The “light source”: Decay scheme of 57Co
57Co
57Fe
I = 5/2
I = 3/2
I = 1/2
Nuclear
Spin
136.4 keV
14.4 keV
Electron capture
91% 9%
57Fe (sample)
0 Doppler velocity
abso
rpti
on
I = 3/2
I = 1/2
• Photon can be absorbed by a 57Fe nucleus in the sample
Experimental setup (transmission geometry)
v = 1 mm/s => DE = 4.8 10-8 eV
= 11.6 MHz
= 3.9 10-4 cm-1
= 5.6 K
Low-Field Mössbauer spectrometer
Sample Detector Velocity Transducer 57Co source
High-Field Mössbauer spectrometer
High-Field Mössbauer spectrometer
Magnetic field
-beam
Outline • General remarks
• Quadrupole doublet spectra (isomer shift, quadrupole splitting)
• Magnetically split spectra (spin expectation value, hyperfine tensor)
• The correlation between EPR and Mössbauer spectroscopies
(effective g-values and spin expectation values)
• How is the internal field oriented relative to the external field?
• How does the fluctuation rate of the electronic states affect the Mössbauer spectrum?
• Example 1: EPR and Mössbauer of the high-spin Fe(III) center in transferrin
• Example 2: EPR and Mössbauer of the Fe(II)/Fe(III) cluster in myo-inositol oxygenase
(incl. magnetic Mössbauer of dinuclear clusters)
• Example 3: Mössbauer studies of the Fe(III)/Fe(III) cluster E. coli RNR
• Example 4: The high-spin Fe(IV)-oxo intermediate in TauD
• Example 5: A mononuclear Fe-dinitrosyl complex with S = 1/2
• Considerations for sample preparation
Types of Mössbauer spectra: 1) Quadrupole Doublet
velocity [mm/s]
4 2 0 -2 -4
abso
rpti
on [
%]
6
0
DEQ
δ
I = 3/2
I = 1/2
DEQ
Quadrupole Splitting (ΔEQ)
ES EA
Source Absorber
Isomer shift (δ)
MI = 3/2
MI = 1/2
MI = 1/2
Types of Mössbauer spectra: 1) Quadrupole Doublet
velocity [mm/s]
4 2 0 -2 -4
abso
rpti
on [
%]
6
0
DEQ
δ
DEQ
Quadrupole Splitting (ΔEQ)
MI = 3/2
MI = 1/2
MI = 1/2
How long are the black arrows if
the red double arrow is 1 m?
Types of Mössbauer spectra: 1) Quadrupole Doublet
velocity [mm/s]
4 2 0 -2 -4
abso
rpti
on [
%]
6
0
DEQ
δ
DEQ
Quadrupole Splitting (ΔEQ)
MI = 3/2
MI = 1/2
MI = 1/2
How long are the black arrows if
the red double arrow is 1 m?
ΔE = “2 mm/s” = 9.6 10-8 eV
E = 14.4 keV
ΔE/E = 6.7 10-12
150,000,000,000 m
(distance earth to sun)
Isomer shift
δ = ( |sample(0)|2 - | source(0)|2 ) 4/5 π Ze2 R2 (ΔR/R)
• ΔR/R is the change of radius in ground and excited state (negative for 57Fe).
• |(0)|2 is the probability to find an electron at the 57Fe nucleus
• only s-electrons have non-zero probability to be at nucleus
• d-electrons affect s-electron density by shielding
properties of 57Fe nucleus electron density at nucleus
r(bohr)
nucleus 3d - electrons shield the nuclear potential for s - orbitals
atom
Typical isomer shift values for
various spin- and oxidation
states of iron
Fe(III) S=1/2
Fe(III) S=3/2
Fe(III) S=5/2
Fe(II) S=0
Fe(II) S=1
Fe(II) S=2
Fe(I) S=1/2
Fe(I) S=3/2
Fe(V) S=1/2
Fe(V) S=3/2
Fe(IV) S=0
Fe(IV) S=1
Fe(IV) S=2
Fe(VI) S=0
Fe(VI) S=1 (relative to -iron at 300 K ) (adapted from Gütlich, Bill,
Trautwein Mössbauer Spectroscopy
and Transition Metal Chemistry,
Springer 2011)
Isomer shift correlations
• Oxidation State - number of 3d valence electrons at the iron
(δ increases with 3d population)
• Spin State - bond lengths influence the covalency
(lower δ for low-spin than for high-spin …)
• Nature of Ligands - covalency of chemcial bonds
(δ decreases with higher covalency)
δ (4-coordination) < δ (6-coordination)
δ (sulfur ligands) < δ (nitrogen ligands)
Oxidation state: (FeIV) < (FeIII) < (FeII)
number of d-electrons increases
shielding of s-electrons increases
|(0)|2 decreases
increases (because ΔR/R is negative)
Spin state: (low-spin) < (high-spin)
low-spin complexes have shorter, more covalent M-L bonds
less d-electron density
shielding of s-electrons decreases
|(0)|2 increases
decreases (because ΔR/R is negative)
Ligands: (S-ligands) < (N,O-ligands)
(4-coordinate) < (6-coordinate)
Quadrupole splitting
Q
∇E
E
electric field
lines
Nuclei with I > 1/2 have an
electric quadrupole moment Q,
which has different energies in an
electric field gradient ∇E (efg).
