mendelian genetics introduction to biology. 12/4 warm-up you will need 2 half sheets of paper. 1.on...
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Mendelian Genetics
Introduction to Biology
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12/4 Warm-up You will need 2 half sheets of paper.
1. On your own, you will create 5 quiz questions about Meiosis. They can be multiple choice or fill in the blank questions.
2. On the other sheet of paper, you will write out your answer key.
3. After 15 minutes, we will switch quiz questions with a classmate, and you will take each others’ quizzes.
4. Hand quizzes back; you grade your partner’s quiz, and hand it back to him/her.
5. All quizzes will be handed in.
25 minutes total to finish all this.
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Mendelian genetics video
• https://www.youtube.com/watch?v=NWqgZUnJdAY
• Record at least 10 facts in your notes. You will use these notes to study for the exam
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Gregor Mendel• Gregor Mendel discovered the basic
principles of heredity by breeding garden peas in carefully planned experiments
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Mendel’s Experimental,
Quantitative Approach• Advantages of pea plants for genetic study:
o There are many varieties with distinct heritable features. (flower color, seed color, etc)
o Each pea plant has sperm-producing organs (stamens) and egg-producing organs (carpels)
o Cross-pollination can be achieved by dusting one plant with pollen from another
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LE 14-2
Removed stamensfrom purple flower
Transferred sperm-bearing pollen fromstamens of whiteflower to egg-bearing carpel ofpurple flower
Carpel Stamens
Parentalgeneration(P)
Pollinated carpelmatured into pod
Planted seedsfrom pod
Examinedoffspring:all purpleflowers
Firstgenerationoffspring(F1)
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• Mendel chose to track only those characters that varied in an “either-or” manner.o Two varieties of a trait, such as wrinkled or smooth seeds.
• He also used varieties that were “true-breeding” (plants that produce offspring of the same variety when they self-pollinate)o For example, a plant with white flowers that only produces
white flowered offspring.
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• In a typical experiment, Mendel mated two contrasting, true-breeding varieties, a process called hybridization.
• The true-breeding parents are the P generation.
• The hybrid offspring of the P generation are called the F1 generation.
• When F1 individuals self-pollinate, the F2 generation is produced.
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The Law of Segregation
• When Mendel crossed contrasting, true-breeding white and purple flowered pea plants, all of the F1 hybrids were purple
• When Mendel crossed the F1 hybrids, about 75% of the generation had purple flowers, 25% had white flowers.
• Why did the white flower color disappear from the first generation, then re-appear during the second?
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LE 14-3
P Generation
(true-breedingparents)
F1 Generation
(hybrids)
F2 Generation
Purpleflowers
Whiteflowers
All plants hadpurple flowers
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• Mendel called the purple flower color a dominant trait and white flower color a recessive trait.
• Mendel observed the same pattern of inheritance in six other pea plant characters, each represented by two traits
• These traits were all controlled by individual genes, which are segments of DNA within different chromosomes.
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Mendel’s Model• Mendel developed a hypothesis to explain the 3:1
inheritance pattern he observed in F2 offspring
• Four related concepts make up this model• These concepts can be related to what we now
know about genes and chromosomes
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• Mendel’s First Concept is that alternative versions of genes account for variations in inherited characteristics.o For example, the gene for flower color in pea plants exists in two
versions, one for purple flowers and the other for white flowers
• These alternative versions of a gene are now called alleles
• Each gene resides at a specific locus on a specific chromosome
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• Mendel’s second concept is that for each characteristic, an organism inherits two alleles: one from each parent.o Mendel made this deduction without knowing
about the role of chromosomes
• The two alleles can be identical, such as with a true-breeding pea plant.
• The two alleles can also differ, such as in a hybrid.
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• Mendel’s third concept is that if the two alleles at a locus differ, the dominant allele will be expressed, the recessive allele will be hidden.
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• Mendel’s fourth concept states that an egg or a sperm gets only one of the two alleles that are present in the somatic cells of an organism.o This is now called independent assortment.
• This is caused by the independent assortment of homologous chromosomes to different daughter cells during meiosis.
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• The possible combinations of sperm and egg can be shown using a Punnett square, a diagram for predicting the results of a genetic cross between individuals of known genetic makeup
• Each gene is represented by a pair of letters.o A capital letter represents a dominant alleleo A lowercase letter represents a recessive allele.
