how to deal with complex virus disease problems
DESCRIPTION
Group of emerging plant viruses causing economically significant damage to a broad range of field crops, vegetables, ornamentals, fruits, etc. Viruses can not move by themselves and they need a “safe” vehicle to spread from plant to plant one such is thrips -Naidu A. Rayapati, Presentation at CPMB, TNAU 19th,August 2009TRANSCRIPT
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Dealing with complex virus disease problems
a case of Tospovirus Diseases in Vegetables
Naidu A. RayapatiDepartment of Plant PathologyWashington State UniversityIrrigated Agriculture Research & Extension CenterProsser, WA 99350, [email protected]
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An overview
Thrips vectors
Tospoviruses
Topics
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Thrips : Greek word for “wood worms”
Thrips : a plural noun
Each individual is “a thrips” like the word “sheep”
Thrips: What are they?
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What are Tospoviruses ?
Type member: Tomato spotted wilt virus
Group of emerging plant viruses causing economically significant damage to a broad range of field crops, vegetables, ornamentals, fruits, etc.
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Thrips play a vital role in the spread of tospoviruses
Tospovirus
Thrips Host
The virus disease triangle
• Viruses can not move by themselves
• They need a “safe” vehicle to spread from plant to plant• Thrips control strategies may be a better option to disrupt the disease triangle
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Thrips as vectors of viruses
• As vectors directly transmitting virusese.g. Tospoviruses in vegetables, field crops
and ornamentals
• As carriers of pollen containing virusese.g. certain other viruses (Tobacco streak virus)
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General features of thrips• Small size
- difficult to detect • Polyphagous
- feed on a broad range of plant species
- feed on different parts of the plant (pollen, flower structures, leaves, stems)
• Show habitat infidelity- extraordinary ability to adapt- can expand geographic range- can spread to new crops
• Have superior reproductive output - produce many off springs
• Have propensity to ‘overwinter’ on a broad range of plant species - survive through out the year
• Vectors of viruses- Spread virus diseases
Source: Zenkoko Noson, Kyoiku Kyoiku Co. Ltd, Japan.
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• Approximately 5500 species of thrips described
• About 40% known to feed on higher plants
• The rest exploits lower plant families (gymnosperms, ferns and fungi)
• Some species are predatory
Thrips
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• 12 species in 4 genera
• About 0.16% (12/5500) of the known Thysanoptera
Family: Thripidae
Order: Thysanoptera
Thrips species implicated in Thrips species implicated in tospovirus transmissiontospovirus transmission
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Thrips species implicated in Thrips species implicated in tospovirus transmissiontospovirus transmission
Frankliniella occidentalisFrankliniella occidentalisF. fuscaF. fuscaF. bispinosaF. bispinosaF. schultzeiF. schultzeiF. intosaF. intosaF. zucchiniF. zucchiniF. schultzeiF. schultzei
Thrips palmiThrips palmiT. tabaciT. tabaciT. setosusT. setosusScirtothrips dorsalisScirtothrips dorsalisCeratothrips claratrisCeratothrips claratris
12 species
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Thrips species implicated in tospovirus Thrips species implicated in tospovirus transmissiontransmission
Frankliniella occidentalis*Frankliniella occidentalis*F. fusca*F. fusca*F. bispinosa*F. bispinosa*F. schultzeiF. schultzeiF. intosaF. intosaF. zucchiniF. zucchiniF. schultzeiF. schultzei
Thrips tabaci*Thrips tabaci*T. palmi*T. palmi*T. setosusT. setosusScirtothrips dorsalisScirtothrips dorsalisCeratothrips claratrisCeratothrips claratris
*Major vectors in the USA*Present in the US, but vectoring capacity not clear
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• F. occidentalis (Western flower thrips)Polyphagous (many fruits, vegetables, ornamentals, seed crops, cotton)
Throughout USA
• F. fusca (Tobacco thrips) Polyphagous (common in grasslands, peanut, tobacco, cotton)
South & Southeastern USA
• T. tabaci (Onion thrips) Polyphagous (onion, cabbage, tobacco, cotton, vegetables and ornamentals)
Throughout USA
Major vector thrips in the USA
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Thrips species implicated in Thrips species implicated in tospovirus transmissiontospovirus transmission
Frankliniella occidentalisFrankliniella occidentalis****F. fuscaF. fuscaF. bispinosaF. bispinosaF. schultzeiF. schultzei**F. intosaF. intosaF. zucchiniF. zucchiniF. schultzeiF. schultzei
