integrated drug discovery founded on 18 years of …...ai/ml platform, in depth data analysis, drug...
TRANSCRIPT
Integrated Drug Discovery Founded on 18 Years of Deep Experience and Delivery of Milestones
Version 3.2: 13 Sept 2019
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Target to Lead Generation
Lead Optimization Candidate Selection (IND)
Structural Biology (Protein Science, Crystallography)
Medicinal and Computational Chemistry
Screening & Profiling Early ADMET & PK In vitro / In vivo Pharmacology
Medicinal Chemistry DMPK SBDD (Co-crystallization,
Computational Modelling) Target Engagement & Disease Models Safety Profile and Genotox Preformulation
Integration of Discovery Process Designed for Speed to Milestones…
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Non-GLP & GLP Tox Process Development Scale-up & cGMP API D2M Predictions (WinNonlin)
Disease Biology Expertise, Optimization of Drug Like Properties
Oncology Metabolic Disorder CNS Pain & Inflammation (P&I)
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Deep experience and IT tools to analyse and extract information for next cycle design Cycle
time
Deep understanding of molecular interactions, structure & product properties to enable simultaneous multi-parameter optimisation design
Biochemical ,cellular and in vivo testing. ADME testing
Rapid and efficient synthetic execution
Optimization Cycle Designed for Speed in Decision Making, Bringing it All Together
Supported by Technology Platforms
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Emerging Technologies to Foster Speedy Execution
…accelerating decision making for our clients’ programs
Flow Chemistry unit, faster, safer and more flexible synthesis with increased speed and improved quality
SPR, label free real time detection of bimolecular interactions
RapidFire, high-throughput screening system
AI/ML Platform, in depth data analysis, drug repurposing, target identification and validation
Orbitrap for met ID
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Three Case Studies Showing our Strengths in…
• Speed From no chemical matter to successful IND in 3 years In-silico hit to preclinical candidate in 18 months
• Integration of our technology platforms to deliver with speed Computational chemistry, structural biology, rapid throughput of assays
• Medicinal chemistry design skills Capability to design successful compounds even when no chemical matter is known
• Full integration Integration of disciplines to deliver high quality clinical candidates in a speedy manner RapidFire, high-
throughput screening system
• An AI/ML platform for all disciplines AI/ML Platform, in depth data analysis, drug repurposing, target identification and validation
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Oncology Case Study – First-in-Class Mechanism, Preclinical Candidate in 18 Months…
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Discover orally available small molecules to address unmet medical needs in oncology
Delivered a pre-clinical development candidate for oncology and two other lead series in 18 months
Homology model/ Virtual screening
Rational design+ Structural biological analysis
Pre-clinical development candidateTarget
Objectives
Deliverables
2017 18 Months 2018
synthesis and evaluation
Accelerated execution
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Oncology Case Study– Unmet Need, Delivered to IND Stage…
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Delivered non-steroidal hit (3) and lead series (2) plus a clinical candidate as well as a backup candidate Deliverables
SVP, Endo Pharma “I congratulate the Jubilant and Endo teams on achieving this important milestone. It was their outstanding collaborative work and ingenuity that enabled the successful filing and acceptance of an IND in less than
three years
Target IND3 Years
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SBDD Case Study – Unmet Needs in Metabolic Disorders (GPCR)
• Delivered ahead of contracted timeline• Hits identified from SBDD studies when HTS failed to identify hits, molecule in clinic• 3 Milestones achieved
Delivered Hit series, Lead compounds and one Clinical candidateDeliverables
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Publication: The Discovery, Preclinical, and Early Clinical Development of Potent and Selective GPR40 Agonists for the Treatment of Type 2 Diabetes Mellitus (LY2881835, LY2922083, and LY2922470); J Med Chem. 2016 Dec 22;59(24):10891-10916;
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Oncology: Deep Experience Resulting in 17 Milestones…
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In-vitro assays•Cell free biochemical: TR-FRET, AlphaLISA, ADP-glow
•Target modulation: Autophos, ELISA, alpha-screen, MSD,
Western Blot, flow cytometry, PCR
•Cell Cycle: FACS analysis; Cell migration
•Matrix Invasion: Matrigel and HUVEC
•Proliferation & Apoptosis: Alamar blue, Annexin V,
caspase activation
•Immune modulation: Immune-profiling, T cell proliferation
and co-culture
•Others: FLIPR, ICC, 3-D culture, assay for epigenetic target
In-vivo models
•Orthotopic (Breast, Prostate, SCOT, Glioblastoma)•Syngeneic (B16-F10, CT26 and 4T1)•Matrigel plug angiogenesis
• 25 Programs • Disease pathways /mechanisms
• RTKs, PI3K/AKT, MAPK, enzyme and others• Epigenetics, Kinases, Immuno-Oncology and
GPCRs• Specific tumor types, prostate, NSCLC,