• Example: o Upper case P represents a purple alleleo p represents a white allele
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LE 14-5_2
Appearance:
P Generation
Genetic makeup:
Gametes
F1 Generation
Appearance:Genetic makeup:
Gametes:
F2 Generation
Purple flowersPp
P p1 21 2
P p
F1 sperm
F1 eggsPP Pp
Pp pp
P
p
3 : 1
Purpleflowers
PP
Whiteflowers
pp
P p
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Useful Genetic Vocabulary
• An organism with two identical alleles for a character is said to be homozygous for the gene controlling that character.
• An organism that has two different alleles for a gene is said to be heterozygous for the gene controlling that character.
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• Because of the different effects of dominant and recessive alleles, different allele combinations can produce the same characteristics.o PP = Purpleo Pp = Purpleo pp = white
• Phenotype is the organism’s physical appearance, genotype is the organism’s alleles.
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LE 14-6Phenotype
Purple
Purple3
Purple
Genotype
PP(homozygous
Pp(heterozygous
Pp(heterozygous
pp(homozygous
1
2
1
Ratio 1:2:1
White
Ratio 3:1
1
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The Testcross• How can we tell the genotype of an
individual with the dominant phenotype?o The individual could be either homozygous dominant or
heterozygous.
• The answer is to carry out a testcross: breeding the mystery individual with a homozygous recessive individualo If any offspring display the recessive phenotype, the
mystery parent must be heterozygous.
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LE 14-7
Dominant phenotype,unknown genotype:
PP or Pp?
If PP,then all offspring
purple:
p p
P
P
Pp Pp
Pp Pp
If Pp,then 1
2 offspring purpleand 1
2 offspring white:
p p
P
Ppp pp
Pp Pp
Recessive phenotype,known genotype:
pp
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Q1: A cross between homozygous purple-
flowered and homozygous white-flowered
pea plants results in offspring with purple
flowers. This demonstrates
a) the blending model of genetics.
b) true-breeding.
c) dominance.
d) a dihybrid cross.
e) the mistakes made by Mendel.
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Q1: A cross between homozygous purple-
flowered and homozygous white-flowered
pea plants results in offspring with purple
flowers. This demonstrates
a) the blending model of genetics.
b) true-breeding.
c) dominance.
d) a dihybrid cross.
e) the mistakes made by Mendel.
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The Law of Independent Assortment
• The Law of Segregation states that each individual will randomly pass along only one of its two alleles for a trait to its offspring.o A pea plant that is Pp has a 50% chance of passing the P
allele, and a 50% change of passing the p allele.
• Mendel derived the law of segregation by breeding pea plants that were hybrids of one characteristic.o These are called monohybrid crosses.
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Q2: Imagine a family with two parents who both maintain low fat levels through a combination of aerobic activity and weight training. Which of the
following statements is/are most likely to apply to their two children?
a) The parents’ fat levels are irrelevant to the fat levels of the children.b) One child is likely to have low fat levels but the other is more likely to have high fat levels because of independent assortment of genes.c) The children may not have the same fat levels as their parents because genes independently assort during meiosis.
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Q2: Imagine a family with two parents who both maintain low fat levels through a combination of aerobic activity and weight training. Which of the
following statements is/are most likely to apply to their two children?
a) The parents’ fat levels are irrelevant to the fat levels of the children.b) One child is likely to have low fat levels but the other is more likely to have high fat levels because of independent assortment of genes.c) The children may not have the same fat levels as their parents because genes independently assort during meiosis.
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• Mendel then took two parents that were true-breeding for two characteristics and crossed them to create offspring that were heterozygous hybrids for each trait.o Example: PpWw = Purple flower, wrinkled seeds
• He then performed a dihybrid cross, where two hybrids were bred together.
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LE 14-8P Generation
F1 Generation
YYRR
Gametes YR yr
yyrr
YyRr
Hypothesis ofdependentassortment
Hypothesis of independent assortment
SpermEggs
YR
Yr
yrYR
YR
yr
Eggs
YYRR YyRr
YyRr yyrr yR
yrPhenotypic ratio 3:1
F2 Generation(predictedoffspring)
YYRR YYRr YyRR YyRr
YYRr YYrr YyRr Yyrr
YyRR YyRr yyRR yyRr
YyRr Yyrr yyRr yyrr
Phenotypic ratio 9:3:3:1
YR Yr yR yr
Sperm
12
14
14
14
14
14
34
12
12
12
14
916
316
316
316
14
14
14
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• Using a dihybrid cross, Mendel developed the law of independent assortmento This law states that each pair of alleles segregates
independently of other pairs of alleles during meiosis.
