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Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples after ProteoMiner treatment Supplementary table 2 Number of protein spots from fractionated plasma samples Supplementary table 3 Number of protein spots between the ProteoMiner-treated and untreated protein samples with different criteria Supplementary table 4 Number of protein spots observed by mass spectrometric protein identification Supplementary table 5 List of proteins identified by mass spectrometry Supplementary table 6 Detailed data of identified proteins Supplementary table 7

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Page 1: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

Legends for supplementary tables and figures

Supplementary table 1

Recovery rate of protein samples after ProteoMiner treatment

Supplementary table 2

Number of protein spots from fractionated plasma samples

Supplementary table 3

Number of protein spots between the ProteoMiner-treated and untreated protein samples with different

criteria

Supplementary table 4

Number of protein spots observed by mass spectrometric protein identification

Supplementary table 5

List of proteins identified by mass spectrometry

Supplementary table 6

Detailed data of identified proteins

Supplementary table 7

Page 2: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

List of the identified proteins and their reported concentrations and references

Supplementary figure 1

Reproducibility of protein fractionation by liquid chromatography. The ultraviolet detection (280 nm) trace

for each run demonstrated consistent separation and fractionation. A. HiTrap Blue HP column ; B. HiTrap

Protein G HP column ; C. Resource Q column.

Supplementary figure 2

Two-dimensional difference gel electrophoresis images of ProteoMiner-treated and untreated protein

samples. The ProteoMiner-treated and untreated samples were labeled with Cy5 and Cy3, respectively. A.

original plasma; B. flow-through fraction of HiTrap Blue HP column; C. binding fraction of

HiTrap Blue HP column; D. flow-through fraction of HiTrap Protein G HP column; E. binding

fraction of HiTrap Protein G HP column; 0 mM fraction (F), 100 mM fraction (G), 150 mM (H),

200 mM (I), 250 mM (J), and 1 M fraction (K) of Resource Q column.

Page 3: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

Supplementary table 1 Recovery rate of protein samples after ProteoMiner treatment

samples subjected samples purified

to ProteoMiner by ProteoMiner

fractions concentration amount concentration amount recovery rate

(μg/μl) (mg) (μg/μl) (mg) (%)

plasma 61.80 61.80 6.08 1.22 1.97

Blue FT 169.66 169.66 7.27 1.45 0.86

Blue BD 250.60 250.60 16.77 3.35 1.34

ProG FT 57.96 57.96 8.31 1.66 2.87

ProG BD 96.12 19.22 10.57 0.42 2.20

0 mM NaCl elute 56.54 11.31 4.52 0.18 1.60

100 mM NaCl elute 83.48 16.70 3.92 0.16 0.94

150 mM NaCl elute 109.70 21.94 3.15 0.13 0.57

200 mM NaCl elute 116.90 23.38 3.73 0.15 0.64

250 mM NaCl elute 20.50 4.10 4.91 0.20 4.80

1 M NaCl elute 19.60 3.92 6.20 0.25 6.33

Page 4: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

Supplementary table 2 Number of protein spots from fractionated plasma samples

fractions number of protein spots number of protein spots

with ProteoMiner treatment without ProteoMiner treatment

plasma 697 538

Blue FT 878 698

Blue BD 786 725

Protein G FT 877 667

Protein G BD 288 284

0 mM NaCl elute 668 445

100 mM NaCl elute 556 431

150 mM NaCl elute 578 550

200 mM NaCl elute 738 598

250 mM NaCl elute 1014 670

1 M NaCl elute 950 784

total 8030 6390

Page 5: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples
Page 6: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

Supplementary table 4 Number of protein spots observed by mass spectrometric protein identification

fractions A1) B2)

plasma 8/153) 8/8

Blue FT 8/21 8/13

Blue BD 5/9 10/12

ProG FT 10/18 13/15

ProG BD -/- -/-

0 mM 3/6 9/10

100 mM 5/10 6/7

150 mM 4/7 7/8

200 mM 5/7 7/8

250 mM 2/8 4/7

1 M 3/7 3/4

subtotal 53/108 75/92

total 128/200

1)A: Protein spots with increased intensity by ProteoMiner treatment. 2)B: Protein spots with decreased intensity by ProteoMiner treatment. 3) Protein spots with positive identification by massspectrometry / protein spots examined by mass spectrometry.

Page 7: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

Supplementary table 5 List of proteins identified by mass spectrometry

plasma

spot number 1) accession

protein name 2) number of sequence MASCOT fold

number 2) matched peptides coverage (%) 3) score 4) difference 5)

