kinase activity of mutant lrrk2 mediates neuronal toxicity

3
Kinase activity of mutant LRRK2 mediates neuronal toxicity Wanli W Smith 1 , Zhong Pei 1 , Haibing Jiang 1 , Valina L Dawson 2–5 , Ted M Dawson 2,4,5 & Christopher A Ross 1,2,5 Mutations in the the leucine-rich repeat kinase-2 (LRRK2) gene cause autosomal-dominant Parkinson disease and some cases of sporadic Parkinson disease. Here we found that LRRK2 kinase activity was regulated by GTP via the intrinsic GTPase Roc domain, and alterations of LRRK2 protein that reduced kinase activity of mutant LRRK2 correspondingly reduced neuronal toxicity. These data elucidate the pathogenesis of LRRK2-linked Parkinson disease, potentially illuminate mechanisms of sporadic Parkinson disease and suggest therapeutic targets. LRRK2, a complex protein of the ROCO family, contains both the predicted kinase effector domain (MAPKKK) and the GTP-binding regulatory domain (ROC-COR) 1,2 . The most common mutation, G2019S in the MAPKKK domain, contributes to 5–6% of all cases of autosomal-dominant Parkinson disease as well as to 1–2% of cases of sporadic Parkinson disease 3–7 . G2019 is part of a highly conserved DYG motif (2,017–1,019 in LRRK2) at the activation segment of the MAPKKK domain of LRRK2 (ref. 8). Parkinson disease–linked LRRK2 mutants augment kinase activity 9–11 . Neuronal loss is a key feature of both familial and sporadic Parkinson disease, and individuals with LRRK2 mutations exhibit neuronal degeneration in the brain 2 . Mutant LRRK2 causes neuronal toxicity 12 . However, the relation among LRRK2 kinase activity, GTP regulation and toxicity is unknown. Using the ‘Prosite’ bioinformatic program and site mutagenesis, we generated constructs predicted to alter the kinase activity of mutant (G2019S and R1441C) LRRK2, including D1994N (DN), in which the predicted proton acceptor is abolished, K1906A (KA), in which a predicted ATP binding site is abolished, and DY2017-2018AL (AL), in which the predicted DYG motif is altered. D1994N and DY2017- 2018AL mutations markedly reduced the kinase activity of mutant LRRK2, and the K1906A mutation slightly decreased it (Fig. 1), possibly reflecting the involvement of other functional ATP binding sites. Notably, D1994N and DY2017-2018AL mutations correspond- ingly reduced (and K1906A slightly reduced) mutant LRRK2-induced toxicity in human neuroblastoma SH-SY5Y cells and in primary neurons (Fig. 2af ). These results indicate that kinase activity of mutant LRRK2 is critical for neuronal toxicity. The Roc domain of LRRK2 comprises conserved motifs for GTPase activity. To determine whether LRRK2 can bind GTP, we conducted a GTP-binding assay using sepharose-coupled GTP. WT-LRRK2 bound to GTP-sepharose and was inhibited by an excess amount of GDP or GTP but not ATP (Fig. 3a). G2019S-LRRK2 behaved in a similar fashion (Fig. 3b). We mutated the P-loop (refs. 13–15) in the potential nucleotide-binding pocket of the Roc domain, by replacing lysine 1,347 with alanine. LRRK2-K1347A did not bind appreciably to GTP- sepharose (Fig. 3b). GTP-gS led to an approximate 2- to 4-fold autophosphorylation of both wild-type and G2019S-LRRK2 (Fig. 3c), but GDP binding had no marked effect (Fig. 3c). LRRK2- K1347A, which is devoid of GTP binding activity, could not be activated by GTP-gS(Fig. 3d), suggesting that a functional Roc WB:Flag IP: Flag 32 P WB: Flag Input: WB:Flag IP: Flag 32 P WB: Flag Input: Vector Vector G2019S-AL G2019S-D1994N G2019S-K1906A WT-LRRK2 G2019S R1441C-AL R1441C-D1994N WT-LRRK2 R1441C R1441C-K1906A AL WT-LRRK2 Unaltered K1906A D1994N AL WT-LRRK2 Unaltered K1906A D1994N R1441C * * * * 250 200 150 100 50 0 Relative kinase activity (%) Relative kinase activity (%) G2019S 400 300 200 100 0 a b d c Figure 1 Alteration of the key residues of LRRK2 reduces its kinase activity in an autophosphorylation assay. (ad) Immunoprecipitated samples from HEK-293T cells transfected with Flag-LRRK2 were incubated with [g- 32 P]ATP for 90 min, subjected to SDS–polyacrylamide gel electrophoresis (SDS-PAGE) and blotted onto polyvinylidene difluoride (PVDF) membranes. The samples were then imaged using a phosphoimaging system (a,c). The incorporation of [g- 32 P]ATP into LRRK2 protein was decreased with alteration of key residues. (b,d) Quantitation of phosphorylation of mutant or altered LRRK2 normalized to phosphorylation of wild-type LRRK2 (five independent experiments). *P o 0.05 (one-way analysis of variance, ANOVA) compared to the phosphorylation of G2019S-LRRK2 (b) and R1441C-LRRK2 (d). Received 22 May; accepted 1 September; published online 17 September 2006; doi:10.1038/nn1776 1 Department of Psychiatry, Division of Neurobiology, 2 Departments of Neuroscience and Neurology, 3 Department of Physiology, 4 Institute For Cell Engineering and 5 Program in Cellular and Molecular Medicine, Johns Hopkins University School of Medicine, CMSC 8-121, 600 North Wolfe Street, Baltimore, Maryland 21287, USA. Correspondence should be addressed to C.A.R. ([email protected]) or W.W.S. ([email protected]). NATURE NEUROSCIENCE VOLUME 9 [ NUMBER 10 [ OCTOBER 2006 1231 BRIEF COMMUNICATIONS © 2006 Nature Publishing Group http://www.nature.com/natureneuroscience