• Strictly speaking, this law applies only to genes on different, nonhomologous chromosomes.
• Genes located near each other on the same chromosome tend to be inherited together
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Q3: Independent Assortment
Imagine crossing a pea heterozygous at the loci for flower color (white versus purple) and seed color (yellow versus
green) with a second pea homozygous for flower color (white) and seed color (yellow). What types of gametes will the first
pea produce?
a) two gamete types: white/white and purple/purpleb) two gamete types: white/yellow and purple/greenc) four gamete types: white/yellow, white/green, purple/yellow, purple/greend) four gamete types: white/purple, yellow/green,white/white, and purple/purplee) one gamete type: white/purple/yellow/green
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Q3: Independent Assortment
Imagine crossing a pea heterozygous at the loci for flower color (white versus purple) and seed color (yellow versus
green) with a second pea homozygous for flower color (white) and seed color (yellow). What types of gametes will the first
pea produce?
a) two gamete types: white/white and purple/purpleb) two gamete types: white/yellow and purple/greenc) four gamete types: white/yellow, white/green, purple/yellow, purple/greend) four gamete types: white/purple, yellow/green,white/white, and purple/purplee) one gamete type: white/purple/yellow/green
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Probability• Mendel’s laws of segregation and independent
assortment reflect the rules of probability• When tossing a coin, the outcome of one toss
has no impact on the outcome of the next tosso Odds of getting tails on first coin flip:
½ or 50%o Odds of getting tails on fifth coin flip after getting tails 4 times
in a row:½ or 50%
• The random assort alleles of each gene follow the same rules.
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Multiplication Rule
• Multiplication Rule: The odds of two events occurring in a row can be calculated by multiplying their probabilities together.o Odds of hitting tails twice in a row = ½ x ½ = ¼
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Addition Rule• Addition Rule: The odds of getting a
combination of events to occur can be calculated by adding their probabilities together.o If you flip two coins, your probabilities are…
• ¼ Heads + heads
• ¼ Heads + tails
• ¼ Tails + heads
• ¼ Tails + tails
= ½ or 50% odds of getting a combination of heads and tails
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LE 14-9
Segregation ofalleles into eggs
Rr
Sperm
R r
R
rR
R
R
r
Eggs
r
R
r
r
Segregation ofalleles into sperm
Rr
12
12
14
14
14
14
12
12
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Imagine a locus with four different alleles for fur color in an animal. The alleles are named Da, Db,
Dc, and Dd. If you crossed two heterozygotes, DaDb and DcDd, what genotype proportions would
you expect in the offspring?
a) 25% DaDc, 25% DaDd, 25% DbDc, 25% DbDd
b) 50% DaDb, 50% DcDd
c) 25% DaDa, 25% DbDb, 25% DcDc, 25% DdDdDcDd
d) 50% DaDc, 50% DbDd
e) 25% DaDb, 25% DcDd, 25% DcDc, 25% DdDd
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Imagine a locus with four different alleles for fur color in an animal. The alleles are named Da, Db,
Dc, and Dd. If you crossed two heterozygotes, DaDb and DcDd, what genotype proportions would
you expect in the offspring?
a) 25% DaDc, 25% DaDd, 25% DbDc, 25% DbDd
b) 50% DaDb, 50% DcDd
c) 25% DaDa, 25% DbDb, 25% DcDc, 25% DdDdDcDd
d) 50% DaDc, 50% DbDd
e) 25% DaDb, 25% DcDd, 25% DcDc, 25% DdDd
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Other Inheritance Patterns
• The relationship between genotype and phenotype is rarely as simple as in the pea plant characters Mendel studied
• Many heritable characters are not determined by only one gene with two alleles
• However, the basic principles of segregation and independent assortment apply even to more complex patterns of inheritance
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Extending Mendelian Genetics for a Single
Gene• Inheritance of characters by a single gene
may deviate from simple Mendelian patterns in the following situations:o When alleles are not completely dominant or recessiveo When a gene has more than two alleleso When a gene produces multiple phenotypes
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The Spectrum of Dominance
• Complete dominance occurs when phenotypes of the heterozygote and dominant homozygote are identicalo Example: PP and Pp both produce purple flowers in pea
plants.