1250 P04004 vitronectin 3 9.0 182 16.5

1266 P04004 vitronectin 2 6.5 127 20.1

1291 P04004 vitronectin 3 9.0 220 21.4

1322 P04004 vitronectin 2 5.6 117 17.7

2003 P0C0L4 complement C4-A 2 1.2 118 71.0

2664 P02768 albumin 28 41.4 1546 0.026

2670 P02768 albumin 24 37.8 1310 0.024

2703 P02768 albumin 28 40.2 1521 0.024

2715 P02768 albumin 22 36.8 1096 0.029

2923 P02768 albumin 24 38.6 1278 0.020

2936 P02768 albumin 20 33.7 1045 0.021

2937 P02768 albumin 24 38.6 1267 0.019

2938 P02768 albumin 5 10.8 259 0.023

2962 P04004 vitronectin 3 9.0 195 47.5

2963 P04004 vitronectin 3 9.0 172 52.9

2970 P01024 complement C3 13 10.4 627 20.0

Blue FT

spot number accession

protein name number of sequence MASCOT fold

number matched peptides coverage (%) score difference

775 P06727 apolipoprotein A-IV 5 15.7 237 36.4

792 P10909 clusterin 2 8.9 118 27.9

813 P27169 paraoxonase/arylesterase 1 6 24.5 347 25.5

1416 P02787 serotransferrin 11 21.2 696 0.034

1627 P00734 prothrombin 6 11.7 367 39.2

1732 P00734 prothrombin 6 11.7 326 24.3

1744 P02768 albumin 16 23.8 621 0.031

1748 P01009 alpha-1-antitrypsin 5 19.9 229 44.5

1859 P02647 apolipoprotein A-I 5 20.2 290 39.2

1893 P02787 serotransferrin 9 14.6 534 0.026

1894 P02787 serotransferrin 13 22.6 850 0.027

1895 P0C0L4 complement C4-A 2 2.0 97 44.5

1920 P02787 serotransferrin 11 16.2 661 0.021

1960 P00738 haptoglobin 12 20.9 606 0.017

2006 P00738 haptoglobin 8 16.5 426 0.028

2078 P00739 haptoglobin-related protein 2 6.3 124 0.015

Blue BD

spot number accession protein name number of sequence MASCOT fold

Page 8: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

number matched peptides coverage (%) score difference

275 P02768 albumin 8 13.8 413 0.015

440 P02768 albumin 4 9.0 153 0.016

586 P02675 fibrinogen beta chain 16 43.2 1009 24.8

1498 P02768 albumin 18 24.6 960 0.004

1499 P02768 albumin 25 38.8 1354 0.007

1503 P02768 albumin 19 30.4 772 0.014

1511 P02768 albumin 22 28.4 1142 0.005

1514 P02768 albumin 21 25.8 1112 0.004

1519 P02768 albumin 26 29.4 1233 0.003

1520 P02768 albumin 7 12.3 430 0.007

1784 P02679 fibrinogen gamma chain 19 47.7 1164 22.3

1832 P02679 fibrinogen gamma chain 19 47.9 1078 21.4

1840 P02679 fibrinogen gamma chain 19 45.5 1109 19.0

1841 P02675 fibrinogen beta chain 15 40.7 952 19.1

1852 P02768 albumin 10 16.6 590 0.016

ProG FT

spot number accession

protein name number of sequence MASCOT fold

number matched peptides coverage (%) score difference

240 P01023 alpha-2-macroglobulin 31 28.1 1890 0.029

303 P00450 ceruloplasmin 27 36.2 1538 0.027

564 P02768 albumin 12 18.4 647 0.027

569 P02768 albumin 13 18.1 721 0.026

1084 Q15485 ficolin-2 3 10.2 195 24.4

1255 P27169 paraoxonase/arylesterase 1 5 18.3 283 45.3

1272 P00734 prothrombin 2 3.5 131 16.5

1284 P27169 paraoxonase/arylesterase 1 5 18.3 270 18.5

1285 P27169 paraoxonase/arylesterase 1 5 18.3 280 21.9

1319 P02649 apolipoprotein E 7 28.7 485 16.5

1914 P02647 apolipoprotein A-I 7 25.5 415 17.6

2165 P00738 haptoglobin 10 19.5 522 0.031

2307 P01023 alpha-2-macroglobulin 24 21.4 1488 0.032

2498 P00738 haptoglobin 9 16.0 447 0.027

2509 P27169 paraoxonase/arylesterase 1 5 18.3 309 20.4

2513 P00738 haptoglobin 4 6.9 241 0.009

2515 P00739 haptoglobin-related protein 2 3.7 82 0.022

2529 P02652 apolipoprotein A-II 3 21.0 140 25.6

2534 P00734 prothrombin 6 11.7 380 17.8

2536 P06727 apolipoprotein A-IV 12 33.1 661 0.019

2559 P00738 haptoglobin 5 10.8 306 0.025

2571 P00738 haptoglobin 10 17.5 513 0.022

2573 P00738 haptoglobin 10 15.3 543 0.021

Page 9: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

0 mM NaCl elute

spot number accession

protein name number of sequence MASCOT fold

number matched peptides coverage (%) score difference

720 P00738 haptoglobin 5 12.1 279 12.2

745 P10909 clusterin 8 18.0 354 10.8

1205 P00738 haptoglobin 13 24.4 662 0.022

1452 P00738 haptoglobin 10 18.7 593 0.018

1509 P00738 haptoglobin 10 22.7 543 0.021

1541 P00738 haptoglobin 11 19.0 605 0.025

1543 P00738 haptoglobin 8 12.3 445 0.023

1545 P00738 haptoglobin 6 8.1 326 0.019

1549 P00739 haptoglobin-related protein 2 3.7 152 0.020

