metals in medicine / biology a/p matthew wilce uwa structural biology computational biology

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Metals in Medicine / Biology A/P Matthew Wilce UWA Structural Biology Computational Biology

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Page 1: Metals in Medicine / Biology A/P Matthew Wilce UWA Structural Biology Computational Biology

Metals in Medicine / Biology

A/P Matthew Wilce

UWA

Structural Biology

Computational Biology

Page 2: Metals in Medicine / Biology A/P Matthew Wilce UWA Structural Biology Computational Biology

Molecular Tools• Crystallography.• NMR.• Mass Spec. Sequencing, proteomics…• Circular Dichroism.• Surface Plasmon Resonance.• Synthesis of drug delivery systems. • Molecular Simulations (using highly parallel software).• in silico drug screening.• Molecular Biology/Protein Chemistry/Biochemistry/Chemistry• …

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Page 3: Metals in Medicine / Biology A/P Matthew Wilce UWA Structural Biology Computational Biology

Plastocyanin

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Page 4: Metals in Medicine / Biology A/P Matthew Wilce UWA Structural Biology Computational Biology

Plastocyanin• 'blue' copper protein plastocyanin

• from the cyanobacterium Phormidium laminosum

• refined using 2.8 Å X-ray data.

• Plants use light energy to drive electron and proton transport across the thylakoid membrane.

• Leads to the synthesis of NADPH and ATP utilizing photosystem I (PSI)1 and II

• (PSII), cytochrome b6/f, and the plastid ATPase, Plastocyanin

• transfers electrons from cytochrome b6/f to PSI (1)

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Page 5: Metals in Medicine / Biology A/P Matthew Wilce UWA Structural Biology Computational Biology

Auracyanin - Chloroflexus aurantiacus • Electron transport

• photosynthesis

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Cu

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Page 6: Metals in Medicine / Biology A/P Matthew Wilce UWA Structural Biology Computational Biology

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Page 7: Metals in Medicine / Biology A/P Matthew Wilce UWA Structural Biology Computational Biology

Ultra Hi-Resolution Macromolecular Crystallography

• Haloalkane dehalogenase• 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase

• Pseudomonas paucimobilis (Sphingomonas paucimobilis)  

• Molecular weight 35kDa, 302 amino acids.• 0.95Å resolution x-ray diffraction data• Using synchrotron radiation at the

Advanced Photon Source, IL.

Page 8: Metals in Medicine / Biology A/P Matthew Wilce UWA Structural Biology Computational Biology

Ultra Hi-Resolution Haloalkane dehalogenase

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Page 9: Metals in Medicine / Biology A/P Matthew Wilce UWA Structural Biology Computational Biology

Ultra Hi-Resolution Haloalkane dehalogenase

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Page 10: Metals in Medicine / Biology A/P Matthew Wilce UWA Structural Biology Computational Biology

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in silico estimation of G of interaction RNA-protein complexes

Poly cytosine RNA

protein

Page 11: Metals in Medicine / Biology A/P Matthew Wilce UWA Structural Biology Computational Biology

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Page 12: Metals in Medicine / Biology A/P Matthew Wilce UWA Structural Biology Computational Biology

Mechanosensitive Channel - MscL

• Protects bacteria from osmotic downshock

• A transmembrane channel that opens to relieve osmotic pressure

• Gd is known to close the channel

Page 13: Metals in Medicine / Biology A/P Matthew Wilce UWA Structural Biology Computational Biology

Engineering ion transport channels

•Could we in the future use modern molecular biological tools transiently transfect targetted cells (eg cancer or other disease) to produce selected ion channels that increase the uptake of cytotoxic metals ?? Mercury ??