Thrips palmiThrips palmi**T. tabaciT. tabaci**T. setosusT. setosusScirtothrips dorsalisScirtothrips dorsalis**Ceratothrips claratrisCeratothrips claratris**
*Present in Asia-Pacific Region**Present in some countries of Asia-Pacific Region
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TSWV = Tomato spotted wilt virusGRSV = Groundnut ringspot virusTCSV = Tomato chlorotic spot virusCSMV = Chrysanthemum stem necrosis virusZLCV = Zucchini lethal chlorosis virusINSV = Impatiens necrotic spot virusPBNV = Peanut bud necrosis virusWSMV = Watermelon silver mottle virusWBNV = Watermelon bud necrosis virusCaCV = Capsicum chlorosis virusMYSV = Melon yellow spot virusIYSV = Iris yellow spot virusTYRV = Tomato yellow fruit ring virusPYSV = Peanut yellow spot virusPCFV = Peanut chlorotic fanspot virusCCSV = Calla lily chhlrotic spot virus
List of characterized tospoviruses
As of 2007
16
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6 virusesdistributed primarily
in Americas
11 virusesdistributed primarily
in Eurasia
TCSV GRSV
TSWV CSNV
ZLCV INSV
TYRV IYSV MYSV TZSV CCSV
CaCV WSMoV WBNV
GBNV GCFSV GYSV100
9296
90
100
100
100
100100
100
74
6371
100
0.1 Some exceptionsTSWV - in Europe, Africa, Australia & JapanIYSV - in the Americas and Australia
Tospoviruses – a global view
17 viruses
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Southeast Southeast AsiaAsia
CaCVCaCV WSMVWSMV MYSVMYSV PCFVPCFV
Geographic structuring of tospoviruseswithin South & Southeast Asia
S. AsiaPBNVWBNVPYSVIYSV
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Thrips species implicated in Thrips species implicated in tospovirus transmissiontospovirus transmission
Frankliniella occidentalisFrankliniella occidentalisF. fuscaF. fuscaF. bispinosaF. bispinosaF. schultzeiF. schultzeiF. intosaF. intosaF. zucchiniF. zucchiniF. schultzeiF. schultzei
Thrips palmiThrips palmiT. tabaciT. tabaciT. setosusT. setosusScirtothrips dorsalisScirtothrips dorsalisCeratothrips claratrisCeratothrips claratris
12 species
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TCSV GRSV
TSWV CSNV
ZLCV INSV
TYRV IYSV MYSV TZSV CCSV
CaCV WSMoV WBNV
GBNV GCFSV GYSV100
9296
90
100
100
100
100100
100
74
6371
100
0.1
Group 1Primary vector
Frankliniella sp.
Group 2Primary vector
Thrips sp.
Group 3Primary vectorScritothrips sp.
Phylogenetic tree - N protein
Association between tospoviruses and thrips vectors
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Peanut bud necrosis virus a threat to tomato sustainability in India
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Peanut bud necrosis virus (PBNV) a major threat to tomato sustainability in India
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Healthy Infected
Peanut bud necrosis virus a threat to tomato sustainability in India
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• affects quality and shelf life
• loss of income
Peanut bud necrosis virus
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Capsicum chlorosis virus in South Asia
Symptoms mimic those produced by PBNV
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Life stages of thrips
Egg
Lar
va I
Lar
va I
I
Pre
pu
pa
Pu
pa
Ad
ult
Ad
ult
• Larvae and adults: feeding stages• Pre-pupa and pupa: non-feeding stages• Gender can not be determined until adult state• Larva - adult = 15-20 days
Western Flower Thrips
Ullman et. al., 1997
♀♂
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Unique among plant viruses II nd instar
larva
Quiescent&
Do not feed
Only adults that acquire virus
as larva can transmit
Symptom expression
Prepupa
Pupa
Adult
Virus acquisition
by larva is crucial
Interdependency between vector life-stage and productive virus transmission
Ist instar larva
Virus replicates & passage occurs from one stage to the otherUllman et. al., 1997
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Tospoviruses• A serious threat to vegetables, ornamentals,
food and cash crops
• ~1000 species of plants in about 70 plant families (dicots & monocots)
• an estimated global yield losses of up to $1 billion
Tomato Peanut
Tobacco
Pepper
Potato
Ornamentals
Onion
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Thrips vector
Tospoviruses multiply in two disparate hosts
Plants Male
Female
Thrips not a vector but a mobile host
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Western flower thrips
Male FemaleMale46%
Female12%
Transmission efficiency
Gender-specific differences in virus transmission
Males are efficient transmitters
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SDS-PAGE ofTSWV particle proteinsElectron micrograph
of TSWV particles
GC
N
GN
TSWV MrDrawing of TSWV particle
150
100
75
50
35
25
15
kDa
M S
L
Tospoviruses have a complex structure
Pleomorphic particles = 80-120 nm size
Replicase