1551 P00738 haptoglobin 13 26.6 722 0.023

1562 P00738 haptoglobin 15 31.3 785 0.027

1570 P10909 clusterin 4 10.9 174 10.8

100 mM NaCl elute

spot number accession

protein name number of sequence MASCOT fold

number matched peptides coverage (%) score difference

1034 Q15848 adiponectin 3 21.7 167 20.6

1050 P01009 alpha-1-antitrypsin 8 19.6 402 22.6

1393 P02787 serotransferrin 14 21.9 874 0.027

1526 P05090 apolipoprotein D 2 12.7 87 19.8

1648 P02787 serotransferrin 16 22.3 922 0.025

1651 P02787 serotransferrin 18 28.4 1218 0.019

1657 P02787 serotransferrin 17 25.8 1064 0.022

1675 P02787 serotransferrin 18 28.4 1055 0.023

1684 P05090 apolipoprotein D 2 12.7 78 24.8

1689 P05090 apolipoprotein D 2 12.7 86 20.6

1707 P25311 zinc-alpha-2-glycoprotein 14 46.1 713 0.026

150 mM NaCl elute

spot accession protein name

number of sequence MASCOT fold

number number matched peptides coverage (%) score difference

581 P04217 alpha-1B-glycoprotein 16 29.5 774 0.038

586 P04217 alpha-1B-glycoprotein 16 23.8 565 0.031

846 P01009 alpha-1-antitrypsin 87 56.9 1587 0.043

860 P01009 alpha-1-antitrypsin 114 59.1 1709 0.032

879 P01009 alpha-1-antitrypsin 17 42.8 778 0.035

1085 P15169 carboxypeptidase N catalytic chain 4 13.1 250 22.9

1312 Q15848 adiponectin 5 29.5 222 22.6

1359 P05090 apolipoprotein D 2 12.7 92 18.7

1506 P00739 haptoglobin-related protein 6 4.3 194 0.032

Page 10: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

1562 P00738 haptoglobin 8 6.9 201 0.042

2092 O75636 ficolin-3 5 17.7 242 22.7

200 mM NaCl elute

spot accession protein name

number of sequence MASCOT fold

number number matched peptides coverage (%) score difference

899 Q15485 ficolin-2 3 14.7 193 13.2

909 P10909 clusterin 9 18.7 465 13.2

984 Q15848 adiponectin 4 29.5 198 20.9

1470 P02766 transthyretin 7 63.3 375 0.038

1492 P10909 clusterin 8 18.5 369 13.6

1519 P10909 clusterin 9 21.8 461 15.4

1926 P02647 apolipoprotein A-I 7 32.2 465 0.020

1942 P02647 apolipoprotein A-I 7 32.2 456 0.035

1953 P02766 transthyretin 5 54.4 237 0.039

1960 P02766 transthyretin 16 65.3 568 0.035

2005 P02647 apolipoprotein A-I 3 13.5 241 0.033

2007 P02766 transthyretin 8 50.3 236 0.039

250 mM NaCl elute

spot accession protein name

number of sequence MASCOT fold

number number matched peptides coverage (%) score difference

914 P00450 ceruloplasmin 7 4.1 216 53.5

915 P00450 ceruloplasmin 7 4.1 226 32.5

983 P02768 albumin 25 24.6 1066 0.068

1192 P00738 haptoglobin 6 6.9 199 0.033

1763 P06727 apolipoprotein A-IV 16 39.1 783 0.065

1764 P00738 haptoglobin 10 18.2 441 0.055

1 M NaCl elute

spot accession protein name

number of sequence MASCOT fold

number number matched peptides coverage (%) score difference

394 P00450 ceruloplasmin 41 34.8 1648 21.1

815 P00742 coagulation factor X 8 10.2 238 0.116

1333 P00450 ceruloplasmin 6 5.5 218 212.1

1935 Q06033 inter-alpha-trypsin inhibitor

38 26.1 1135 0.042 heavy chain H3

2119 P00450 ceruloplasmin 15 13.1 599 26.2

2135 P00738 haptoglobin 2 6.2 105 0.128

1)Spot numbers refer to those in Figure 5. 2)Accession numbers of proteins and protein name were derived from Swiss-Prot and NCBI nonredundant datebases. 3)Percentage of the number of the identified amino acids per those of total ones. 4)MASCOT score for the identified proteins based on the peptide ions score (P<0.05) (http://www.matrixscience.com).

Page 11: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

5)The ratio of intensity of protein spots between ProteoMiner treated and ProteoMiner not-treated samples.

Page 12: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

Supplementary table 6 Detailed data of identified proteins

S

po

ts

N

o.

1)

R

an

k

Acc

essi

on

No.

2)

pr

ote

in

ID

2)

Identifie

d

protein

2)

p

I

(c

al

)

3)

M

W

(ca

l)

(D)

3)

Pr

ote

in

sco

re

4)

Pep

tide

ma

tch

es

Seq

uen

ce

cov

era

ge

(%)

5)

Io

n

ch

ar

ge

sta

te

(+)

MZ

(ob

s) 6)

Mas

s

(obs

) 7)

Mas

s

(calc

) 8)

Del

ta

9)

M

is

s

10)

Ma

sco

t

ion

s

sco

re

11)

Peptide sequence

Modi

ficati

on

12

50 1

P04

004

VT

NC

Vitronect

in

5.