Quadrupole splitting
- theoretical '2D' model: the four model charges ±q generate an inhomogeneous
field with an electric field gradient (efg)
favorable orientation unfavorable orientation
Electric charge distribution and EFG tensor
between 0 and 1
only two independent comp.
Ĥq = I • Q • I
= eQVzz/12 [ 3 Iz2 – I (I + 1) + (Ix
2 – Iy2)]
DEQ = eQVzz/2 [ 1 + 2/3]1/2
= (Vxx – Vyy) / Vzz (asymmetry parameter)
Expectation values of the efg tensor elements
(Vii)val / e<r-3> for d-electrons
orbital Vxx Vyy Vzz
dx2-y2 -2/7 -2/7 4/7 0
dz2 +2/7 +2/7 -4/7 0
dxy -2/7 -2/7 +4/7 0
dxz -2/7 +4/7 -2/7 +3
dyz +4/7 -2/7 -2/7 -3
to convert Vii in ΔEQ multiply by 4.2 mms-1/ 4/7 e <r-3>
(for <r-3>=5a0-3, Q=0.15b)
(Gütlich, Bill, Trautwein, Mössbauer Spectroscopy and Transition Metal Chemistry, Springer 2011 )
for a general 3dn valence electron configuration:
add up the individual contributions for all d-electrons
Typical values of and DEQ for biological samples
Oxidation state Spin state Ligands (mm/s) DEQ (mm/s)
Fe(II) S = 2 heme 0.85 - 1.0 1.5 - 3.0
Fe-(O/N) 1.1 - 1.3 2.0 - 3.2
Fe/S 0.60 - 0.70 2.0 - 3.0
S = 0 heme 0.30 - 0.45 < 1.5
Fe(III) S = 5/2 heme 0.35 – 0.45 0.5 – 1.5
Fe-(O/N) 0.40 – 0.60 0.5 – 1.5
Fe/S 0.20 – 0.35 < 1.0
S = 3/2 heme 0.30 – 0.40 3.0 – 3.6
S = 1/2 heme 0.15 – 0.25 1.5 – 2.5
Fe-(O/N) 0.10 – 0.25 2.0 – 3.0
Fe(IV) S = 2 Fe-(O/N) 0.0 – 0.35 0.5 – 1.5
S = 1 heme 0.0 – 0.10 1.0 – 2.0
Fe-(O/N) -0.20 – 0.10 0.5 – 4.3
Adapted from E. Münck, Physical Methods in Bioinorganic Chemistry, L. Que, Jr. (ed) 2000
Calculation of and DEQ using DFT
• Recent important advances by Neese and co-workers showed that Mössbauer
parameters can be predicted well computationally using DFT methods
• Isomer shifts and quadrupole splittings are predicted to within 0.1 mm/s and
0.5 mm/s, respectively
• One can evaluate hypothetical structures and compare them to the
experimentally determined Mössbauer parameters
e.g. F. Neese, (2002) Inorg. Chim. Acta 337C, 181.
Outline • General remarks
• Quadrupole doublet spectra (isomer shift, quadrupole splitting)
• Magnetically split spectra (spin expectation value, hyperfine tensor)
• The correlation between EPR and Mössbauer spectroscopies
(effective g-values and spin expectation values)
• How is the internal field oriented relative to the external field?
• How does the fluctuation rate of the electronic states affect the Mössbauer spectrum?
• Example 1: EPR and Mössbauer of the high-spin Fe(III) center in transferrin
• Example 2: EPR and Mössbauer of the Fe(II)/Fe(III) cluster in myo-inositol oxygenase
(incl. magnetic Mössbauer of dinuclear clusters)
• Example 3: Mössbauer studies of the Fe(III)/Fe(III) cluster E. coli RNR
• Example 4: The high-spin Fe(IV)-oxo intermediate in TauD
• Example 5: A mononuclear Fe-dinitrosyl complex with S = 1/2
• Considerations for sample preparation
Types of Mössbauer spectra: 2) Magnetic Spectra
-1/2
+1/2
+1/2
-1/2
-3/2
+3/2
I=3/2
I=1/2
Dm -1 0 +1 -1 0 +1
• Splitting of the six lines increases as the magnetic field experienced by the 57Fe
nucleus (the effective magnetic field) increases
Types of Mössbauer spectra: 2) Magnetic Spectra
-1/2
+1/2
+1/2
-1/2
-3/2
+3/2
I=3/2
I=1/2
Dm -1 0 +1 -1 0 +1
• Splitting of the six lines increases as the magnetic field experienced by the 57Fe
nucleus (the effective magnetic field) increases
Types of Mössbauer spectra: 2) Magnetic Spectra
-1/2
+1/2
+1/2
-1/2
-3/2
+3/2
I=3/2
I=1/2
• Intensity ratio of the six lines depends on the orientation of the effective
magnetic field to the propagation direction of the beam.
Dm -1 0 +1 -1 0 +1
Powder spectrum 3:2:1:1:2:3
Beffective || -beam 3:0:1:1:0:3
Beffective -beam 3:4:1:1:4:3
Intensity of Δm = 1 lines (1 +cos2)
Intensity of Δm = 0 lines sin2
Selection rule Δm = 0, 1
Types of Mössbauer spectra: 2) Magnetic Spectra
-1/2
+1/2
+1/2
-1/2
-3/2
+3/2
I=3/2
I=1/2
• inner four lines are shifted relative to the outer two lines
What causes the large field sensed by the 57Fe nucleus?