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Codominance• In codominance, both alleles are dominant
and have different effects.o Example: Human blood types
• The letters A and B represent different carbohydrate markers present on red blood cells
• Type A only has “A” markers, Type AB has both markers, etc.
• Type O represents the absence of any markers.
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• This is also an example of multiple alleles because there are more than two variations on the trait.
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Incomplete Dominance• In incomplete dominance, neither allele is
dominant, and the hybrid phenotype is a mixture of the two parents.o Example: Geranium color is controlled by a
single gene.• RR = Red• WW = White• RW = Pink
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LE 14-10
RedCRCR
Gametes
P Generation
CR CW
WhiteCWCW
PinkCRCW
CRGametes CW
F1 Generation
F2 Generation EggsCR CW
CR
CRCR CRCW
CRCW CWCW
CW
Sperm
12
12
12
12
12
12
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Q4: Albinism in humans occurs when both alleles at a locus produce
defective enzymes in the biochemical pathway leading to melanin. Given
that heterozygotes are normally pigmented, which of the following
statements is/are correct?
a) One normal allele produces as much melanin as two normal alleles.
b) Each defective allele produces a little bit of melanin.
c) Two normal alleles are needed for normal melanin production.
d) The two alleles are codominant.
e) The amount of sunlight will not affect skin color of heterozygotes.
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Q4: Albinism in humans occurs when both alleles at a locus produce
defective enzymes in the biochemical pathway leading to melanin. Given
that heterozygotes are normally pigmented, which of the following
statements is/are correct?
a) One normal allele produces as much melanin as two normal alleles.
b) Each defective allele produces a little bit of melanin.
c) Two normal alleles are needed for normal melanin production.
d) The two alleles are codominant.
e) The amount of sunlight will not affect skin color of heterozygotes.
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Q5: Imagine that the last step in a biochemical pathway to the red skin pigment of an apple is catalyzed by enzyme X, which changes compound C to compound D. If an effective enzyme is present, compound D is formed and the apple skin is red. However, if the enzyme is not effective, only compound C is present and the skin is yellow. Thinking about enzyme action, what can you accurately say about a heterozygote with one allele for an effective enzyme X and one allele for an ineffective enzyme X?
a) The phenotype will probably be yellow but cannot be red.b) The phenotype will probably be red but cannot be yellow.c) The phenotype will be a yellowish red.d) The phenotype will be either yellow or red.e) The phenotype will be either yellowish red or red.
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Q5: Imagine that the last step in a biochemical pathway to the red skin pigment of an apple is catalyzed by enzyme X, which changes compound C to compound D. If an effective enzyme is present, compound D is formed and the apple skin is red. However, if the enzyme is not effective, only compound C is present and the skin is yellow. Thinking about enzyme action, what can you accurately say about a heterozygote with one allele for an effective enzyme X and one allele for an ineffective enzyme X?
a) The phenotype will probably be yellow but cannot be red.b) The phenotype will probably be red but cannot be yellow.c) The phenotype will be a yellowish red.d) The phenotype will be either yellow or red.e) The phenotype will be either yellowish red or red.
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Frequency of Dominant Alleles
• Dominant alleles are not necessarily more common.
• In this example, the recessive allele is far more prevalent than the dominant allele in the population.o For example, one baby out of 400 in the United
States is born with extra fingers or toeso The gene that controls this trait is dominant,
yet, it is rare.
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• Baby born in Brooklyn with an extra finger; inherited from his father.
Picture from NY Daily News, Aug 29, 2007
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Pleiotropy• Most genes have multiple phenotypic
effects, a property called pleiotropy • For example, pleiotropic alleles are
responsible for the multiple symptoms of certain hereditary diseases, such as cystic fibrosis and sickle-cell disease
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Epistasis• In epistasis, a gene at one locus alters the
phenotypic expression of a gene at a second locuso For example, in mice and many other mammals, coat color
depends on two geneso One gene determines the pigment coloro The other gene determines whether the pigment will
actually be deposited in the hair
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Sperm
BC bC Bc bc
BbCcBBCcBbCCBBCC
BbCC bbCC BbCc bbCc
BbccBBccBbCcBBCc
BbCc bbCc Bbcc bbcc
BC
bC
Bc
bc
BbCc BbCc
14
14
14
14
14
14
14
14
916
316
416
Coat color?B = Blackb = Brown
Pigment deposited in hair?