5

5

55

06

9

18

2 3 9.0 2

712.

161

1

1422

.307

6

1421

.646

3

0.6

61

3

0 77.

66 FEDGVLDPDYPR

1

P04

004

VT

NC

Vitronect

in

5.

5

5

55

06

9

18

2 3 9.0 2

824.

489

1

1646

.963

6

1645

.81

1.1

53

6

0 54.

82 DVWGIEGPIDAAFTR

1

P04

004

VT

NC

Vitronect

in

5.

5

5

55

06

9

18

2 3 9.0 3

556.

542

2

1666

.604

8

1665

.768

2

0.8

36

6

0 52.

49 DWHGVPGQVDAAMAGR

12

66 1

P04

004

VT

NC

Vitronect

in

5.

5

5

55

06

9

12

7 2 6.5 2

824.

229

2

1646

.443

8

1645

.81

0.6

33

8

0 74 DVWGIEGPIDAAFTR

1

P04

004

VT

NC

Vitronect

in

5.

5

5

55

06

9

12

7 2 6.5 3

556.

445

2

1666

.313

8

1665

.768

2

0.5

45

6

0 56 DWHGVPGQVDAAMAGR

12

91 1

P04

004

VT

NC

Vitronect

in

5.

5

5

55

06

9

22

0 7 9.0 2

711.

995

7

1421

.976

8

1421

.646

3

0.3

30

5

0 39 FEDGVLDPDYPR

1

P04

004

VT

NC

Vitronect

in

5.

5

5

55

06

9

22

0 7 9.0 2

712.

228

1

1422

.441

6

1421

.646

3

0.7

95

3

0 91 FEDGVLDPDYPR

1

P04

004

VT

NC

Vitronect

in

5.

5

5

55

06

9

22

0 7 9.0 2

824.

221

7

1646

.428

8

1645

.81

0.6

18

8

0 64 DVWGIEGPIDAAFTR

1

P04

004

VT

NC

Vitronect

in

5.

5

5

55

06

9

22

0 7 9.0 2

824.

369

1

1646

.723

6

1645

.81

0.9

13

6

0 61 DVWGIEGPIDAAFTR

1

P04

004

VT

NC

Vitronect

in

5.

5

5

55

06

9

22

0 7 9.0 3

556.

500

2

1666

.478

8

1665

.768

2

0.7

10

6

0 56 DWHGVPGQVDAAMAGR

1

P04

004

VT

NC

Vitronect

in

5.

5

5

55

06

9

22

0 7 9.0 3

561.

862

2

1682

.564

8

1681

.763

1

0.8

01

7

0 68 DWHGVPGQVDAAMAGR

Oxida

tion

(M)

Page 13: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

1

P04

004

VT

NC

Vitronect

in

5.

5

5

55

06

9

22

0 7 9.0 3

561.

881

2

1682

.621

8

1681

.763

1

0.8

58

7

0 42 DWHGVPGQVDAAMAGR

Oxida

tion

(M)

2

P10

909

CL

US Clusterin

5.

8

9

53

03

1

15

3 3 6.9 2

538.

124

1

1074

.233

6

1073

.535

3

0.6

98

4

0 38 IDSLLENDR

2

P10

909

CL

US Clusterin

5.

8

9

53

03

1

15

3 3 6.9 2

559.

436

6

1116

.858

6

1116

.602

6

0.2

56 0 46 TLLSNLEEAK

2

P10

909

CL

US Clusterin

5.

8

9

53

03

1

15

3 3 6.9 2

697.

522

6

1393

.030

6

1392

.688

5

0.3

42

2

0 75 ASSIIDELFQDR

13

22 1

P04

004

VT

NC

Vitronect

in

5.

5

5

55

06

9

11

7 2 5.6 2

712.

189

1

1422

.363

6

1421

.646

3

0.7

17

3

0 58 FEDGVLDPDYPR

1

P04

004

VT

NC

Vitronect

in

5.

5

5

55

06

9

11

7 2 5.6 2

824.

434

7

1646

.854

8

1645

.81

1.0

44

8

0 62 DVWGIEGPIDAAFTR

20

03 1

P0C

0L4

CO

4A

Comple

ment

C4-A

6.

6

5

19

42

47

11

8 4 1.2 1

983.

554

982.

5467

982.

4794

0.0

67

4

0 34 TYNVLDMK

1

P0C

0L4

CO

4A

Comple

ment

C4-A

6.

6

5

19

42

47

11

8 4 1.2 2

492.

392

6

982.

7706

982.

4794

0.2

91

3

0 50 TYNVLDMK

1

P0C

0L4

CO

4A

Comple

ment

C4-A

6.

6

5

19

42

47

11

8 4 1.2 2

500.

544

6

999.

0746

998.

4743

0.6

00

4

0 37 TYNVLDMK

Oxida

tion

(M)

1

P0C

0L4

CO

4A

Comple

ment

C4-A

6.

6

5

19

42

47

11

8 4 1.2 2

719.