The paramagnetism of the Fe ions!
High-spin Fe3+
Low-spin Fe2+
High-spin Fe2+
Low-spin Fe3+
S = 2 S = 5/2
S = 0 S = 1/2
High-spin Fe4+
Low-spin Fe4+
S = 2
S = 1
Outline • General remarks
• Quadrupole doublet spectra (isomer shift, quadrupole splitting)
• Magnetically split spectra (spin expectation value, hyperfine tensor)
• The correlation between EPR and Mössbauer spectroscopies
(effective g-values and spin expectation values)
• How is the internal field oriented relative to the external field?
• How does the fluctuation rate of the electronic states affect the Mössbauer spectrum?
• Example 1: EPR and Mössbauer of the high-spin Fe(III) center in transferrin
• Example 2: EPR and Mössbauer of the Fe(II)/Fe(III) cluster in myo-inositol oxygenase
(incl. magnetic Mössbauer of dinuclear clusters)
• Example 3: Mössbauer studies of the Fe(III)/Fe(III) cluster E. coli RNR
• Example 4: The high-spin Fe(IV)-oxo intermediate in TauD
• Example 5: A mononuclear Fe-dinitrosyl complex with S = 1/2
• Considerations for sample preparation
Spin Hamiltonian for EPR Spectroscopy
Ĥ = μB S • g • B + S • D • S + S • A • I
electron Zeeman zero field splitting (ZFS) hyperfine coupling
= μB S • g • B + D (Sz2 – S(S+1)/3) + E (Sx
2 – Sy2) + S • A • I
• ZFS removes the (2S + 1)-fold degeneracy of the spin
• Only observed for systems with S 1
• D and E are axial and rhombic ZFS parameters
• E/D also known as “rhombicity”
• E/D can take values between 0 and 1/3
EPR and Mössbauer spectroscopy are complementary
EPR
Integer Spin Half-Integer Spin
S = 1/2, 3/2, 5/2, … S = 0, 1, 2, 3, …
• EPR-silent • EPR-active
(in most cases)
Electron
Spin
Method
EPR and Mössbauer spectroscopy are complementary
EPR
Integer Spin Half-Integer Spin
S = 1/2, 3/2, 5/2, … S = 0, 1, 2, 3, …
• EPR-silent • EPR-active
(in most cases)
Electron
Spin
Method
-3
0
3
0 0.25 0.5 0.75 1-3
0
3
0 0.25 0.5 0.75 1
B
Ener
gy
(cm
-1)
B
Ener
gy
(cm
-1)
Effective g-values for an S = 5/2 spin system with ZFS
Bx By Bz
0
2
4
6
8
10
12
0 0.1 0.2 0.3
0
1
2
3
4
5
6
7
0 0.1 0.2 0.3
0
2
4
6
8
10
12
0 0.1 0.2 0.3
E/D g
eff
gef
f g
eff
0
6
12
0
3
6
0 0.1 0.2 0.3
0 0.1 0.2 0.3
12
6
0
0 0.1 0.2 0.3
6
0
0
6
0
0
2
10
6
Calculated with D = 2 cm-1 and E/D = 0
Ener
gy
(cm
-1)
z
x y
z
x y
z x
y
0 0.5 1 0 0.5 1 0 0.5 1
Effective g-values for an S = 5/2 spin system with ZFS
Bx By Bz
0.9
0.9
4.3
9.6
0.6
4.3
0.6
9.6
4.3
0
2
4
6
8
10
12
0 0.1 0.2 0.3
0
1
2
3
4
5
6
7
0 0.1 0.2 0.3
0
2
4
6
8
10
12
0 0.1 0.2 0.3
E/D g
eff
gef
f g
eff
0
6
12
0
3
6
0 0.1 0.2 0.3
0 0.1 0.2 0.3
12
6
0
0 0.1 0.2 0.3
Calculated with D = 2 cm-1 and E/D = 1/3
Ener
gy
(cm
-1)
z
x y
z
x y
z x
y
0 0.5 1 0 0.5 1 0 0.5 1
Powder EPR spectra of species with anisotropic g-values
Taken from G. Palmer, Physical Methods in Bioinorganic Chemistry, L. Que (ed) 2000
g = 714.484 [GHz] / B [G]
Effective g-values for an S = 5/2 spin system with ZFS
0
2
4
6
8
10
12
0 0.1 0.2 0.3
0
1
2
3
4
5
6
7
0 0.1 0.2 0.3
0
2
4
6
8
10
12
0 0.1 0.2 0.3
E/D g
eff
gef
f g
eff
0
6
12
0
3
6
0 0.1 0.2 0.3
0 0.1 0.2 0.3
12
6
0
0 0.1 0.2 0.3
50
9.7 4.3
400 300 200 100
B (mT)
protocatechuate-3,4-dioxygenase
Adapted from G. Palmer, Physical Methods in Bioinorganic Chemistry,
L. Que (ed) 2000
rhombic 4.3-signal z
x y
z
x y
z x
y
Spin Hamiltonian for Mössbauer Spectroscopy
Ĥ = μB S • g • B + S • D • S + S • A • I - gNμN B • I + I • Q • I
electron Zeeman zero field splitting hyperfine 57Fe nuclear Zeeman quadrupole splitting
nuclear spin electron spin hyperfine coupling
In small external magnetic fields (e.g. 10 mT) the first two term are much larger
than hyperfine coupling
Spin Hamiltonian for Mössbauer Spectroscopy
Ĥ = μB S • g • B + S • D • S + S • A • I - gNμN B • I + I • Q • I
electron Zeeman zero field splitting hyperfine 57Fe nuclear Zeeman quadrupole splitting
= S • A • I - gNμN B • I + I • Q • I
S is spin expectation value; it contains information of electronic structure
nuclear spin electron spin hyperfine coupling