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Tospoviruses have a complex genome
Organization
L-RNA = negative senseM- & S- RNA = Ambisense
NSs N
NSm GN/GC
Replicase8.9 kb
4.8 kb
2.9 kb
L-RNA
S-RNA
M-RNA GC N
GN
• Tri-partite genome: three genomic segments• Hybrid particles: virus-encoded and host-derived
Replicase
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Virus Thrips vectorTomato spotted wilt virus Frankliniella occidentalis
F. fuscaF. intosaF. bispinosaF. schultzeiThrips tabaciT. setosus
Impatiens necrotic spot virus F. occidentalisF. fuscaF. intosaF. schultzei
A tospovirus can be transmitted by more than one thrips vector
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A single species of thrips vector can transmit more than one tospovirus
Thrips vector VirusF. occidentalis Tomato spotted wilt virus
Impatiens necrotic spot virusTomato chlorotic spot virusGroundnut ringspotvirusChrysanthemum stem necrosis virus
T. palmi Peanut bud necrosis virusWatermelon silver mottle virusWatermelon bud necrosis virusMelon yellow spot virusCapsicum chlorosis virusTomato spotted wilt virus ??
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Western flower thrips (WFT)(Frankliniella occidentalis)
Melon thrips (Thrips palmi)
Source: www.eppo.org
• A native to the southwestern USA• Spread through global trade
in ornamental greenhouse plants around the world from mid-1980s
• A native to Southeast Asia• Expanded its geographic
range in 1970s and 80s
Geographic expansion of thrips vectors
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• virus vectors introduced in to new areas
• viruses introduced in to new areas by land, sea and air, via
international trade or accidentally
Viruses and insects do not carry passports
The planetary ecosystem has changed !!!
Global village
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Challenges in controlling tospovirus diseases
Tospoviruses
• broad host range• multiple vector species• evolution of new strains• ability to overcomehost plant resistance
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Vector thrips
• polyphagous & show habitat infidelity• has superior reproductive output• has propensity to ‘overwinter’ on a
broad range of plant species• develop resistance against pesticides
Challenges in controlling tospovirus diseases
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Host plant resistance
Resistance only against TSWV
• Sw-5 resistance gene in tomato against TSWV• Tsw resistance gene in Capsicum against TSWV
Challenges in controlling tospovirus diseases
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Host plant resistance
• No broad-spectrum resistancee.g. CaCV overcame the Sw-5 resistance gene in tomatoe.g CaCV overcame TSWV resistance in
Capsicum chinense accessions PI 152225, PI 159236 and AVRDC 00943
• Resistance to ‘Asian’ tospoviruses not yet knowne.g. is there resistance to PBNV in tomato ?
Challenges in controlling tospovirus diseases
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Challenges in controlling tospovirus diseases
Host plant resistance
• virus-specific• no ‘one-size-fits all’ approach
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Durable resistance is difficult to achieve
due to rapid evolution of resistance-breaking virus strains
K.S. Ravi, Mahyco, India
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biologic chess game !!!
Crop Improvement against tospoviruses
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Management of tospovirus diseases:
an IPM approach• Knowledge about the virus & vector• Diagnostic tools• Ecology and epidemiology• Thrips vector management options• Altering cropping patterns• Deploying tolerant/resistant cultivars• Capacity building
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Integrated Management of Thrips-borne Tospoviruses in Vegetable Cropping Systems
in South Asia and Southeast Asia Region
Funded by Integrated Pest Management Collaborative Research
Support Program (IPM CRSP) of USAID
Global IPM Theme: Insect-transmitted viruses
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“minimize crop losses due to thrips-borne tospoviruses in smallholder vegetable farming systems in South and Southeast Asia through new science and technologies and multidisciplinary global partnerships,and improve nutritional status of people including women and children”
Project Goal
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1. Conduct strategic research on tospoviruses and thrips vectors
2. Carryout applied and adaptive research to deploy ‘eco-friendly’ IPM strategies to control tospovirus diseases
3. Strengthening institutional capacities within host countries to conduct problem-oriented research on virus diseases
(short- and long-term training)
Project Objectives
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Thank You