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Scientific writingScientific writing
How to write research proposals and papersHow to write research proposals and papers
July 13th, 2010July 13th, 2010
Dr. Luciano Matzkin
Division of Biological Sciences
Section of Ecology, Behavior & Evolution
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OutlineOutline
� Research grant system
� The research proposal
� Research publication system
� Research manuscripts
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Research grant systemResearch grant system
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Funding for researchFunding for research
� Intramural
� Extramural
� Government (local, state & federal)
� National Institutes of Health (NIH)
� National Science Foundation (NSF)
� US Dept. of Agriculture (USDA)
� US Dept of Energy (DOE)
� Private foundations
� Howard Hughes Medical Institute
� Bill and Melinda Gates Foundation
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Funding for graduate studentsFunding for graduate students
� NSF Graduate Research Fellowship (i.e. Predoctoral
Fellowship) (www.nsf.gov/grfp).
� 3 years ($40.5k)
� NIH Ruth L. Kirschstein National Research Service Awards
(NRSA) (http://grants.nih.gov/grants/guide/pa-files/PA-
10-109.html). Other fellowships,
http://grants.nih.gov/training/T_Table.htm.
� 2-5 years
� Ford Foundation
(http://sites.nationalacademies.org/PGA/FordFellowships/
index.htm)
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Trajectory of a proposalTrajectory of a proposal
SubmissionSubmissionInitial
review for
compliance
Initial
review for
compliance
Program officer assigns
reviewers (ad hoc and
panel members)
Program officer assigns
reviewers (ad hoc and
panel members)
Decision is
made to fund
or not fund.
Decision is
made to fund
or not fund.
Panel meets, reads over
reviews and discusses
merits of proposal. Score or
recommendation given.
Panel meets, reads over
reviews and discusses
merits of proposal. Score or
recommendation given.
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Research proposalResearch proposal
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Components of a proposalComponents of a proposal
� Project summary (abstract)
� Project description
� Budget and Budget justification
� Other documents:
� Biographical sketch
� Letters of support
� Resources available
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What reviewers look forWhat reviewers look for
� Does it thematically fit the agency/program?
� Are the questions asked important to the field?
� Is the project likely to succeed?
� Can the questions be answered by the experiments?
� Experimental flaws?
� Overambitious?
� Is there a plan to analyze and interpret results? Contingency plans?
� Do the PIs (Principal Investigators) involved have the capacity to perform the project?
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Project summaryProject summary
� Abstract of the research proposal (usually a page)
�What are the main questions the proposal is
set to answer.
� Very briefly, how are these questions going to
be answered (i.e. what experiments are
planned).
� How do the answers to the proposal questions
fit in the larger context of the field? How does
it relate to the big picture?
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Project descriptionProject description
� Introduction
� Preliminary work
� Project design
� Expected results and implications
� Other sections:
� Broader impacts
�Mentoring plan
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IntroductionIntroduction
�What are the overarching questions in the
field.
�What are some of the resolved or studied
components of the big question.
�What still needs to be resolved.
�What aspects of the study system facilitates the
study of unresolved components. (introduction
to the study system).
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Preliminary workPreliminary work
� This is a the place you show the reviewers that
you have the ability to perform the
experiments.
� Show a track-record of working in the field.
� Could be published work or unpublished pilot
data.
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Project designProject design
� The main component of the proposal.
� How are you going to experimentally test and
try to answer the specific questions you raised
in the introduction.
� Do not need to list every little detail, enough
for the reviewer to understand the experiments
and to assess your proficiency in the field.
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Expected results & implicationsExpected results & implications
� This section can also be incorporated into the
Project Design.
� Here is where you show the reviewer that you
thought about the possible results.
� How are you going to analyze the data?
� If you get X what does it mean with respects to
the specific question? What if you get Y?
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Guide to proposal successGuide to proposal success
� Read the instructions several times and very carefully.
� Give yourself a “deadline” two weeks before true deadline.
� Have it read by colleagues/friends in your field and in other fields.
� Do not take rejection personal. The great majority of proposals do not get funded the first time.
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Research publication Research publication
systemsystem
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Publishing your workPublishing your work
� Research which journal would be a better fit for
your manuscript (Impact Score).
� Submit your manuscript (electronically).
� Submit cover letter which briefly summarizes the
merits of the manuscript and list suggested
reviewers (very important).
� Associated editor (AE) will send your paper out
to between ~2-4 investigators.
� Once reviews come back AE will make decision.
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Research manuscriptsResearch manuscripts
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Components of manuscriptComponents of manuscript
� Abstract
� Introduction
�Materials and Methods
� Results
� Discussion
� References
� Figures, Figure Legends and Tables
� Supplementary information
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AbstractAbstract
� Short summary between ~200-400 words
(depends on journal).
� Sentence or two relating to background and
questions.
� ~ 2-3 sentences on experimental design and
description of system.
� ~2-4 sentences on results and study
conclusions.
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IntroductionIntroduction
� Similar to the proposal introduction, but little bit
more narrow in scope.
�What are the overarching questions in the field.
�What are some of the resolved or studied
components of the big question.
�What needs to be resolved and your hypothesis.
� Introduction to the study system.
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Material and MethodsMaterial and Methods
� A good amount of detail, enough that anybody
could repeat experiments and analysis.
� Do not need to add every little detail. (e.g.
primer concentration in the PCR, unless an
“abnormal” amount is used)
� Statistical analysis plan.
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ResultsResults
� Observed results and statistical analysis.
� Just state what you observed and/or analyzed
without any interpretation.
� A good example: “Wing length was
significantly greater (t-Test, P<0.02) in the
northern population relative to the south.”
� A no so good example: “…likely do to the low
resources available, northern population
exhibited larger wings.”
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DiscussionDiscussion
� Interpretation of results. What is the data saying?
� How do the results fit or don’t fit previous studies
and your hypothesis (from intro).
� How do the results of this study fit into the
context of the big picture, implication of results.
� Future directions
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Other materialOther material
� References: Use Endnote or similar software. Easy
to download references (WebofScience) and change
formatting.
� Figures and tables used should be necessary for the
clear understanding of the results and/or analysis.
� Extra information (figures, tables, etc) that are not
essential for the understanding of the manuscript,
but should be present for completeness are placed in
Supplementary Information.
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Helpful suggestionsHelpful suggestions
� Read both primary literature and reviews.
� Always credit ideas and work to rightful author(s).
� Be clear in your writing and have it read by several
friends/colleagues.
� Always keep the reader in mind.
� Look at what has been published in the chosen
journal (for style and emphasis).
� Color figures are nice, but $$$$.
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QuestionsQuestions
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� .