Spin Hamiltonian for Mössbauer Spectroscopy
Ĥ = μB S • g • B + S • D • S + S • A • I - gNμN B • I + I • Q • I
electron Zeeman zero field splitting hyperfine 57Fe nuclear Zeeman quadrupole splitting
= S • A • I - gNμN B • I + I • Q • I
S is spin expectation value; it contains information of electronic structure
= - gNμN [ - S • A/ gNμN + B ] • I + I • Q • I
Bint Bext
Beff
nuclear spin electron spin hyperfine coupling
Spin Hamiltonian for Mössbauer Spectroscopy
Ĥ = μB S • g • B + S • D • S + S • A • I - gNμN B • I + I • Q • I
electron Zeeman zero field splitting hyperfine 57Fe nuclear Zeeman quadrupole splitting
= S • A • I - gNμN B • I + I • Q • I
S is spin expectation value; it contains information of electronic structure
= - gNμN [ - S • A/ gNμN + B ] • I + I • Q • I
Bint Bext
Beff
The internal magnetic field, Bint, depends on
nuclear spin electron spin hyperfine coupling
• the spin expectation value, S, and the
• hyperfine coupling tensor, A.
A(57Fe) Hyperfine Coupling Tensor
a.) Fermi - Contact Contribution
Exchange interaction affords polarization of the filled inner s-shells.
(different radial distribution of spin-up and spin-down electrons)
- in general the largest contribution to A
- isotropic, negative sign (-20 to -22 T)
A = AFermi-contact + Adipole + Aorbit
A(57Fe) Hyperfine Coupling Tensor
A = AFermi-contact + Adipole + Aorbit
Dipole - Contribution, → Adipole
Arises from non-spherical distribution of the electronic spin density.
Orbital - Contribution, → Aorbit
Arises from non-quenched orbital momentum of the electronic state due to
spin-orbit coupling (SOC).
Spin expectation values for half-integer spin systems
• S ~ dE/dB
• Have the “full” expectation even in small external fields
• S ≈ geff/4
• Correlation between EPR and Mössbauer!
Spin expectation values for half-integer spin systems
• S ~ dE/dB
• Have the “full” expectation even in small external fields
• S ≈ geff/4
• Correlation between EPR and Mössbauer!
• Each electronic state has a S associated with it
• First we look at properties of S first (magnitude, anisotropy,
orientation relative to external field);
• Next, we take into consideration that more than one state is
populated
Spin expectation values for S = 1/2
S is (nearly) isotropic [i.e. the same in the
x, y, and z-direction
-3
0
3
0 0.25 0.5 0.75 1
Ener
gy
(cm
-1)
S
B B
0 0.5 1.0
0.5
0
-0.5
S = 1/2
0 0.5 1
Calculated with D = 2 cm-1 and E/D = 1/3
Spin expectation values for S = 5/2 S
x
z
y
0.9
0.9
4.3
9.6
0.6
4.3
0.6
9.6
4.3
Ener
gy
(cm
-1)
S x, y, z
ground doublet middle doublet
0 0.5 1 B (T)
0 0.5 1 0 0.5 1 B (T) B (T)
-1
-2
0
0 0.5 1 B (T)
0 0.5 1 B (T)
Spin expectation values for integer spin systems
Have in most cases S 0 for Bext = 0
Small Bext may result in small S
[depends on ZFS parameters]
Large Bext results in sizeable S
Calculated for S = 2 with D = 10 cm-1 and E/D = 1/3
x
x y
y
z
z B (T)
0 4 8 0 4 8
B (T)
0 4 8
B (T)
0 4 8
S
0
-1
-2
B (T)
EPR and Mössbauer spectroscopy are complementary
• Small Bint
in small Bext
• Sizeable Bint in
small Bext Mössbauer
EPR
Integer Spin Half-Integer Spin
S = 1/2, 3/2, 5/2, … S = 0, 1, 2, 3, …
• EPR-silent • EPR-active
(in most cases)
* (there are exceptions, such as high-spin Fe(III)-superoxo complexes or the [3Fe-4S]0 cluster,
see Eckard Münck’s PSU workshop talk in 2014and Mike Hendrich’s section in Palmer chapter in Que book)
(analysis complex, but facili-
tated using results from EPR)
Electron
Spin
Method
(in most cases, but not always*)
Magnetically split spectra Quadrupole doublets
Outline • General remarks
• Quadrupole doublet spectra (isomer shift, quadrupole splitting)
• Magnetically split spectra (spin expectation value, hyperfine tensor)
• The correlation between EPR and Mössbauer spectroscopies
(effective g-values and spin expectation values)
• How is the internal field oriented relative to the external field?
• How does the fluctuation rate of the electronic states affect the Mössbauer spectrum?