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Kinase activity of mutant LRRK2mediates neuronal toxicityWanli W Smith1, Zhong Pei1, Haibing Jiang1, Valina L Dawson2–5,Ted M Dawson2,4,5 & Christopher A Ross1,2,5

Mutations in the the leucine-rich repeat kinase-2 (LRRK2)

gene cause autosomal-dominant Parkinson disease and some

cases of sporadic Parkinson disease. Here we found that

LRRK2 kinase activity was regulated by GTP via the intrinsic

GTPase Roc domain, and alterations of LRRK2 protein that

reduced kinase activity of mutant LRRK2 correspondingly

reduced neuronal toxicity. These data elucidate the

pathogenesis of LRRK2-linked Parkinson disease, potentially

illuminate mechanisms of sporadic Parkinson disease and

suggest therapeutic targets.

LRRK2, a complex protein of the ROCO family, contains both thepredicted kinase effector domain (MAPKKK) and the GTP-bindingregulatory domain (ROC-COR)1,2. The most common mutation,G2019S in the MAPKKK domain, contributes to 5–6% of all casesof autosomal-dominant Parkinson disease as well as to 1–2% ofcases of sporadic Parkinson disease3–7. G2019 is part of a highlyconserved DYG motif (2,017–1,019 in LRRK2) at the activationsegment of the MAPKKK domain of LRRK2 (ref. 8). Parkinsondisease–linked LRRK2 mutants augment kinase activity9–11. Neuronalloss is a key feature of both familial and sporadic Parkinson disease,and individuals with LRRK2 mutations exhibit neuronal degenerationin the brain2. Mutant LRRK2 causes neuronal toxicity12. However,the relation among LRRK2 kinase activity, GTP regulation and toxicityis unknown.