259

6

1436

.504

6

1435

.719

5

0.7

85

2

0 71 GLEEELQFSLGSK

1

P0C

0L5

CO

4B

Comple

ment

C4-B

6.

7

3

19

42

12

11

8 4 1.2 1

983.

554

982.

5467

982.

4794

0.0

67

4

0 34 TYNVLDMK

1

P0C

0L5

CO

4B

Comple

ment

C4-B

6.

7

3

19

42

12

11

8 4 1.2 2

492.

392

6

982.

7706

982.

4794

0.2

91

3

0 50 TYNVLDMK

1

P0C

0L5

CO

4B

Comple

ment

C4-B

6.

7

3

19

42

12

11

8 4 1.2 2

500.

544

6

999.

0746

998.

4743

0.6

00

4

0 37 TYNVLDMK

Oxida

tion

(M)

1

P0C

0L5

CO

4B

Comple

ment

C4-B

6.

7

3

19

42

12

11

8 4 1.2 2

719.

259

6

1436

.504

6

1435

.719

5

0.7

85

2

0 71 GLEEELQFSLGSK

Page 14: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

26

64 1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

15

46 101 41.4 1

695.

487

694.

4797

694.

3286

0.1

51

2

0 35 NYAEAK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

15

46 101 41.4 1

880.

546

879.

5387

879.

4338

0.1

04

9

0 43 AEFAEVSK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

15

46 101 41.4 2

464.

527

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2

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1

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768

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9

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31

7

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6

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9

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768

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9

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31

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Page 36: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

1

P02

768

AL

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9

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71

31

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612

2

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8

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Oxida

tion

(M)

1

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768

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8

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8

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Oxida

tion

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Page 37: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

1

P02

768

AL

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Oxida

tion

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tion

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Oxida

tion

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Oxida

tion

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876

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HA

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0

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5

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Oxida

tion

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7

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Page 38: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

2 chain C

region

1 1 7 8 1 7

3

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tion

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Page 39: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

5 V-III

region

BRO

5 2 7 8 6 2

5

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777

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31

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R

5

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448

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Page 40: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

768 BU 9

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Page 41: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

768 BU 9

2

31

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2

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7

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tion

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tion

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Page 42: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

768 BU 9

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Page 43: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

2

P04

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Page 44: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

cytoskele

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3

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Page 46: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

0 cytoskele

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768 BU 9

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.820

8

1638

.775

2

0.0

45

6

0 74 DVFLGMFLYEYAR

Oxida

tion

(M)

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

10

45 23 33.7 3

547.

476

1

1639

.406

5

1638

.930

5

0.4

76 1 59 KVPQVSTPTLVEVSR

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

10

45 23 33.7 2

820.

832

6

1639

.650

6

1638

.930

5

0.7

20

2

1 70 KVPQVSTPTLVEVSR

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

10

45 23 33.7 3

581.

985

8

1742

.935

6

1741

.886

8

1.0

48

8

0 43 HPYFYAPELLFFAK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

10

45 23 33.7 3

634.

026

2

1899

.056

8

1897

.987

9

1.0

68

9

1 44 RHPYFYAPELLFFAK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

10

45 23 33.7 3

682.

932

9

2045

.776

9

2044

.088

1

1.6

88

8

0 46 VFDEFKPLVEEPQNLIK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

10

45 23 33.7 3

890.

004

5

2666

.991

7

2665

.251

6

1.7

4 0 53

LVRPEVDVMCTAFHDNEE

TFLK

Oxida

tion

(M)

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

10

45 23 33.7 3

997.

800

8

2990

.380

6

2989

.332

1

1.0

48

5

0 51 SHCIAEVENDEMPADLPSL

AADFVESK

Oxida

tion

(M)

2 P05 HE Heparin 6. 57 45 10 21.4 2 450. 899. 898. 0.5 0 43 GPLDQLEK

Page 48: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

546 P2 cofactor

2

4

1

20

5

8 537

6

0606 476 84

7

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

45

8 10 21.4 2

466.

115

6

930.

2166

929.

4759

0.7

40

7

0 45 FAFNLYR

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

45

8 10 21.4 2

515.

062

7

1028

.110

8

1027

.566

2

0.5

44

7

0 56 TLEAQLTPR

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

45

8 10 21.4 2

540.

552

7

1079

.090

8

1078

.565

8

0.5

25 0 45 NYNLVESLK

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

45

8 10 21.4 2

540.

696

7

1079

.378

8

1078

.565

9

0.8

13 0 45 SVNDLYIQK

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

45

8 10 21.4 2

561.

124

6

1120

.234

6

1119

.632

8

0.6

01

8

0 37 QFPILLDFK

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

45

8 10 21.4 2

704.

558

2

1407

.101

8

1405

.735

4

1.3

66

5

0 45 YEITTIHNLFR

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

45

8 10 21.4 3

510.

688

8

1529

.044

6

1527

.704

1

1.3

40

5

0 44 FPVEMTHNHNFR

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

45

8 10 21.4 3

652.

039

5

1953

.096

7

1952

.030

9

1.0

65

8

0 61 FTVDRPFLFLIYEHR

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

45

8 10 21.4 2

987.