• Example 1: EPR and Mössbauer of the high-spin Fe(III) center in transferrin
• Example 2: EPR and Mössbauer of the Fe(II)/Fe(III) cluster in myo-inositol oxygenase
(incl. magnetic Mössbauer of dinuclear clusters)
• Example 3: Mössbauer studies of the Fe(III)/Fe(III) cluster E. coli RNR
• Example 4: The high-spin Fe(IV)-oxo intermediate in TauD
• Example 5: A mononuclear Fe-dinitrosyl complex with S = 1/2
• Considerations for sample preparation
Orientation of Bint relative to Bext
Fe Representation of a Fe-containing protein
Representation of an isotropic S of an electronic state
of the Fe-containing protein (e.g. middle Kramers
doublet of a mononuclear rhombic ferric site
Representation of an anisotropic S of an electronic
state of the Fe-containing protein (e.g. ground Kramers
doublet of a mononuclear rhombic ferric site
Orientation of Bint relative to Bext
ray
ray
Bexternal
Bexternal
• The internal field is aligned antiparallel to the external field
Orientation of Bint relative to Bext
ray
Bexternal
or
• The internal field is oriented along the axis with the greatest component of S
• The orientation of S depends on molecular frame; thus, because molecules are frozen
randomly, the internal fields are oriented randomly (powder averaged spectrum)
Outline • General remarks
• Quadrupole doublet spectra (isomer shift, quadrupole splitting)
• Magnetically split spectra (spin expectation value, hyperfine tensor)
• The correlation between EPR and Mössbauer spectroscopies
(effective g-values and spin expectation values)
• How is the internal field oriented relative to the external field?
• How does the fluctuation rate of the electronic states affect the Mössbauer spectrum?
• Example 1: EPR and Mössbauer of the high-spin Fe(III) center in transferrin
• Example 2: EPR and Mössbauer of the Fe(II)/Fe(III) cluster in myo-inositol oxygenase
(incl. magnetic Mössbauer of dinuclear clusters)
• Example 3: Mössbauer studies of the Fe(III)/Fe(III) cluster E. coli RNR
• Example 4: The high-spin Fe(IV)-oxo intermediate in TauD
• Example 5: A mononuclear Fe-dinitrosyl complex with S = 1/2
• Considerations for sample preparation
Relaxation of the electronic states and
their effect on the Mössbauer spectrum
Paramagnetic Fe-sites have more than one electronic state; fluctuation rate between
electronic states needs to be considered for such systems.
Three cases are possible:
• The relaxation between electronic states is slow compared to the time scale of
Mössbauer spectroscopy (10-7 s).
(typically encountered for metalloproteins at 4.2 K)
• The relaxation between electronic states is fast compared to the time scale of
Mössbauer spectroscopy.
(encountered at “high” temperatures; depends on system under
consideration)
• The relaxation between electronic states is comparable to the time scale of
Mössbauer spectroscopy. This case is more difficult to treat and one tries to
avoid it by choosing different experimental conditions (temperature, external
field).
Slow relaxation limit
• Calculate S for each electronic state
• Calculate Mössbauer spectrum for each electronic state
• Add the subspectra of all electronic states according to their Boltzmann
population factors [~exp(-E/kT)]
• The resulting spectrum contains multiple subspectra (one for every electronic
state)
• The subspectra are magnetically split
-3
0
3
0 0.25 0.5 0.75 1
Ener
gy
(cm
-1)
B
Fast relaxation limit
• Calculate S for each electronic state
• Calculate the average spin expectation value, Sav, from the
individual S values according to their Boltzmann factors
• Calculate Mössbauer spectrum using Sav. There is only one
subspectrum associated with all electronic states
• In small magnetic fields Sav ≈ 0, therefore no hyperfine
interactions, i.e. spectrum is a quadrupole doublet
-3
0
3
0 0.25 0.5 0.75 1
Ener
gy
(cm
-1)
B
Cases when S is zero
• S = 0 Bint =0 quadrupole doublet for small Bext
1. Diamagnetic compounds
2. Paramagnetic compounds with integer spin ground state for
Bext = 0 (or Bext small)
3. Compound in fast relaxation limit in small magnetic field (then
Sav ≈ 0, therefore no hyperfine interactions, i.e. spectrum is a
quadrupole doublet
EPR and Mössbauer spectroscopy are complementary
• Quadrupole doublets
in small Bext
• Magnetically Split
Spectra (at low T)
Mössbauer
EPR
Integer Spin Half-Integer Spin
S = 1/2, 3/2, 5/2, … S = 0, 1, 2, 3, …
• EPR-silent • EPR-active
(in most cases)
(in most cases) (analysis complex, but facili-
tated using results from EPR) (analysis straightforward)
Electron
Spin
Method
• Magnetically Split
Spectra for large Bext
• Quadrupole doublets
at high temperatures
Outline • General remarks
• Quadrupole doublet spectra (isomer shift, quadrupole splitting)
• Magnetically split spectra (spin expectation value, hyperfine tensor)
• The correlation between EPR and Mössbauer spectroscopies
(effective g-values and spin expectation values)
• How is the internal field oriented relative to the external field?
• How does the fluctuation rate of the electronic states affect the Mössbauer spectrum?