Using the ‘Prosite’ bioinformatic program and site mutagenesis, wegenerated constructs predicted to alter the kinase activity of mutant(G2019S and R1441C) LRRK2, including D1994N (DN), in which thepredicted proton acceptor is abolished, K1906A (KA), in which a

predicted ATP binding site is abolished, and DY2017-2018AL (AL), inwhich the predicted DYG motif is altered. D1994N and DY2017-2018AL mutations markedly reduced the kinase activity of mutantLRRK2, and the K1906A mutation slightly decreased it (Fig. 1),possibly reflecting the involvement of other functional ATP bindingsites. Notably, D1994N and DY2017-2018AL mutations correspond-ingly reduced (and K1906A slightly reduced) mutant LRRK2-inducedtoxicity in human neuroblastoma SH-SY5Y cells and in primaryneurons (Fig. 2a–f). These results indicate that kinase activity ofmutant LRRK2 is critical for neuronal toxicity.

The Roc domain of LRRK2 comprises conserved motifs for GTPaseactivity. To determine whether LRRK2 can bind GTP, we conducted aGTP-binding assay using sepharose-coupled GTP. WT-LRRK2 boundto GTP-sepharose and was inhibited by an excess amount of GDP orGTP but not ATP (Fig. 3a). G2019S-LRRK2 behaved in a similarfashion (Fig. 3b). We mutated the P-loop (refs. 13–15) in the potentialnucleotide-binding pocket of the Roc domain, by replacing lysine 1,347with alanine. LRRK2-K1347A did not bind appreciably to GTP-sepharose (Fig. 3b). GTP-gS led to an approximate 2- to 4-foldautophosphorylation of both wild-type and G2019S-LRRK2(Fig. 3c), but GDP binding had no marked effect (Fig. 3c). LRRK2-K1347A, which is devoid of GTP binding activity, could notbe activated by GTP-gS (Fig. 3d), suggesting that a functional Roc

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Figure 1 Alteration of the key residues of LRRK2 reduces its kinase activity

in an autophosphorylation assay. (a–d) Immunoprecipitated samples from

HEK-293T cells transfected with Flag-LRRK2 were incubated with [g-32P]ATP

for 90 min, subjected to SDS–polyacrylamide gel electrophoresis (SDS-PAGE)

and blotted onto polyvinylidene difluoride (PVDF) membranes. The samples

were then imaged using a phosphoimaging system (a,c). The incorporation

of [g-32P]ATP into LRRK2 protein was decreased with alteration of key

residues. (b,d) Quantitation of phosphorylation of mutant or altered LRRK2

normalized to phosphorylation of wild-type LRRK2 (five independent

experiments). *P o 0.05 (one-way analysis of variance, ANOVA) compared

to the phosphorylation of G2019S-LRRK2 (b) and R1441C-LRRK2 (d).

Received 22 May; accepted 1 September; published online 17 September 2006; doi:10.1038/nn1776

1Department of Psychiatry, Division of Neurobiology, 2Departments of Neuroscience and Neurology, 3Department of Physiology, 4Institute For Cell Engineering and5Program in Cellular and Molecular Medicine, Johns Hopkins University School of Medicine, CMSC 8-121, 600 North Wolfe Street, Baltimore, Maryland 21287, USA.Correspondence should be addressed to C.A.R. ([email protected]) or W.W.S. ([email protected]).

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domain is required for GTP-induced LRRK2 autophosphorylation.The G2019S-LRRK2 construct with the K1347A alteration also showedreduced neuronal toxicity in SH-SY5Y cells and primary neurons(Fig. 3e,f), further suggesting that GTPase activity regulates kinaseactivity, which mediates the toxicity of mutant LRRK2.

In sum, we provide evidence that LRRK2 is a GTP/GDP-regulatedprotein kinase, combining both the kinase effector and the

GTP-binding regulatory domain in one protein. We identified severalkey amino residues in LRRK2 as critical for kinase activity. Alterationsof key residues of the ROC-COR or the MAPKKK domain reduced thekinase activity of mutant LRRK2 and correspondingly reduced itsneuronal toxicity, consistent with dominant gain-of-function inheri-tance of LRRK2-linked Parkinson disease mediated by altered kinaseactivity. The kinase domain of LRRK2 is homologous to B-RAF kinase,

Figure 3 Binding of GTP to LRRK2 requires the

GTPase-like Roc domain and leads to stimulation

of LRRK2 kinase activity. (a) Flag-wt-LRRK2 was

affinity-purified from lysates of transfected

HEK293T cells, using GTP-sepharose, in theabsence or presence of GTP, ATP or GDP.