217

2

1972

.419

8

1971

.892

2

0.5

27

6

0 47 GGETAQSADPQWEQLNN

K

3

P02

790

HE

M

O

Hemope

xin

6.

5

5

52

38

5

26

0 7 12.6 2

565.

749

6

1129

.484

6

1128

.644

4

0.8

40

3

1 34 RLWWLDLK

3

P02

790

HE

M

O

Hemope

xin

6.

5

5

52

38

5

26

0 7 12.6 2

571.

667

2

1141

.319

8

1140

.581

5

0.7

38

3

0 56 GGYTLVSGYPK

3

P02

790

HE

M

O

Hemope

xin

6.

5

5

52

38

5

26

0 7 12.6 2

611.

137

1

1220

.259

6

1219

.598

6

0.6

61

1

0 44 NFPSPVDAAFR

3

P02

790

HE

M

O

Hemope

xin

6.

5

5

52

38

5

26

0 7 12.6 2

743.

004

2

1483

.993

8

1483

.680

6

0.3

13

3

0 64 EWFWDLATGTMK

3 P02 HE Hemope 6. 52 26 7 12.6 2 750. 1499 1499 0.1 0 65 EWFWDLATGTMK Oxida

Page 49: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

790 M

O

xin 5

5

38

5

0 923

2

.831

8

.675

5

56

3

tion

(M)

3

P02

790

HE

M

O

Hemope

xin

6.

5

5

52

38

5

26

0 7 12.6 3

613.

585

1

1837

.733

5

1836

.879

5

0.8

54 0 56 SGAQATWTELPWPHEK

3

P02

790

HE

M

O

Hemope

xin

6.

5

5

52

38

5

26

0 7 12.6 2

919.

875

2

1837

.735

8

1836

.879

5

0.8

56

4

0 66 SGAQATWTELPWPHEK

29

37 1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 1

789.

59

788.

5827

788.

4644

0.1

18

4

0 39 LVTDLTK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 1

880.

464

879.

4567

879.

4338

0.0

22

9

0 34 AEFAEVSK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

464.

548

6

927.

0826

926.

4861

0.5

96

5

0 38 YLYEIAR

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

476.

463

6

950.

9126

950.

4345

0.4

78

1

0 36 DLGEENFK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

481.

163

6

960.

3126

959.

5552

0.7

57

4

0 48 FQNALLVR

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

501.

054

6

1000

.094

6

999.

5964

0.4

98

2

0 71 QTALVELVK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

507.

556

1

1013

.097

6

1012

.591

7

0.5

06 0 95 LVAASQAALGL

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 1

101

7.46

2

1016

.454

7

1016

.529

1

-0.

07

44

0 45 SLHTLFGDK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

509.

605

6

1017

.196

6

1016

.529

1

0.6

67

5

0 41 SLHTLFGDK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

528.

565

2

1055

.115

8

1054

.581

1

0.5

34

8

1 34 KYLYEIAR

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

537.

916

1

1073

.817

6

1073

.535

3

0.2

82

4

1 45 LDELRDEGK

1 P02 AL Albumin 5. 71 12 34 38.6 2 565. 1128 1127 0.6 1 57 KQTALVELVK

Page 50: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

768 BU 9

2

31

7

67 182

2

.349

8

.691

4

58

5

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

575.

627

7

1149

.240

8

1148

.607

7

0.6

33

1

0 48 LVNEVTEFAK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

614.

187

1

1226

.359

6

1225

.597

9

0.7

61

8

1 51 FKDLGEENFK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

656.

841

2

1311

.667

8

1310

.734

7

0.9

33

2

0 50 HPDYSVVLLLR

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 1

134

2.78

1

1341

.773

7

1341

.627

5

0.1

46

2

0 39 AVMDDFAAFVEK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

672.

013

2

1342

.011

8

1341

.627

5

0.3

84

4

0 60 AVMDDFAAFVEK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

679.

931

6

1357

.848

6

1357

.622

4

0.2

26

2

0 69 AVMDDFAAFVEK

Oxida

tion

(M)

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

734.

864

1

1467

.713

6

1466

.835

8

0.8

77

9

1 37 RHPDYSVVLLLR

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 3

490.

355

2

1468

.043

8

1466

.835

8

1.2

08 1 63 RHPDYSVVLLLR

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

756.

585

6

1511

.156

6

1510

.835

5

0.3

21

1

0 73 VPQVSTPTLVEVSR

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 3

504.

981

5

1511

.922

7

1510

.835

5

1.0

87

1

0 43 VPQVSTPTLVEVSR

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

813.

201

2

1624

.387

8

1622

.780

3

1.6

07

6

0 69 DVFLGMFLYEYAR

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

820.

689

6

1639

.364

6

1638

.775

2

0.5

89

4

0 76 DVFLGMFLYEYAR

Oxida

tion

(M)

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 3

547.

554

1

1639

.640

5

1638

.930

5

0.7

1 1 68 KVPQVSTPTLVEVSR

1 P02 AL Albumin 5. 71 12 34 38.6 3 547. 1640 1638 1.1 1 62 KVPQVSTPTLVEVSR

Page 51: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

768 BU 9

2

31

7

67 696

2

.066

8

.930

5

36

3

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

821.