• Example 1: EPR and Mössbauer of the high-spin Fe(III) center in transferrin
• Example 2: EPR and Mössbauer of the Fe(II)/Fe(III) cluster in myo-inositol oxygenase
(incl. magnetic Mössbauer of dinuclear clusters)
• Example 3: Mössbauer studies of the Fe(III)/Fe(III) cluster E. coli RNR
• Example 4: The high-spin Fe(IV)-oxo intermediate in TauD
• Example 5: A mononuclear Fe-dinitrosyl complex with S = 1/2
• Considerations for sample preparation
Example 1
The high-spin Fe(III) site in transferrin (S = 5/2)
The high-spin Fe(III) site in transferrin (S = 5/2)
0
2
4
6
8
10
12
0 0.1 0.2 0.3
0
1
2
3
4
5
6
7
0 0.1 0.2 0.3
0
2
4
6
8
10
12
0 0.1 0.2 0.3
doublet 1 doublet 2 doublet3
E/D 0 0.1 0.2 0.3
E/D 0 0.1 0.2 0.3
E/D 0 0.1 0.2 0.3
gef
f
gef
f
gef
f
0
6
12
0
6
12
0
3
6
The high-spin Fe(III) site in transferrin (S = 5/2)
Kretchmar, et al. Biol. Metals 1988 (1) 26
D = 0.25 cm-1
E/D = 0.3
g = 2.0
δ = 0.54 mm/s
ΔEQ = 0.30 mm/s
η = 1.0
A/gnn = (-22.3, -21.9, -22.3) T
50 mT
50 mT
perp
0.5 T
2 T
6 T
The high-spin Fe(III) site in transferrin (S = 5/2)
Kretchmar, et al. Biol. Metals 1988 (1) 26
50 mT
50 mT
perp
0.5 T
2 T
6 T
Outline • General remarks
• Quadrupole doublet spectra (isomer shift, quadrupole splitting)
• Magnetically split spectra (spin expectation value, hyperfine tensor)
• The correlation between EPR and Mössbauer spectroscopies
(effective g-values and spin expectation values)
• How is the internal field oriented relative to the external field?
• How does the fluctuation rate of the electronic states affect the Mössbauer spectrum?
• Example 1: EPR and Mössbauer of the high-spin Fe(III) center in transferrin
• Example 2: EPR and Mössbauer of the Fe(II)/Fe(III) cluster in myo-inositol oxygenase
(incl. magnetic Mössbauer of dinuclear clusters)
• Example 3: Mössbauer studies of the Fe(III)/Fe(III) cluster E. coli RNR
• Example 4: The high-spin Fe(IV)-oxo intermediate in TauD
• Example 5: A mononuclear Fe-dinitrosyl complex with S = 1/2
• Considerations for sample preparation
Example 2
The exchange-coupled high-spin Fe2(II/III) cofactor of myo-inositol oxygenase
The spin-coupled Fe2II/III cluster in myo-inositol oxygenase
• The active form of myo-inositol oxygenase harbors an antiferromagnetically coupled
dinuclear site with a high-spin Fe3+ ion (S1 = 5/2) and a high-spin Fe2+ ion (S2 = 2).
• It has an EPR-active S = 1/2 ground state.
Ener
gy
S = 9/2
S = 7/2
S = 5/2
S = 3/2
S = 1/2 1.5 J
2.5 J
3.5 J
4.5 J
• EPR-spectroscopy probes the total ground spin state of a coupled cluster.
g = (1.95, 1.81, 1.81)
ĤHDvV = J S1•S2
S = S1 + S2
E(S) = J/2 S (S + 1)
• Mössbauer-spectroscopy probes the local spin/oxidation state of each
57Fe-labeled site of a coupled cluster.
• At 120 K in zero field: fast-relaxation limit quadrupole doublets
intrinsic Fe oxidation state
The spin-coupled Fe2II/III cluster in myo-inositol oxygenase
= 1.09 mm/s
DEQ = 2.86 mm/s
high-spin Fe(II)
= 0.48 mm/s
DEQ = 1.10 mm/s
high-spin Fe(III)
• Mössbauer-spectroscopy probes the local spin/oxidation state of each 57Fe-labeled site of a coupled cluster.
• At 4.2 K: slow-relaxation limit magnetically split spectra
• S = 1/2 S isotropic field-orientation-dependence
The spin-coupled Fe2II/III cluster in myo-inositol oxygenase
Spin projection factors
Ĥhf = S1•A1•I1 + S2•A2•I2
hyperfine 1 hyperfine 2
= Stot• (c1 · A1) •I1 + Stot• (c2 · A2) •I2
Spin projection factors
ci = [S(S+1) + Si(Si+1) – Sj(Sj+1)] / [2S(S+1)]
For S = 1/2 ground state, c1= +7/3 and c2= -4/3 for S1 = 5/2 and S2 = 2
See A. Bencini and D. Gatteschi, EPR of Exchange Coupled Systems, Springer, 1989 for derivation of spin coupling coeff.
Spin Hamiltonian of an exchange-coupled cluster
Ĥhf = S1•A1•I1 + S2•A2•I2
hyperfine 1 hyperfine 2
= Stot• (c1 · A1) •I1 + Stot• (c2 · A2) •I2
• A1 and A2 (the intrinsic A-tensors given with respect to the local spin)
are dominated by the Fermi contact term, which is ~ -20 to -22 T.
• Analysis of field-dependent Mössbauer spectra allows c1 · A1 and c2 · A2 to
be determined.