Precipitates were resolved by SDS-PAGE and

immunoblotted with anti-Flag. (b) Using a GTP

binding assay similar to a, we found that the wild

type-LRRK2-K1347A and G2019S-LRRK2-

K1347A did not bind to GTP (top). Equal protein

input was controlled by a western blot using anti-

Flag (bottom). (c,d) Top, autoradiographs of

immunoprecipitates from HEK-293T cells

transfected with various LRRK2 constructs,

subjected to autophosphorylation assays in the

presence or absence of 10 mM GTP-gS or GDP

(three independent experiments). Bottom,

quantitation of kinase activity normalized to that

in untreated cell lysates of wt-LRRK2. (e) SH-

SY5Y cells and primary cortical neurons were

cotransfected with pcDNA3.1-GFP and various

LRRK2 constructs, and treated as described inFigure 2b. Relative cell viabilities were quantified.

*P o 0.05 compared to cells cotransfected with G2019S-LRRK2 and GFP. (f) SH-SY5Y cells were cotransfected with various LRRK2 constructs and

treated as described in e, followed by anti-FLAG immunostaining and TUNEL assay. The number of TUNEL-positive cells as a percentage of the total

LRRK2-transfected cells was calculated. & Unaltered construct. ’ Construct with K1347A alteration. *P o 0.05 compared to cells transfected

with G2019S-LRRK2.

Figure 2 Alteration of mutant LRRK2 activity

reduces its neuronal toxicity. (a) Western blots

showing the comparable expression levels of

various altered LRRK2 proteins in SH-SY5Y cells.

(b) SH-SY5Y cells (top) and mouse primary

cortical neurons (bottom) were transfected,

respectively, with Lipofectamine Plus or by

electroporation, along with pcDNA3.1-GFP andvarious constructs (details in Supplementary

Methods online). Green fluorescent protein (GFP)-

positive cells (neurons) with neurites (defined as

continuous extensions twice the diameter of the

cell body) were counted using fluorescence

microscopy. Shown are representative

photomicrographs for each experimental group.

(c,d) Quantitation of cell viability, normalized to

number of cells cotransfected with empty vector

and GFP in three independent experiments.

*P o 0.05 compared to cells expressing

G2019S-LRRK2 and GFP (Student’s t-test).

(e,f) SH-SY5Y cells were cotransfected with

constructs expressing various forms of LRRK2,

and treated as described in b, followed by

immunostaining with an antibody to Flag (anti-

Flag). Then a TdT-mediated X-dUTP nick end

labeling (TUNEL) assay was conducted. The

number of TUNEL-positive cells as a percentageof the total LRRK2-transfected cells was calculated. (e) Representative confocal images of each experimental group. (f) Quantitation of data in e. *P o 0.05

compared to cells transfected with unaltered mutant LRRK2.

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and the mutated G2019 of LRRK2 is equivalent to G595 of B-RAF(ref. 8), suggesting functional analogies between LRRK2 activationin Parkinson disease neurodegeneration and B-RAF kinase activationin cancer. Our findings elucidate the role of LRRK2 kinase activity inneuronal death in LRRK2-linked Parkinson disease and suggestthat modulation of LRRK2 GTPase and kinase activities could betherapeutic targets.

Note: Supplementary information is available on the Nature Neuroscience website.

ACKNOWLEDGMENTSThis work was supported by the US National Institutes of Health, the NationalInstitute of Neurological Disorders and Stroke (R21NS055684-01 and NS38377)and the National Parkinson’s Disease Foundation.

COMPETING INTERESTS STATEMENTThe authors declare that they have no competing financial interests.

Published online at http://www.nature.com/natureneuroscience

Reprints and permissions information is available online at http://npg.nature.com/

reprintsandpermissions/

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