hematological tumors and others
Xenograft (Subcutaneous) models for PK-PD or efficacy
Lung (NCI-H82, HCC827, Calu-6) Breast (MDA-MB-231)
Ovarian (A2780)Colon (HT-29, Colo-205, HCT116; LoVo)
Prostate (PC3, DU-145) Pancreatic (PANC-1; Bx-PC3)
Gastric (MKN-45) Melanoma (A375)
Hematological cancers (MV-4-11, Pfeiffer, CCRF-CEM, MM1.S)
Other tumors (A431, U-87
MG)
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Metabolic Disorders: Expertise in First-in-class Targets with Novel Mechanisms of Action
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In-vitro assays•Assays: Insulin secretion, glucose uptake, glucagon secretion,
incretin release [GLP-1, CCK, PYY, GIP] beta cell protection;
Adipogenesis, adipolysis; Apo B secretion, fatty acid oxidation;
membrane potential; Transporter; assessment of Gene/ Protein
modulation
•Cells: Islet, Hepatocytes, Muscle
•Cell Lines: Min6; STC-1; 3T3L1; C2C12; L6
•Platforms: High Content Imaging; MSD; ELISA; RapidFireLCMS/MS; Simple Western; Western Blot; Immuno-cytochemistry
In-vivo models •Streptozotocin-Type 1 diabetic; STZ-induced diabetic neuropathy; STZ
induced Diabetic Nephropathy
•DIO: body weight, glucose, insulin, lipids, and pair-fed studies
•Genetic:ZDF, ob/ob, db/db
•Incretin and endocrine secretion: [GLP-1] in mice
•Acute and Chronic: OGTT, IPGTT (Glucose & Insulin) in mice and rat
•Acute: malonyl CoA lowering in rats
•Lean diabetic: (STZ + Nicotinamide)
•NASH: DIO plus methacholine deficient diet
• 16 Programs • Milestones achieved - 11 • GPCR’s, Kinases, Enzymes and Ion channels
Recent Publication: A small molecule inhibitor of Nicotinamide N-methyltransferase for the treatment of metabolic disorders; Sci Rep. 2018 Feb 26;8(1):3660;
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Pain and Inflammation (P&I): Focus on immuno-inflammation
In-vivo models
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• 13 Programs • Milestones achieved - 8• Ion channels, GPCR’s, Kinases and Enzymes• Collaborated with top pharmaceuticals and
biotech’s to target various pain pathologies
Recent Publication: Synthetic analogues of the parasitic worm product ES-62 reduce disease development in in vivo models of lung fibrosis; Acta Trop. 2018 Sep;185:212-218;
• Neuropathic Pain models: CCI induced neuropathic pain
in mice and rats , L5/L6 ligation(SNL), SNI in mouse,
Paclitaxel induced pain (cancer), Bone cancer pain, STZ
induced Diabetic Neuropathy;
• Inflammatory Pain models:
Formalin, CFA,
Carrageenan
• Inflammatory Bowel Disease: DSS, TNBS and
oxazalone-induced colitis in mice (acute and chronic)
• Arthritis: Collagen induced
arthritis
• Respiratory and Atopic Allergy Models: Steroid sensitive
and resistant asthma in mice; LPS-induced neutrophilia
in rats
• Fibrosis Models: Lung,
liver, skin, kidney, NAFLD
and NASH
• Others: Psoriasis, EAE (MS model), Uveitis in rabbits,
rats & mice(ocular models)
• PK-PD correlation
In-vitro assays• T-cell proliferation; T- cell migration;
immune (multiplexing, MSD
platform); IKK and NF-κb reporter;
JAK-STAT pathway; Kinase [PI3K,
AKT, P38; MAPK, JNK];
Chemotaxis
• Rat macrophage culture and
multiple cytokine measurement
using MSD technology
• In vitro microglia and astrocyte
culture from rodent brain and
functional
• CGRP release from spinal
neurons, Neurite outgrowth,
neuroprotection and toxicity
• Protein translation, Multiple
unfolding protein response (UPR)
assays
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CNS: Deep Expertise - Neuro-Degeneration, Psychiatry, Neuro-Inflammation
In-vitro assays•In vitro microglia and astrocyte culture from rodent brain and functional (measurement of IL1b, IL6 and TNFa)
•Phospho-tau and Amyloid beta measurement using MSD or ELISA
•CGRP release from spinal neurons
•Neurite outgrowth, neuro-protection and toxicity
•Protein translation
•Multiple unfolding protein response (UPR)
•Several screening platforms covering wide target class
•Numerous cellular using iPSC neurons from AD patients
In-vivo models •Neuro-degeneration: Amyloid beta isoform, total and phospho-tau, UPR signaling, stroke, wire knife employed surgical
•AD mouse model: access to transgenic mice APP, tau and others from Taconic
•Cognition: Novel Object Recognition Task [NORT]
•Psychiatry: Forced swim test
•Neuro-inflammation: Mog induced MS
•Target Engagement: Several ex-vivo binding target modulation
•PK-PD correlation
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• Collaborated with big pharma, biotechs and start-ups
• Worked across spectrum of target classes including Ion Channels, Kinases, Enzymes, Transcription Factors
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Our Talent Base
Overall Ph.D. ratio across Chemistry, Biology, DMPK: approximately 15% and increasing
Researchers with overseas experience at, for example
Pfizer, Bayer, Novartis, ETC Singapore, NCI Frederick, etc.
Max Plank Institute, Lawrence Berkley National Lab., Harvard U., etc.
Recruiting from diverse backgrounds and nationwide in India
Low turnover (10-15%), especially at the Ph.D. level ( <5%)
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Thank You for your Time
Our Values
For More Information: [email protected]
We invite your comments and how can we speed up your discovery…
“Jubilant Biosys is excited to jointly explore your areas of target interest and
how we can complement your efforts to bring your programs to IND and Clinic
quickly”.