• by determining A1 and A2, one can estimate c1and c2 and therefore determine
the nature of the spin coupling of the cluster.
• if hyperfine coupling is resolved in EPR, then |c1 · A1| and |c2 · A2| can be
determined, but not the sign of c1 and c2.
• Binternal > Bexternal
• Fe(III) site has “typical” field dependence (Bint antiparallel to Bext
for ground state, i.e. Beff decreases with increasing Bext)
• Fe(II) site has “atypical” field dependence (Bint parallel to Bext for
ground state)
• this behavior is due to opposite sign of spin coupling coefficients
The spin-coupled Fe2II/III cluster in myo-inositol oxygenase
Outline • General remarks
• Quadrupole doublet spectra (isomer shift, quadrupole splitting)
• Magnetically split spectra (spin expectation value, hyperfine tensor)
• The correlation between EPR and Mössbauer spectroscopies
(effective g-values and spin expectation values)
• How is the internal field oriented relative to the external field?
• How does the fluctuation rate of the electronic states affect the Mössbauer spectrum?
• Example 1: EPR and Mössbauer of the high-spin Fe(III) center in transferrin
• Example 2: EPR and Mössbauer of the Fe(II)/Fe(III) cluster in myo-inositol oxygenase
(incl. magnetic Mössbauer of dinuclear clusters)
• Example 3: Mössbauer studies of the Fe(III)/Fe(III) cluster E. coli RNR
• Example 4: The high-spin Fe(IV)-oxo intermediate in TauD
• Example 5: A mononuclear Fe-dinitrosyl complex with S = 1/2
• Considerations for sample preparation
Example 3
The exchange-coupled high-spin diiron cofactors of the class Ia ribonucleotide reductase from E. coli
Class I Ribonucleotide
Reductase from E. coli
Stubbe, et al. Chem. Rev. 2003,
2167-2202.
Proposed PCET (Proton Coupled
Electron Transfer) Pathway
Cofactor generation of E. coli
ribonucleotide reductase
Spectroscopic signatures of the active Fe2III/III-Y122• form
S = 1/2 for Tyr
Spectroscopic signatures of the active Fe2III/III-Y122• form
Two quadrupole doublets in Mössbauer
Suggests integer spin ground state 4.2K
53 mT
Spectroscopic signatures of the active Fe2III/III-Y122• form
Spectrum reveals that
Beff = Bext = 6 T
Bint = 0,
S = 0
Bext = 6 T
Spectroscopic signatures of the active Fe2III/III-Y122• form
BUT … how do we pair the lines?
= 0.45 mm/s
DEQ = 2.43 mm/s
= 0.54 mm/s
DEQ = 1.63 mm/s
Spectroscopic signatures of the active Fe2III/III-Y122• form
BUT … how do we pair the lines?
= 0.69 mm/s
DEQ = 1.94 mm/s
= 0.29 mm/s
DEQ = 2.11 mm/s
Spectroscopic signatures of the active Fe2III/III-Y122• form
BUT … how do we pair the lines?
= -0.52 mm/s
DEQ = 0.48 mm/s
= 1.51 mm/s
DEQ = 0.31 mm/s
Site-specific Labeling with 57Fe
Site-specific Labeling with 57Fe
Bollinger, et al. JACS 1997, 5976
Outline • General remarks
• Quadrupole doublet spectra (isomer shift, quadrupole splitting)
• Magnetically split spectra (spin expectation value, hyperfine tensor)
• The correlation between EPR and Mössbauer spectroscopies
(effective g-values and spin expectation values)
• How is the internal field oriented relative to the external field?
• How does the fluctuation rate of the electronic states affect the Mössbauer spectrum?
• Example 1: EPR and Mössbauer of the high-spin Fe(III) center in transferrin
• Example 2: EPR and Mössbauer of the Fe(II)/Fe(III) cluster in myo-inositol oxygenase
(incl. magnetic Mössbauer of dinuclear clusters)
• Example 3: Mössbauer studies of the Fe(III)/Fe(III) cluster E. coli RNR
• Example 4: The high-spin Fe(IV)-oxo intermediate in TauD
• Example 5: A mononuclear Fe-dinitrosyl complex with S = 1/2
• Considerations for sample preparation
Example 4
The Fe(IV)-oxo intermediate in taurine:2-oxoglutarate dioxygenase (TauD)
αKG
His
His
Asp/Glu
Generalized Reaction Catalyzed by the Fe(II)- and
-Ketoglutarate-Dependent Dioxygenases
O
O
OO
O
O
OO
O
CO2O2 - --
-+ + + +HR OHR
αKG
His
His
Asp/Glu
> 3 x 104 M-1s-1 fast
2.5 s-1
fast
fast
fast
1.5 x 105 M-1s-1
kH = 13 s-1
kD=0.25 s-1
Mechanism of Taurine:αKG Dioxygenase (TauD)
Evidence for an Fe(IV) Intermediate by Mössbauer Spectroscopy
= 1.16 mm/s
DEQ = 2.76 mm/s high-spin Fe(II)
Evidence for an Fe(IV) Intermediate by Mössbauer Spectroscopy
= 0.30 mm/s
DEQ = 0.90 mm/s
= 1.16 mm/s
DEQ = 2.76 mm/s
Fe(IV)
Evidence for an Fe(IV) Intermediate (J) by Mössbauer Spectroscopy
0.1 0.2 0.3
Time (s)
J (
mM
)
0.2
0.4
0.6
= 0.30 mm/s
DEQ = 0.90 mm/s
= 1.16 mm/s
DEQ = 2.76 mm/s
TauDFe(II)αKGTaurine
O2
J 2nd Intermediate
1.5 x 105 M-1 s-1
13 s-1
2.5 s-1
Fe(IV) Fe(II)
High-Field Mössbauer of the Fe(IV) Intermediate
0 ms
20 ms
• Magnetic spectra of the Fe(II) reactant complex not well understood
• Experimental spectrum collected under the same experimental conditions is
used without any simulation for deconvolution of data
Mössbauer Evidence that the Intermediate has an Integer Spin Ground State with S = 2
8 T
S = 1
S = 2 I = 3/2
I = 1/2 -1/2
+1/2
+1/2
-1/2
-3/2
+3/2
Further Characterization of J from DFT Calculations
• Comparison of experimentally determined, spectroscopic parameters to
those calculated by DFT methods provides detailed structural information.
