modeling n–h・・・o hydrogen bonding in biological tyrosinate -bound iron centers

1
Modeling N–H ・・・ O Hydrogen Bonding in Biological Tyrosinate-bound Iron Centers INTRODUCTION Future Work: Table 1. Synthesis of 1 (2- Aminophenol). • Finish preparing target complex. • Cyclic Voltammetry to observe redox potentials of complexes. • X-ray diffraction of target complex. Product Percen t Yield (1) 2-Aminophenol 35% (2) 2-(hydroxyphenyl) acetamide (X= CH3) 99% (3) 2-(hydroxyphenyl) trifluoroacetamide (X=CF3) 85% (4) 2-(hydroxyphenyl) trichloroacetamide (CCl3) 75% (5) Tetraphenylphosphonium 99% Proton Source Equivalent s 2-Aminophenol 1,4 Cyclohexadiene 2 0 % yield 1,4 Cyclohexadiene 8 35% yield Iron center proteins are featured in all living organisms and act as oxygen transport systems in molecules. Tyrosine residues represent 3-4 mol % of the residues in the protein environment. These residues are often engaged in intermolecular hydrogen bonding with the protein backbone which make analysis of these residues extremely complicated. However, some tyrosine residues are directly bound to iron centers and will be the focus of this study. The ligands designed in complex 5 display similar electronic and structural features to tyrosine residues in biological systems. Derivatives of complex 5 were synthesized to adjust the electronic structure for comparison. The three ligand sets 2 in scheme 1 (where X = CH3, CCl3, CF3) will be used to compare the effect of intramolecular hydrogen bonding from N-H ・・・ O on the Fe-O bond distances. The oxygen is a hydrogen bond acceptor and will participate with the neighboring hydrogen bonded to the nitrogen in complex 5. Scheme 1. Table 2. Synthesis of various derivatives of 2 Eric Guinto and Dr. Samuel Pazicni Department of Chemistry, University of New Hampshire, Durham, NH A E C D B F Chloroform Chlorofo rm Methanol TMS Figure 1. 1 HNMR spectrum of (1) 2-aminophenol. Figure 3. 1 HNMR spectrum of (2) 2-hydroxyphenyl trifluoroacetamide. Scheme 2. OBJECTIVE ACKNOWLEDGMENTS Ar-H E F To quantitatively compare the three derivatives of complex 5 to determine the Fe-O bond lengths, effect of hydrogen bonding on these bonds, and further understand the nature of tyrosine bound iron centers. I would like to thank Kyle Rodriguez, Stephanie Jones, Christian Tooley, and Dr. Samuel Pazicni for their contributions to this study. DISCUSSION In progress towards complex 5, 2-aminphenol 2 and three acetylated derivatives of 2 were synthesized using a microwave and an acetylation reaction. The reaction of 2-nitrophenol to 2-aminophenol 1 in scheme 1 proceeded with difficulty. Synthesis using an iron catalyst proved to be insufficient for reduction and likely resulted in complexation of the 2- nitrophenol. Due to this road block, a microwave reaction was carried out using Pd/C as the catalyst with two equivalents of 1,4 cyclohexadiene table 1 resulting in a 0% yield. By adjusting the equivalents of the proton source (1,4 cyclohexadiene) from 2 to 8, the molecule 1 was synthesized with a 35% yield (table 1). The 1 HNMR and IR spectra are located in figure 1 and 2 respectively. Continuing the synthesis, 2- aminophenol 1 was acetylated by a specific functionalized anhydride to give 2. These reactions were carried out at room temperature in dichloromethane and allowed to react overnight producing relatively high yields. Specifically, reaction of 2-aminophenol 1 with acetic anhydride resulted in a 99% yield (table 2). The reaction of 1 with trifluoracetic anhydride produced the acetylated product with a 85% yield (table 2). The 1 HNMR spectrum for this product is shown in figure 3. Tetraphenylphosphonium Tetrachloroferrate (III) 4 in scheme 2 was synthesized with a 99% yield (table 2). Characterization of this complex could not be completed and indication of successful synthesis was noted by the instant color change to yellow during the addition of tetraphenylphosphonium chloride scheme 2. Further synthesis is still required for the completion of the target complex 5. Figure 2. IR spectrum of (1) 2- aminophenol. Frantom, P. A.; Seravalli, J.; Ragsdale, S. W.; Fitzpatrick, P. F., Reduction and Oxidation of the Active Site Iron in Tyrosine Hydroxylase: Kinetics and Specificity. Biochemistry 2006, 45 (13), 4338-4338. Pyrz, J. W.; Roe, A. L.; Stern, L. J.; Que, L., Model studies of iron-tyrosinate proteins. Journal of the American Chemical Society 1985, 107 (3), 614-620. Que, L., Jr., Metalloproteins with Phenolate Coordination. Coordination Chemistry Reviews. 1982, 50, 73-108. REFERENCES OH H N CF 3 O A H H H H E C orD D orC B F OH NH 2 A B C D E F OH NO 2 OH NH 2 Methanol 1,4 cyclohexadiene microwave, 120°c, 5 min Pd/C 1 X O X O O OH H N X O X:CF 3 , CCl 3 , CH 3 + DCM, RT, 12hr, N 2 2 OH NH 2 1 OH H N CF 3 O O Na H N CF 3 O FeCl 3 6H 2 O Fe Cl Cl Cl Cl PPh 4 III PPh 4 Cl, EtOH Reflux Fe O O O O HN CX 3 O NH X 3 C O NH X 3 C O HN CX 3 O III PPh 4 X:CF 3 , CCl 3 , CH 3 NaH DMF H 2 O 2 3 4 5 OH NH 2