418

6

1640

.822

6

1638

.930

5

1.8

92

2

1 75 KVPQVSTPTLVEVSR

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

828.

386

2

1654

.757

8

1656

.745

3

-1.

98

75

0 41 QNCELFEQLGEYK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

872.

191

7

1742

.368

8

1741

.886

8

0.4

82

1

0 50 HPYFYAPELLFFAK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 3

581.

912

5

1742

.715

7

1741

.886

8

0.8

28

9

0 62 HPYFYAPELLFFAK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 3

682.

892

5

2045

.655

7

2044

.088

1

1.5

67

6

0 37 VFDEFKPLVEEPQNLIK

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 3

888.

824

5

2663

.451

7

2665

.251

6

-1.

8 0 48

LVRPEVDVMCTAFHDNEE

TFLK

Oxida

tion

(M)

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 2

133

2.88

1

2663

.747

4

2665

.251

6

-1.

50

42

0 48 LVRPEVDVMCTAFHDNEE

TFLK

Oxida

tion

(M)

1

P02

768

AL

BU Albumin

5.

9

2

71

31

7

12

67 34 38.6 3

996.

837

8

2987

.491

6

2989

.332

1

-1.

84

05

0 46 SHCIAEVENDEMPADLPSL

AADFVESK

Oxida

tion

(M)

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

54

0 11 25.7 2

450.

551

1

899.

0876

898.

476

0.6

11

7

0 52 GPLDQLEK

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

54

0 11 25.7 2

466.

189

6

930.

3646

929.

4759

0.8

88

7

0 46 FAFNLYR

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

54

0 11 25.7 2

515.

022

2

1028

.029

8

1027

.566

2

0.4

63

7

0 53 TLEAQLTPR

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

54

0 11 25.7 2

540.

548

6

1079

.082

6

1078

.565

9

0.5

16

8

0 56 SVNDLYIQK

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

54

0 11 25.7 2

561.

443

2

1120

.871

8

1119

.632

8

1.2

39 0 39 QFPILLDFK

2 P05 HE Heparin 6. 57 54 11 25.7 2 704. 1406 1405 0.5 0 49 YEITTIHNLFR

Page 52: downloads.hindawi.comdownloads.hindawi.com/journals/ijpro/2011/739615.f1.pdf · Legends for supplementary tables and figures Supplementary table 1 Recovery rate of protein samples

546 P2 cofactor

2

4

1

20

5

0 169

2

.323

8

.735

4

88

5

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

54

0 11 25.7 3

510.

538

5

1528

.593

7

1527

.704

1

0.8

89

6

0 47 FPVEMTHNHNFR

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

54

0 11 25.7 3

652.

231

9

1953

.673

9

1952

.030

9

1.6

43 0 74 FTVDRPFLFLIYEHR

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

54

0 11 25.7 2

987.

268

2

1972

.521

8

1971

.892

2

0.6

29

6

0 72 GGETAQSADPQWEQLNN

K

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

54

0 11 25.7 3

106

8.58

3

3202

.727

2

3202

.592

9

0.1

34

3

0 48 HQGTITVNEEGTQATTVT

TVGFMPLSTQVR

2

P05

546

HE

P2

Heparin

cofactor

2

6.

4

1

57

20

5

54

0 11 25.7 3

107

4.47

7

3220

.409

2

3218

.587

8

1.8

21

4

0 58 HQGTITVNEEGTQATTVT

TVGFMPLSTQVR

Oxida

tion

(M)

3

P02

790

HE

M

O

Hemope

xin

6.

5

5

52

38

5

41

9 10 18.0 2

565.

755

7

1129

.496

8

1128

.644

4

0.8

52

5

1 44 RLWWLDLK

3

P02

790

HE

M

O

Hemope

xin

6.

5

5

52

38

5

41

9 10 18.0 1

114

1.54

1

1140

.533

7

1140

.581

5

-0.

04

78

0 43 GGYTLVSGYPK

3

P02

790

HE

M

O

Hemope

xin

6.

5

5

52

38

5

41

9 10 18.0 2

571.

436

2

1140

.857

8

1141

.624

4

-0.

76

65

0 46 QGHNSVFLIK

3

P02

790

HE

M

O

Hemope

xin

6.

5

5

52

38

5

41

9 10 18.0 2

571.

637

6

1141

.260

6

1140

.581

5

0.6

79

1

0 64 GGYTLVSGYPK

3

P02

790

HE

M

O

Hemope

xin

6.

5

5

52

38

5

41

9 10 18.0 2

611.

107

2

1220

.199

8

1219

.598

6

0.6

01

3

0 37 NFPSPVDAAFR

3

P02

790

HE

M

O

Hemope

xin

6.