(mm/s)
DEQ (mm/s)
0.30 0.27
-0.90 -0.65
exp calc
-18.4
-17.6
-31.0
A/gNN (T)
-22.2
-21.4
-34.4
• resonance Raman Fe=O = 821 cm-1 (Proshlyakov, et al. JACS 2004, 126, 1022)
• EXAFS dFe=O = 1.62 Å
Outline • General remarks
• Quadrupole doublet spectra (isomer shift, quadrupole splitting)
• Magnetically split spectra (spin expectation value, hyperfine tensor)
• The correlation between EPR and Mössbauer spectroscopies
(effective g-values and spin expectation values)
• How is the internal field oriented relative to the external field?
• How does the fluctuation rate of the electronic states affect the Mössbauer spectrum?
• Example 1: EPR and Mössbauer of the high-spin Fe(III) center in transferrin
• Example 2: EPR and Mössbauer of the Fe(II)/Fe(III) cluster in myo-inositol oxygenase
(incl. magnetic Mössbauer of dinuclear clusters)
• Example 3: Mössbauer studies of the Fe(III)/Fe(III) cluster E. coli RNR
• Example 4: The high-spin Fe(IV)-oxo intermediate in TauD
• Example 5: A mononuclear Fe-dinitrosyl complex with S = 1/2
• Considerations for sample preparation
Example 5
A mononuclear {Fe(NO)2}9 complex with S = 1/2
A. L. Speelman, et al., Inorg. Chem. 2016
EPR-Spectroscopy of the {Fe(NO)2}9 complex
• Intense S = 1/2 signal
• S virtually isotropic
• Magnetically split Mössbauer spectra expected
with strong field-orientation dependence
Mössbauer Spectroscopy of the {Fe(NO)2}9 complex
g = 2.0
δ = 0.37 mm/s
ΔEQ = +1.77 mm/s
η = 0.3
A/gnn = (-26.2, -23.4, -4.6) T
A little bit of fine-print for low-field spectra …
A little bit of fine-print for low-field spectra …
• S is isotropic
All directions are probed
• A is very anisotropic
Bint anisotropic
g = 2.0
δ = 0.37 mm/s
ΔEQ = +1.77 mm/s
η = 0.3
A/gnn = (-26.2, -23.4, -4.6) T
A mononuclear {Fe(NO)2}9
complex with S = 1/2
• High-field spectra reveal
that the slow-relaxation
limit applies
Outline • General remarks
• Quadrupole doublet spectra (isomer shift, quadrupole splitting)
• Magnetically split spectra (spin expectation value, hyperfine tensor)
• The correlation between EPR and Mössbauer spectroscopies
(effective g-values and spin expectation values)
• How is the internal field oriented relative to the external field?
• How does the fluctuation rate of the electronic states affect the Mössbauer spectrum?
• Example 1: EPR and Mössbauer of the high-spin Fe(III) center in transferrin
• Example 2: EPR and Mössbauer of the Fe(II)/Fe(III) cluster in myo-inositol oxygenase
(incl. magnetic Mössbauer of dinuclear clusters)
• Example 3: Mössbauer studies of the Fe(III)/Fe(III) cluster E. coli RNR
• Example 4: The high-spin Fe(IV)-oxo intermediate in TauD
• Example 5: A mononuclear Fe-dinitrosyl complex with S = 1/2
• Considerations for sample preparation
Mössbauer spectroscopy – A few final remarks
• “Standard” conditions: ~0.4 mL frozen solution with 1 mM 57Fe
• Natural abundance of 57Fe is 2.2% (you need to enrich with 57Fe, 4-5 $ per mg of 57Fe)
• If you can make samples with 3 mM 57Fe you should do so
• Sample composition matters (purity, number of different species)
• If you have more than one Fe site, think about selective enrichment
• Prepare a parallel EPR sample (in particular if you anticipate species with half-integer S)
• Avoid high concentrations of relatively heavy atoms (Cl, S, P) due to scattering (100 mM
phosphate buffer not a problem, CH2Cl2 solvent is problematic)
• Data collection takes a long time (on average 1 to 1.5 days per spectrum);
longest spectrum (in our lab) was 6 days collection time
longest sample queue (in our lab) was about 5-6 weeks
• $100 per day operation costs for cryogens and source
Acknowledgements