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Modeling N–H・・・O Hydrogen Bonding in Biological Tyrosinate -bound Iron Centers. Eric Guinto and Dr. Samuel Pazicni Department of Chemistry, University of New Hampshire, Durham, NH. INTRODUCTION. Scheme 2. - PowerPoint PPT Presentation

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Page 1: Modeling N–H・・・O Hydrogen Bonding in Biological  Tyrosinate -bound  Iron  Centers

Modeling N–H ・・・ O Hydrogen Bonding in Biological Tyrosinate-bound Iron Centers

INTRODUCTION

Future Work:

Table 1. Synthesis of 1 (2-Aminophenol).

• Finish preparing target complex.• Cyclic Voltammetry to observe redox potentials of complexes.• X-ray diffraction of target complex.

Product Percent Yield

(1) 2-Aminophenol 35%(2) 2-(hydroxyphenyl) acetamide (X= CH3) 99%(3) 2-(hydroxyphenyl) trifluoroacetamide

(X=CF3) 85%

(4) 2-(hydroxyphenyl) trichloroacetamide (CCl3) 75%

(5) Tetraphenylphosphonium Tetrachloroferrate (III) 99%

Proton Source Equivalents

2-Aminophenol

1,4 Cyclohexadiene 2 0 % yield

1,4 Cyclohexadiene 8 35% yield

Iron center proteins are featured in all living organisms and act as oxygen transport systems in molecules. Tyrosine residues represent 3-4 mol % of the residues in the protein environment. These residues are often engaged in intermolecular hydrogen bonding with the protein backbone which make analysis of these residues extremely complicated. However, some tyrosine residues are directly bound to iron centers and will be the focus of this study. The ligands designed in complex 5 display similar electronic and structural features to tyrosine residues in biological systems. Derivatives of complex 5 were synthesized to adjust the electronic structure for comparison. The three ligand sets 2 in scheme 1 (where X = CH3, CCl3, CF3) will be used to compare the effect of intramolecular hydrogen bonding from N-H ・ ・ ・ O on the Fe-O bond distances. The oxygen is a hydrogen bond acceptor and will participate with the neighboring hydrogen bonded to the nitrogen in complex 5.

Scheme 1.