C = Yes, colored fur
c = no, no color
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Polygenic Inheritance• Quantitative characteristics are those that have an entire spectrum of variation.• Examples: Skin color, height
• This is caused by polygenic inheritance, when two or more genes affect the same trait.
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LE 14-12
aabbcc Aabbcc AaBbcc AaBbCc AABbCc AABBCc AABBCC
AaBbCcAaBbCc
20/64
15/64
6/64
1/64
Fra
ctio
n o
f p
rog
eny
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Environmental Impacts on Phenotype
• Another departure from Mendelian genetics arises when the phenotype for a character depends on environment as well as genotype
• For example, hydrangea flowers of the same genotype range from blue-violet to pink, depending on soil acidity
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Human Mendelian Traits
• Humans are not good subjects for genetic research because generation time is too long; parents produce relatively few offspring; and breeding experiments are unacceptable
• However, basic Mendelian genetics endures as the foundation of human genetics
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Pedigree Analysis• A pedigree is a family tree that describes the
interrelationships of parents and children across generations
• Inheritance patterns of particular traits can be traced and described using pedigrees
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LE 14-14a
Ww ww ww Ww
Ww wwWwwwwwWw
WW wwor
Ww
No widow’s peak
Thirdgeneration
(two sisters)
Widow’s peak
Second generation(parents plus aunts
and uncles)
First generation(grandparents)
Dominant trait (widow’s peak)
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LE 14-14b
First generation(grandparents) Ff Ff
FF or Ff ff ff Ff Ff
ff
ff
Ff
Second generation(parents plus aunts
and uncles)
Thirdgeneration
(two sisters)
Attached earlobe Free earlobe
ff FForFf
Recessive trait (attached earlobe)
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• Pedigrees can also be used to make predictions about future offspring
• We can use the multiplication and addition rules to predict the probability of specific phenotypes
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Recessively Inherited Disorders
• Many genetic disorders are inherited in a recessive manner
• Recessively inherited disorders show up only in individuals homozygous for the allele
• Carriers are heterozygous individuals who carry the recessive allele but are phenotypically normal
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Cystic Fibrosis• Cystic fibrosis is the most common lethal
genetic disease in the United States, striking one out of every 2,500 people of European descent
• The cystic fibrosis allele results in a defective protein transport channel in cell membranes.o Controls transportation of Cl- ions.
• Symptoms include mucus buildup in some internal organs and abnormal absorption of nutrients in the small intestine
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Sickle-Cell Disease• Sickle-cell disease affects one out of 400
African-Americans.• The gene for Sickle-cell disease is recessive.• A homozygous recessive individual will have
a substitution of a single amino acid in the hemoglobin protein in red blood cells.o This causes the red blood cells to be misshapen.o Symptoms include physical weakness, pain, organ
damage, and even paralysis
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Mating of Close Relatives
• Most genetic defects and disorders are caused by recessive genes.
• The likeliness of a child inheriting one of these disorders increases when inbreeding occurs.
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Envision a family in which the grandfather, age 47, has just been diagnosed with Huntington’s
disease. His daughter, age 25, now has a 2-year-old baby boy. No one else in the family has the
disease. What is the probability that the daughter will contract the disease?
a) 0%
b) 25%
c) 50%
d) 75%
e) 100%
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Envision a family in which the grandfather, age 47, has just been diagnosed with Huntington’s
disease. His daughter, age 25, now has a 2-year-old baby boy. No one else in the family has the
disease. What is the probability that the daughter will contract the disease?
a) 0%
b) 25%
c) 50%
d) 75%
e) 100%
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Review the family described in the previous
question. What is the probability that the
baby will contract the disease?
a) 0%
b) 25%
c) 50%
d) 75%
e) 100%
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Review the family described in the previous
question. What is the probability that the
baby will contract the disease?
a) 0%
b) 25%
c) 50%
d) 75%
e) 100%