5

5

52

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Supplemental Table 7 Reported concentration of identified proteins and references normal concentration References

protein name μg/ml

adiponectin 2-17 [1] albumin 35000-52000 [2]

alpha-1-antitrypsin 900-2000 [3] alpha-1B-glycoprotein 150-300 [2] alpha-2-macroglobulin 1300-3000 [3]

apolipoprotein A-I 1000-2000 [2] apolipoprotein A-II 190-300 [4] apolipoprotein A-IV 110-220 [5]

apolipoprotein D 60-90 [6] apolipoprotein E 30-60 [7]

carboxypeptidase N 30 [8] ceruloplasmin 190-370 [9]

clusterin 250-420 [10] coagulation factor X 10 [11]

complement C3 900-1800 [2] complement C4-A 25-90 [3]

fibrinogen beta chain 520-1420 [3] fibrinogen gamma chain 490-1340 [3]

ficolin-2 1-12 [12] ficolin-3 3-54 [13]

haptoglobin 200-2000 [14] haptoglobin-related protein 32-41 [14]

inter-alpha-trypsin inhibitor (heavy chain H3) 100-200 [3] paraoxonase/arylesterase 1 58-61 [15]

prothrombin 100 [3] serotransferrin 2000-3600 [2] transthyretin 200-400 [2] vitronectin 240-530 [10]

zinc-alpha-2-glycoprotein 60-80 [16]

References [1] Arita, Y., Kihara, S., Ouchi, N., Takahashi, M., et al., Paradoxical decrease of an adipose-specific protein, adiponectin, in obesity. Biochemical and Biophysical Research Communications 1999, 257, 79-83. [2] Hortin, G. L., The MALDI-TOF mass spectrometric view of the plasma proteome and peptidome. Clinical Chemistry 2006, 52, 1223-1237. [3] Hortin, G. L., Sviridov, D., Anderson, N. L., High-abundance polypeptides of the human plasma proteome comprising the top 4 logs of polypeptide abundance. Clinical Chemistry 2008, 54, 1608-1616. [4] Luo, J., Liu, B., [ELISA for measurement of human serum apolipoprotein A II]. Hua Xi Yi Ke Da Xue Xue Bao 1994, 25, 229-232.

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[5] Kondo, K., Allan, C., Fidge, N., QUANTITATION OF APOLIPOPROTEIN-A-IV IN HUMAN-PLASMA USING A COMPETITIVE ENZYME-LINKED IMMUNOSORBENT-ASSAY. Journal of Lipid Research 1989, 30, 939-944. [6] Cheung, M. C., Albers, J. J., CHARACTERIZATION OF LIPOPROTEIN PARTICLES ISOLATED BY IMMUNOAFFINITY CHROMATOGRAPHY - PARTICLES CONTAINING A-I AND A-II AND PARTICLES CONTAINING A-I BUT NO A-II. Journal of Biological Chemistry 1984, 259, 2201-2209. [7] Schiele, F., De Bacquer, D., Vincent-Viry, M., Beisiegel, U., et al., Apolipoprotein E serum concentration and polymorphism in six European countries: the ApoEurope Project. Atherosclerosis 2000, 152, 475-488. [8] Matthews, K. W., Mueller-Ortiz, S. L., Wetsel, R. A., Carboxypeptidase N: a pleiotropic regulator of inflammation. Molecular Immunology 2004, 40, 785-793. [9] Kim, C. H., Park, J. Y., Kim, J. Y., Choi, C. S., et al., Elevated serum ceruloplasmin levels in subjects with metabolic syndrome: A population-based study. Metabolism-Clinical and Experimental 2002, 51, 838-842. [10] Hogasen, K., Mollnes, T. E., Tschopp, J., Harboe, M., QUANTITATION OF VITRONECTIN AND CLUSTERIN - PITFALLS AND SOLUTIONS IN ENZYME IMMUNOASSAYS FOR ADHESIVE PROTEINS. Journal of Immunological Methods 1993, 160, 107-115. [11] Kalafatis, M., Egan, J. O., VantVeer, C., Cawthern, K. M., Mann, K. G., The regulation of clotting factors. Critical Reviews in Eukaryotic Gene Expression 1997, 7, 241-280. [12] Munthe-Fog, L., Hummelshoj, T., Hansen, B. E., Koch, C., et al., The impact of FCN2 polymorphisms and haplotypes on the ficolin-2 serum levels. Scandinavian Journal of Immunology 2007, 65, 383-392. [13] Munthe-Fog, L., Hummelshoj, T., Ma, Y. J., Hansen, B. E., et al., Characterization of a polymorphism in the coding sequence of FCN3 resulting in a Ficolin-3 (Hakata antigen) deficiency state. Molecular Immunology 2008, 45, 2660-2666. [14] Kujiraoka, T., Oka, T., Ishihara, M., Egashira, T., et al., A sandwich enzyme-linked immunosorbent assay for human serum paraoxonase concentration. Journal of Lipid Research 2000, 41, 1358-1363. [15] Kujiraoka, T., Oka, T., Ishihara, M., Egashira, T., et al., A sandwich enzyme-linked immunosorbent assay for human serum paraoxonase concentration. Journal of Lipid Research 2000, 41, 1358-1363. [16] Yilmaz, Y., Yonal, O., Eren, F., Kurt, R., et al., Serum zinc-α2-glycoprotein concentrations in patients with non-alcoholic fatty liver disease. Clin Chem Lab Med 2011, 49, 93-97.

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Supplementary figure 1

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Supplementary figure 2