Table 2. Synthesis of various derivatives of 2

Eric Guinto and Dr. Samuel PazicniDepartment of Chemistry, University of New Hampshire, Durham, NH

OH

HN CF3

O

A

H

H

H

H

EC or D

D or C

BF

A

E C D BF

Chloroform

Chloroform

Methanol

TMSOH

NH2A

B

C

D

E

F

Figure 1. 1HNMR spectrum of (1) 2-aminophenol.

Figure 3. 1HNMR spectrum of (2) 2-hydroxyphenyl trifluoroacetamide.

OH

NO2

OH

NH2Methanol1,4 cyclohexadiene

microwave, 120°c, 5 minPd/C

1

X O X

O O

OHHN X

O

X: CF3, CCl3, CH3

+ DCM, RT,12 hr, N2

2

OH

NH2

1

OHHN CF3

O

O NaHN CF3

O

FeCl3 6H2OFe

Cl

Cl

Cl

ClPPh4

IIIPPh4Cl, EtOHReflux

FeO

O O

O

HN

CX3O

NHX3C

O

NH

X3C O

HN CX3

OIII

PPh4

X: CF3, CCl3, CH3

NaHDMF

H2O2 3

4

5

Scheme 2.

OBJECTIVE

ACKNOWLEDGMENTS

Ar-H

E F

To quantitatively compare the three derivatives of complex 5 to determine the Fe-O bond lengths, effect of hydrogen bonding on these bonds, and further understand the nature of tyrosine bound iron centers.

I would like to thank Kyle Rodriguez, Stephanie Jones, Christian Tooley, and Dr. Samuel Pazicni for their contributions to this study.

DISCUSSION In progress towards complex 5, 2-aminphenol 2 and three acetylated derivatives of 2 were synthesized using a microwave and an acetylation reaction. The reaction of 2-nitrophenol to 2-aminophenol 1 in scheme 1 proceeded with difficulty. Synthesis using an iron catalyst proved to be insufficient for reduction and likely resulted in complexation of the 2-nitrophenol. Due to this road block, a microwave reaction was carried out using Pd/C as the catalyst with two equivalents of 1,4 cyclohexadiene table 1 resulting in a 0% yield. By adjusting the equivalents of the proton source (1,4 cyclohexadiene) from 2 to 8, the molecule 1 was synthesized with a 35% yield (table 1). The 1HNMR and IR spectra are located in figure 1 and 2 respectively. Continuing the synthesis, 2-aminophenol 1 was acetylated by a specific functionalized anhydride to give 2. These reactions were carried out at room temperature in dichloromethane and allowed to react overnight producing relatively high yields. Specifically, reaction of 2-aminophenol 1 with acetic anhydride resulted in a 99% yield (table 2). The reaction of 1 with trifluoracetic anhydride produced the acetylated product with a 85% yield (table 2). The 1HNMR spectrum for this product is shown in figure 3. Tetraphenylphosphonium Tetrachloroferrate (III) 4 in scheme 2 was synthesized with a 99% yield (table 2). Characterization of this complex could not be completed and indication of successful synthesis was noted by the instant color change to yellow during the addition of tetraphenylphosphonium chloride scheme 2. Further synthesis is still required for the completion of the target complex 5.

Figure 2. IR spectrum of (1) 2-aminophenol.

Frantom, P. A.; Seravalli, J.; Ragsdale, S. W.; Fitzpatrick, P. F., Reduction and Oxidation of the Active Site Iron in Tyrosine Hydroxylase:  Kinetics and Specificity. Biochemistry 2006, 45 (13), 4338-4338.Pyrz, J. W.; Roe, A. L.; Stern, L. J.; Que, L., Model studies of iron-tyrosinate proteins. Journal of the American Chemical Society 1985, 107 (3), 614-620.Que, L., Jr., Metalloproteins with Phenolate Coordination. Coordination Chemistry Reviews. 1982, 50, 73-108.

REFERENCES

OH

NH2