install neuron on windows - neuron | for … neuron on windows the example here is for windows 10...
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Install NEURON on WindowsThe example here is for Windows 10
Web search for "git for windows" and install it.
...If you do not already have Python 2.7Install Python 2.7 distribution
Test NEURON + Python
Install NEURONTest by launching neurondemoTest MPI parallel from terminal
but anything >= Windows XP is fine.
(not shown in this example)
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Installing ...
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Installing on 64bit Windows 10 ...
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Run the downloaded file
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Install into selected destination folder
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Useful if expect to launch IPython.
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Install NEURON
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NEURON installed
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Test by double clicking ’NEURON Demo’
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Selecting the ’Release’ button starts a demo.
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’Init&Run’ button runs the simulation
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Exit by pressing ’NEURONMainMenu/File/Quit’
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Test MPI by starting the bash terminal
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MPI works? mpiexec −n 2 nrniv −mpi /c/nrn/test0.hoc
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... but Python not yet installed.
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Anaconda is an excellent distribution. another is Enthought Canopy
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NEURON assumes Python 2.7
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It is a large distribution
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Run.. No need to View
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Looks good. Select ’Next’
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’Just me’ is fine
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I accepted the defaults.
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Takes a fair amount of time to install...
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Anaconda installed
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NEURON works with Python and MPI mpiexec −n 3 nrniv −mpi −python /c/nrn/test0.py
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IPython can import neuron ...but...
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you might first need to copy all the dlls. cp c:/nrn/bin/*.dll c:/nrn/lib/python/neuron
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Conda can install many other packages. E.g. conda install mayavi
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Mayavi is useful for 3−D graphics.
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from mayavi ... ; barchart(density)