j. c. (clint) sprott department of physics university of wisconsin - madison workshop presented at...

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J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University on July 15, 2004 Time-Series Analysis

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Page 1: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

J. C. (Clint) SprottDepartment of Physics

University of Wisconsin - Madison

Workshop presented at the

2004 SCTPLS Annual Conference

at Marquette University

on July 15, 2004

Time-Series Analysis

Page 2: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Agenda

Introductory lecture

Hands-on tutorial

Strange attractors

– Break –

Individual exploration

Closing comments

Page 3: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Motivation

Many quantities in nature fluctuate in time. Examples are the stock market, the weather, seismic waves, sunspots, heartbeats, and plant and animal populations. Until recently it was assumed that such fluctuations are a consequence of random and unpredictable events. With the discovery of chaos, it has come to be understood that some of these cases may be a result of deterministic chaos and hence predictable in the short term and amenable to simple modeling. Many tests have been developed to determine whether a time series is random or chaotic, and if the latter, to quantify the chaos. If chaos is found, it may be possible to improve the short-term predictability and enhance understanding of the governing process.

Page 4: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

GoalsThis workshop will provide examples of time-series data from real systems as well as from simple chaotic models. A variety of tests will be described including linear methods such as Fourier analysis and autoregression, and nonlinear methods using state-space reconstruction. The primary methods for nonlinear analysis include calculation of the correlation dimension and largest Lyapunov exponent, as well as principal component analysis and various nonlinear predictors. Methods for detrending, noise reduction, false nearest neighbors, and surrogate data tests will be explained. Participants will use the "Chaos Data Analyzer" program to analyze a variety of typical time-series records and will learn to distinguish chaos from colored noise and to avoid the many common pitfalls that can lead to false conclusions. No previous knowledge or experience is assumed.

Page 5: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Precautions More art than science No sure-fire methods Easy to fool yourself Many published false claims Must use multiple tests Conclusions seldom definitive Compare with surrogate data Must ask the right questions “Is it chaos?” too simplistic

Page 6: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Applications

Prediction

Noise reduction

Scientific insight

Control

Page 7: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Examples Weather data Climate data Tide levels Seismic waves Cepheid variable stars Sunspots Financial markets Ecological fluctuations EKG and EEG data …

Page 8: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

(Non-)Time Series Core samples Terrain features Sequence of letters in written text Notes in a musical composition Bases in a DNA molecule Heartbeat intervals Dripping faucet Necker cube flips Eye fixations during a visual task ...

Page 9: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Methods Linear (traditional)

Fourier Analysis Autocorrelation ARMA LPC …

Nonlinear (chaotic) State space reconstruction Correlation dimension Lyapunov exponent Principle component analysis Surrogate data …

Page 10: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Resources

Page 11: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Hierarchy of Dynamical Behaviors

Page 12: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Typical Experimental Data

Time0 500

x

5

-5

Page 13: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Stationarity

Page 14: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Detrending

Page 15: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Detrended

Page 16: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Case Study

Page 17: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

First Return Map

Page 18: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Time-Delayed Embedding Space

Plot x(t) vs. x(t-), x(t-2), x(t-3), …

Embedding dimension is # of delays

Must choose and dim carefully

Orbit does not fill the space

Diffiomorphic to actual orbit

Dim of orbit = min # of variables

x(t) can be any measurement fcn

Page 19: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Measurement Functions

Hénon map: Xn+1 = 1 – 1.4X2 + 0.3Yn

Yn+1 = Xn

Page 20: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Correlation Dimension

D2 = dlogN(r)/dlogr

N(r) rD2

Page 21: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Inevitable Ambiguity

Page 22: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Lyapunov Exponent

= <ln|Rn/R0|>

Rn = R0en

Page 23: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Principal Component Analysisx(t)

Page 24: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

State-space Prediction

Page 25: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Surrogate Data

Original time series

Shuffled surrogate

Phase randomized

Page 26: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

General Strategy

Verify integrity of the data Test for stationarity Look at return maps, etc. Look at autocorrelation function Look at power spectrum Calculate correlation dimension Calculate Lyapunov exponent Compare with surrogate data sets Construct models Make predictions from models

Page 27: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Tutorial using CDA

Page 28: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Types of AttractorsFixed Point Limit Cycle

Torus Strange Attractor

Focus Node

Page 29: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Strange Attractors Limit set as t Set of measure zero Basin of attraction Fractal structure

non-integer dimension self-similarity infinite detail

Chaotic dynamics sensitivity to initial conditions topological transitivity dense periodic orbits

Aesthetic appeal

Page 30: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Individual Exploration using CDA

Page 31: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Practical Considerations Calculation speed Required number of data points Required precision of the data Noisy data Multivariate data Filtered data Missing data Nonuniformly sampled data Nonstationary data

Page 32: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Some General High-Dimensional Models

tiibtiN

i iaatx sincos1

o)(

noise)(1

o)(

itN

ixiaatx

)(1

)(1

o)( jtxN

j ijaiaitN

ixatx

)(1

tanh1

o)( jtxD

j ijaN

i ibbtx

Fourier Series:

Linear Autoregression:

Nonlinear Autogression:

Neural Network:

(ARMA, LPC, MEM…)

(Polynomial Map)

Page 33: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Artificial Neural Network

Page 34: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

Summary

Nature is complex

Simple models may suffice

but

Page 35: J. C. (Clint) Sprott Department of Physics University of Wisconsin - Madison Workshop presented at the 2004 SCTPLS Annual Conference at Marquette University

References

http://sprott.physics.wisc.edu/lec

tures/tsa.ppt

(this presentation)

http://sprott.physics.wisc.edu/cd

a.htm

(Chaos Data Analyzer)

[email protected] (my

email)